From 8b458d7318cc732a715a86fa486415837a2bb666 Mon Sep 17 00:00:00 2001 From: ugur Date: Thu, 12 Dec 2024 14:56:36 +0000 Subject: [PATCH 1/3] Update Clusters.tsv --- src/templates/cl_kg/Clusters.tsv | 353 ------------------------------- 1 file changed, 353 deletions(-) delete mode 100644 src/templates/cl_kg/Clusters.tsv diff --git a/src/templates/cl_kg/Clusters.tsv b/src/templates/cl_kg/Clusters.tsv deleted file mode 100644 index 49f2d69..0000000 --- a/src/templates/cl_kg/Clusters.tsv +++ /dev/null @@ -1,353 +0,0 @@ -ID TYPE Cell_type Marker_set Comment Species -ID TYPE A skos:prefLabel AI CLM:0010000 A rdfs:comment AI RO:0002175 SPLIT=| -http://example.org/68e218e7-b1a6-4533-a239-5355ea2875c4 owl:NamedIndividual Astro CLM:1000062 A Astro in the Human Brain has the gene markers OBI1-AS1 with a NS-Forest FBeta value of 0.957043843s. NCBITaxon:9606 -http://example.org/3e57f2ca-fcaf-4e12-9a13-2d6151dc74bc owl:NamedIndividual Astro CLM:1000062 A Astro in the Human Brain has the gene markers OBI1-AS1 with a NS-Forest FBeta value of 0.957043843s. NCBITaxon:9606 -http://example.org/acf15e43-0dac-4756-abb2-5c93e4718339 owl:NamedIndividual Chandelier CLM:1000063 A Chandelier in the Human Brain has the gene markers GPR149, CA8 with a NS-Forest FBeta value of 0.799748111s. NCBITaxon:9606 -http://example.org/4ed6e7bf-eba3-4a6c-9ac1-7a15b9262b8d owl:NamedIndividual Chandelier CLM:1000063 A Chandelier in the Human Brain has the gene markers GPR149, CA8 with a NS-Forest FBeta value of 0.799748111s. NCBITaxon:9606 -http://example.org/15ea1deb-bf62-44bb-9c52-7f31f264787a owl:NamedIndividual Endo CLM:1000064 A Endo in the Human Brain has the gene markers FLT1, ABCG2 with a NS-Forest FBeta value of 0.923892465s. NCBITaxon:9606 -http://example.org/23b88d49-1d31-4b0f-b46f-a77b72b9baa5 owl:NamedIndividual Endo CLM:1000064 A Endo in the Human Brain has the gene markers FLT1, ABCG2 with a NS-Forest FBeta value of 0.923892465s. NCBITaxon:9606 -http://example.org/c23485c4-1ee9-41f0-abab-37cdd0006242 owl:NamedIndividual L5 ET CLM:1000067 A L5 ET in the Human Brain has the gene markers CHST8, POU3F1 with a NS-Forest FBeta value of 0.815891473s. NCBITaxon:9606 -http://example.org/208a04a9-0f13-40d7-8185-3b829ed5f8ac owl:NamedIndividual L5 ET CLM:1000067 A L5 ET in the Human Brain has the gene markers CHST8, POU3F1 with a NS-Forest FBeta value of 0.815891473s. NCBITaxon:9606 -http://example.org/0027402d-57e0-41b8-984a-20af1202a461 owl:NamedIndividual L5/6 NP CLM:1000069 A L5/6 NP in the Human Brain has the gene markers NPSR1-AS1, TLL1 with a NS-Forest FBeta value of 0.899288218s. NCBITaxon:9606 -http://example.org/027b8a51-3e70-4843-a8b0-90eecf478755 owl:NamedIndividual L5/6 NP CLM:1000069 A L5/6 NP in the Human Brain has the gene markers NPSR1-AS1, TLL1 with a NS-Forest FBeta value of 0.899288218s. NCBITaxon:9606 -http://example.org/872bc20b-c59d-40eb-a258-f2e016896387 owl:NamedIndividual L6 CT CLM:1000070 A L6 CT in the Human Brain has the gene markers SEMA5B, ADAMTSL1, SULF1 with a NS-Forest FBeta value of 0.631898455s. NCBITaxon:9606 -http://example.org/6e37c6a2-5c93-40c1-b8ce-094f7e3a5847 owl:NamedIndividual L6 CT CLM:1000070 A L6 CT in the Human Brain has the gene markers SEMA5B, ADAMTSL1, SULF1 with a NS-Forest FBeta value of 0.631898455s. NCBITaxon:9606 -http://example.org/9bf22b30-e012-48c5-bac2-f71b0ff07746 owl:NamedIndividual L6b CLM:1000073 A L6b in the Human Brain has the gene markers CCN2, ROS1 with a NS-Forest FBeta value of 0.819940964s. NCBITaxon:9606 -http://example.org/fe28676e-2945-42a1-80dc-af999e68c0ad owl:NamedIndividual L6b CLM:1000073 A L6b in the Human Brain has the gene markers CCN2, ROS1 with a NS-Forest FBeta value of 0.819940964s. NCBITaxon:9606 -http://example.org/794f6b2b-326c-4633-a172-20d36702c4fe owl:NamedIndividual Lamp5 CLM:1000074 A Lamp5 in the Human Brain has the gene markers LINC00298, KIT with a NS-Forest FBeta value of 0.814687838s. NCBITaxon:9606 -http://example.org/77b6c96e-bbab-41e4-a1a7-b3f711aabbb4 owl:NamedIndividual Lamp5 CLM:1000074 A Lamp5 in the Human Brain has the gene markers LINC00298, KIT with a NS-Forest FBeta value of 0.814687838s. NCBITaxon:9606 -http://example.org/32dc9e23-7baa-4171-b2fb-634d2e37b7be owl:NamedIndividual Lamp5 Lhx6 CLM:1000075 A Lamp5 Lhx6 in the Human Brain has the gene markers CHST9, LAMP5 with a NS-Forest FBeta value of 0.821678322s. NCBITaxon:9606 -http://example.org/97275027-975c-4154-97b5-8c3f82e62869 owl:NamedIndividual Lamp5 Lhx6 CLM:1000075 A Lamp5 Lhx6 in the Human Brain has the gene markers CHST9, LAMP5 with a NS-Forest FBeta value of 0.821678322s. NCBITaxon:9606 -http://example.org/72d78f3c-2ddd-4fc1-8038-fadc6e4191dd owl:NamedIndividual Micro/PVM CLM:1000076 A Micro/PVM in the Human Brain has the gene markers APBB1IP, DOCK8 with a NS-Forest FBeta value of 0.955105634s. NCBITaxon:9606 -http://example.org/94f43b81-defa-4429-9fba-f3ad92744a2c owl:NamedIndividual Micro/PVM CLM:1000076 A Micro/PVM in the Human Brain has the gene markers APBB1IP, DOCK8 with a NS-Forest FBeta value of 0.955105634s. NCBITaxon:9606 -http://example.org/f8b95da8-0a30-4d21-8f8b-7d1d7700ae88 owl:NamedIndividual OPC CLM:1000077 A OPC in the Human Brain has the gene markers FERMT1 with a NS-Forest FBeta value of 0.741071429s. NCBITaxon:9606 -http://example.org/c02c2fd5-1b8e-4de4-b20b-d41c0ecff09e owl:NamedIndividual OPC CLM:1000077 A OPC in the Human Brain has the gene markers FERMT1 with a NS-Forest FBeta value of 0.741071429s. NCBITaxon:9606 -http://example.org/43b2c6c8-1362-4ee6-8613-9dd5062c50eb owl:NamedIndividual Oligo CLM:1000078 A Oligo in the Human Brain has the gene markers ST18, PLP1 with a NS-Forest FBeta value of 0.97185637s. NCBITaxon:9606 -http://example.org/75a87b58-7db5-4cc1-8dcb-144afd9d4b85 owl:NamedIndividual Oligo CLM:1000078 A Oligo in the Human Brain has the gene markers ST18, PLP1 with a NS-Forest FBeta value of 0.97185637s. NCBITaxon:9606 -http://example.org/c4e21a85-3f5e-430c-b8c5-a77111c0d88b owl:NamedIndividual Pax6 CLM:1000079 A Pax6 in the Human Brain has the gene markers RELN, HCRTR2 with a NS-Forest FBeta value of 0.724125093s. NCBITaxon:9606 -http://example.org/b95946da-cc44-42a2-8603-97e4f9587cc4 owl:NamedIndividual Pax6 CLM:1000079 A Pax6 in the Human Brain has the gene markers RELN, HCRTR2 with a NS-Forest FBeta value of 0.724125093s. NCBITaxon:9606 -http://example.org/eb322609-ad07-45c9-872d-89a97e74b01e owl:NamedIndividual Pvalb CLM:1000080 A Pvalb in the Human Brain has the gene markers PVALB, TAC1, MYO5B with a NS-Forest FBeta value of 0.691998764s. NCBITaxon:9606 -http://example.org/5b4c81b3-24bf-422e-a3f4-5d84c4b4140d owl:NamedIndividual Pvalb CLM:1000080 A Pvalb in the Human Brain has the gene markers PVALB, TAC1, MYO5B with a NS-Forest FBeta value of 0.691998764s. NCBITaxon:9606 -http://example.org/94cf90e9-faf1-4b67-b645-ed77a61b26c2 owl:NamedIndividual Sncg CLM:1000081 A Sncg in the Human Brain has the gene markers RXRG, THSD7B with a NS-Forest FBeta value of 0.628943702s. NCBITaxon:9606 -http://example.org/c19d6f69-e605-42ce-9298-3f9a3e62b579 owl:NamedIndividual Sncg CLM:1000081 A Sncg in the Human Brain has the gene markers RXRG, THSD7B with a NS-Forest FBeta value of 0.628943702s. NCBITaxon:9606 -http://example.org/d9121c36-08b1-4545-87a5-37b473273294 owl:NamedIndividual Sst CLM:1000082 A Sst in the Human Brain has the gene markers SST, PLCH1 with a NS-Forest FBeta value of 0.842367005s. NCBITaxon:9606 -http://example.org/1e6bfaf1-a754-4523-bf1d-38ea1829eee6 owl:NamedIndividual Sst CLM:1000082 A Sst in the Human Brain has the gene markers SST, PLCH1 with a NS-Forest FBeta value of 0.842367005s. NCBITaxon:9606 -http://example.org/70ed5917-b199-4ec2-a386-f224ebabd84f owl:NamedIndividual Sst Chodl CLM:1000083 A Sst Chodl in the Human Brain has the gene markers NPY with a NS-Forest FBeta value of 0.894026187s. NCBITaxon:9606 -http://example.org/a2c38f0c-4a65-477c-ab20-8b0d02c3ed21 owl:NamedIndividual Sst Chodl CLM:1000083 A Sst Chodl in the Human Brain has the gene markers NPY with a NS-Forest FBeta value of 0.894026187s. NCBITaxon:9606 -http://example.org/2f41b00b-27c7-4cb3-a46a-5a5e77fe0e26 owl:NamedIndividual VLMC CLM:1000084 A VLMC in the Human Brain has the gene markers CARMN with a NS-Forest FBeta value of 0.863105175s. NCBITaxon:9606 -http://example.org/1e83c865-43c5-4b9d-b60d-5c1a38d1f443 owl:NamedIndividual VLMC CLM:1000084 A VLMC in the Human Brain has the gene markers CARMN with a NS-Forest FBeta value of 0.863105175s. NCBITaxon:9606 -http://example.org/59171ff9-ff43-4b64-a24f-8b58b9ccdd99 owl:NamedIndividual Vip CLM:1000085 A Vip in the Human Brain has the gene markers VIP with a NS-Forest FBeta value of 0.855531344s. NCBITaxon:9606 -http://example.org/dc0eae21-4900-4745-a48e-f2d173aa4ba2 owl:NamedIndividual Vip CLM:1000085 A Vip in the Human Brain has the gene markers VIP with a NS-Forest FBeta value of 0.855531344s. NCBITaxon:9606 -http://example.org/51915dea-bf5d-4f94-b815-17d278624f43 owl:NamedIndividual Adventitial fibroblasts CLM:1000001 A Adventitial fibroblasts in the Human Lung has the gene markers SCARA5, CD248 with a NS-Forest FBeta value of 0.85s. NCBITaxon:9606 -http://example.org/5a00c58e-24db-48f5-beab-db654b778265 owl:NamedIndividual Alveolar fibroblasts CLM:1000002 A Alveolar fibroblasts in the Human Lung has the gene markers AOC3, LUM with a NS-Forest FBeta value of 0.70s. NCBITaxon:9606 -http://example.org/2d448eff-9ef8-451a-adec-6df983d69ca2 owl:NamedIndividual Alveolar macrophages CLM:1000003 A Alveolar macrophages in the Human Lung has the gene markers MSR1, FABP4 with a NS-Forest FBeta value of 0.80s. NCBITaxon:9606 -http://example.org/cc78ad3d-4993-431a-a874-ecc3dbe1e6b5 owl:NamedIndividual Alveolar macrophages CLM:1000003 A Alveolar macrophages in the Human Lung has the gene markers MSR1, FABP4 with a NS-Forest FBeta value of 0.80s. NCBITaxon:9606 -http://example.org/2f452984-b170-49fa-b888-d7f87cd04e03 owl:NamedIndividual Alveolar Mph CCL3+ CLM:1000004 A Alveolar Mph CCL3+ in the Human Lung has the gene markers TNIP3, CXCL5 with a NS-Forest FBeta value of 0.67s. NCBITaxon:9606 -http://example.org/9fe63e4a-5acd-424e-9529-dbfacc4ccae0 owl:NamedIndividual Alveolar Mph MT-positive CLM:1000005 A Alveolar Mph MT-positive in the Human Lung has the gene markers HMOX1, HPGD with a NS-Forest FBeta value of 0.41s. NCBITaxon:9606 -http://example.org/a6c1f66f-4dec-49f9-8dd8-1163130ffa3c owl:NamedIndividual Alveolar Mph proliferating CLM:1000006 A Alveolar Mph proliferating in the Human Lung has the gene markers PCLAF, RRM2, UBE2C, NUSAP1 with a NS-Forest FBeta value of 0.26s. NCBITaxon:9606 -http://example.org/97082fa7-8eeb-4bdb-9b3a-d50e693ee1dc owl:NamedIndividual AT0 CLM:1000007 A AT0 in the Human Lung has the gene markers HSD17B6, XIST, SCGB3A2 with a NS-Forest FBeta value of 0.28s. NCBITaxon:9606 -http://example.org/40c40961-4a3f-4130-9e26-bff95e998493 owl:NamedIndividual AT1 CLM:1000008 A AT1 in the Human Lung has the gene markers AGER with a NS-Forest FBeta value of 0.85s. NCBITaxon:9606 -http://example.org/df6d8651-e642-45fa-9fa9-eeb9ea209de1 owl:NamedIndividual AT2 CLM:1000009 A AT2 in the Human Lung has the gene markers SFTPA1 with a NS-Forest FBeta value of 0.95s. NCBITaxon:9606 -http://example.org/95a98198-08d8-4800-8eaf-afc4a0475cae owl:NamedIndividual AT2 CLM:1000009 A AT2 in the Human Lung has the gene markers SFTPA1 with a NS-Forest FBeta value of 0.95s. NCBITaxon:9606 -http://example.org/b449f1f9-3b0a-4c96-8a66-1465e499a850 owl:NamedIndividual AT2 proliferating CLM:1000010 A AT2 proliferating in the Human Lung has the gene markers PEG10, PRC1, TOP2A with a NS-Forest FBeta value of 0.61s. NCBITaxon:9606 -http://example.org/761ac72c-caed-4bd9-aec7-275e9f6ca152 owl:NamedIndividual B cells CLM:1000011 A B cells in the Human Lung has the gene markers MS4A1, CD79A with a NS-Forest FBeta value of 0.86s. NCBITaxon:9606 -http://example.org/58716fb2-4237-429e-b38f-db1adf6daab9 owl:NamedIndividual Basal resting CLM:1000012 A Basal resting in the Human Lung has the gene markers KRT15, KRT17 with a NS-Forest FBeta value of 0.75s. NCBITaxon:9606 -http://example.org/1ef3db16-f77e-4805-bd49-90e2d51cbf01 owl:NamedIndividual CD4 T cells CLM:1000013 A CD4 T cells in the Human Lung has the gene markers LTB, CD3D with a NS-Forest FBeta value of 0.59s. NCBITaxon:9606 -http://example.org/a438c795-deaf-4c88-b32e-06ad4cc6b46d owl:NamedIndividual CD8 T cells CLM:1000014 A CD8 T cells in the Human Lung has the gene markers CCL5, CD3D with a NS-Forest FBeta value of 0.76s. NCBITaxon:9606 -http://example.org/59d628d3-9629-41fc-8fbc-3d3adf676d0a owl:NamedIndividual Classical monocytes CLM:1000015 A Classical monocytes in the Human Lung has the gene markers S100A12, FCN1 with a NS-Forest FBeta value of 0.77s. NCBITaxon:9606 -http://example.org/81de57dc-65f5-4014-a757-432a74d25c58 owl:NamedIndividual Club (nasal) CLM:1000016 A Club (nasal) in the Human Lung has the gene markers TFCP2L1, PSCA with a NS-Forest FBeta value of 0.43s. NCBITaxon:9606 -http://example.org/e208050d-fe54-4bff-875b-43f77d17bf51 owl:NamedIndividual Club (non-nasal) CLM:1000017 A Club (non-nasal) in the Human Lung has the gene markers CYP2F1, SCGB1A1 with a NS-Forest FBeta value of 0.68s. NCBITaxon:9606 -http://example.org/3a321ad7-1888-4b01-a3b7-99188a7bd701 owl:NamedIndividual DC1 CLM:1000018 A DC1 in the Human Lung has the gene markers CLEC9A, DNASE1L3 with a NS-Forest FBeta value of 0.77s. NCBITaxon:9606 -http://example.org/9e45c8ba-6ade-41d4-922e-7f710c99ce8a owl:NamedIndividual DC2 CLM:1000019 A DC2 in the Human Lung has the gene markers CLEC10A, HLA-DQA1 with a NS-Forest FBeta value of 0.53s. NCBITaxon:9606 -http://example.org/d35e9a00-11fb-4526-9c1b-1370ef1c5882 owl:NamedIndividual Deuterosomal CLM:1000020 A Deuterosomal in the Human Lung has the gene markers CDC20B, CEP78 with a NS-Forest FBeta value of 0.71s. NCBITaxon:9606 -http://example.org/c6008f39-aef8-4e05-8d50-06881c2b7c5e owl:NamedIndividual EC aerocyte capillary CLM:1000021 A EC aerocyte capillary in the Human Lung has the gene markers