From 58960c226d2e48dcec4a9b9e4cfcd817cfdb89dd Mon Sep 17 00:00:00 2001 From: Daniel Chang Date: Mon, 15 May 2023 17:51:54 -0400 Subject: [PATCH] fix: update deps (#36) Co-authored-by: dchang --- Manifest.toml | 715 ++++++++++++++++++++++++++++---------------------- 1 file changed, 402 insertions(+), 313 deletions(-) diff --git a/Manifest.toml b/Manifest.toml index 01bd6ac..7bac996 100644 --- a/Manifest.toml +++ b/Manifest.toml @@ -4,11 +4,17 @@ julia_version = "1.8.5" manifest_format = "2.0" project_hash = "3f8acee93d45a4bf9ffe3b6c74fd615053ba67ad" +[[deps.ASL_jll]] +deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] +git-tree-sha1 = "6252039f98492252f9e47c312c8ffda0e3b9e78d" +uuid = "ae81ac8f-d209-56e5-92de-9978fef736f9" +version = "0.1.3+0" + [[deps.AbstractAlgebra]] -deps = ["GroupsCore", "InteractiveUtils", "LinearAlgebra", "MacroTools", "Markdown", "Random", "RandomExtensions", "SparseArrays", "Test"] -git-tree-sha1 = "29e65c331f97db9189ef00a4c7aed8127c2fd2d4" +deps = ["GroupsCore", "InteractiveUtils", "LinearAlgebra", "MacroTools", "Random", "RandomExtensions", "SparseArrays", "Test"] +git-tree-sha1 = "3ee5c58774f4487a5bf2bb05e39d91ff5022b4cc" uuid = "c3fe647b-3220-5bb0-a1ea-a7954cac585d" -version = "0.27.10" +version = "0.29.4" [[deps.AbstractFFTs]] deps = ["ChainRulesCore", "LinearAlgebra"] @@ -18,9 +24,9 @@ version = "1.3.1" [[deps.AbstractMCMC]] deps = ["BangBang", "ConsoleProgressMonitor", "Distributed", "LogDensityProblems", "Logging", "LoggingExtras", "ProgressLogging", "Random", "StatsBase", "TerminalLoggers", "Transducers"] -git-tree-sha1 = "323799cab36200a01f5e9da3fecbd58329e2dd27" +git-tree-sha1 = "a21654aa796bcc993284dace0d17d1022774c0a3" uuid = "80f14c24-f653-4e6a-9b94-39d6b0f70001" -version = "4.4.0" +version = "4.4.1" [[deps.AbstractPPL]] deps = ["AbstractMCMC", "DensityInterface", "Random", "Setfield", "SparseArrays"] @@ -35,9 +41,9 @@ version = "0.4.4" [[deps.Adapt]] deps = ["LinearAlgebra", "Requires"] -git-tree-sha1 = "cc37d689f599e8df4f464b2fa3870ff7db7492ef" +git-tree-sha1 = "76289dc51920fdc6e0013c872ba9551d54961c24" uuid = "79e6a3ab-5dfb-504d-930d-738a2a938a0e" -version = "3.6.1" +version = "3.6.2" [[deps.AdvancedHMC]] deps = ["AbstractMCMC", "ArgCheck", "DocStringExtensions", "InplaceOps", "LinearAlgebra", "LogDensityProblems", "LogDensityProblemsAD", "ProgressMeter", "Random", "Requires", "Setfield", "SimpleUnPack", "Statistics", "StatsBase", "StatsFuns"] @@ -64,10 +70,10 @@ uuid = "b5ca4192-6429-45e5-a2d9-87aec30a685c" version = "0.1.6" [[deps.AlgebraicPetri]] -deps = ["Catlab", "GeneralizedGenerated", "LabelledArrays", "LinearAlgebra", "Requires", "StatsBase"] -git-tree-sha1 = "22dc8fabaca850640dacbfa01a42a1261bcfde93" +deps = ["Catlab", "DataStructures", "GeneralizedGenerated", "LabelledArrays", "LinearAlgebra", "Requires", "StatsBase"] +git-tree-sha1 = "7b07f05fec4e9649ebae8a40b60fbe12d7d004a3" uuid = "4f99eebe-17bf-4e98-b6a1-2c4f205a959b" -version = "0.8.6" +version = "0.8.10" [[deps.ArgCheck]] git-tree-sha1 = "a3a402a35a2f7e0b87828ccabbd5ebfbebe356b4" @@ -91,10 +97,10 @@ uuid = "ec485272-7323-5ecc-a04f-4719b315124d" version = "0.2.0" [[deps.ArrayInterface]] -deps = ["ArrayInterfaceCore", "Compat", "IfElse", "LinearAlgebra", "SnoopPrecompile", "Static"] -git-tree-sha1 = "dedc16cbdd1d32bead4617d27572f582216ccf23" +deps = ["Adapt", "LinearAlgebra", "Requires", "SparseArrays", "SuiteSparse"] +git-tree-sha1 = "c4d9efe93662757bca4cc24df50df5f75e659a2d" uuid = "4fba245c-0d91-5ea0-9b3e-6abc04ee57a9" -version = "6.0.25" +version = "7.4.4" [[deps.ArrayInterfaceCore]] deps = ["LinearAlgebra", "SnoopPrecompile", "SparseArrays", "SuiteSparse"] @@ -102,30 +108,6 @@ git-tree-sha1 = "e5f08b5689b1aad068e01751889f2f615c7db36d" uuid = "30b0a656-2188-435a-8636-2ec0e6a096e2" version = "0.1.29" -[[deps.ArrayInterfaceGPUArrays]] -deps = ["Adapt", "ArrayInterfaceCore", "GPUArraysCore", "LinearAlgebra"] -git-tree-sha1 = "fc114f550b93d4c79632c2ada2924635aabfa5ed" -uuid = "6ba088a2-8465-4c0a-af30-387133b534db" -version = "0.2.2" - -[[deps.ArrayInterfaceOffsetArrays]] -deps = ["ArrayInterface", "OffsetArrays", "Static"] -git-tree-sha1 = "3d1a9a01976971063b3930d1aed1d9c4af0817f8" -uuid = "015c0d05-e682-4f19-8f0a-679ce4c54826" -version = "0.1.7" - -[[deps.ArrayInterfaceStaticArrays]] -deps = ["Adapt", "ArrayInterface", "ArrayInterfaceCore", "ArrayInterfaceStaticArraysCore", "LinearAlgebra", "Static", "StaticArrays"] -git-tree-sha1 = "f12dc65aef03d0a49650b20b2fdaf184928fd886" -uuid = "b0d46f97-bff5-4637-a19a-dd75974142cd" -version = "0.1.5" - -[[deps.ArrayInterfaceStaticArraysCore]] -deps = ["ArrayInterfaceCore", "LinearAlgebra", "StaticArraysCore"] -git-tree-sha1 = "01a9f8e6cfc2bfdd01d333f70b8014a04893103c" -uuid = "dd5226c6-a4d4-4bc7-8575-46859f9c95b9" -version = "0.1.4" - [[deps.ArrayLayouts]] deps = ["FillArrays", "LinearAlgebra", "SparseArrays"] git-tree-sha1 = "4aff5fa660eb95c2e0deb6bcdabe4d9a96bc4667" @@ -135,6 +117,12 @@ version = "0.8.18" [[deps.Artifacts]] uuid = "56f22d72-fd6d-98f1-02f0-08ddc0907c33" +[[deps.Atomix]] +deps = ["UnsafeAtomics"] +git-tree-sha1 = "c06a868224ecba914baa6942988e2f2aade419be" +uuid = "a9b6321e-bd34-4604-b9c9-b65b8de01458" +version = "0.1.0" + [[deps.AxisAlgorithms]] deps = ["LinearAlgebra", "Random", "SparseArrays", "WoodburyMatrices"] git-tree-sha1 = "66771c8d21c8ff5e3a93379480a2307ac36863f7" @@ -149,15 +137,15 @@ version = "0.4.6" [[deps.BandedMatrices]] deps = ["ArrayLayouts", "FillArrays", "LinearAlgebra", "SnoopPrecompile", "SparseArrays"] -git-tree-sha1 = "04f8147bbf7ea9a72f957c9b4095909df3ab21b1" +git-tree-sha1 = "6ef8fc1d77b60f41041d59ce61ef9eb41ed97a83" uuid = "aae01518-5342-5314-be14-df237901396f" -version = "0.17.17" +version = "0.17.18" [[deps.BangBang]] -deps = ["Compat", "ConstructionBase", "Future", "InitialValues", "LinearAlgebra", "Requires", "Setfield", "Tables", "ZygoteRules"] -git-tree-sha1 = "7fe6d92c4f281cf4ca6f2fba0ce7b299742da7ca" +deps = ["Compat", "ConstructionBase", "InitialValues", "LinearAlgebra", "Requires", "Setfield", "Tables"] +git-tree-sha1 = "54b00d1b93791f8e19e31584bd30f2cb6004614b" uuid = "198e06fe-97b7-11e9-32a5-e1d131e6ad66" -version = "0.3.37" +version = "0.3.38" [[deps.Base64]] uuid = "2a0f44e3-6c83-55bd-87e4-b1978d98bd5f" @@ -220,9 +208,9 @@ version = "0.4.2" [[deps.CPUSummary]] deps = ["CpuId", "IfElse", "Static"] -git-tree-sha1 = "a7157ab6bcda173f533db4c93fc8a27a48843757" +git-tree-sha1 = "2c144ddb46b552f72d7eafe7cc2f50746e41ea21" uuid = "2a0fbf3d-bb9c-48f3-b0a9-814d99fd7ab9" -version = "0.1.30" +version = "0.2.2" [[deps.CPUTime]] git-tree-sha1 = "2dcc50ea6a0a1ef6440d6eecd0fe3813e5671f45" @@ -249,39 +237,39 @@ version = "0.5.1" [[deps.Catlab]] deps = ["Colors", "CompTime", "Compose", "DataStructures", "GeneralizedGenerated", "JSON", "LightXML", "LinearAlgebra", "Logging", "MLStyle", "Pkg", "PrettyTables", "Random", "Reexport", "Requires", "SparseArrays", "StaticArrays", "Statistics", "StructEquality", "Tables"] -git-tree-sha1 = "51a3fbc3f3b1d09e081bb682c440c76327a8c765" +git-tree-sha1 = "821d6dcf331981e7c1d6377a6baee112a79a1021" uuid = "134e5e36-593f-5add-ad60-77f754baafbe" -version = "0.14.14" +version = "0.14.17" [[deps.ChainRules]] deps = ["Adapt", "ChainRulesCore", "Compat", "Distributed", "GPUArraysCore", "IrrationalConstants", "LinearAlgebra", "Random", "RealDot", "SparseArrays", "Statistics", "StructArrays"] -git-tree-sha1 = "7d20c2fb8ab838e41069398685e7b6b5f89ed85b" +git-tree-sha1 = "8bae903893aeeb429cf732cf1888490b93ecf265" uuid = "082447d4-558c-5d27-93f4-14fc19e9eca2" -version = "1.48.0" +version = "1.49.0" [[deps.ChainRulesCore]] deps = ["Compat", "LinearAlgebra", "SparseArrays"] -git-tree-sha1 = "c6d890a52d2c4d55d326439580c3b8d0875a77d9" +git-tree-sha1 = "e30f2f4e20f7f186dc36529910beaedc60cfa644" uuid = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4" -version = "1.15.7" +version = "1.16.0" [[deps.ChangesOfVariables]] -deps = ["ChainRulesCore", "LinearAlgebra", "Test"] -git-tree-sha1 = "485193efd2176b88e6622a39a246f8c5b600e74e" +deps = ["LinearAlgebra", "Test"] +git-tree-sha1 = "f84967c4497e0e1955f9a582c232b02847c5f589" uuid = "9e997f8a-9a97-42d5-a9f1-ce6bfc15e2c0" -version = "0.1.6" +version = "0.1.7" [[deps.CloseOpenIntervals]] -deps = ["ArrayInterface", "Static"] -git-tree-sha1 = "d61300b9895f129f4bd684b2aff97cf319b6c493" +deps = ["Static", "StaticArrayInterface"] +git-tree-sha1 = "70232f82ffaab9dc52585e0dd043b5e0c6b714f1" uuid = "fb6a15b2-703c-40df-9091-08a04967cfa9" -version = "0.1.11" +version = "0.1.12" [[deps.CodeTracking]] deps = ["InteractiveUtils", "UUIDs"] -git-tree-sha1 = "d57c99cc7e637165c81b30eb268eabe156a45c49" +git-tree-sha1 = "d730914ef30a06732bdd9f763f6cc32e92ffbff1" uuid = "da1fd8a2-8d9e-5ec2-8556-3022fb5608a2" -version = "1.2.2" +version = "1.3.1" [[deps.CodecBzip2]] deps = ["Bzip2_jll", "Libdl", "TranscodingStreams"] @@ -296,10 +284,10 @@ uuid = "944b1d66-785c-5afd-91f1-9de20f533193" version = "0.7.1" [[deps.ColorSchemes]] -deps = ["ColorTypes", "ColorVectorSpace", "Colors", "FixedPointNumbers", "Random", "SnoopPrecompile"] -git-tree-sha1 = "aa3edc8f8dea6cbfa176ee12f7c2fc82f0608ed3" +deps = ["ColorTypes", "ColorVectorSpace", "Colors", "FixedPointNumbers", "PrecompileTools", "Random"] +git-tree-sha1 = "be6ab11021cd29f0344d5c4357b163af05a48cba" uuid = "35d6a980-a343-548e-a6ea-1d62b119f2f4" -version = "3.20.0" +version = "3.21.0" [[deps.ColorTypes]] deps = ["FixedPointNumbers", "Random"] @@ -325,10 +313,10 @@ uuid = "861a8166-3701-5b0c-9a16-15d98fcdc6aa" version = "1.0.2" [[deps.CommonMark]] -deps = ["Crayons", "JSON", "SnoopPrecompile", "URIs"] -git-tree-sha1 = "e2f4627b0d3f2c1876360e0b242a7c23923b469d" +deps = ["Crayons", "JSON", "PrecompileTools", "URIs"] +git-tree-sha1 = "532c4185d3c9037c0237546d817858b23cf9e071" uuid = "a80b9123-70ca-4bc0-993e-6e3bcb318db6" -version = "0.8.10" +version = "0.8.12" [[deps.CommonSolve]] git-tree-sha1 = "9441451ee712d1aec22edad62db1a9af3dc8d852" @@ -370,9 +358,15 @@ uuid = "b152e2b5-7a66-4b01-a709-34e65c35f657" version = "0.1.3" [[deps.CompositionsBase]] -git-tree-sha1 = "455419f7e328a1a2493cabc6428d79e951349769" +git-tree-sha1 = "802bb88cd69dfd1509f6670416bd4434015693ad" uuid = "a33af91c-f02d-484b-be07-31d278c5ca2b" -version = "0.1.1" +version = "0.1.2" + +[[deps.ConcurrentUtilities]] +deps = ["Serialization", "Sockets"] +git-tree-sha1 = "96d823b94ba8d187a6d8f0826e731195a74b90e9" +uuid = "f0e56b4a-5159-44fe-b623-3e5288b988bb" +version = "2.2.0" [[deps.ConsoleProgressMonitor]] deps = ["Logging", "ProgressMeter"] @@ -382,9 +376,9 @@ version = "0.1.2" [[deps.ConstructionBase]] deps = ["LinearAlgebra"] -git-tree-sha1 = "89a9db8d28102b094992472d333674bd1a83ce2a" +git-tree-sha1 = "738fec4d684a9a6ee9598a8bfee305b26831f28c" uuid = "187b0558-2788-49d3-abe0-74a17ed4e7c9" -version = "1.5.1" +version = "1.5.2" [[deps.Contour]] git-tree-sha1 = "d05d9e7b7aedff4e5b51a029dced05cfb6125781" @@ -403,9 +397,9 @@ uuid = "a8cc5b0e-0ffa-5ad4-8c14-923d3ee1735f" version = "4.1.1" [[deps.DataAPI]] -git-tree-sha1 = "e8119c1a33d267e16108be441a287a6981ba1630" +git-tree-sha1 = "8da84edb865b0b5b0100c0666a9bc9a0b71c553c" uuid = "9a962f9c-6df0-11e9-0e5d-c546b8b5ee8a" -version = "1.14.0" +version = "1.15.0" [[deps.DataStructures]] deps = ["Compat", "InteractiveUtils", "OrderedCollections"] @@ -428,10 +422,10 @@ uuid = "244e2a9f-e319-4986-a169-4d1fe445cd52" version = "0.1.2" [[deps.DelayDiffEq]] -deps = ["ArrayInterface", "DataStructures", "DiffEqBase", "LinearAlgebra", "Logging", "OrdinaryDiffEq", "Printf", "RecursiveArrayTools", "Reexport", "SciMLBase", "SimpleNonlinearSolve", "UnPack"] -git-tree-sha1 = "78a192625aa84032bde6379f4cb8cef0f3e1ba1b" +deps = ["ArrayInterface", "DataStructures", "DiffEqBase", "LinearAlgebra", "Logging", "OrdinaryDiffEq", "Printf", "RecursiveArrayTools", "Reexport", "SciMLBase", "SimpleNonlinearSolve", "SimpleUnPack"] +git-tree-sha1 = "89f3fbfe78f9d116d1ed0721d65b0b2cf9b36169" uuid = "bcd4f6db-9728-5f36-b5f7-82caef46ccdb" -version = "5.40.0" +version = "5.42.0" [[deps.DelimitedFiles]] deps = ["Mmap"] @@ -444,16 +438,16 @@ uuid = "b429d917-457f-4dbc-8f4c-0cc954292b1d" version = "0.4.0" [[deps.DiffEqBase]] -deps = ["ArrayInterfaceCore", "ChainRulesCore", "DataStructures", "Distributions", "DocStringExtensions", "FastBroadcast", "ForwardDiff", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "MuladdMacro", "Parameters", "Printf", "RecursiveArrayTools", "Reexport", "Requires", "SciMLBase", "Setfield", "SimpleNonlinearSolve", "SparseArrays", "Static", "StaticArrays", "Statistics", "Tricks", "ZygoteRules"] -git-tree-sha1 = "65805bb205e8d011fc91da87d41d14394db5d791" +deps = ["ArrayInterface", "ChainRulesCore", "DataStructures", "Distributions", "DocStringExtensions", "EnumX", "FastBroadcast", "ForwardDiff", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "Markdown", "MuladdMacro", "Parameters", "PreallocationTools", "Printf", "RecursiveArrayTools", "Reexport", "Requires", "SciMLBase", "Setfield", "SparseArrays", "Static", "StaticArraysCore", "Statistics", "Tricks", "TruncatedStacktraces", "ZygoteRules"] +git-tree-sha1 = "ed1108bd9a68977d5e0cbd8b2882293337c15f1c" uuid = "2b5f629d-d688-5b77-993f-72d75c75574e" -version = "6.108.0" +version = "6.124.0" [[deps.DiffEqCallbacks]] deps = ["DataStructures", "DiffEqBase", "ForwardDiff", "LinearAlgebra", "Markdown", "NLsolve", "Parameters", "RecipesBase", "RecursiveArrayTools", "SciMLBase", "StaticArraysCore"] -git-tree-sha1 = "b497f63a13fe37e03ed7ac72d71b72aad17b46c4" +git-tree-sha1 = "63b6be7b396ad395825f3cc48c56b53bfaf7e69d" uuid = "459566f4-90b8-5000-8ac3-15dfb0a30def" -version = "2.26.0" +version = "2.26.1" [[deps.DiffEqNoiseProcess]] deps = ["DiffEqBase", "Distributions", "GPUArraysCore", "LinearAlgebra", "Markdown", "Optim", "PoissonRandom", "QuadGK", "Random", "Random123", "RandomNumbers", "RecipesBase", "RecursiveArrayTools", "Requires", "ResettableStacks", "SciMLBase", "StaticArrays", "Statistics"] @@ -474,10 +468,10 @@ uuid = "b552c78f-8df3-52c6-915a-8e097449b14b" version = "1.13.0" [[deps.DifferentialEquations]] -deps = ["BoundaryValueDiffEq", "DelayDiffEq", "DiffEqBase", "DiffEqCallbacks", "DiffEqNoiseProcess", "JumpProcesses", "LinearAlgebra", "LinearSolve", "OrdinaryDiffEq", "Random", "RecursiveArrayTools", "Reexport", "SciMLBase", "SteadyStateDiffEq", "StochasticDiffEq", "Sundials"] -git-tree-sha1 = "418dad2cfd7377a474326bc86a23cb645fac6527" +deps = ["BoundaryValueDiffEq", "DelayDiffEq", "DiffEqBase", "DiffEqCallbacks", "DiffEqNoiseProcess", "JumpProcesses", "LinearAlgebra", "LinearSolve", "NonlinearSolve", "OrdinaryDiffEq", "Random", "RecursiveArrayTools", "Reexport", "SciMLBase", "SteadyStateDiffEq", "StochasticDiffEq", "Sundials"] +git-tree-sha1 = "ac145e3d718157c679fc4febf2fcef73ec77b067" uuid = "0c46a032-eb83-5123-abaf-570d42b7fbaa" -version = "7.6.0" +version = "7.7.0" [[deps.Distances]] deps = ["LinearAlgebra", "SparseArrays", "Statistics", "StatsAPI"] @@ -490,16 +484,16 @@ deps = ["Random", "Serialization", "Sockets"] uuid = "8ba89e20-285c-5b6f-9357-94700520ee1b" [[deps.Distributions]] -deps = ["ChainRulesCore", "DensityInterface", "FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SparseArrays", "SpecialFunctions", "Statistics", "StatsBase", "StatsFuns", "Test"] -git-tree-sha1 = "da9e1a9058f8d3eec3a8c9fe4faacfb89180066b" +deps = ["ChainRulesCore", "DensityInterface", "FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SparseArrays", "SpecialFunctions", "Statistics", "StatsAPI", "StatsBase", "StatsFuns", "Test"] +git-tree-sha1 = "b0a916504cf33a6f07a4b56c58451d1dc93a2ff5" uuid = "31c24e10-a181-5473-b8eb-7969acd0382f" -version = "0.25.86" +version = "0.25.91" [[deps.DistributionsAD]] deps = ["Adapt", "ChainRules", "ChainRulesCore", "Compat", "DiffRules", "Distributions", "FillArrays", "LinearAlgebra", "NaNMath", "PDMats", "Random", "Requires", "SpecialFunctions", "StaticArrays", "StatsBase", "StatsFuns", "ZygoteRules"] -git-tree-sha1 = "0c139e48a8cea06c6ecbbec19d3ebc5dcbd7870d" +git-tree-sha1 = "c0eb6f717434b3f13cd7a24b412938d952849d77" uuid = "ced4e74d-a319-5a8a-b0ac-84af2272839c" -version = "0.6.43" +version = "0.6.45" [[deps.DocStringExtensions]] deps = ["LibGit2"] @@ -509,9 +503,14 @@ version = "0.9.3" [[deps.DomainSets]] deps = ["CompositeTypes", "IntervalSets", "LinearAlgebra", "Random", "StaticArrays", "Statistics"] -git-tree-sha1 = "988e2db482abeb69efc76ae8b6eba2e93805ee70" +git-tree-sha1 = "698124109da77b6914f64edd696be8dccf90229e" uuid = "5b8099bc-c8ec-5219-889f-1d9e522a28bf" -version = "0.5.15" +version = "0.6.6" + +[[deps.DotEnv]] +git-tree-sha1 = "d48ae0052378d697f8caf0855c4df2c54a97e580" +uuid = "4dc1fcf4-5e3b-5448-94ab-0c38ec0385c1" +version = "0.3.1" [[deps.Downloads]] deps = ["ArgTools", "FileWatching", "LibCURL", "NetworkOptions"] @@ -543,16 +542,34 @@ uuid = "ef4b24a4-a090-4686-a932-e7e56a5a83bd" version = "0.1.9" [[deps.EllipticalSliceSampling]] -deps = ["AbstractMCMC", "ArrayInterfaceCore", "Distributions", "Random", "Statistics"] -git-tree-sha1 = "4cda4527e990c0cc201286e0a0bfbbce00abcfc2" +deps = ["AbstractMCMC", "ArrayInterface", "Distributions", "Random", "Statistics"] +git-tree-sha1 = "973b4927d112559dc737f55d6bf06503a5b3fc14" uuid = "cad2338a-1db2-11e9-3401-43bc07c9ede2" -version = "1.0.0" +version = "1.1.0" [[deps.EnumX]] git-tree-sha1 = "bdb1942cd4c45e3c678fd11569d5cccd80976237" uuid = "4e289a0a-7415-4d19-859d-a7e5c4648b56" version = "1.0.4" +[[deps.Enzyme]] +deps = ["CEnum", "EnzymeCore", "Enzyme_jll", "GPUCompiler", "LLVM", "Libdl", "LinearAlgebra", "ObjectFile", "Printf", "Random"] +git-tree-sha1 = "28c09cee567a3b62a8ae2a99035bd477fdbaee3f" +uuid = "7da242da-08ed-463a-9acd-ee780be4f1d9" +version = "0.11.0" + +[[deps.EnzymeCore]] +deps = ["Adapt"] +git-tree-sha1 = "d0840cfff51e34729d20fd7d0a13938dc983878b" +uuid = "f151be2c-9106-41f4-ab19-57ee4f262869" +version = "0.3.0" + +[[deps.Enzyme_jll]] +deps = ["Artifacts", "JLLWrappers", "LazyArtifacts", "Libdl", "TOML"] +git-tree-sha1 = "b83b072e7a5eee2050800658f5676b0ff7b37dc6" +uuid = "7cc45869-7501-5eee-bdea-0790c847d4ef" +version = "0.0.53+0" + [[deps.Expat_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] git-tree-sha1 = "bad72f730e9e91c08d9427d5e8db95478a3c323d" @@ -560,10 +577,10 @@ uuid = "2e619515-83b5-522b-bb60-26c02a35a201" version = "2.4.8+0" [[deps.ExponentialUtilities]] -deps = ["Adapt", "ArrayInterfaceCore", "ArrayInterfaceGPUArrays", "GPUArraysCore", "GenericSchur", "LinearAlgebra", "Printf", "SnoopPrecompile", "SparseArrays", "libblastrampoline_jll"] -git-tree-sha1 = "eb58c1e1417a6580b983069f1491ff82c37def2c" +deps = ["Adapt", "ArrayInterface", "GPUArraysCore", "GenericSchur", "LinearAlgebra", "Printf", "SnoopPrecompile", "SparseArrays", "libblastrampoline_jll"] +git-tree-sha1 = "fb7dbef7d2631e2d02c49e2750f7447648b0ec9b" uuid = "d4d017d3-3776-5f7e-afef-a10c40355c18" -version = "1.23.0" +version = "1.24.0" [[deps.ExprTools]] git-tree-sha1 = "c1d06d129da9f55715c6c212866f5b1bddc5fa00" @@ -601,10 +618,10 @@ uuid = "f5851436-0d7a-5f13-b9de-f02708fd171a" version = "3.3.10+0" [[deps.FastBroadcast]] -deps = ["ArrayInterface", "ArrayInterfaceCore", "LinearAlgebra", "Polyester", "Static", "StrideArraysCore"] -git-tree-sha1 = "4bef892787c972913d4d84e7255400759bb650e5" +deps = ["ArrayInterface", "LinearAlgebra", "Polyester", "Static", "StaticArrayInterface", "StrideArraysCore"] +git-tree-sha1 = "d1248fceea0b26493fd33e8e9e8c553270da03bd" uuid = "7034ab61-46d4-4ed7-9d0f-46aef9175898" -version = "0.2.4" +version = "0.2.5" [[deps.FastClosures]] git-tree-sha1 = "acebe244d53ee1b461970f8910c235b259e772ef" @@ -628,15 +645,15 @@ uuid = "7b1f6079-737a-58dc-b8bc-7a2ca5c1b5ee" [[deps.FillArrays]] deps = ["LinearAlgebra", "Random", "SparseArrays", "Statistics"] -git-tree-sha1 = "0ba171480d51567ba337e5eea4e68a8231b7a2c3" +git-tree-sha1 = "7072f1e3e5a8be51d525d64f63d3ec1287ff2790" uuid = "1a297f60-69ca-5386-bcde-b61e274b549b" -version = "0.13.10" +version = "0.13.11" [[deps.FiniteDiff]] -deps = ["ArrayInterfaceCore", "LinearAlgebra", "Requires", "Setfield", "SparseArrays", "StaticArrays"] -git-tree-sha1 = "04ed1f0029b6b3af88343e439b995141cb0d0b8d" +deps = ["ArrayInterface", "LinearAlgebra", "Requires", "Setfield", "SparseArrays", "StaticArrays"] +git-tree-sha1 = "6604e18a0220650dbbea7854938768f15955dd8e" uuid = "6a86dc24-6348-571c-b903-95158fe2bd41" -version = "2.17.0" +version = "2.20.0" [[deps.FixedPointNumbers]] deps = ["Statistics"] @@ -708,9 +725,9 @@ version = "6.2.1+2" [[deps.GPUArrays]] deps = ["Adapt", "GPUArraysCore", "LLVM", "LinearAlgebra", "Printf", "Random", "Reexport", "Serialization", "Statistics"] -git-tree-sha1 = "7a2e790b1e2e6f648cfb25c4500c5de1f7b375ef" +git-tree-sha1 = "9ade6983c3dbbd492cf5729f865fe030d1541463" uuid = "0c68f7d7-f131-5f86-a1c3-88cf8149b2d7" -version = "8.6.5" +version = "8.6.6" [[deps.GPUArraysCore]] deps = ["Adapt"] @@ -718,17 +735,23 @@ git-tree-sha1 = "1cd7f0af1aa58abc02ea1d872953a97359cb87fa" uuid = "46192b85-c4d5-4398-a991-12ede77f4527" version = "0.1.4" +[[deps.GPUCompiler]] +deps = ["ExprTools", "InteractiveUtils", "LLVM", "Libdl", "Logging", "Scratch", "TimerOutputs", "UUIDs"] +git-tree-sha1 = "5737dc242dadd392d934ee330c69ceff47f0259c" +uuid = "61eb1bfa-7361-4325-ad38-22787b887f55" +version = "0.19.4" + [[deps.GR]] deps = ["Artifacts", "Base64", "DelimitedFiles", "Downloads", "GR_jll", "HTTP", "JSON", "Libdl", "LinearAlgebra", "Pkg", "Preferences", "Printf", "Random", "Serialization", "Sockets", "TOML", "Tar", "Test", "UUIDs", "p7zip_jll"] -git-tree-sha1 = "4423d87dc2d3201f3f1768a29e807ddc8cc867ef" +git-tree-sha1 = "efaac003187ccc71ace6c755b197284cd4811bfe" uuid = "28b8d3ca-fb5f-59d9-8090-bfdbd6d07a71" -version = "0.71.8" +version = "0.72.4" [[deps.GR_jll]] deps = ["Artifacts", "Bzip2_jll", "Cairo_jll", "FFMPEG_jll", "Fontconfig_jll", "GLFW_jll", "JLLWrappers", "JpegTurbo_jll", "Libdl", "Libtiff_jll", "Pixman_jll", "Qt5Base_jll", "Zlib_jll", "libpng_jll"] -git-tree-sha1 = "3657eb348d44575cc5560c80d7e55b812ff6ffe1" +git-tree-sha1 = "4486ff47de4c18cb511a0da420efebb314556316" uuid = "d2c73de3-f751-5644-a686-071e5b155ba9" -version = "0.71.8+0" +version = "0.72.4+0" [[deps.GeneralizedGenerated]] deps = ["DataStructures", "JuliaVariables", "MLStyle", "Serialization"] @@ -743,10 +766,10 @@ uuid = "c145ed77-6b09-5dd9-b285-bf645a82121e" version = "0.5.3" [[deps.Genie]] -deps = ["ArgParse", "Dates", "Distributed", "EzXML", "FilePathsBase", "HTTP", "HttpCommon", "Inflector", "JSON3", "JuliaFormatter", "Logging", "LoggingExtras", "Markdown", "Millboard", "Nettle", "OrderedCollections", "Pkg", "REPL", "Random", "Reexport", "Revise", "SHA", "Serialization", "Sockets", "UUIDs", "Unicode", "YAML"] -git-tree-sha1 = "65193d5e54b8a7fd2aa0b4831bdd0a9d13a5b397" +deps = ["ArgParse", "Dates", "Distributed", "DotEnv", "EzXML", "FilePathsBase", "HTTP", "HttpCommon", "Inflector", "JSON3", "JuliaFormatter", "Logging", "LoggingExtras", "Markdown", "Millboard", "Nettle", "OrderedCollections", "Pkg", "REPL", "Random", "Reexport", "Revise", "SHA", "Serialization", "Sockets", "UUIDs", "Unicode", "YAML"] +git-tree-sha1 = "365f3f8f2a0c69952ed4f4c3216fb7c5b96773ca" uuid = "c43c736e-a2d1-11e8-161f-af95117fbd1e" -version = "5.6.2" +version = "5.18.0" [[deps.Gettext_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "Libiconv_jll", "Pkg", "XML2_jll"] @@ -761,9 +784,9 @@ uuid = "7746bdde-850d-59dc-9ae8-88ece973131d" version = "2.74.0+2" [[deps.Glob]] -git-tree-sha1 = "4df9f7e06108728ebf00a0a11edee4b29a482bb2" +git-tree-sha1 = "97285bbd5230dd766e9ef6749b80fc617126d496" uuid = "c27321d9-0574-5035-807b-f59d2c89b15c" -version = "1.3.0" +version = "1.3.1" [[deps.GlobalSensitivity]] deps = ["Distributions", "FFTW", "ForwardDiff", "KernelDensity", "LinearAlgebra", "Parameters", "QuasiMonteCarlo", "Random", "RecursiveArrayTools", "Statistics", "StatsBase", "Trapz"] @@ -789,10 +812,10 @@ uuid = "42e2da0e-8278-4e71-bc24-59509adca0fe" version = "1.0.2" [[deps.Groebner]] -deps = ["AbstractAlgebra", "Combinatorics", "Logging", "MultivariatePolynomials", "Primes", "Random"] -git-tree-sha1 = "47f0f03eddecd7ad59c42b1dd46d5f42916aff63" +deps = ["AbstractAlgebra", "Combinatorics", "Logging", "MultivariatePolynomials", "Primes", "Random", "SnoopPrecompile"] +git-tree-sha1 = "b6c3e9e1eb8dcc6fd9bc68fe08dcc7ab22710de6" uuid = "0b43b601-686d-58a3-8a1c-6623616c7cd4" -version = "0.2.11" +version = "0.3.4" [[deps.GroupsCore]] deps = ["Markdown", "Random"] @@ -807,10 +830,10 @@ uuid = "19dc6840-f33b-545b-b366-655c7e3ffd49" version = "1.5.1" [[deps.HTTP]] -deps = ["Base64", "CodecZlib", "Dates", "IniFile", "Logging", "LoggingExtras", "MbedTLS", "NetworkOptions", "OpenSSL", "Random", "SimpleBufferStream", "Sockets", "URIs", "UUIDs"] -git-tree-sha1 = "37e4657cd56b11abe3d10cd4a1ec5fbdb4180263" +deps = ["Base64", "CodecZlib", "ConcurrentUtilities", "Dates", "Logging", "LoggingExtras", "MbedTLS", "NetworkOptions", "OpenSSL", "Random", "SimpleBufferStream", "Sockets", "URIs", "UUIDs"] +git-tree-sha1 = "41f7dfb2b20e7e8bf64f6b6fae98f4d2df027b06" uuid = "cd3eb016-35fb-5094-929b-558a96fad6f3" -version = "1.7.4" +version = "1.9.4" [[deps.HarfBuzz_jll]] deps = ["Artifacts", "Cairo_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "Graphite2_jll", "JLLWrappers", "Libdl", "Libffi_jll", "Pkg"] @@ -831,16 +854,16 @@ uuid = "77172c1b-203f-54ac-aa54-3f1198fe9f90" version = "0.5.0" [[deps.HypergeometricFunctions]] -deps = ["DualNumbers", "LinearAlgebra", "OpenLibm_jll", "SpecialFunctions", "Test"] -git-tree-sha1 = "709d864e3ed6e3545230601f94e11ebc65994641" +deps = ["DualNumbers", "LinearAlgebra", "OpenLibm_jll", "SpecialFunctions"] +git-tree-sha1 = "84204eae2dd237500835990bcade263e27674a93" uuid = "34004b35-14d8-5ef3-9330-4cdb6864b03a" -version = "0.3.11" +version = "0.3.16" [[deps.IRTools]] deps = ["InteractiveUtils", "MacroTools", "Test"] -git-tree-sha1 = "0ade27f0c49cebd8db2523c4eeccf779407cf12c" +git-tree-sha1 = "eac00994ce3229a464c2847e956d77a2c64ad3a5" uuid = "7869d1d1-7146-5819-86e3-90919afe41df" -version = "0.4.9" +version = "0.4.10" [[deps.IfElse]] git-tree-sha1 = "debdd00ffef04665ccbb3e150747a77560e8fad1" @@ -854,14 +877,9 @@ version = "0.1.3" [[deps.Inflector]] deps = ["Unicode"] -git-tree-sha1 = "8555b54ddf27806b070ce1d1cf623e1feb13750c" +git-tree-sha1 = "c82a172a07c94887709e613cc67cec0b472fb742" uuid = "6d011eab-0732-4556-8808-e463c76bf3b6" -version = "1.0.1" - -[[deps.IniFile]] -git-tree-sha1 = "f550e6e32074c939295eb5ea6de31849ac2c9625" -uuid = "83e8ac13-25f8-5344-8a64-a9f2b223428f" -version = "0.5.1" +version = "1.1.0" [[deps.InitialValues]] git-tree-sha1 = "4da0f88e9a39111c2fa3add390ab15f3a44f3ca3" @@ -881,15 +899,15 @@ version = "0.1.0" [[deps.Integrals]] deps = ["CommonSolve", "HCubature", "LinearAlgebra", "MonteCarloIntegration", "QuadGK", "Reexport", "Requires", "SciMLBase"] -git-tree-sha1 = "280fee62bc8426e28a2113fa7c673101e9bf7325" +git-tree-sha1 = "f8f24a73621e9063f696ffeaa83f7a725ab5ae23" uuid = "de52edbc-65ea-441a-8357-d3a637375a31" -version = "3.7.0" +version = "3.8.0" [[deps.IntelOpenMP_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "d979e54b71da82f3a65b62553da4fc3d18c9004c" +git-tree-sha1 = "0cb9352ef2e01574eeebdb102948a58740dcaf83" uuid = "1d5cc7b8-4909-519e-a0f8-d0f5ad9712d0" -version = "2018.0.3+2" +version = "2023.1.0+0" [[deps.InteractiveUtils]] deps = ["Markdown"] @@ -903,21 +921,27 @@ version = "0.14.7" [[deps.IntervalSets]] deps = ["Dates", "Random", "Statistics"] -git-tree-sha1 = "3f91cd3f56ea48d4d2a75c2a65455c5fc74fa347" +git-tree-sha1 = "16c0cc91853084cb5f58a78bd209513900206ce6" uuid = "8197267c-284f-5f27-9208-e0e47529a953" -version = "0.7.3" +version = "0.7.4" [[deps.InverseFunctions]] deps = ["Test"] -git-tree-sha1 = "49510dfcb407e572524ba94aeae2fced1f3feb0f" +git-tree-sha1 = "6667aadd1cdee2c6cd068128b3d226ebc4fb0c67" uuid = "3587e190-3f89-42d0-90ee-14403ec27112" -version = "0.1.8" +version = "0.1.9" [[deps.InvertedIndices]] git-tree-sha1 = "0dc7b50b8d436461be01300fd8cd45aa0274b038" uuid = "41ab1584-1d38-5bbf-9106-f11c6c58b48f" version = "1.3.0" +[[deps.Ipopt_jll]] +deps = ["ASL_jll", "Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "MUMPS_seq_jll", "OpenBLAS32_jll", "Pkg"] +git-tree-sha1 = "e3e202237d93f18856b6ff1016166b0f172a49a8" +uuid = "9cc047cb-c261-5740-88fc-0cf96f7bdcc7" +version = "300.1400.400+0" + [[deps.IrrationalConstants]] git-tree-sha1 = "630b497eafcc20001bba38a4651b327dcfc491d2" uuid = "92d709cd-6900-40b7-9082-c6be49f344b6" @@ -953,9 +977,9 @@ version = "1.4.1" [[deps.JSON]] deps = ["Dates", "Mmap", "Parsers", "Unicode"] -git-tree-sha1 = "3c837543ddb02250ef42f4738347454f95079d4e" +git-tree-sha1 = "31e996f0a15c7b280ba9f76636b3ff9e2ae58c9a" uuid = "682c06a0-de6a-54ab-a142-c8b1cf79cde6" -version = "0.21.3" +version = "0.21.4" [[deps.JSON3]] deps = ["Dates", "Mmap", "Parsers", "SnoopPrecompile", "StructTypes", "UUIDs"] @@ -970,16 +994,16 @@ uuid = "aacddb02-875f-59d6-b918-886e6ef4fbf8" version = "2.1.91+0" [[deps.JuliaFormatter]] -deps = ["CSTParser", "CommonMark", "DataStructures", "Glob", "Pkg", "SnoopPrecompile", "Tokenize"] -git-tree-sha1 = "0f6545dd63fec03d0cfe0c1d28f851e2d804e942" +deps = ["CSTParser", "CommonMark", "DataStructures", "Glob", "Pkg", "PrecompileTools", "Tokenize"] +git-tree-sha1 = "01ab91fcce19c965b3c68a82eb26260a3a7af271" uuid = "98e50ef6-434e-11e9-1051-2b60c6c9e899" -version = "1.0.25" +version = "1.0.29" [[deps.JuliaInterpreter]] deps = ["CodeTracking", "InteractiveUtils", "Random", "UUIDs"] -git-tree-sha1 = "d9ae7a9081d9b1a3b2a5c1d3dac5e2fdaafbd538" +git-tree-sha1 = "6a125e6a4cb391e0b9adbd1afa9e771c2179f8ef" uuid = "aa1ae85d-cabe-5617-a682-6adf51b2e16a" -version = "0.9.22" +version = "0.9.23" [[deps.JuliaVariables]] deps = ["MLStyle", "NameResolution"] @@ -989,9 +1013,9 @@ version = "0.2.4" [[deps.JumpProcesses]] deps = ["ArrayInterface", "DataStructures", "DiffEqBase", "DocStringExtensions", "FunctionWrappers", "Graphs", "LinearAlgebra", "Markdown", "PoissonRandom", "Random", "RandomNumbers", "RecursiveArrayTools", "Reexport", "SciMLBase", "StaticArrays", "TreeViews", "UnPack"] -git-tree-sha1 = "7af8d30e281ce558807917b69ba16575d05f412b" +git-tree-sha1 = "50bd271af7f6cc23be7d24c8c4804809bb5d05ae" uuid = "ccbc3e58-028d-4f4c-8cd5-9ae44345cda5" -version = "9.5.1" +version = "9.6.3" [[deps.KLU]] deps = ["LinearAlgebra", "SparseArrays", "SuiteSparse_jll"] @@ -999,17 +1023,23 @@ git-tree-sha1 = "764164ed65c30738750965d55652db9c94c59bfe" uuid = "ef3ab10e-7fda-4108-b977-705223b18434" version = "0.4.0" +[[deps.KernelAbstractions]] +deps = ["Adapt", "Atomix", "InteractiveUtils", "LinearAlgebra", "MacroTools", "PrecompileTools", "SparseArrays", "StaticArrays", "UUIDs", "UnsafeAtomics", "UnsafeAtomicsLLVM"] +git-tree-sha1 = "47be64f040a7ece575c2b5f53ca6da7b548d69f4" +uuid = "63c18a36-062a-441e-b654-da1e3ab1ce7c" +version = "0.9.4" + [[deps.KernelDensity]] deps = ["Distributions", "DocStringExtensions", "FFTW", "Interpolations", "StatsBase"] -git-tree-sha1 = "9816b296736292a80b9a3200eb7fbb57aaa3917a" +git-tree-sha1 = "90442c50e202a5cdf21a7899c66b240fdef14035" uuid = "5ab0869b-81aa-558d-bb23-cbf5423bbe9b" -version = "0.6.5" +version = "0.6.7" [[deps.Krylov]] deps = ["LinearAlgebra", "Printf", "SparseArrays"] -git-tree-sha1 = "dd90aacbfb622f898a97c2a4411ac49101ebab8a" +git-tree-sha1 = "0356a64062656b0cbb43c504ad5de338251f4bda" uuid = "ba0b0d4f-ebba-5204-a429-3ac8c609bfb7" -version = "0.9.0" +version = "0.9.1" [[deps.KrylovKit]] deps = ["ChainRulesCore", "GPUArraysCore", "LinearAlgebra", "Printf"] @@ -1031,20 +1061,20 @@ version = "3.0.0+1" [[deps.LLVM]] deps = ["CEnum", "LLVMExtra_jll", "Libdl", "Printf", "Unicode"] -git-tree-sha1 = "f044a2796a9e18e0531b9b3072b0019a61f264bc" +git-tree-sha1 = "26a31cdd9f1f4ea74f649a7bf249703c687a953d" uuid = "929cbde3-209d-540e-8aea-75f648917ca0" -version = "4.17.1" +version = "5.1.0" [[deps.LLVMExtra_jll]] deps = ["Artifacts", "JLLWrappers", "LazyArtifacts", "Libdl", "TOML"] -git-tree-sha1 = "070e4b5b65827f82c16ae0916376cb47377aa1b5" +git-tree-sha1 = "09b7505cc0b1cee87e5d4a26eea61d2e1b0dcd35" uuid = "dad2f222-ce93-54a1-a47d-0025e8a3acab" -version = "0.0.18+0" +version = "0.0.21+0" [[deps.LRUCache]] -git-tree-sha1 = "d862633ef6097461037a00a13f709a62ae4bdfdd" +git-tree-sha1 = "48c10e3cc27e30de82463c27bef0b8bdbd1dc634" uuid = "8ac3fa9e-de4c-5943-b1dc-09c6b5f20637" -version = "1.4.0" +version = "1.4.1" [[deps.LZO_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -1058,10 +1088,10 @@ uuid = "b964fa9f-0449-5b57-a5c2-d3ea65f4040f" version = "1.3.0" [[deps.LabelledArrays]] -deps = ["ArrayInterfaceCore", "ArrayInterfaceStaticArrays", "ArrayInterfaceStaticArraysCore", "ChainRulesCore", "ForwardDiff", "LinearAlgebra", "MacroTools", "PreallocationTools", "RecursiveArrayTools", "StaticArrays"] -git-tree-sha1 = "0a92979c14dfa71adbf892f0cd073e34b7189197" +deps = ["ArrayInterface", "ChainRulesCore", "ForwardDiff", "LinearAlgebra", "MacroTools", "PreallocationTools", "RecursiveArrayTools", "StaticArrays"] +git-tree-sha1 = "cd04158424635efd05ff38d5f55843397b7416a9" uuid = "2ee39098-c373-598a-b85f-a56591580800" -version = "1.13.0" +version = "1.14.0" [[deps.LambertW]] git-tree-sha1 = "c5ffc834de5d61d00d2b0e18c96267cffc21f648" @@ -1070,9 +1100,9 @@ version = "0.4.6" [[deps.Latexify]] deps = ["Formatting", "InteractiveUtils", "LaTeXStrings", "MacroTools", "Markdown", "OrderedCollections", "Printf", "Requires"] -git-tree-sha1 = "2422f47b34d4b127720a18f86fa7b1aa2e141f29" +git-tree-sha1 = "099e356f267354f46ba65087981a77da23a279b7" uuid = "23fbe1c1-3f47-55db-b15f-69d7ec21a316" -version = "0.15.18" +version = "0.16.0" [[deps.LatinHypercubeSampling]] deps = ["Random", "StableRNGs", "StatsBase", "Test"] @@ -1087,10 +1117,10 @@ uuid = "73f95e8e-ec14-4e6a-8b18-0d2e271c4e55" version = "0.0.1" [[deps.LayoutPointers]] -deps = ["ArrayInterface", "ArrayInterfaceOffsetArrays", "ArrayInterfaceStaticArrays", "LinearAlgebra", "ManualMemory", "SIMDTypes", "Static"] -git-tree-sha1 = "0ad6f0c51ce004dadc24a28a0dfecfb568e52242" +deps = ["ArrayInterface", "LinearAlgebra", "ManualMemory", "SIMDTypes", "Static", "StaticArrayInterface"] +git-tree-sha1 = "88b8f66b604da079a627b6fb2860d3704a6729a1" uuid = "10f19ff3-798f-405d-979b-55457f8fc047" -version = "0.1.13" +version = "0.1.14" [[deps.Lazy]] deps = ["MacroTools"] @@ -1174,9 +1204,9 @@ version = "2.35.0+0" [[deps.Libtask]] deps = ["FunctionWrappers", "LRUCache", "LinearAlgebra", "Statistics"] -git-tree-sha1 = "3e893f18b4326ed392b699a4948b30885125d371" +git-tree-sha1 = "345a40c746404dd9cb1bbc368715856838ab96f2" uuid = "6f1fad26-d15e-5dc8-ae53-837a1d7b8c9f" -version = "0.8.5" +version = "0.8.6" [[deps.Libtiff_jll]] deps = ["Artifacts", "JLLWrappers", "JpegTurbo_jll", "LERC_jll", "Libdl", "Pkg", "Zlib_jll", "Zstd_jll"] @@ -1207,10 +1237,10 @@ deps = ["Libdl", "libblastrampoline_jll"] uuid = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e" [[deps.LinearSolve]] -deps = ["ArrayInterface", "DocStringExtensions", "FastLapackInterface", "GPUArraysCore", "IterativeSolvers", "KLU", "Krylov", "KrylovKit", "LinearAlgebra", "Preferences", "RecursiveFactorization", "Reexport", "SciMLBase", "SciMLOperators", "Setfield", "SnoopPrecompile", "SparseArrays", "Sparspak", "SuiteSparse", "UnPack"] -git-tree-sha1 = "d1fce810e9a4213607f0182cf25ffd6ce13e19b6" +deps = ["ArrayInterface", "DocStringExtensions", "EnumX", "FastLapackInterface", "GPUArraysCore", "IterativeSolvers", "KLU", "Krylov", "KrylovKit", "LinearAlgebra", "Preferences", "RecursiveFactorization", "Reexport", "SciMLBase", "SciMLOperators", "Setfield", "SnoopPrecompile", "SparseArrays", "Sparspak", "SuiteSparse", "UnPack"] +git-tree-sha1 = "4a4f8cc7a59fadbb02d1852d1e0cef5dca3a9460" uuid = "7ed4a6bd-45f5-4d41-b270-4a48e9bafcae" -version = "1.37.0" +version = "1.42.0" [[deps.LogDensityProblems]] deps = ["ArgCheck", "DocStringExtensions", "Random"] @@ -1220,9 +1250,9 @@ version = "2.1.1" [[deps.LogDensityProblemsAD]] deps = ["DocStringExtensions", "LogDensityProblems", "Requires", "SimpleUnPack"] -git-tree-sha1 = "79b13f322a23844bb026a0586ae7a649bba7c826" +git-tree-sha1 = "5f219f583a399381dc147b984648429bf8c3fc6a" uuid = "996a588d-648d-4e1f-a8f0-a84b347e47b1" -version = "1.4.1" +version = "1.4.2" [[deps.LogExpFunctions]] deps = ["ChainRulesCore", "ChangesOfVariables", "DocStringExtensions", "InverseFunctions", "IrrationalConstants", "LinearAlgebra"] @@ -1235,15 +1265,15 @@ uuid = "56ddb016-857b-54e1-b83d-db4d58db5568" [[deps.LoggingExtras]] deps = ["Dates", "Logging"] -git-tree-sha1 = "5d4d2d9904227b8bd66386c1138cf4d5ffa826bf" +git-tree-sha1 = "cedb76b37bc5a6c702ade66be44f831fa23c681e" uuid = "e6f89c97-d47a-5376-807f-9c37f3926c36" -version = "0.4.9" +version = "1.0.0" [[deps.LoopVectorization]] -deps = ["ArrayInterface", "ArrayInterfaceCore", "ArrayInterfaceOffsetArrays", "ArrayInterfaceStaticArrays", "CPUSummary", "ChainRulesCore", "CloseOpenIntervals", "DocStringExtensions", "ForwardDiff", "HostCPUFeatures", "IfElse", "LayoutPointers", "LinearAlgebra", "OffsetArrays", "PolyesterWeave", "SIMDTypes", "SLEEFPirates", "SnoopPrecompile", "SpecialFunctions", "Static", "ThreadingUtilities", "UnPack", "VectorizationBase"] -git-tree-sha1 = "9696a80c21a56b937e3fd89e972f8db5db3186e2" +deps = ["ArrayInterface", "ArrayInterfaceCore", "CPUSummary", "ChainRulesCore", "CloseOpenIntervals", "DocStringExtensions", "ForwardDiff", "HostCPUFeatures", "IfElse", "LayoutPointers", "LinearAlgebra", "OffsetArrays", "PolyesterWeave", "PrecompileTools", "SIMDTypes", "SLEEFPirates", "SpecialFunctions", "Static", "StaticArrayInterface", "ThreadingUtilities", "UnPack", "VectorizationBase"] +git-tree-sha1 = "3bb62b5003bc7d2d49f26663484267dc49fa1bf5" uuid = "bdcacae8-1622-11e9-2a5c-532679323890" -version = "0.12.150" +version = "0.12.159" [[deps.LoweredCodeUtils]] deps = ["JuliaInterpreter"] @@ -1253,15 +1283,21 @@ version = "2.3.0" [[deps.MCMCChains]] deps = ["AbstractMCMC", "AxisArrays", "Dates", "Distributions", "Formatting", "IteratorInterfaceExtensions", "KernelDensity", "LinearAlgebra", "MCMCDiagnosticTools", "MLJModelInterface", "NaturalSort", "OrderedCollections", "PrettyTables", "Random", "RecipesBase", "Statistics", "StatsBase", "StatsFuns", "TableTraits", "Tables"] -git-tree-sha1 = "3d70a6e7f57cd0ba1af5284f5c15d8f6331983a2" +git-tree-sha1 = "5eec3d97404f1df009560e5e17d0d64ea713dc91" uuid = "c7f686f2-ff18-58e9-bc7b-31028e88f75d" -version = "6.0.0" +version = "6.0.1" [[deps.MCMCDiagnosticTools]] deps = ["AbstractFFTs", "DataAPI", "DataStructures", "Distributions", "LinearAlgebra", "MLJModelInterface", "Random", "SpecialFunctions", "Statistics", "StatsBase", "StatsFuns", "Tables"] -git-tree-sha1 = "889c36e76dbde08c54f5a8bb5eb5049aab1ef519" +git-tree-sha1 = "09202be9ac9489905c26f525e7050e014bdb70d5" uuid = "be115224-59cd-429b-ad48-344e309966f0" -version = "0.3.1" +version = "0.3.2" + +[[deps.METIS_jll]] +deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] +git-tree-sha1 = "1fd0a97409e418b78c53fac671cf4622efdf0f21" +uuid = "d00139f3-1899-568f-a2f0-47f597d42d70" +version = "5.1.2+0" [[deps.MKL_jll]] deps = ["Artifacts", "IntelOpenMP_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "Pkg"] @@ -1280,6 +1316,12 @@ git-tree-sha1 = "bc38dff0548128765760c79eb7388a4b37fae2c8" uuid = "d8e11817-5142-5d16-987a-aa16d5891078" version = "0.4.17" +[[deps.MUMPS_seq_jll]] +deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "METIS_jll", "OpenBLAS32_jll", "Pkg"] +git-tree-sha1 = "29de2841fa5aefe615dea179fcde48bb87b58f57" +uuid = "d7ed1dd3-d0ae-5e8e-bfb4-87a502085b8d" +version = "5.4.1+0" + [[deps.MacroTools]] deps = ["Markdown", "Random"] git-tree-sha1 = "42324d08725e200c23d4dfb549e0d5d89dede2d2" @@ -1292,19 +1334,19 @@ uuid = "d125e4d3-2237-4719-b19c-fa641b8a4667" version = "0.1.8" [[deps.MappedArrays]] -git-tree-sha1 = "e8b359ef06ec72e8c030463fe02efe5527ee5142" +git-tree-sha1 = "2dab0221fe2b0f2cb6754eaa743cc266339f527e" uuid = "dbb5928d-eab1-5f90-85c2-b9b0edb7c900" -version = "0.4.1" +version = "0.4.2" [[deps.Markdown]] deps = ["Base64"] uuid = "d6f4376e-aef5-505a-96c1-9c027394607a" [[deps.MathOptInterface]] -deps = ["BenchmarkTools", "CodecBzip2", "CodecZlib", "DataStructures", "ForwardDiff", "JSON", "LinearAlgebra", "MutableArithmetics", "NaNMath", "OrderedCollections", "Printf", "SnoopPrecompile", "SparseArrays", "SpecialFunctions", "Test", "Unicode"] -git-tree-sha1 = "3ba708c18f4a5ee83f3a6fb67a2775147a1f59f5" +deps = ["BenchmarkTools", "CodecBzip2", "CodecZlib", "DataStructures", "ForwardDiff", "JSON", "LinearAlgebra", "MutableArithmetics", "NaNMath", "OrderedCollections", "PrecompileTools", "Printf", "SparseArrays", "SpecialFunctions", "Test", "Unicode"] +git-tree-sha1 = "8e054675d393ce5866dcdd6a071075e25e21a39c" uuid = "b8f27783-ece8-5eb3-8dc8-9495eed66fee" -version = "1.13.2" +version = "1.15.1" [[deps.MathProgBase]] deps = ["LinearAlgebra", "SparseArrays"] @@ -1350,9 +1392,9 @@ uuid = "a63ad114-7e13-5084-954f-fe012c677804" [[deps.ModelingToolkit]] deps = ["AbstractTrees", "ArrayInterface", "Combinatorics", "Compat", "ConstructionBase", "DataStructures", "DiffEqBase", "DiffEqCallbacks", "DiffRules", "Distributed", "Distributions", "DocStringExtensions", "DomainSets", "ForwardDiff", "FunctionWrappersWrappers", "Graphs", "IfElse", "InteractiveUtils", "JuliaFormatter", "JumpProcesses", "LabelledArrays", "Latexify", "Libdl", "LinearAlgebra", "MacroTools", "NaNMath", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLBase", "Serialization", "Setfield", "SimpleNonlinearSolve", "SparseArrays", "SpecialFunctions", "StaticArrays", "SymbolicIndexingInterface", "SymbolicUtils", "Symbolics", "UnPack", "Unitful"] -git-tree-sha1 = "c2355e8475bb127e289245d5dd0dc3224233610b" +git-tree-sha1 = "e52b0337d18fd6ca8b1e1e3d801636dba203b966" uuid = "961ee093-0014-501f-94e3-6117800e7a78" -version = "8.48.1" +version = "8.55.1" [[deps.MonteCarloIntegration]] deps = ["Distributions", "Random"] @@ -1377,9 +1419,9 @@ version = "0.4.7" [[deps.MutableArithmetics]] deps = ["LinearAlgebra", "SparseArrays", "Test"] -git-tree-sha1 = "3295d296288ab1a0a2528feb424b854418acff57" +git-tree-sha1 = "964cb1a7069723727025ae295408747a0b36a854" uuid = "d8a4904e-b15c-11e9-3269-09a3773c0cb0" -version = "1.2.3" +version = "1.3.0" [[deps.NLSolversBase]] deps = ["DiffResults", "Distributed", "FiniteDiff", "ForwardDiff"] @@ -1406,10 +1448,10 @@ uuid = "2774e3e8-f4cf-5e23-947b-6d7e65073b56" version = "4.5.1" [[deps.NNlib]] -deps = ["Adapt", "ChainRulesCore", "LinearAlgebra", "Pkg", "Random", "Requires", "Statistics"] -git-tree-sha1 = "33ad5a19dc6730d592d8ce91c14354d758e53b0e" +deps = ["Adapt", "Atomix", "ChainRulesCore", "GPUArraysCore", "KernelAbstractions", "LinearAlgebra", "Pkg", "Random", "Requires", "Statistics"] +git-tree-sha1 = "99e6dbb50d8a96702dc60954569e9fe7291cc55d" uuid = "872c559c-99b0-510c-b3b7-b6c96a88d5cd" -version = "0.8.19" +version = "0.8.20" [[deps.NaNMath]] deps = ["OpenLibm_jll"] @@ -1425,9 +1467,9 @@ version = "0.1.5" [[deps.NamedArrays]] deps = ["Combinatorics", "DataStructures", "DelimitedFiles", "InvertedIndices", "LinearAlgebra", "Random", "Requires", "SparseArrays", "Statistics"] -git-tree-sha1 = "2b3bcadd0fc35debfd67972e1af45a3a761f2d4b" +git-tree-sha1 = "b84e17976a40cb2bfe3ae7edb3673a8c630d4f95" uuid = "86f7a689-2022-50b4-a561-43c23ac3c673" -version = "0.9.7" +version = "0.9.8" [[deps.NaturalSort]] git-tree-sha1 = "eda490d06b9f7c00752ee81cfa451efe55521e21" @@ -1451,16 +1493,22 @@ uuid = "ca575930-c2e3-43a9-ace4-1e988b2c1908" version = "1.2.0" [[deps.NonlinearSolve]] -deps = ["ArrayInterfaceCore", "FiniteDiff", "ForwardDiff", "IterativeSolvers", "LinearAlgebra", "RecursiveArrayTools", "RecursiveFactorization", "Reexport", "SciMLBase", "Setfield", "StaticArrays", "UnPack"] -git-tree-sha1 = "a754a21521c0ab48d37f44bbac1eefd1387bdcfc" +deps = ["ArrayInterface", "DiffEqBase", "EnumX", "FiniteDiff", "ForwardDiff", "LinearAlgebra", "LinearSolve", "RecursiveArrayTools", "Reexport", "SciMLBase", "SimpleNonlinearSolve", "SnoopPrecompile", "SparseArrays", "SparseDiffTools", "StaticArraysCore", "UnPack"] +git-tree-sha1 = "a6000c813371cd3cd9cbbdf8a356fc3a97138d92" uuid = "8913a72c-1f9b-4ce2-8d82-65094dcecaec" -version = "0.3.22" +version = "1.6.0" [[deps.Nullables]] git-tree-sha1 = "8f87854cc8f3685a60689d8edecaa29d2251979b" uuid = "4d1e1d77-625e-5b40-9113-a560ec7a8ecd" version = "1.0.0" +[[deps.ObjectFile]] +deps = ["Reexport", "StructIO"] +git-tree-sha1 = "55ce61d43409b1fb0279d1781bf3b0f22c83ab3b" +uuid = "d8793406-e978-5875-9003-1fc021f44a92" +version = "0.3.7" + [[deps.OffsetArrays]] deps = ["Adapt"] git-tree-sha1 = "82d7c9e310fe55aa54996e6f7f94674e2a38fcb4" @@ -1473,6 +1521,12 @@ git-tree-sha1 = "887579a3eb005446d514ab7aeac5d1d027658b8f" uuid = "e7412a2a-1a6e-54c0-be00-318e2571c051" version = "1.3.5+1" +[[deps.OpenBLAS32_jll]] +deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "Pkg"] +git-tree-sha1 = "9c6c2ed4b7acd2137b878eb96c68e63b76199d0f" +uuid = "656ef2d0-ae68-5445-9ca0-591084a874a2" +version = "0.3.17+0" + [[deps.OpenBLAS_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "Libdl"] uuid = "4536629a-c528-5b80-bd46-f80d51c5b363" @@ -1485,9 +1539,9 @@ version = "0.8.1+0" [[deps.OpenSSL]] deps = ["BitFlags", "Dates", "MozillaCACerts_jll", "OpenSSL_jll", "Sockets"] -git-tree-sha1 = "6503b77492fd7fcb9379bf73cd31035670e3c509" +git-tree-sha1 = "51901a49222b09e3743c65b8847687ae5fc78eb2" uuid = "4d8831e6-92b7-49fb-bdf8-b643e874388c" -version = "1.3.3" +version = "1.4.1" [[deps.OpenSSL_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -1503,9 +1557,9 @@ version = "0.5.5+0" [[deps.Optim]] deps = ["Compat", "FillArrays", "ForwardDiff", "LineSearches", "LinearAlgebra", "NLSolversBase", "NaNMath", "Parameters", "PositiveFactorizations", "Printf", "SparseArrays", "StatsBase"] -git-tree-sha1 = "1903afc76b7d01719d9c30d3c7d501b61db96721" +git-tree-sha1 = "a89b11f0f354f06099e4001c151dffad7ebab015" uuid = "429524aa-4258-5aef-a3af-852621145aeb" -version = "1.7.4" +version = "1.7.5" [[deps.Optimisers]] deps = ["ChainRulesCore", "Functors", "LinearAlgebra", "Random", "Statistics"] @@ -1514,10 +1568,10 @@ uuid = "3bd65402-5787-11e9-1adc-39752487f4e2" version = "0.2.15" [[deps.Optimization]] -deps = ["ArrayInterface", "ConsoleProgressMonitor", "DocStringExtensions", "Logging", "LoggingExtras", "Pkg", "Printf", "ProgressLogging", "Reexport", "Requires", "SciMLBase", "SparseArrays", "TerminalLoggers"] -git-tree-sha1 = "2445008f1f3061f7685bb2c1dd6b556261efd4b9" +deps = ["ArrayInterface", "ConsoleProgressMonitor", "DocStringExtensions", "Enzyme", "LinearAlgebra", "Logging", "LoggingExtras", "Pkg", "Printf", "ProgressLogging", "Reexport", "Requires", "SciMLBase", "SparseArrays", "TerminalLoggers"] +git-tree-sha1 = "82ffb0d292601b9b64a1a03e043f79536d9d243c" uuid = "7f7a1694-90dd-40f0-9382-eb1efda571ba" -version = "3.12.1" +version = "3.14.1" [[deps.OptimizationBBO]] deps = ["BlackBoxOptim", "Optimization", "Reexport"] @@ -1526,16 +1580,16 @@ uuid = "3e6eede4-6085-4f62-9a71-46d9bc1eb92b" version = "0.1.4" [[deps.OptimizationMOI]] -deps = ["MathOptInterface", "Optimization", "Reexport", "SparseArrays"] -git-tree-sha1 = "78ad67e9264345d8432edc59b27290202e9a5235" +deps = ["Ipopt_jll", "MathOptInterface", "ModelingToolkit", "Optimization", "Reexport", "SparseArrays", "Symbolics"] +git-tree-sha1 = "1eb9464b555b98752dbed420583b43cd8fe5f344" uuid = "fd9f6733-72f4-499f-8506-86b2bdd0dea1" -version = "0.1.9" +version = "0.1.13" [[deps.OptimizationNLopt]] deps = ["NLopt", "Optimization", "Reexport"] -git-tree-sha1 = "ab8939db0f2ca46dc4115936eacf9de609ecb234" +git-tree-sha1 = "10d58c91cde18c6c576f6559d546d7c94971fa47" uuid = "4e6fcdb7-1186-4e1f-a706-475e75c168bb" -version = "0.1.2" +version = "0.1.5" [[deps.Opus_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] @@ -1544,15 +1598,15 @@ uuid = "91d4177d-7536-5919-b921-800302f37372" version = "1.3.2+0" [[deps.OrderedCollections]] -git-tree-sha1 = "85f8e6578bf1f9ee0d11e7bb1b1456435479d47c" +git-tree-sha1 = "d321bf2de576bf25ec4d3e4360faca399afca282" uuid = "bac558e1-5e72-5ebc-8fee-abe8a469f55d" -version = "1.4.1" +version = "1.6.0" [[deps.OrdinaryDiffEq]] -deps = ["Adapt", "ArrayInterface", "ArrayInterfaceCore", "ArrayInterfaceGPUArrays", "ArrayInterfaceStaticArrays", "ArrayInterfaceStaticArraysCore", "DataStructures", "DiffEqBase", "DocStringExtensions", "ExponentialUtilities", "FastBroadcast", "FastClosures", "FiniteDiff", "ForwardDiff", "FunctionWrappersWrappers", "LinearAlgebra", "LinearSolve", "Logging", "LoopVectorization", "MacroTools", "MuladdMacro", "NLsolve", "NonlinearSolve", "Polyester", "PreallocationTools", "Preferences", "RecursiveArrayTools", "Reexport", "SciMLBase", "SnoopPrecompile", "SparseArrays", "SparseDiffTools", "StaticArrays", "UnPack"] -git-tree-sha1 = "88b3bc390fe76e559bef97b6abe55e8d3a440a56" +deps = ["Adapt", "ArrayInterface", "DataStructures", "DiffEqBase", "DocStringExtensions", "ExponentialUtilities", "FastBroadcast", "FastClosures", "FiniteDiff", "ForwardDiff", "FunctionWrappersWrappers", "IfElse", "LineSearches", "LinearAlgebra", "LinearSolve", "Logging", "LoopVectorization", "MacroTools", "MuladdMacro", "NLsolve", "NonlinearSolve", "Polyester", "PreallocationTools", "PrecompileTools", "Preferences", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLNLSolve", "SimpleNonlinearSolve", "SimpleUnPack", "SparseArrays", "SparseDiffTools", "StaticArrayInterface", "StaticArrays", "TruncatedStacktraces"] +git-tree-sha1 = "47fc5cf4174a7d45fa541669abc5405d9ef6b8df" uuid = "1dea7af3-3e70-54e6-95c3-0bf5283fa5ed" -version = "6.29.3" +version = "6.51.1" [[deps.PCRE2_jll]] deps = ["Artifacts", "Libdl"] @@ -1572,10 +1626,10 @@ uuid = "d96e819e-fc66-5662-9728-84c9c7592b0a" version = "0.12.3" [[deps.Parsers]] -deps = ["Dates", "SnoopPrecompile"] -git-tree-sha1 = "478ac6c952fddd4399e71d4779797c538d0ff2bf" +deps = ["Dates", "PrecompileTools", "UUIDs"] +git-tree-sha1 = "7302075e5e06da7d000d9bfa055013e3e85578ca" uuid = "69de0a69-1ddd-5017-9359-2bf0b02dc9f0" -version = "2.5.8" +version = "2.5.9" [[deps.Pipe]] git-tree-sha1 = "6842804e7867b115ca9de748a0cf6b364523c16d" @@ -1600,16 +1654,16 @@ uuid = "ccf2f8ad-2431-5c83-bf29-c5338b663b6a" version = "3.1.0" [[deps.PlotUtils]] -deps = ["ColorSchemes", "Colors", "Dates", "Printf", "Random", "Reexport", "SnoopPrecompile", "Statistics"] -git-tree-sha1 = "c95373e73290cf50a8a22c3375e4625ded5c5280" +deps = ["ColorSchemes", "Colors", "Dates", "PrecompileTools", "Printf", "Random", "Reexport", "Statistics"] +git-tree-sha1 = "f92e1315dadf8c46561fb9396e525f7200cdc227" uuid = "995b91a9-d308-5afd-9ec6-746e21dbc043" -version = "1.3.4" +version = "1.3.5" [[deps.Plots]] -deps = ["Base64", "Contour", "Dates", "Downloads", "FFMPEG", "FixedPointNumbers", "GR", "JLFzf", "JSON", "LaTeXStrings", "Latexify", "LinearAlgebra", "Measures", "NaNMath", "Pkg", "PlotThemes", "PlotUtils", "Preferences", "Printf", "REPL", "Random", "RecipesBase", "RecipesPipeline", "Reexport", "RelocatableFolders", "Requires", "Scratch", "Showoff", "SnoopPrecompile", "SparseArrays", "Statistics", "StatsBase", "UUIDs", "UnicodeFun", "Unzip"] -git-tree-sha1 = "f49a45a239e13333b8b936120fe6d793fe58a972" +deps = ["Base64", "Contour", "Dates", "Downloads", "FFMPEG", "FixedPointNumbers", "GR", "JLFzf", "JSON", "LaTeXStrings", "Latexify", "LinearAlgebra", "Measures", "NaNMath", "Pkg", "PlotThemes", "PlotUtils", "PrecompileTools", "Preferences", "Printf", "REPL", "Random", "RecipesBase", "RecipesPipeline", "Reexport", "RelocatableFolders", "Requires", "Scratch", "Showoff", "SparseArrays", "Statistics", "StatsBase", "UUIDs", "UnicodeFun", "Unzip"] +git-tree-sha1 = "d03ef538114b38f89d66776f2d8fdc0280f90621" uuid = "91a5bcdd-55d7-5caf-9e0b-520d859cae80" -version = "1.38.8" +version = "1.38.12" [[deps.PoissonRandom]] deps = ["Random"] @@ -1618,16 +1672,16 @@ uuid = "e409e4f3-bfea-5376-8464-e040bb5c01ab" version = "0.4.4" [[deps.Polyester]] -deps = ["ArrayInterface", "BitTwiddlingConvenienceFunctions", "CPUSummary", "IfElse", "ManualMemory", "PolyesterWeave", "Requires", "Static", "StrideArraysCore", "ThreadingUtilities"] -git-tree-sha1 = "a5071cd52fc3fc0a960b825ddeb64e352fdf41e1" +deps = ["ArrayInterface", "BitTwiddlingConvenienceFunctions", "CPUSummary", "IfElse", "ManualMemory", "PolyesterWeave", "Requires", "Static", "StaticArrayInterface", "StrideArraysCore", "ThreadingUtilities"] +git-tree-sha1 = "0fe4e7c4d8ff4c70bfa507f0dd96fa161b115777" uuid = "f517fe37-dbe3-4b94-8317-1923a5111588" -version = "0.6.20" +version = "0.7.3" [[deps.PolyesterWeave]] deps = ["BitTwiddlingConvenienceFunctions", "CPUSummary", "IfElse", "Static", "ThreadingUtilities"] -git-tree-sha1 = "43883d15c7cf16f340b9367c645cf88372f55641" +git-tree-sha1 = "240d7170f5ffdb285f9427b92333c3463bf65bf6" uuid = "1d0040c9-8b98-4ee7-8388-3f51789ca0ad" -version = "0.1.13" +version = "0.2.1" [[deps.PositiveFactorizations]] deps = ["LinearAlgebra"] @@ -1636,16 +1690,22 @@ uuid = "85a6dd25-e78a-55b7-8502-1745935b8125" version = "0.2.4" [[deps.PreallocationTools]] -deps = ["Adapt", "ArrayInterfaceCore", "ForwardDiff", "Requires"] -git-tree-sha1 = "2c7658dd593e3adc118b00429e1048829f1abb8c" +deps = ["Adapt", "ArrayInterface", "ForwardDiff", "Requires"] +git-tree-sha1 = "f739b1b3cc7b9949af3b35089931f2b58c289163" uuid = "d236fae5-4411-538c-8e31-a6e3d9e00b46" -version = "0.4.11" +version = "0.4.12" + +[[deps.PrecompileTools]] +deps = ["Preferences"] +git-tree-sha1 = "259e206946c293698122f63e2b513a7c99a244e8" +uuid = "aea7be01-6a6a-4083-8856-8a6e6704d82a" +version = "1.1.1" [[deps.Preferences]] deps = ["TOML"] -git-tree-sha1 = "47e5f437cc0e7ef2ce8406ce1e7e24d44915f88d" +git-tree-sha1 = "7eb1686b4f04b82f96ed7a4ea5890a4f0c7a09f1" uuid = "21216c6a-2e73-6563-6e65-726566657250" -version = "1.3.0" +version = "1.4.0" [[deps.PrettyPrint]] git-tree-sha1 = "632eb4abab3449ab30c5e1afaa874f0b98b586e4" @@ -1654,9 +1714,9 @@ version = "0.2.0" [[deps.PrettyTables]] deps = ["Crayons", "Formatting", "LaTeXStrings", "Markdown", "Reexport", "StringManipulation", "Tables"] -git-tree-sha1 = "548793c7859e28ef026dba514752275ee871169f" +git-tree-sha1 = "213579618ec1f42dea7dd637a42785a608b1ea9c" uuid = "08abe8d2-0d0c-5749-adfa-8a2ac140af0d" -version = "2.2.3" +version = "2.2.4" [[deps.Primes]] deps = ["IntegerMathUtils"] @@ -1712,9 +1772,9 @@ uuid = "9a3f8284-a2c9-5f02-9a11-845980a1fd5c" [[deps.Random123]] deps = ["Random", "RandomNumbers"] -git-tree-sha1 = "7a1a306b72cfa60634f03a911405f4e64d1b718b" +git-tree-sha1 = "552f30e847641591ba3f39fd1bed559b9deb0ef3" uuid = "74087812-796a-5b5d-8853-05524746bad3" -version = "1.6.0" +version = "1.6.1" [[deps.RandomExtensions]] deps = ["Random", "SparseArrays"] @@ -1735,9 +1795,9 @@ version = "0.3.2" [[deps.Ratios]] deps = ["Requires"] -git-tree-sha1 = "dc84268fe0e3335a62e315a3a7cf2afa7178a734" +git-tree-sha1 = "6d7bb727e76147ba18eed998700998e17b8e4911" uuid = "c84ed2f1-dad5-54f0-aa8e-dbefe2724439" -version = "0.4.3" +version = "0.4.4" [[deps.RealDot]] deps = ["LinearAlgebra"] @@ -1746,22 +1806,22 @@ uuid = "c1ae055f-0cd5-4b69-90a6-9a35b1a98df9" version = "0.1.0" [[deps.RecipesBase]] -deps = ["SnoopPrecompile"] -git-tree-sha1 = "261dddd3b862bd2c940cf6ca4d1c8fe593e457c8" +deps = ["PrecompileTools"] +git-tree-sha1 = "5c3d09cc4f31f5fc6af001c250bf1278733100ff" uuid = "3cdcf5f2-1ef4-517c-9805-6587b60abb01" -version = "1.3.3" +version = "1.3.4" [[deps.RecipesPipeline]] -deps = ["Dates", "NaNMath", "PlotUtils", "RecipesBase", "SnoopPrecompile"] -git-tree-sha1 = "e974477be88cb5e3040009f3767611bc6357846f" +deps = ["Dates", "NaNMath", "PlotUtils", "PrecompileTools", "RecipesBase"] +git-tree-sha1 = "45cf9fd0ca5839d06ef333c8201714e888486342" uuid = "01d81517-befc-4cb6-b9ec-a95719d0359c" -version = "0.6.11" +version = "0.6.12" [[deps.RecursiveArrayTools]] -deps = ["Adapt", "ArrayInterfaceCore", "ArrayInterfaceStaticArraysCore", "ChainRulesCore", "DocStringExtensions", "FillArrays", "GPUArraysCore", "IteratorInterfaceExtensions", "LinearAlgebra", "RecipesBase", "Requires", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables", "ZygoteRules"] -git-tree-sha1 = "54e055256bbd41fd10566880bc4baa5316bca6fe" +deps = ["Adapt", "ArrayInterface", "DocStringExtensions", "GPUArraysCore", "IteratorInterfaceExtensions", "LinearAlgebra", "RecipesBase", "Requires", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables"] +git-tree-sha1 = "02ef02926f30d53b94be443bfaea010c47f6b556" uuid = "731186ca-8d62-57ce-b412-fbd966d074cd" -version = "2.37.0" +version = "2.38.5" [[deps.RecursiveFactorization]] deps = ["LinearAlgebra", "LoopVectorization", "Polyester", "SnoopPrecompile", "StrideArraysCore", "TriangularSolve"] @@ -1794,9 +1854,9 @@ version = "1.1.1" [[deps.Revise]] deps = ["CodeTracking", "Distributed", "FileWatching", "JuliaInterpreter", "LibGit2", "LoweredCodeUtils", "OrderedCollections", "Pkg", "REPL", "Requires", "UUIDs", "Unicode"] -git-tree-sha1 = "90cb983381a9dc7d3dff5fb2d1ee52cd59877412" +git-tree-sha1 = "feafdc70b2e6684314e188d95fe66d116de834a7" uuid = "295af30f-e4ad-537b-8983-00126c2a3abe" -version = "3.5.1" +version = "3.5.2" [[deps.Rmath]] deps = ["Random", "Rmath_jll"] @@ -1812,15 +1872,15 @@ version = "0.4.0+0" [[deps.Roots]] deps = ["ChainRulesCore", "CommonSolve", "Printf", "Setfield"] -git-tree-sha1 = "b45deea4566988994ebb8fb80aa438a295995a6e" +git-tree-sha1 = "e19c09f5cc868785766f86435ba40576cf751257" uuid = "f2b01f46-fcfa-551c-844a-d8ac1e96c665" -version = "2.0.10" +version = "2.0.14" [[deps.RuntimeGeneratedFunctions]] deps = ["ExprTools", "SHA", "Serialization"] -git-tree-sha1 = "f139e81a81e6c29c40f1971c9e5309b09c03f2c3" +git-tree-sha1 = "d7d9ebe28062161c1e314ed643097b0c6fe657d9" uuid = "7e49a35a-f44a-4d26-94aa-eba1b4ca6b47" -version = "0.5.6" +version = "0.5.7" [[deps.SHA]] uuid = "ea8e919c-243c-51af-8825-aaa63cd721ce" @@ -1838,10 +1898,10 @@ uuid = "476501e8-09a2-5ece-8869-fb82de89a1fa" version = "0.6.38" [[deps.SciMLBase]] -deps = ["ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "Preferences", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "SnoopPrecompile", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables", "TruncatedStacktraces"] -git-tree-sha1 = "6bb55eff20ee05151b5cb4e777691fabae1524a3" +deps = ["ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "PrecompileTools", "Preferences", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables", "TruncatedStacktraces"] +git-tree-sha1 = "e803672f8d58e9937f59923dd3b159c9b7e1838b" uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462" -version = "1.91.3" +version = "1.92.0" [[deps.SciMLExpectations]] deps = ["DiffEqBase", "Distributions", "Integrals", "KernelDensity", "LinearAlgebra", "Parameters", "Random", "RecursiveArrayTools", "Reexport", "StaticArrays", "Statistics", "Zygote"] @@ -1849,11 +1909,17 @@ git-tree-sha1 = "6b784198e634859eced71c782115853b9f58b6d3" uuid = "afe9f18d-7609-4d0e-b7b7-af0cb72b8ea8" version = "2.0.1" +[[deps.SciMLNLSolve]] +deps = ["DiffEqBase", "LineSearches", "NLsolve", "Reexport", "SciMLBase"] +git-tree-sha1 = "a8eb97c56cac50c21096582afb2a0110784dc36e" +uuid = "e9a6253c-8580-4d32-9898-8661bb511710" +version = "0.1.6" + [[deps.SciMLOperators]] -deps = ["ArrayInterfaceCore", "DocStringExtensions", "Lazy", "LinearAlgebra", "Setfield", "SparseArrays", "StaticArraysCore", "Tricks"] -git-tree-sha1 = "c737d575c18bdf9aba0a3c7071d5249d09f45dd8" +deps = ["ArrayInterface", "DocStringExtensions", "Lazy", "LinearAlgebra", "Setfield", "SparseArrays", "StaticArraysCore", "Tricks"] +git-tree-sha1 = "90163ebc767cba9f126ea00aeef1d75ed74fe7b0" uuid = "c0aeaf25-5076-4817-a8d5-81caf7dfa961" -version = "0.1.21" +version = "0.2.8" [[deps.ScientificTypesBase]] git-tree-sha1 = "a8e18eb383b5ecf1b5e6fc237eb39255044fd92b" @@ -1891,10 +1957,10 @@ uuid = "777ac1f9-54b0-4bf8-805c-2214025038e7" version = "1.1.0" [[deps.SimpleNonlinearSolve]] -deps = ["ArrayInterfaceCore", "FiniteDiff", "ForwardDiff", "LinearAlgebra", "Reexport", "SciMLBase", "SnoopPrecompile", "StaticArraysCore"] -git-tree-sha1 = "61b8ffdb22453132e02a10c5638dfb42834c776b" +deps = ["ArrayInterface", "DiffEqBase", "FiniteDiff", "ForwardDiff", "LinearAlgebra", "Reexport", "Requires", "SciMLBase", "SnoopPrecompile", "StaticArraysCore"] +git-tree-sha1 = "54c78ac3cc0343a16785adabe5bbf4063c737967" uuid = "727e6d20-b764-4bd8-a329-72de5adea6c7" -version = "0.1.5" +version = "0.1.14" [[deps.SimpleTraits]] deps = ["InteractiveUtils", "MacroTools"] @@ -1933,10 +1999,10 @@ deps = ["LinearAlgebra", "Random"] uuid = "2f01184e-e22b-5df5-ae63-d93ebab69eaf" [[deps.SparseDiffTools]] -deps = ["Adapt", "ArrayInterfaceCore", "ArrayInterfaceStaticArrays", "Compat", "DataStructures", "FiniteDiff", "ForwardDiff", "Graphs", "LinearAlgebra", "Requires", "SparseArrays", "StaticArrays", "VertexSafeGraphs"] -git-tree-sha1 = "4245283bee733122a9cb4545748d64e0c63337c0" +deps = ["Adapt", "ArrayInterface", "Compat", "DataStructures", "FiniteDiff", "ForwardDiff", "Graphs", "LinearAlgebra", "Requires", "SparseArrays", "StaticArrays", "VertexSafeGraphs"] +git-tree-sha1 = "e19ac47477c9a8fcca06dab5e5471417d5d9d723" uuid = "47a9eef4-7e08-11e9-0b38-333d64bd3804" -version = "1.30.0" +version = "1.31.0" [[deps.Sparspak]] deps = ["Libdl", "LinearAlgebra", "Logging", "OffsetArrays", "Printf", "SparseArrays", "Test"] @@ -1969,15 +2035,21 @@ version = "1.0.0" [[deps.Static]] deps = ["IfElse"] -git-tree-sha1 = "08be5ee09a7632c32695d954a602df96a877bf0d" +git-tree-sha1 = "dbde6766fc677423598138a5951269432b0fcc90" uuid = "aedffcd0-7271-4cad-89d0-dc628f76c6d3" -version = "0.8.6" +version = "0.8.7" + +[[deps.StaticArrayInterface]] +deps = ["ArrayInterface", "Compat", "IfElse", "LinearAlgebra", "Requires", "SnoopPrecompile", "SparseArrays", "Static", "SuiteSparse"] +git-tree-sha1 = "33040351d2403b84afce74dae2e22d3f5b18edcb" +uuid = "0d7ed370-da01-4f52-bd93-41d350b8b718" +version = "1.4.0" [[deps.StaticArrays]] deps = ["LinearAlgebra", "Random", "StaticArraysCore", "Statistics"] -git-tree-sha1 = "b8d897fe7fa688e93aef573711cb207c08c9e11e" +git-tree-sha1 = "8982b3607a212b070a5e46eea83eb62b4744ae12" uuid = "90137ffa-7385-5640-81b9-e52037218182" -version = "1.5.19" +version = "1.5.25" [[deps.StaticArraysCore]] git-tree-sha1 = "6b7ba252635a5eff6a0b0664a41ee140a1c9e72a" @@ -1996,9 +2068,9 @@ uuid = "10745b16-79ce-11e8-11f9-7d13ad32a3b2" [[deps.StatsAPI]] deps = ["LinearAlgebra"] -git-tree-sha1 = "f9af7f195fb13589dd2e2d57fdb401717d2eb1f6" +git-tree-sha1 = "45a7769a04a3cf80da1c1c7c60caf932e6f4c9f7" uuid = "82ae8749-77ed-4fe6-ae5f-f523153014b0" -version = "1.5.0" +version = "1.6.0" [[deps.StatsBase]] deps = ["DataAPI", "DataStructures", "LinearAlgebra", "LogExpFunctions", "Missings", "Printf", "Random", "SortingAlgorithms", "SparseArrays", "Statistics", "StatsAPI"] @@ -2013,22 +2085,22 @@ uuid = "4c63d2b9-4356-54db-8cca-17b64c39e42c" version = "1.3.0" [[deps.SteadyStateDiffEq]] -deps = ["DiffEqBase", "DiffEqCallbacks", "EnumX", "LinearAlgebra", "Markdown", "NLsolve", "Reexport", "SciMLBase"] -git-tree-sha1 = "a0cdb38cc0207213a95aa6caa40b3c94ab323f05" +deps = ["DiffEqBase", "DiffEqCallbacks", "LinearAlgebra", "NLsolve", "Reexport", "SciMLBase"] +git-tree-sha1 = "564451a262696334a3bab19108a99dd90d5a22c8" uuid = "9672c7b4-1e72-59bd-8a11-6ac3964bc41f" -version = "1.12.0" +version = "1.15.0" [[deps.StochasticDiffEq]] deps = ["Adapt", "ArrayInterface", "DataStructures", "DiffEqBase", "DiffEqNoiseProcess", "DocStringExtensions", "FillArrays", "FiniteDiff", "ForwardDiff", "JumpProcesses", "LevyArea", "LinearAlgebra", "Logging", "MuladdMacro", "NLsolve", "OrdinaryDiffEq", "Random", "RandomNumbers", "RecursiveArrayTools", "Reexport", "SciMLBase", "SparseArrays", "SparseDiffTools", "StaticArrays", "UnPack"] -git-tree-sha1 = "c6b4b802d4d830e0e958f5f2098d8dea0a935f4b" +git-tree-sha1 = "073da86200349ddf4ef8bc3e3f3acd62e1d554f7" uuid = "789caeaf-c7a9-5a7d-9973-96adeb23e2a0" -version = "6.58.0" +version = "6.60.0" [[deps.StrideArraysCore]] -deps = ["ArrayInterface", "CloseOpenIntervals", "IfElse", "LayoutPointers", "ManualMemory", "SIMDTypes", "Static", "ThreadingUtilities"] -git-tree-sha1 = "8114ba9c3694827838d45ea3c9f6b9ccb4182cf2" +deps = ["ArrayInterface", "CloseOpenIntervals", "IfElse", "LayoutPointers", "ManualMemory", "SIMDTypes", "Static", "StaticArrayInterface", "ThreadingUtilities"] +git-tree-sha1 = "5ffcee1813efc849f188dce82ca1553bd5f3a476" uuid = "7792a7ef-975c-4747-a70f-980b88e8d1da" -version = "0.4.7" +version = "0.4.14" [[deps.StringEncodings]] deps = ["Libiconv_jll"] @@ -2053,6 +2125,12 @@ git-tree-sha1 = "192a9f1de3cfef80ab1a4ba7b150bb0e11ceedcf" uuid = "6ec83bb0-ed9f-11e9-3b4c-2b04cb4e219c" version = "2.1.0" +[[deps.StructIO]] +deps = ["Test"] +git-tree-sha1 = "010dc73c7146869c042b49adcdb6bf528c12e859" +uuid = "53d494c1-5632-5724-8f4c-31dff12d585f" +version = "0.3.0" + [[deps.StructTypes]] deps = ["Dates", "UUIDs"] git-tree-sha1 = "ca4bccb03acf9faaf4137a9abc1881ed1841aa70" @@ -2069,10 +2147,10 @@ uuid = "bea87d4a-7f5b-5778-9afe-8cc45184846c" version = "5.10.1+0" [[deps.Sundials]] -deps = ["CEnum", "DataStructures", "DiffEqBase", "Libdl", "LinearAlgebra", "Logging", "Reexport", "SciMLBase", "SnoopPrecompile", "SparseArrays", "Sundials_jll"] -git-tree-sha1 = "c033830e3c6fb4260243fc907b1e7e93421e7ae8" +deps = ["CEnum", "DataStructures", "DiffEqBase", "Libdl", "LinearAlgebra", "Logging", "PrecompileTools", "Reexport", "SciMLBase", "SparseArrays", "Sundials_jll"] +git-tree-sha1 = "ace8080f882c5181d61c8dbb749ac9aa72a49bd0" uuid = "c3572dad-4567-51f8-b174-8c6c989267f4" -version = "4.15.1" +version = "4.17.0" [[deps.Sundials_jll]] deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "OpenBLAS_jll", "Pkg", "SuiteSparse_jll"] @@ -2088,15 +2166,15 @@ version = "0.2.2" [[deps.SymbolicUtils]] deps = ["AbstractTrees", "Bijections", "ChainRulesCore", "Combinatorics", "ConstructionBase", "DataStructures", "DocStringExtensions", "DynamicPolynomials", "IfElse", "LabelledArrays", "LinearAlgebra", "MultivariatePolynomials", "NaNMath", "Setfield", "SparseArrays", "SpecialFunctions", "StaticArrays", "TimerOutputs", "Unityper"] -git-tree-sha1 = "bfbd444c209b41c7b2fef36b6e146a66da0be9f1" +git-tree-sha1 = "5cb1f963f82e7b81305102dd69472fcd3e0e1483" uuid = "d1185830-fcd6-423d-90d6-eec64667417b" -version = "1.0.4" +version = "1.0.5" [[deps.Symbolics]] deps = ["ArrayInterface", "ConstructionBase", "DataStructures", "DiffRules", "Distributions", "DocStringExtensions", "DomainSets", "Groebner", "IfElse", "LaTeXStrings", "LambertW", "Latexify", "Libdl", "LinearAlgebra", "MacroTools", "Markdown", "NaNMath", "RecipesBase", "Reexport", "Requires", "RuntimeGeneratedFunctions", "SciMLBase", "Setfield", "SparseArrays", "SpecialFunctions", "StaticArrays", "SymbolicUtils", "TreeViews"] -git-tree-sha1 = "fce1fd0b13f860128c8b8aab0bab475eeeeb7994" +git-tree-sha1 = "e23ec62c083ca8f15a4b7174331b3b8d1c511e47" uuid = "0c5d862f-8b57-4792-8d23-62f2024744c7" -version = "5.1.0" +version = "5.3.1" [[deps.TOML]] deps = ["Dates"] @@ -2128,9 +2206,9 @@ version = "0.1.1" [[deps.TerminalLoggers]] deps = ["LeftChildRightSiblingTrees", "Logging", "Markdown", "Printf", "ProgressLogging", "UUIDs"] -git-tree-sha1 = "f53e34e784ae771eb9ccde4d72e578aa453d0554" +git-tree-sha1 = "f133fab380933d042f6796eda4e130272ba520ca" uuid = "5d786b92-1e48-4d6f-9151-6b4477ca9bed" -version = "0.1.6" +version = "0.1.7" [[deps.Test]] deps = ["InteractiveUtils", "Logging", "Random", "Serialization"] @@ -2149,9 +2227,9 @@ version = "0.5.1" [[deps.TimerOutputs]] deps = ["ExprTools", "Printf"] -git-tree-sha1 = "f2fd3f288dfc6f507b0c3a2eb3bac009251e548b" +git-tree-sha1 = "f548a9e9c490030e545f72074a41edfd0e5bcdd7" uuid = "a759f4b9-e2f1-59dc-863e-4aeb61b1ea8f" -version = "0.5.22" +version = "0.5.23" [[deps.Tokenize]] git-tree-sha1 = "90538bf898832b6ebd900fa40f223e695970e3a5" @@ -2160,21 +2238,21 @@ version = "0.5.25" [[deps.Tracker]] deps = ["Adapt", "DiffRules", "ForwardDiff", "Functors", "LinearAlgebra", "LogExpFunctions", "MacroTools", "NNlib", "NaNMath", "Optimisers", "Printf", "Random", "Requires", "SpecialFunctions", "Statistics"] -git-tree-sha1 = "77817887c4b414b9c6914c61273910e3234eb21c" +git-tree-sha1 = "8b552cc0a4132c1ce5cee14197bb57d2109d480f" uuid = "9f7883ad-71c0-57eb-9f7f-b5c9e6d3789c" -version = "0.2.23" +version = "0.2.25" [[deps.TranscodingStreams]] deps = ["Random", "Test"] -git-tree-sha1 = "94f38103c984f89cf77c402f2a68dbd870f8165f" +git-tree-sha1 = "9a6ae7ed916312b41236fcef7e0af564ef934769" uuid = "3bb67fe8-82b1-5028-8e26-92a6c54297fa" -version = "0.9.11" +version = "0.9.13" [[deps.Transducers]] deps = ["Adapt", "ArgCheck", "BangBang", "Baselet", "CompositionsBase", "DefineSingletons", "Distributed", "InitialValues", "Logging", "Markdown", "MicroCollections", "Requires", "Setfield", "SplittablesBase", "Tables"] -git-tree-sha1 = "c42fa452a60f022e9e087823b47e5a5f8adc53d5" +git-tree-sha1 = "25358a5f2384c490e98abd565ed321ffae2cbb37" uuid = "28d57a85-8fef-5791-bfe6-a80928e7c999" -version = "0.4.75" +version = "0.4.76" [[deps.Trapz]] git-tree-sha1 = "79eb0ed763084a3e7de81fe1838379ac6a23b6a0" @@ -2194,9 +2272,9 @@ uuid = "d5829a12-d9aa-46ab-831f-fb7c9ab06edf" version = "0.1.19" [[deps.Tricks]] -git-tree-sha1 = "6bac775f2d42a611cdfcd1fb217ee719630c4175" +git-tree-sha1 = "aadb748be58b492045b4f56166b5188aa63ce549" uuid = "410a4b4d-49e4-4fbc-ab6d-cb71b17b3775" -version = "0.1.6" +version = "0.1.7" [[deps.TruncatedStacktraces]] deps = ["InteractiveUtils", "MacroTools", "Preferences"] @@ -2206,9 +2284,9 @@ version = "1.3.0" [[deps.Turing]] deps = ["AbstractMCMC", "AdvancedHMC", "AdvancedMH", "AdvancedPS", "AdvancedVI", "BangBang", "Bijectors", "DataStructures", "Distributions", "DistributionsAD", "DocStringExtensions", "DynamicPPL", "EllipticalSliceSampling", "ForwardDiff", "Libtask", "LinearAlgebra", "LogDensityProblems", "LogDensityProblemsAD", "MCMCChains", "NamedArrays", "Printf", "Random", "Reexport", "Requires", "SciMLBase", "Setfield", "SpecialFunctions", "Statistics", "StatsBase", "StatsFuns", "Tracker"] -git-tree-sha1 = "bc3e1000da9d84aca4f8ed66cc1dd59b3f793760" +git-tree-sha1 = "26cdfce1cc0301fe832eaa419a5d0edd6a554004" uuid = "fce5fe82-541a-59a6-adf8-730c64b5f9a0" -version = "0.24.3" +version = "0.24.4" [[deps.URIParser]] deps = ["Unicode"] @@ -2241,9 +2319,9 @@ version = "0.4.1" [[deps.Unitful]] deps = ["ConstructionBase", "Dates", "LinearAlgebra", "Random"] -git-tree-sha1 = "bb37ed24f338bc59b83e3fc9f32dd388e5396c53" +git-tree-sha1 = "ba4aa36b2d5c98d6ed1f149da916b3ba46527b2b" uuid = "1986cc42-f94f-5a68-af5c-568840ba703d" -version = "1.12.4" +version = "1.14.0" [[deps.Unityper]] deps = ["ConstructionBase"] @@ -2251,16 +2329,27 @@ git-tree-sha1 = "d5f4ec8c22db63bd3ccb239f640e895cfde145aa" uuid = "a7c27f48-0311-42f6-a7f8-2c11e75eb415" version = "0.1.2" +[[deps.UnsafeAtomics]] +git-tree-sha1 = "6331ac3440856ea1988316b46045303bef658278" +uuid = "013be700-e6cd-48c3-b4a1-df204f14c38f" +version = "0.2.1" + +[[deps.UnsafeAtomicsLLVM]] +deps = ["LLVM", "UnsafeAtomics"] +git-tree-sha1 = "ea37e6066bf194ab78f4e747f5245261f17a7175" +uuid = "d80eeb9a-aca5-4d75-85e5-170c8b632249" +version = "0.1.2" + [[deps.Unzip]] git-tree-sha1 = "ca0969166a028236229f63514992fc073799bb78" uuid = "41fe7b60-77ed-43a1-b4f0-825fd5a5650d" version = "0.2.0" [[deps.VectorizationBase]] -deps = ["ArrayInterface", "CPUSummary", "HostCPUFeatures", "IfElse", "LayoutPointers", "Libdl", "LinearAlgebra", "SIMDTypes", "Static"] -git-tree-sha1 = "4c59c2df8d2676c4691a39fa70495a6db0c5d290" +deps = ["ArrayInterface", "CPUSummary", "HostCPUFeatures", "IfElse", "LayoutPointers", "Libdl", "LinearAlgebra", "SIMDTypes", "Static", "StaticArrayInterface"] +git-tree-sha1 = "b182207d4af54ac64cbc71797765068fdeff475d" uuid = "3d5dd08c-fd9d-11e8-17fa-ed2836048c2f" -version = "0.21.58" +version = "0.21.64" [[deps.VertexSafeGraphs]] deps = ["Graphs"] @@ -2437,15 +2526,15 @@ version = "1.2.12+3" [[deps.Zstd_jll]] deps = ["Artifacts", "JLLWrappers", "Libdl"] -git-tree-sha1 = "c6edfe154ad7b313c01aceca188c05c835c67360" +git-tree-sha1 = "49ce682769cd5de6c72dcf1b94ed7790cd08974c" uuid = "3161d3a3-bdf6-5164-811a-617609db77b4" -version = "1.5.4+0" +version = "1.5.5+0" [[deps.Zygote]] -deps = ["AbstractFFTs", "ChainRules", "ChainRulesCore", "DiffRules", "Distributed", "FillArrays", "ForwardDiff", "GPUArrays", "GPUArraysCore", "IRTools", "InteractiveUtils", "LinearAlgebra", "LogExpFunctions", "MacroTools", "NaNMath", "Random", "Requires", "SnoopPrecompile", "SparseArrays", "SpecialFunctions", "Statistics", "ZygoteRules"] -git-tree-sha1 = "4df8f470806a45a8630ac8f597304821dc8e8838" +deps = ["AbstractFFTs", "ChainRules", "ChainRulesCore", "DiffRules", "Distributed", "FillArrays", "ForwardDiff", "GPUArrays", "GPUArraysCore", "IRTools", "InteractiveUtils", "LinearAlgebra", "LogExpFunctions", "MacroTools", "NaNMath", "PrecompileTools", "Random", "Requires", "SparseArrays", "SpecialFunctions", "Statistics", "ZygoteRules"] +git-tree-sha1 = "ebac1ae9f048c669317ad48c9bed815790a468d8" uuid = "e88e6eb3-aa80-5325-afca-941959d7151f" -version = "0.6.59" +version = "0.6.61" [[deps.ZygoteRules]] deps = ["ChainRulesCore", "MacroTools"]