From 4ae0cd89e259c0a69eaa391203ad143c35e03781 Mon Sep 17 00:00:00 2001 From: ChocoParrot Date: Tue, 14 Sep 2021 09:42:21 +0800 Subject: [PATCH] [factor] v1.7 --- setup.py | 2 +- src/cline_tools/help_pages/orffinder-to-gff3.txt | 2 +- src/cline_tools/help_pages/orffinder-to-gtf.txt | 2 +- src/cline_tools/help_pages/orffinder-to-sequence.txt | 2 +- src/cline_tools/orffinder-to-gff3 | 2 +- src/cline_tools/orffinder-to-gtf | 2 +- src/cline_tools/orffinder-to-sequence | 2 +- 7 files changed, 7 insertions(+), 7 deletions(-) diff --git a/setup.py b/setup.py index 75fcb16..49ec966 100644 --- a/setup.py +++ b/setup.py @@ -7,7 +7,7 @@ setuptools.setup( name="orffinder", - version="1.6", + version="1.7", author="ChocoParrot", author_email="lachocoparrot@gmail.com", description="Open Reading Frame finder natively coded in Python.", diff --git a/src/cline_tools/help_pages/orffinder-to-gff3.txt b/src/cline_tools/help_pages/orffinder-to-gff3.txt index 0c49699..bc13e6d 100644 --- a/src/cline_tools/help_pages/orffinder-to-gff3.txt +++ b/src/cline_tools/help_pages/orffinder-to-gff3.txt @@ -4,7 +4,7 @@ USAGE [-attr_name string] DESCRIPTION - ORFFinder Python v1.6 + ORFFinder Python v1.7 PARAMETERS [-h] diff --git a/src/cline_tools/help_pages/orffinder-to-gtf.txt b/src/cline_tools/help_pages/orffinder-to-gtf.txt index b5db616..b3b1ea9 100644 --- a/src/cline_tools/help_pages/orffinder-to-gtf.txt +++ b/src/cline_tools/help_pages/orffinder-to-gtf.txt @@ -4,7 +4,7 @@ USAGE [-attr_name string] DESCRIPTION - ORFFinder Python v1.6 + ORFFinder Python v1.7 PARAMETERS [-h] diff --git a/src/cline_tools/help_pages/orffinder-to-sequence.txt b/src/cline_tools/help_pages/orffinder-to-sequence.txt index 81a4eea..521e40c 100644 --- a/src/cline_tools/help_pages/orffinder-to-sequence.txt +++ b/src/cline_tools/help_pages/orffinder-to-sequence.txt @@ -4,7 +4,7 @@ USAGE [-attr_name string] [-outtype protein/nucleotide] DESCRIPTION - ORFFinder Python v1.6 + ORFFinder Python v1.7 PARAMETERS [-h] diff --git a/src/cline_tools/orffinder-to-gff3 b/src/cline_tools/orffinder-to-gff3 index fbc4849..bfc604d 100644 --- a/src/cline_tools/orffinder-to-gff3 +++ b/src/cline_tools/orffinder-to-gff3 @@ -60,4 +60,4 @@ try: open(classed_arguments["out"], "w+").write(full_output) except: - print("USAGE\n orffinder-to-gff3 [-in input] [-infmt format] [-out output] [-orf_size int]\n [-remove_nested boolean] [-trim_trailing boolean] [-max_orfs_per_sequence int]\n [-attr_name string]\n\nDESCRIPTION\n ORFFinder Python v1.6\n\nUse '-help' to print detailed descriptions of command line arguments\n========================================================================") + print("USAGE\n orffinder-to-gff3 [-in input] [-infmt format] [-out output] [-orf_size int]\n [-remove_nested boolean] [-trim_trailing boolean] [-max_orfs_per_sequence int]\n [-attr_name string]\n\nDESCRIPTION\n ORFFinder Python v1.7\n\nUse '-help' to print detailed descriptions of command line arguments\n========================================================================") diff --git a/src/cline_tools/orffinder-to-gtf b/src/cline_tools/orffinder-to-gtf index 2decc95..6bbbf54 100644 --- a/src/cline_tools/orffinder-to-gtf +++ b/src/cline_tools/orffinder-to-gtf @@ -60,4 +60,4 @@ try: open(classed_arguments["out"], "w+").write(full_output) except: - print("USAGE\n orffinder-to-gtf [-in input] [-infmt format] [-out output] [-orf_size int]\n [-remove_nested boolean] [-trim_trailing boolean] [-max_orfs_per_sequence int]\n [-attr_name string]\n\nDESCRIPTION\n ORFFinder Python v1.6\n\nUse '-help' to print detailed descriptions of command line arguments\n========================================================================") + print("USAGE\n orffinder-to-gtf [-in input] [-infmt format] [-out output] [-orf_size int]\n [-remove_nested boolean] [-trim_trailing boolean] [-max_orfs_per_sequence int]\n [-attr_name string]\n\nDESCRIPTION\n ORFFinder Python v1.7\n\nUse '-help' to print detailed descriptions of command line arguments\n========================================================================") diff --git a/src/cline_tools/orffinder-to-sequence b/src/cline_tools/orffinder-to-sequence index 2521ba1..ae880a3 100644 --- a/src/cline_tools/orffinder-to-sequence +++ b/src/cline_tools/orffinder-to-sequence @@ -65,4 +65,4 @@ try: SeqIO.write(output, classed_arguments["out"], classed_arguments["outfmt"]) except: - print("USAGE\n orffinder-to-sequence [-in input] [-infmt format] [-out output] [-outfmt format] [-orf_size int]\n [-remove_nested boolean] [-trim_trailing boolean] [-max_orfs_per_sequence int]\n [-attr_name string] [-outtype protein/nucleotide]\n\nDESCRIPTION\n ORFFinder Python v1.6\n\nUse '-help' to print detailed descriptions of command line arguments\n========================================================================") + print("USAGE\n orffinder-to-sequence [-in input] [-infmt format] [-out output] [-outfmt format] [-orf_size int]\n [-remove_nested boolean] [-trim_trailing boolean] [-max_orfs_per_sequence int]\n [-attr_name string] [-outtype protein/nucleotide]\n\nDESCRIPTION\n ORFFinder Python v1.7\n\nUse '-help' to print detailed descriptions of command line arguments\n========================================================================")