EDNRB with a NS-Forest FBeta value of 0.83s. NCBITaxon:9606 -http://example.org/27ca98f6-77ae-4b31-8a0f-6baad7aa15c3 owl:NamedIndividual EC arterial CLM:1000022 A EC arterial in the Human Lung has the gene markers DKK2 with a NS-Forest FBeta value of 0.71s. NCBITaxon:9606 -http://example.org/1f9d3b88-1c24-4ace-8f4c-118e31a87f05 owl:NamedIndividual EC general capillary CLM:1000023 A EC general capillary in the Human Lung has the gene markers FCN3, CA4 with a NS-Forest FBeta value of 0.78s. NCBITaxon:9606 -http://example.org/e96f493f-a505-47d9-a68f-af359b4dc020 owl:NamedIndividual EC venous pulmonary CLM:1000024 A EC venous pulmonary in the Human Lung has the gene markers ACKR1, SRPX with a NS-Forest FBeta value of 0.74s. NCBITaxon:9606 -http://example.org/3a095232-0cbf-41e8-8958-ac2addae1fcd owl:NamedIndividual EC venous systemic CLM:1000025 A EC venous systemic in the Human Lung has the gene markers PLVAP, EMCN with a NS-Forest FBeta value of 0.63s. NCBITaxon:9606 -http://example.org/13122086-061b-4b65-9825-195dec515b7f owl:NamedIndividual Goblet (bronchial) CLM:1000026 A Goblet (bronchial) in the Human Lung has the gene markers PLCG2, ANKRD36C with a NS-Forest FBeta value of 0.55s. NCBITaxon:9606 -http://example.org/a91c9cfc-1d76-4d58-9f33-d7e213bc2602 owl:NamedIndividual Goblet (nasal) CLM:1000027 A Goblet (nasal) in the Human Lung has the gene markers LYPD2, MUC5AC with a NS-Forest FBeta value of 0.81s. NCBITaxon:9606 -http://example.org/6bcac2e9-ca94-4342-b2ba-f169a06ce6d2 owl:NamedIndividual Goblet (subsegmental) CLM:1000028 A Goblet (subsegmental) in the Human Lung has the gene markers MTRNR2L8, SCGB1A1 with a NS-Forest FBeta value of 0.61s. NCBITaxon:9606 -http://example.org/65933b13-741b-4c8a-9b8f-95ccaf50699c owl:NamedIndividual Hematopoietic stem cells CLM:1000029 A Hematopoietic stem cells in the Human Lung has the gene markers CYTL1, FAM30A with a NS-Forest FBeta value of 0.66s. NCBITaxon:9606 -http://example.org/7ce33e68-4880-42a0-9cd3-e14ae536c590 owl:NamedIndividual Hillock-like CLM:1000030 A Hillock-like in the Human Lung has the gene markers KRT14, KRT6A with a NS-Forest FBeta value of 0.66s. NCBITaxon:9606 -http://example.org/1d4a4b12-aabc-4a87-812a-d9e1e44fe6f0 owl:NamedIndividual Ionocyte CLM:1000032 A Ionocyte in the Human Lung has the gene markers ASCL3, BSND with a NS-Forest FBeta value of 0.82s. NCBITaxon:9606 -http://example.org/cd7b17d6-26fe-4a1c-a79e-30f921ed7d1c owl:NamedIndividual Lymphatic EC differentiating CLM:1000033 A Lymphatic EC differentiating in the Human Lung has the gene markers SEMA3D, KALRN with a NS-Forest FBeta value of 0.42s. NCBITaxon:9606 -http://example.org/ca069a16-f319-4a69-9f0b-68cbd852794d owl:NamedIndividual Lymphatic EC mature CLM:1000034 A Lymphatic EC mature in the Human Lung has the gene markers CCL21 with a NS-Forest FBeta value of 0.88s. NCBITaxon:9606 -http://example.org/ba99e73c-b2e6-4cba-ac66-43258571fd4e owl:NamedIndividual Lymphatic EC proliferating CLM:1000035 A Lymphatic EC proliferating in the Human Lung has the gene markers CENPF, CCL21 with a NS-Forest FBeta value of 0.73s. NCBITaxon:9606 -http://example.org/adfe9ec0-e162-49f1-9baa-e3a64d2515ce owl:NamedIndividual Mast cells CLM:1000036 A Mast cells in the Human Lung has the gene markers TPSAB1 with a NS-Forest FBeta value of 0.96s. NCBITaxon:9606 -http://example.org/5b0a2e31-ad33-4746-876e-e0c08bc04f39 owl:NamedIndividual Mesothelium CLM:1000037 A Mesothelium in the Human Lung has the gene markers CALB2, PRG4 with a NS-Forest FBeta value of 0.89s. NCBITaxon:9606 -http://example.org/0c68ab7f-c9dc-4512-ae06-40584a069e76 owl:NamedIndividual Migratory DCs CLM:1000038 A Migratory DCs in the Human Lung has the gene markers CCL22 with a NS-Forest FBeta value of 0.50s. NCBITaxon:9606 -http://example.org/e4c9cbe4-7822-4d73-ae81-bdb9ce5a47b8 owl:NamedIndividual Monocyte-derived Mph CLM:1000039 A Monocyte-derived Mph in the Human Lung has the gene markers C15orf48, CD68 with a NS-Forest FBeta value of 0.37s. NCBITaxon:9606 -http://example.org/82ab9563-45ec-49e1-a862-75f58c66c005 owl:NamedIndividual Multiciliated (nasal) CLM:1000040 A Multiciliated (nasal) in the Human Lung has the gene markers FMO3, MRLN, OMG with a NS-Forest FBeta value of 0.59s. NCBITaxon:9606 -http://example.org/a9e162c0-0ee4-4e76-a6c2-6ee7ce723407 owl:NamedIndividual Multiciliated (non-nasal) CLM:1000041 A Multiciliated (non-nasal) in the Human Lung has the gene markers C1orf194, MS4A8 with a NS-Forest FBeta value of 0.86s. NCBITaxon:9606 -http://example.org/9dd926b6-0891-4a8c-b081-d76501f8f15d owl:NamedIndividual Myofibroblasts CLM:1000042 A Myofibroblasts in the Human Lung has the gene markers ASPN, DKK3, BCHE with a NS-Forest FBeta value of 0.48s. NCBITaxon:9606 -http://example.org/54fe0503-1d47-4b3a-945e-dcd3e02edb07 owl:NamedIndividual Neuroendocrine CLM:1000043 A Neuroendocrine in the Human Lung has the gene markers CHGA, GRP with a NS-Forest FBeta value of 0.94s. NCBITaxon:9606 -http://example.org/9d938e9f-152e-46f6-b2a4-b60c9be20e56 owl:NamedIndividual NK cells CLM:1000044 A NK cells in the Human Lung has the gene markers KLRF1, PRF1 with a NS-Forest FBeta value of 0.79s. NCBITaxon:9606 -http://example.org/571be27e-ad46-4c79-9e9e-840c3242d4bc owl:NamedIndividual Non-classical monocytes CLM:1000045 A Non-classical monocytes in the Human Lung has the gene markers LILRB2, LILRB1 with a NS-Forest FBeta value of 0.46s. NCBITaxon:9606 -http://example.org/75219c79-070e-4db7-9d97-3b66dfba075d owl:NamedIndividual Peribronchial fibroblasts CLM:1000046 A Peribronchial fibroblasts in the Human Lung has the gene markers DPT, APOD with a NS-Forest FBeta value of 0.58s. NCBITaxon:9606 -http://example.org/8cef1166-94a5-4ef6-b92a-0eb75a1078c7 owl:NamedIndividual Pericytes CLM:1000047 A Pericytes in the Human Lung has the gene markers HIGD1B, KCNK3 with a NS-Forest FBeta value of 0.84s. NCBITaxon:9606 -http://example.org/7f19c09a-3c32-4642-aef9-f213e031e0fd owl:NamedIndividual Plasma cells CLM:1000048 A Plasma cells in the Human Lung has the gene markers JCHAIN with a NS-Forest FBeta value of 0.91s. NCBITaxon:9606 -http://example.org/43e4a85a-e6bd-48b0-805c-667d2429cd32 owl:NamedIndividual Plasmacytoid DCs CLM:1000049 A Plasmacytoid DCs in the Human Lung has the gene markers LILRA4, JCHAIN with a NS-Forest FBeta value of 0.79s. NCBITaxon:9606 -http://example.org/38b65b78-8e9c-4e2e-b3b5-cc121efd7805 owl:NamedIndividual pre-TB secretory CLM:1000050 A pre-TB secretory in the Human Lung has the gene markers SCGB1A1, SFTPB with a NS-Forest FBeta value of 0.73s. NCBITaxon:9606 -http://example.org/68a3748e-03ab-464f-84ad-f4c2b3c733b4 owl:NamedIndividual SM activated stress response CLM:1000051 A SM activated stress response in the Human Lung has the gene markers RERGL, C11orf96 with a NS-Forest FBeta value of 0.58s. NCBITaxon:9606 -http://example.org/7a54700f-f9aa-424f-af3d-75fcccb4309e owl:NamedIndividual SMG duct CLM:1000052 A SMG duct in the Human Lung has the gene markers GLYATL2, DMBT1 with a NS-Forest FBeta value of 0.46s. NCBITaxon:9606 -http://example.org/05a161b8-3037-4fc4-a456-435ca9ade8f1 owl:NamedIndividual SMG mucous CLM:1000053 A SMG mucous in the Human Lung has the gene markers BPIFB2 with a NS-Forest FBeta value of 0.93s. NCBITaxon:9606 -http://example.org/6a0dd9b9-02d1-4911-8205-a82cd058279e owl:NamedIndividual SMG serous (bronchial) CLM:1000054 A SMG serous (bronchial) in the Human Lung has the gene markers PRR4, C6orf58 with a NS-Forest FBeta value of 0.75s. NCBITaxon:9606 -http://example.org/8deff728-c5c4-4fc3-bad3-8611f3fde461 owl:NamedIndividual SMG serous (nasal) CLM:1000055 A SMG serous (nasal) in the Human Lung has the gene markers STATH with a NS-Forest FBeta value of 0.92s. NCBITaxon:9606 -http://example.org/493420ec-1b85-4b6b-92b4-c80e9c5185fd owl:NamedIndividual Smooth muscle CLM:1000056 A Smooth muscle in the Human Lung has the gene markers ACTA2, TAGLN with a NS-Forest FBeta value of 0.69s. NCBITaxon:9606 -http://example.org/81a13212-6bc5-419e-9871-1592d73df781 owl:NamedIndividual Smooth muscle CLM:1000056 A Smooth muscle in the Human Lung has the gene markers ACTA2, TAGLN with a NS-Forest FBeta value of 0.69s. NCBITaxon:9606 -http://example.org/09610961-0253-4433-bd68-71662bb7f790 owl:NamedIndividual Smooth muscle FAM83D+ CLM:1000057 A Smooth muscle FAM83D+ in the Human Lung has the gene markers ACTG2 with a NS-Forest FBeta value of 0.77s. NCBITaxon:9606 -http://example.org/ad3ddf07-7c56-4ac2-97ef-37d4c1eeead8 owl:NamedIndividual Subpleural fibroblasts CLM:1000058 A Subpleural fibroblasts in the Human Lung has the gene markers WT1, CXCL12 with a NS-Forest FBeta value of 0.60s. NCBITaxon:9606 -http://example.org/11dd76d5-f155-4853-ad98-0a6ff36dead6 owl:NamedIndividual Suprabasal CLM:1000059 A Suprabasal in the Human Lung has the gene markers TNC, KRT15, SERPINB4 with a NS-Forest FBeta value of 0.62s. NCBITaxon:9606 -http://example.org/ec4ae2f2-2216-44b7-aa0b-d0ee7fa12bca owl:NamedIndividual T cells proliferating CLM:1000060 A T cells proliferating in the Human Lung has the gene markers CD3G, MKI67, PCLAF, CD3E with a NS-Forest FBeta value of 0.71s. NCBITaxon:9606 -http://example.org/fde22c9c-eeb9-4300-89dd-478c36471def owl:NamedIndividual Tuft CLM:1000061 A Tuft in the Human Lung has the gene markers POU2F3, HOMER3, MYB with a NS-Forest FBeta value of 0.56s. NCBITaxon:9606 -http://example.org/869ac50b-cafc-4d75-88ad-398595b34d83 owl:NamedIndividual Astro_1 CLM:1001086 A Astro_1 in the Human Brain has the gene markers SLC1A3, HPSE2 with a NS-Forest FBeta value of 0.6796875s. NCBITaxon:9606 -http://example.org/ffbfb350-4e48-4f7d-99fa-f4c23e3d058e owl:NamedIndividual Astro_1 CLM:1001086 A Astro_1 in the Human Brain has the gene markers SLC1A3, HPSE2 with a NS-Forest FBeta value of 0.6796875s. NCBITaxon:9606 -http://example.org/55b039d5-93e2-48d6-b947-e19be24bc518 owl:NamedIndividual Astro_2 CLM:1001087 A Astro_2 in the Human Brain has the gene markers LINC01411, OBI1-AS1 with a NS-Forest FBeta value of 0.5566801619433198s. NCBITaxon:9606 -http://example.org/a40df9bd-94ed-405d-a0ca-ad30ddd653da owl:NamedIndividual Astro_2 CLM:1001087 A Astro_2 in the Human Brain has the gene markers LINC01411, OBI1-AS1 with a NS-Forest FBeta value of 0.5566801619433198s. NCBITaxon:9606 -http://example.org/a9b19d8f-4433-4605-b2e1-17a2e02eecb6 owl:NamedIndividual Astro_3 CLM:1001088 A Astro_3 in the Human Brain has the gene markers HEPN1, F3, AGT, GJA1, AQP4 with a NS-Forest FBeta value of 0.5711722488038278s. NCBITaxon:9606 -http://example.org/9b216941-f143-4a20-ad48-5fd0d5160a0b owl:NamedIndividual Astro_3 CLM:1001088 A Astro_3 in the Human Brain has the gene markers HEPN1, F3, AGT, GJA1, AQP4 with a NS-Forest FBeta value of 0.5711722488038278s. NCBITaxon:9606 -http://example.org/90dca348-a404-43fc-8a48-1f24a7700056 owl:NamedIndividual Astro_4 CLM:1001089 A Astro_4 in the Human Brain has the gene markers PPP1R3C, ETNPPL, ID4, OBI1-AS1 with a NS-Forest FBeta value of 0.47279792746113986s. NCBITaxon:9606 -http://example.org/6acb9255-58fe-4869-9779-234c1447cd09 owl:NamedIndividual Astro_4 CLM:1001089 A Astro_4 in the Human Brain has the gene markers PPP1R3C, ETNPPL, ID4, OBI1-AS1 with a NS-Forest FBeta value of 0.47279792746113986s. NCBITaxon:9606 -http://example.org/2d458b48-ff97-4f6d-a58c-3d9212b1fda5 owl:NamedIndividual Astro_5 CLM:1001090 A Astro_5 in the Human Brain has the gene markers TNC, CD44 with a NS-Forest FBeta value of 0.7512626262626262s. NCBITaxon:9606 -http://example.org/c4a47d4c-953b-45fd-83bc-e3f0778099b7 owl:NamedIndividual Astro_5 CLM:1001090 A Astro_5 in the Human Brain has the gene markers TNC, CD44 with a NS-Forest FBeta value of 0.7512626262626262s. NCBITaxon:9606 -http://example.org/a156bbb2-771e-4690-a318-80273510245a owl:NamedIndividual Chandelier_1 CLM:1001091 A Chandelier_1 in the Human Brain has the gene markers CA8, GPR149 with a NS-Forest FBeta value of 0.7997481108312343s. NCBITaxon:9606 -http://example.org/97e854f7-3230-436f-8a26-8d5d4dba0913 owl:NamedIndividual Endo_1 CLM:1001092 A Endo_1 in the Human Brain has the gene markers COLEC12, VWF, FLT1, ABCG2 with a NS-Forest FBeta value of 0.831353919239905s. NCBITaxon:9606 -http://example.org/088cb0c8-a385-4a56-84b1-51ba1f77f9fe owl:NamedIndividual Endo_2 CLM:1001093 A Endo_2 in the Human Brain has the gene markers HERC2P3, PRKCH with a NS-Forest FBeta value of 0.8270877944325483s. NCBITaxon:9606 -http://example.org/0dceb01b-4f33-40e4-b27b-c51eaeeed4d9 owl:NamedIndividual L5 ET_1 CLM:1001106 A L5 ET_1 in the Human Brain has the gene markers LINC00922, POU3F1 with a NS-Forest FBeta value of 0.728891820580475s. NCBITaxon:9606 -http://example.org/9ae0a795-764a-4edc-afeb-00e876be49bb owl:NamedIndividual L5 ET_1 CLM:1001106 A L5 ET_1 in the Human Brain has the gene markers LINC00922, POU3F1 with a NS-Forest FBeta value of 0.728891820580475s. NCBITaxon:9606 -http://example.org/1283e885-59de-4dde-af7e-7ac63020b98a owl:NamedIndividual L5 ET_2 CLM:1001107 A L5 ET_2 in the Human Brain has the gene markers ATP6V1C2, LRP2, ST8SIA2 with a NS-Forest FBeta value of 0.7593749999999999s. NCBITaxon:9606 -http://example.org/c323fe58-86a3-4bad-abb8-9b66c579991d owl:NamedIndividual L5 ET_2 CLM:1001107 A L5 ET_2 in the Human Brain has the gene markers ATP6V1C2, LRP2, ST8SIA2 with a NS-Forest FBeta value of 0.7593749999999999s. NCBITaxon:9606 -http://example.org/1a2a3589-cf80-4e28-8426-5d287518a410 owl:NamedIndividual L5 ET_3 CLM:1001108 A L5 ET_3 in the Human Brain has the gene markers ONECUT1, TTC6, SEMA3D, FAM189A2 with a NS-Forest FBeta value of 0.8891454965357967s. NCBITaxon:9606 -http://example.org/2ea6164b-d4e0-4ce2-bbcf-0151f02495bc owl:NamedIndividual L5 ET_3 CLM:1001108 A L5 ET_3 in the Human Brain has the gene markers ONECUT1, TTC6, SEMA3D, FAM189A2 with a NS-Forest FBeta value of 0.8891454965357967s. NCBITaxon:9606 -http://example.org/e027a73f-c419-4e79-9bd3-39126ef0d574 owl:NamedIndividual L5 ET_4 CLM:1001109 A L5 ET_4 in the Human Brain has the gene markers EHF, FGF11 with a NS-Forest FBeta value of 0.7297605473204105s. NCBITaxon:9606 -http://example.org/8e85bfaa-5338-4ecf-b79e-5c3410ba8872 owl:NamedIndividual L5/6 NP_1 CLM:1001116 A L5/6 NP_1 in the Human Brain has the gene markers BARX2, CD36, NPSR1-AS1 with a NS-Forest FBeta value of 0.49025974025974034s. NCBITaxon:9606 -http://example.org/f9d30080-627d-4bfd-8950-cd6755b7f685 owl:NamedIndividual L5/6 NP_1 CLM:1001116 A L5/6 NP_1 in the Human Brain has the gene markers BARX2, CD36, NPSR1-AS1 with a NS-Forest FBeta value of 0.49025974025974034s. NCBITaxon:9606 -http://example.org/f2b14676-6896-4bdc-ba56-98ca3b38466f owl:NamedIndividual L5/6 NP_2 CLM:1001117 A L5/6 NP_2 in the Human Brain has the gene markers SLC17A6, CRYM with a NS-Forest FBeta value of 0.4607508532423208s. NCBITaxon:9606 -http://example.org/d5c7e2e6-7ac2-44ee-ae71-c39860bdbb14 owl:NamedIndividual L5/6 NP_2 CLM:1001117 A L5/6 NP_2 in the Human Brain has the gene markers SLC17A6, CRYM with a NS-Forest FBeta value of 0.4607508532423208s. NCBITaxon:9606 -http://example.org/6640ef4e-1597-40b3-9929-f90f51be90a5 owl:NamedIndividual L5/6 NP_3 CLM:1001118 A L5/6 NP_3 in the Human Brain has the gene markers NPSR1-AS1, PLPP3, KIT with a NS-Forest FBeta value of 0.5273892773892773s. NCBITaxon:9606 -http://example.org/d50e3377-3022-41ec-85fa-074f704d8bc1 owl:NamedIndividual L5/6 NP_3 CLM:1001118 A L5/6 NP_3 in the Human Brain has the gene markers NPSR1-AS1, PLPP3, KIT with a NS-Forest FBeta value of 0.5273892773892773s. NCBITaxon:9606 -http://example.org/c1d3ad7e-8790-4820-9f62-492a54b3d61e owl:NamedIndividual L5/6 NP_4 CLM:1001119 A L5/6 NP_4 in the Human Brain has the gene markers FSHR, CLMN, TLL1 with a NS-Forest FBeta value of 0.740632318501171s. NCBITaxon:9606 -http://example.org/e1b4b3fc-3fc2-4a55-82b9-1f5f23d956ed owl:NamedIndividual L5/6 NP_4 CLM:1001119 A L5/6 NP_4 in the Human Brain has the gene markers FSHR, CLMN, TLL1 with a NS-Forest FBeta value of 0.740632318501171s. NCBITaxon:9606 -http://example.org/18e767cd-f4b3-4ccd-a75b-b1e75caf5148 owl:NamedIndividual L5/6 NP_5 CLM:1001120 A L5/6 NP_5 in the Human Brain has the gene markers COL9A1, NPSR1, TLL1 with a NS-Forest FBeta value of 0.5373831775700935s. NCBITaxon:9606 -http://example.org/88eeea7e-ca35-410b-a967-31bc49eccb89 owl:NamedIndividual L5/6 NP_5 CLM:1001120 A L5/6 NP_5 in the Human Brain has the gene markers COL9A1, NPSR1, TLL1 with a NS-Forest FBeta value of 0.5373831775700935s. NCBITaxon:9606 -http://example.org/f07984d6-a208-4758-b07b-c09c35692989 owl:NamedIndividual L5/6 NP_6 CLM:1001121 A L5/6 NP_6 in the Human Brain has the gene markers NPSR1-AS1, ARHGAP42 with a NS-Forest FBeta value of 0.7685614849187936s. NCBITaxon:9606 -http://example.org/0a314e5d-3a14-4f15-8b65-257364ebd00d owl:NamedIndividual L6 CT_1 CLM:1001122 A L6 CT_1 in the Human Brain has the gene markers LGR6, OR1Q1, SULF1 with a NS-Forest FBeta value of 0.665374677002584s. NCBITaxon:9606 -http://example.org/fb64acf9-51f0-426a-a485-ce36cbf7c7e2 owl:NamedIndividual L6 CT_1 CLM:1001122 A L6 CT_1 in the Human Brain has the gene markers LGR6, OR1Q1, SULF1 with a NS-Forest FBeta value of 0.665374677002584s. NCBITaxon:9606 -http://example.org/308ae08d-30c3-414e-a631-1b290511c8be owl:NamedIndividual L6 CT_2 CLM:1001123 A L6 CT_2 in the Human Brain has the gene markers SYT6, ITGA11, SEMA5B with a NS-Forest FBeta value of 0.791868932038835s. NCBITaxon:9606 -http://example.org/57bc5b03-85a3-4230-b633-836e9519a0c1 owl:NamedIndividual L6 CT_2 CLM:1001123 A L6 CT_2 in the Human Brain has the gene markers SYT6, ITGA11, SEMA5B with a NS-Forest FBeta value of 0.791868932038835s. NCBITaxon:9606 -http://example.org/8b287903-a06f-403c-aa36-ac717fdabfe2 owl:NamedIndividual L6 CT_3 CLM:1001124 A L6 CT_3 in the Human Brain has the gene markers SULF1, MEIS2, ADAMTSL1, KCNH5 with a NS-Forest FBeta value of 0.632267441860465s. NCBITaxon:9606 -http://example.org/7a138515-4560-44d8-8237-e9d231725c20 owl:NamedIndividual L6 CT_3 CLM:1001124 A L6 CT_3 in the Human Brain has the gene markers SULF1, MEIS2, ADAMTSL1, KCNH5 with a NS-Forest FBeta value of 0.632267441860465s. NCBITaxon:9606 -http://example.org/8a9e959e-ffd1-47d0-9008-a0cd7207c056 owl:NamedIndividual L6b_1 CLM:1001129 A L6b_1 in the Human Brain has the gene markers SEMA3D, ITGA11, FAM160A1 with a NS-Forest FBeta value of 0.5724637681159421s. NCBITaxon:9606 -http://example.org/e62ca0d3-edde-4ea2-b39b-ba66f9f0e47a owl:NamedIndividual L6b_1 CLM:1001129 A L6b_1 in the Human Brain has the gene markers SEMA3D, ITGA11, FAM160A1 with a NS-Forest FBeta value of 0.5724637681159421s. NCBITaxon:9606 -http://example.org/fd550edc-0e7e-4bc2-b4ec-f22f7fb4e9b4 owl:NamedIndividual L6b_2 CLM:1001130 A L6b_2 in the Human Brain has the gene markers NPFFR2, ROS1 with a NS-Forest FBeta value of 0.565711462450593s. NCBITaxon:9606 -http://example.org/ffe2a345-c5e8-4788-9262-c92cb4fa5338 owl:NamedIndividual L6b_2 CLM:1001130 A L6b_2 in the Human Brain has the gene markers NPFFR2, ROS1 with a NS-Forest FBeta value of 0.565711462450593s. NCBITaxon:9606 -http://example.org/e83996b8-3411-4196-90db-fb63059e393a owl:NamedIndividual L6b_3 CLM:1001131 A L6b_3 in the Human Brain has the gene markers SLC15A5, ATP10A with a NS-Forest FBeta value of 0.6928969359331476s. NCBITaxon:9606 -http://example.org/91c4361f-dcee-4702-8c6e-9e81a7d9bf1b owl:NamedIndividual L6b_3 CLM:1001131 A L6b_3 in the Human Brain has the gene markers SLC15A5, ATP10A with a NS-Forest FBeta value of 0.6928969359331476s. NCBITaxon:9606 -http://example.org/068a3001-0916-43f7-ba1c-cf9677184f09 owl:NamedIndividual L6b_4 CLM:1001132 A L6b_4 in the Human Brain has the gene markers NR4A2, ATP8B4 with a NS-Forest FBeta value of 0.5812101910828025s. NCBITaxon:9606 -http://example.org/f5ad64f1-2724-4897-9806-2b62077b3e1c owl:NamedIndividual L6b_4 CLM:1001132 A L6b_4 in the Human Brain has the gene markers NR4A2, ATP8B4 with a NS-Forest FBeta value of 0.5812101910828025s. NCBITaxon:9606 -http://example.org/59b8e231-2f2a-4f17-9e4c-558c6ff072aa owl:NamedIndividual L6b_5 CLM:1001133 A L6b_5 in the Human Brain has the gene markers NXPH4, NR4A2, SEMA3E with a NS-Forest FBeta value of 0.5693519079345852s. NCBITaxon:9606 -http://example.org/162cb0d5-95b8-4cc8-9180-d904256fc2db owl:NamedIndividual L6b_5 CLM:1001133 A L6b_5 in the Human Brain has the gene markers NXPH4, NR4A2, SEMA3E with a NS-Forest FBeta value of 0.5693519079345852s. NCBITaxon:9606 -http://example.org/a355fc01-e244-499e-84b8-71ef1944c95d owl:NamedIndividual L6b_6 CLM:1001134 A L6b_6 in the Human Brain has the gene markers PCOLCE2, FAM160A1, SULF1 with a NS-Forest FBeta value of 0.570388349514563s. NCBITaxon:9606 -http://example.org/48237448-b3c2-41fb-ba13-3b92f772ceb4 owl:NamedIndividual L6b_6 CLM:1001134 A L6b_6 in the Human Brain has the gene markers PCOLCE2, FAM160A1, SULF1 with a NS-Forest FBeta value of 0.570388349514563s. NCBITaxon:9606 -http://example.org/c1a17133-2fa0-4f7c-909a-81e2f96bb313 owl:NamedIndividual Lamp5 Lhx6_1 CLM:1001135 A Lamp5 Lhx6_1 in the Human Brain has the gene markers CHST9, LAMP5 with a NS-Forest FBeta value of 0.8216783216783217s. NCBITaxon:9606 -http://example.org/f33fb9fe-c03c-42a3-b025-9492d41846ca owl:NamedIndividual Lamp5_1 CLM:1001136 A Lamp5_1 in the Human Brain has the gene markers ADAMTS20, KIT, FREM1 with a NS-Forest FBeta value of 0.48856548856548865s. NCBITaxon:9606 -http://example.org/65ad63f8-e3a8-44f4-b32e-845df5449162 owl:NamedIndividual Lamp5_1 CLM:1001136 A Lamp5_1 in the Human Brain has the gene markers ADAMTS20, KIT, FREM1 with a NS-Forest FBeta value of 0.48856548856548865s. NCBITaxon:9606 -http://example.org/e51c03ab-4861-46cd-9b48-628154bcd1ef owl:NamedIndividual Lamp5_2 CLM:1001137 A Lamp5_2 in the Human Brain has the gene markers PBX3, KIT with a NS-Forest FBeta value of 0.7316272965879266s. NCBITaxon:9606 -http://example.org/389e37ce-2de6-47f4-88f9-5ce07fa627a0 owl:NamedIndividual Lamp5_2 CLM:1001137 A Lamp5_2 in the Human Brain has the gene markers PBX3, KIT with a NS-Forest FBeta value of 0.7316272965879266s. NCBITaxon:9606 -http://example.org/db46e30c-cb4e-4bb6-9665-3a28f4fe5bb3 owl:NamedIndividual Lamp5_3 CLM:1001138 A Lamp5_3 in the Human Brain has the gene markers CA2, CPLX3, LAMP5 with a NS-Forest FBeta value of 0.6311576354679802s. NCBITaxon:9606 -http://example.org/4257b6bb-8850-4a27-a4ec-3b135706307c owl:NamedIndividual Lamp5_3 CLM:1001138 A Lamp5_3 in the Human Brain has the gene markers CA2, CPLX3, LAMP5 with a NS-Forest FBeta value of 0.6311576354679802s. NCBITaxon:9606 -http://example.org/1a62f1c4-089b-498c-88e0-e5688ed9c312 owl:NamedIndividual Lamp5_4 CLM:1001139 A Lamp5_4 in the Human Brain has the gene markers ROR2, TRPC3, FBXL7, LINC00298 with a NS-Forest FBeta value of 0.40425531914893614s. NCBITaxon:9606 -http://example.org/b1e21fc9-3b33-4e7a-a48c-975522c51a6a owl:NamedIndividual Lamp5_4 CLM:1001139 A Lamp5_4 in the Human Brain has the gene markers ROR2, TRPC3, FBXL7, LINC00298 with a NS-Forest FBeta value of 0.40425531914893614s. NCBITaxon:9606 -http://example.org/75c50a24-2bf1-40ad-b88b-89db61c291f6 owl:NamedIndividual Lamp5_5 CLM:1001140 A Lamp5_5 in the Human Brain has the gene markers NDNF, NPNT, LAMP5 with a NS-Forest FBeta value of 0.6249999999999999s. NCBITaxon:9606 -http://example.org/24472afb-7704-434f-8fc0-ead00419704d owl:NamedIndividual Lamp5_5 CLM:1001140 A Lamp5_5 in the Human Brain has the gene markers NDNF, NPNT, LAMP5 with a NS-Forest FBeta value of 0.6249999999999999s. NCBITaxon:9606 -http://example.org/504c1fa9-a4a3-4fdd-b8e9-823f43950925 owl:NamedIndividual Lamp5_6 CLM:1001141 A Lamp5_6 in the Human Brain has the gene markers NDNF, KIT, TRPC3 with a NS-Forest FBeta value of 0.6357493857493858s. NCBITaxon:9606 -http://example.org/a4ce7c05-0645-46d9-b686-65498c887ff8 owl:NamedIndividual Lamp5_6 CLM:1001141 A Lamp5_6 in the Human Brain has the gene markers NDNF, KIT, TRPC3 with a NS-Forest FBeta value of 0.6357493857493858s. NCBITaxon:9606 -http://example.org/da6215c4-7a9c-4e65-87af-7c7742209017 owl:NamedIndividual Lamp5_7 CLM:1001142 A Lamp5_7 in the Human Brain has the gene markers MYH11, MT-ND4L, KIT with a NS-Forest FBeta value of 0.42241379310344834s. NCBITaxon:9606 -http://example.org/8a16650e-17c2-4f1b-9fee-d4c04e542478 owl:NamedIndividual Oligo_1 CLM:1001145 A Oligo_1 in the Human Brain has the gene markers CERCAM, DOCK5 with a NS-Forest FBeta value of 0.24613623354321695s. NCBITaxon:9606 -http://example.org/671e8785-3001-4073-bdd8-024367184e68 owl:NamedIndividual Oligo_1 CLM:1001145 A Oligo_1 in the Human Brain has the gene markers CERCAM, DOCK5 with a NS-Forest FBeta value of 0.24613623354321695s. NCBITaxon:9606 -http://example.org/24194559-3f98-4228-aa9b-20e9bd34adde owl:NamedIndividual Oligo_2 CLM:1001146 A Oligo_2 in the Human Brain has the gene markers MBOAT1, PLP1 with a NS-Forest FBeta value of 0.8189655172413793s. NCBITaxon:9606 -http://example.org/01ab16fe-0dc8-473e-901d-dced0a36c9dd owl:NamedIndividual Oligo_2 CLM:1001146 A Oligo_2 in the Human Brain has the gene markers MBOAT1, PLP1 with a NS-Forest FBeta value of 0.8189655172413793s. NCBITaxon:9606 -http://example.org/f6c7b34d-eaaf-42ec-a4d7-f1d85b011c0f owl:NamedIndividual Oligo_3 CLM:1001147 A Oligo_3 in the Human Brain has the gene markers OPALIN, LINC01170 with a NS-Forest FBeta value of 0.713610586011342s. NCBITaxon:9606 -http://example.org/7f9b0f4d-4dc1-4ecc-ab44-0c55c19c140a owl:NamedIndividual Oligo_3 CLM:1001147 A Oligo_3 in the Human Brain has the gene markers OPALIN, LINC01170 with a NS-Forest FBeta value of 0.713610586011342s. NCBITaxon:9606 -http://example.org/9793a313-432c-4e79-991f-e37ba148c6f5 owl:NamedIndividual Oligo_4 CLM:1001148 A Oligo_4 in the Human Brain has the gene markers OPALIN, TRIM59, CERCAM with a NS-Forest FBeta value of 0.5434782608695652s. NCBITaxon:9606 -http://example.org/6e998bae-8655-4876-830f-7f6004f62735 owl:NamedIndividual Oligo_4 CLM:1001148 A Oligo_4 in the Human Brain has the gene markers OPALIN, TRIM59, CERCAM with a NS-Forest FBeta value of 0.5434782608695652s. NCBITaxon:9606 -http://example.org/c877ff8a-5933-49bd-bb6d-dbf9da1b4561 owl:NamedIndividual Pax6_1 CLM:1001149 A Pax6_1 in the Human Brain has the gene markers IGFBP7, EPS8, HCRTR2 with a NS-Forest FBeta value of 0.767426273458445s. NCBITaxon:9606 -http://example.org/662b227f-9c26-48d0-85bd-8283a03573d9 owl:NamedIndividual Pax6_1 CLM:1001149 A Pax6_1 in the Human Brain has the gene markers IGFBP7, EPS8, HCRTR2 with a NS-Forest FBeta value of 0.767426273458445s. NCBITaxon:9606 -http://example.org/95488329-c1bd-4fe8-9c58-429cdcea4e56 owl:NamedIndividual Pax6_2 CLM:1001150 A Pax6_2 in the Human Brain has the gene markers TGFBR2, BCHE, RELN with a NS-Forest FBeta value of 0.7676056338028169s. NCBITaxon:9606 -http://example.org/9b09cb4d-d5cf-4534-bdad-1ee50830b2b4 owl:NamedIndividual Pax6_2 CLM:1001150 A Pax6_2 in the Human Brain has the gene markers TGFBR2, BCHE, RELN with a NS-Forest FBeta value of 0.7676056338028169s. NCBITaxon:9606 -http://example.org/af030ed6-2635-4e00-a762-0c9b51eb4f83 owl:NamedIndividual Pax6_3 CLM:1001151 A Pax6_3 in the Human Brain has the gene markers PBX3, PDLIM5, FBN2 with a NS-Forest FBeta value of 0.7090163934426228s. NCBITaxon:9606 -http://example.org/9622e78f-f55c-410c-8cee-669bc8bad04b owl:NamedIndividual Pax6_3 CLM:1001151 A Pax6_3 in the Human Brain has the gene markers PBX3, PDLIM5, FBN2 with a NS-Forest FBeta value of 0.7090163934426228s. NCBITaxon:9606 -http://example.org/751b3710-48de-48ba-b111-5d2aee6dfdb2 owl:NamedIndividual Pax6_4 CLM:1001152 A Pax6_4 in the Human Brain has the gene markers PALMD, RELN with a NS-Forest FBeta value of 0.8731422505307855s. NCBITaxon:9606 -http://example.org/a8ffb67e-9822-43bb-bd5a-3fcde90c6a5c owl:NamedIndividual Pax6_4 CLM:1001152 A Pax6_4 in the Human Brain has the gene markers PALMD, RELN with a NS-Forest FBeta value of 0.8731422505307855s. NCBITaxon:9606 -http://example.org/5363023d-2a34-4af5-8fff-0023af7216b4 owl:NamedIndividual Pvalb_1 CLM:1001153 A Pvalb_1 in the Human Brain has the gene markers MYBPC1, GPR149, SVIL with a NS-Forest FBeta value of 0.6944444444444444s. NCBITaxon:9606 -http://example.org/e8f4438d-8d50-46a5-addd-1cc220b445de owl:NamedIndividual Pvalb_1 CLM:1001153 A Pvalb_1 in the Human Brain has the gene markers MYBPC1, GPR149, SVIL with a NS-Forest FBeta value of 0.6944444444444444s. NCBITaxon:9606 -http://example.org/4f7672a5-9b79-4d48-84e5-ceb6f2940582 owl:NamedIndividual Pvalb_2 CLM:1001154 A Pvalb_2 in the Human Brain has the gene markers BCHE, SEMA3C, GPC5 with a NS-Forest FBeta value of 0.7717391304347827s. NCBITaxon:9606 -http://example.org/9e70bc7e-430d-4f13-9ef5-a227c640d592 owl:NamedIndividual Pvalb_2 CLM:1001154 A Pvalb_2 in the Human Brain has the gene markers BCHE, SEMA3C, GPC5 with a NS-Forest FBeta value of 0.7717391304347827s. NCBITaxon:9606 -http://example.org/1b9a88fa-489c-4638-8dcf-d048ffe9b2b9 owl:NamedIndividual Pvalb_3 CLM:1001155 A Pvalb_3 in the Human Brain has the gene markers TAFA4, SYT10, ANOS1, HTR4 with a NS-Forest FBeta value of 0.635593220338983s. NCBITaxon:9606 -http://example.org/6cae250e-47da-4f3c-bcf5-0680109a77bc owl:NamedIndividual Pvalb_3 CLM:1001155 A Pvalb_3 in the Human Brain has the gene markers TAFA4, SYT10, ANOS1, HTR4 with a NS-Forest FBeta value of 0.635593220338983s. NCBITaxon:9606 -http://example.org/0dfccb77-623b-4af4-92a5-d02b9941432b owl:NamedIndividual Pvalb_4 CLM:1001156 A Pvalb_4 in the Human Brain has the gene markers MT-ND4L, RGS5_ENSG00000143248, WIF1, TAC1 with a NS-Forest FBeta value of 0.4390934844192635s. NCBITaxon:9606 -http://example.org/54a00dae-0f18-4e97-bd19-3e5c6870c5ed owl:NamedIndividual Pvalb_4 CLM:1001156 A Pvalb_4 in the Human Brain has the gene markers MT-ND4L, RGS5_ENSG00000143248, WIF1, TAC1 with a NS-Forest FBeta value of 0.4390934844192635s. NCBITaxon:9606 -http://example.org/8d8bfb96-a128-471d-84d8-0afa5a21c6d2 owl:NamedIndividual Pvalb_5 CLM:1001157 A Pvalb_5 in the Human Brain has the gene markers SNTB1, COBLL1, GPR149, TAC1 with a NS-Forest FBeta value of 0.6364329268292682s. NCBITaxon:9606 -http://example.org/387cc996-d53d-4915-8287-38dc5bcf53bf owl:NamedIndividual Pvalb_5 CLM:1001157 A Pvalb_5 in the Human Brain has the gene markers SNTB1, COBLL1, GPR149, TAC1 with a NS-Forest FBeta value of 0.6364329268292682s. NCBITaxon:9606 -http://example.org/6933d7de-7084-47aa-9b33-c852a24dfe84 owl:NamedIndividual Pvalb_6 CLM:1001158 A Pvalb_6 in the Human Brain has the gene markers POSTN, SULF1, CEMIP, RNF144B with a NS-Forest FBeta value of 0.29255319148936176s. NCBITaxon:9606 -http://example.org/72874686-99a5-4040-b224-388e67289791 owl:NamedIndividual Pvalb_6 CLM:1001158 A Pvalb_6 in the Human Brain has the gene markers POSTN, SULF1, CEMIP, RNF144B with a NS-Forest FBeta value of 0.29255319148936176s. NCBITaxon:9606 -http://example.org/07aaef07-92bb-457a-8478-414e045f3133 owl:NamedIndividual Pvalb_7 CLM:1001159 A Pvalb_7 in the Human Brain has the gene markers SULF1, ZNF385D-AS2 with a NS-Forest FBeta value of 0.5650087260034904s. NCBITaxon:9606 -http://example.org/8bc44c96-d456-44f3-96b4-887e711012bd owl:NamedIndividual Pvalb_7 CLM:1001159 A Pvalb_7 in the Human Brain has the gene markers SULF1, ZNF385D-AS2 with a NS-Forest FBeta value of 0.5650087260034904s. NCBITaxon:9606 -http://example.org/5f095659-97ae-43b5-b5f9-66b4eb0f5262 owl:NamedIndividual Pvalb_8 CLM:1001160 A Pvalb_8 in the Human Brain has the gene markers CA8, FGFR2, TAC1 with a NS-Forest FBeta value of 0.5676733780760627s. NCBITaxon:9606 -http://example.org/ba1a83d9-f011-4dd5-a858-1fe040418f04 owl:NamedIndividual Pvalb_8 CLM:1001160 A Pvalb_8 in the Human Brain has the gene markers CA8, FGFR2, TAC1 with a NS-Forest FBeta value of 0.5676733780760627s. NCBITaxon:9606 -http://example.org/8c75d9b8-1e9e-4374-b798-5fd1da561b2b owl:NamedIndividual Pvalb_9 CLM:1001161 A Pvalb_9 in the Human Brain has the gene markers PVALB, POSTN with a NS-Forest FBeta value of 0.5845323741007195s. NCBITaxon:9606 -http://example.org/206659ec-f42b-4579-b959-eb29571ae5bb owl:NamedIndividual Pvalb_9 CLM:1001161 A Pvalb_9 in the Human Brain has the gene markers PVALB, POSTN with a NS-Forest FBeta value of 0.5845323741007195s. NCBITaxon:9606 -http://example.org/fceedb33-231b-4d01-a463-696faed0af93 owl:NamedIndividual Sncg_1 CLM:1001162 A Sncg_1 in the Human Brain has the gene markers UNC5B, TAFA4, THSD7B with a NS-Forest FBeta value of 0.5883947939262474s. NCBITaxon:9606 -http://example.org/cd8458ae-2b00-4c9d-b037-15eb3a7d102a owl:NamedIndividual Sncg_1 CLM:1001162 A Sncg_1 in the Human Brain has the gene markers UNC5B, TAFA4, THSD7B with a NS-Forest FBeta value of 0.5883947939262474s. NCBITaxon:9606 -http://example.org/5b0fa9ca-41e2-4cbf-8150-5eacead7b1e2 owl:NamedIndividual Sncg_2 CLM:1001163 A Sncg_2 in the Human Brain has the gene markers FOXO1, CA10, PRELID2, THSD7B with a NS-Forest FBeta value of 0.7396788990825688s. NCBITaxon:9606 -http://example.org/4f4cca9c-aa01-4c5d-81c4-bb6014acc820 owl:NamedIndividual Sncg_2 CLM:1001163 A Sncg_2 in the Human Brain has the gene markers FOXO1, CA10, PRELID2, THSD7B with a NS-Forest FBeta value of 0.7396788990825688s. NCBITaxon:9606 -http://example.org/a3ef505e-8720-4ec2-94a4-9fcc8c953041 owl:NamedIndividual Sncg_3 CLM:1001164 A Sncg_3 in the Human Brain has the gene markers SEMA3C, MYO1B, VAV3 with a NS-Forest FBeta value of 0.4528985507246377s. NCBITaxon:9606 -http://example.org/58496165-7a56-4e6d-bd50-1c3a8c9dc8f1 owl:NamedIndividual Sncg_3 CLM:1001164 A Sncg_3 in the Human Brain has the gene markers SEMA3C, MYO1B, VAV3 with a NS-Forest FBeta value of 0.4528985507246377s. NCBITaxon:9606 -http://example.org/b8383956-4bfc-4ab2-a8bc-417a31cf65ac owl:NamedIndividual Sncg_4 CLM:1001165 A Sncg_4 in the Human Brain has the gene markers LINC01539, DCN, THSD7B with a NS-Forest FBeta value of 0.6752411575562701s. NCBITaxon:9606 -http://example.org/8906bcc7-65c7-4064-89a4-d6ebc4c36df1 owl:NamedIndividual Sncg_4 CLM:1001165 A Sncg_4 in the Human Brain has the gene markers LINC01539, DCN, THSD7B with a NS-Forest FBeta value of 0.6752411575562701s. NCBITaxon:9606 -http://example.org/6284d436-fd2f-4bdf-810b-d2e1ade07747 owl:NamedIndividual Sncg_5 CLM:1001166 A Sncg_5 in the Human Brain has the gene markers COL5A2, TMEM47, MEGF11 with a NS-Forest FBeta value of 0.5214285714285715s. NCBITaxon:9606 -http://example.org/1fe05063-7cc8-4085-9c90-426ec4a6b0fa owl:NamedIndividual Sncg_5 CLM:1001166 A Sncg_5 in the Human Brain has the gene markers COL5A2, TMEM47, MEGF11 with a NS-Forest FBeta value of 0.5214285714285715s. NCBITaxon:9606 -http://example.org/8f491902-82c4-482c-bc39-891b804084fa owl:NamedIndividual Sncg_6 CLM:1001167 A Sncg_6 in the Human Brain has the gene markers THSD7B, ADAMTSL1, RELN with a NS-Forest FBeta value of 0.5738434163701067s. NCBITaxon:9606 -http://example.org/fa92a775-679a-4b07-bcce-0bd5a44d4307 owl:NamedIndividual Sncg_6 CLM:1001167 A Sncg_6 in the Human Brain has the gene markers THSD7B, ADAMTSL1, RELN with a NS-Forest FBeta value of 0.5738434163701067s. NCBITaxon:9606 -http://example.org/b8c205d7-8a30-454b-b330-34283aa3ae9f owl:NamedIndividual Sncg_7 CLM:1001168 A Sncg_7 in the Human Brain has the gene markers HTR3A, SYT9, MCTP2 with a NS-Forest FBeta value of 0.7097791798107256s. NCBITaxon:9606 -http://example.org/14f8f999-2363-45c7-b8f6-2e5d657da249 owl:NamedIndividual Sncg_7 CLM:1001168 A Sncg_7 in the Human Brain has the gene markers HTR3A, SYT9, MCTP2 with a NS-Forest FBeta value of 0.7097791798107256s. NCBITaxon:9606 -http://example.org/ad7851ab-7e7d-4f83-a3a4-525e32543915 owl:NamedIndividual Sncg_8 CLM:1001169 A Sncg_8 in the Human Brain has the gene markers NDST4, HTR2C, PRELID2 with a NS-Forest FBeta value of 0.49476135040745045s. NCBITaxon:9606 -http://example.org/55249b58-791c-4a2a-a405-f119fe3aab6e owl:NamedIndividual Sncg_8 CLM:1001169 A Sncg_8 in the Human Brain has the gene markers NDST4, HTR2C, PRELID2 with a NS-Forest FBeta value of 0.49476135040745045s. NCBITaxon:9606 -http://example.org/699653f9-337e-4c77-818b-8666c575560d owl:NamedIndividual Sst Chodl_1 CLM:1001170 A Sst Chodl_1 in the Human Brain has the gene markers NPY with a NS-Forest FBeta value of 0.894026186579378s. NCBITaxon:9606 -http://example.org/701a1c10-768d-4d50-8586-b52df10a4978 owl:NamedIndividual Sst_1 CLM:1001171 A Sst_1 in the Human Brain has the gene markers NDST4, ANGPT1, EPB41L4A with a NS-Forest FBeta value of 0.5104166666666666s. NCBITaxon:9606 -http://example.org/ca699e85-095b-4fd6-9f5f-1627e558ab20 owl:NamedIndividual Sst_1 CLM:1001171 A Sst_1 in the Human Brain has the gene markers NDST4, ANGPT1, EPB41L4A with a NS-Forest FBeta value of 0.5104166666666666s. NCBITaxon:9606 -http://example.org/6080f460-e801-4f87-8103-71d19d67706d owl:NamedIndividual Sst_2 CLM:1001172 A Sst_2 in the Human Brain has the gene markers HPGD, RGS5_ENSG00000143248, SPON1 with a NS-Forest FBeta value of 0.5613577023498695s. NCBITaxon:9606 -http://example.org/eacd3042-3c6d-4d4f-9f4e-1c4d9deecd1d owl:NamedIndividual Sst_2 CLM:1001172 A Sst_2 in the Human Brain has the gene markers HPGD, RGS5_ENSG00000143248, SPON1 with a NS-Forest FBeta value of 0.5613577023498695s. NCBITaxon:9606 -http://example.org/83088ff0-4f05-4506-9f89-476f36907eee owl:NamedIndividual Sst_3 CLM:1001173 A Sst_3 in the Human Brain has the gene markers TCF7L1, FBXL7, CBLN2 with a NS-Forest FBeta value of 0.6936997319034853s. NCBITaxon:9606 -http://example.org/1e758963-0383-4d66-ab30-a61aa36d6c92 owl:NamedIndividual Sst_3 CLM:1001173 A Sst_3 in the Human Brain has the gene markers TCF7L1, FBXL7, CBLN2 with a NS-Forest FBeta value of 0.6936997319034853s. NCBITaxon:9606 -http://example.org/54742535-fe02-4dec-8ca8-3b706bbf2c0c owl:NamedIndividual Sst_4 CLM:1001174 A Sst_4 in the Human Brain has the gene markers SCARA5, PIEZO2, CRYBG3, PLCH1 with a NS-Forest FBeta value of 0.5479002624671917s. NCBITaxon:9606 -http://example.org/d57aeec6-33b6-4d0e-b50a-b5db40f8bf43 owl:NamedIndividual Sst_4 CLM:1001174 A Sst_4 in the Human Brain has the gene markers SCARA5, PIEZO2, CRYBG3, PLCH1 with a NS-Forest FBeta value of 0.5479002624671917s. NCBITaxon:9606 -http://example.org/687a43d5-0670-49ac-a744-9decf3ca5be6 owl:NamedIndividual Sst_5 CLM:1001175 A Sst_5 in the Human Brain has the gene markers SH3RF2, NPY, CALB1 with a NS-Forest FBeta value of 0.5248833592534992s. NCBITaxon:9606 -http://example.org/d225cb81-3352-4d63-bec0-852d59718f70 owl:NamedIndividual Sst_5 CLM:1001175 A Sst_5 in the Human Brain has the gene markers SH3RF2, NPY, CALB1 with a NS-Forest FBeta value of 0.5248833592534992s. NCBITaxon:9606 -http://example.org/899a0cfc-c01e-402e-aabf-18929b3370a5 owl:NamedIndividual Sst_6 CLM:1001176 A Sst_6 in the Human Brain has the gene markers DPP4, MAFB with a NS-Forest FBeta value of 0.38520801232665647s. NCBITaxon:9606 -http://example.org/6faa9fa7-e27d-4757-a275-07792ff7d143 owl:NamedIndividual Sst_6 CLM:1001176 A Sst_6 in the Human Brain has the gene markers DPP4, MAFB with a NS-Forest FBeta value of 0.38520801232665647s. NCBITaxon:9606 -http://example.org/f0afb72a-6110-44e3-8279-908c10d22540 owl:NamedIndividual Sst_7 CLM:1001177 A Sst_7 in the Human Brain has the gene markers EPSTI1, PIEZO2, HPSE2, PLCH1 with a NS-Forest FBeta value of 0.4469696969696969s. NCBITaxon:9606 -http://example.org/bcc29a1a-4745-498b-8809-204b15f1e37f owl:NamedIndividual Sst_7 CLM:1001177 A Sst_7 in the Human Brain has the gene markers EPSTI1, PIEZO2, HPSE2, PLCH1 with a NS-Forest FBeta value of 0.4469696969696969s. NCBITaxon:9606 -http://example.org/0a59c033-64c5-48e5-8bf6-51149ef29eb6 owl:NamedIndividual Sst_8 CLM:1001178 A Sst_8 in the Human Brain has the gene markers STK32A, SYT9, RELN with a NS-Forest FBeta value of 0.5061619718309859s. NCBITaxon:9606 -http://example.org/4e1c63a6-c2c4-47aa-9c12-7b5a98309712 owl:NamedIndividual Sst_8 CLM:1001178 A Sst_8 in the Human Brain has the gene markers STK32A, SYT9, RELN with a NS-Forest FBeta value of 0.5061619718309859s. NCBITaxon:9606 -http://example.org/33c796d1-d754-445f-86a9-626032186884 owl:NamedIndividual Sst_9 CLM:1001179 A Sst_9 in the Human Brain has the gene markers MYO10, ARHGAP6, FREM1 with a NS-Forest FBeta value of 0.3506097560975609s. NCBITaxon:9606 -http://example.org/016fd372-edea-4ab2-b3cf-4a0ed6d41aaa owl:NamedIndividual Sst_9 CLM:1001179 A Sst_9 in the Human Brain has the gene markers MYO10, ARHGAP6, FREM1 with a NS-Forest FBeta value of 0.3506097560975609s. NCBITaxon:9606 -http://example.org/b09fb3ba-53d1-4ed7-8331-7bdfeb583a8a owl:NamedIndividual Sst_10 CLM:1001180 A Sst_10 in the Human Brain has the gene markers HPSE2, EYA4, SST, PLCH1 with a NS-Forest FBeta value of 0.3615384615384615s. NCBITaxon:9606 -http://example.org/dd133cc7-2339-486d-876d-4f35d74db39b owl:NamedIndividual Sst_10 CLM:1001180 A Sst_10 in the Human Brain has the gene markers HPSE2, EYA4, SST, PLCH1 with a NS-Forest FBeta value of 0.3615384615384615s. NCBITaxon:9606 -http://example.org/ca4942a6-512b-420c-ae1c-1d5bfc3b2207 owl:NamedIndividual Sst_11 CLM:1001181 A Sst_11 in the Human Brain has the gene markers ADGRG6, PROM1, SYT9 with a NS-Forest FBeta value of 0.34898477157360397s. NCBITaxon:9606 -http://example.org/a5e35661-75fc-4874-abfc-fcffcc3fb7af owl:NamedIndividual Sst_11 CLM:1001181 A Sst_11 in the Human Brain has the gene markers ADGRG6, PROM1, SYT9 with a NS-Forest FBeta value of 0.34898477157360397s. NCBITaxon:9606 -http://example.org/9d1ffaca-f68f-4ccc-96d8-e6b6f7d174ca owl:NamedIndividual Sst_12 CLM:1001182 A Sst_12 in the Human Brain has the gene markers CBLN4, SLC24A4, EYS, PLCH1 with a NS-Forest FBeta value of 0.34348441926345613s. NCBITaxon:9606 -http://example.org/e5ccdcff-a98b-4199-8733-0e5f8325eb7d owl:NamedIndividual Sst_12 CLM:1001182 A Sst_12 in the Human Brain has the gene markers CBLN4, SLC24A4, EYS, PLCH1 with a NS-Forest FBeta value of 0.34348441926345613s. NCBITaxon:9606 -http://example.org/5861e31b-2f69-47f7-b807-45484d5f4dad owl:NamedIndividual Sst_13 CLM:1001183 A Sst_13 in the Human Brain has the gene markers FBN2, TRPC6, EPB41L4A with a NS-Forest FBeta value of 0.5461876832844575s. NCBITaxon:9606 -http://example.org/0274bba0-db99-469c-9052-8c5576edbf75 owl:NamedIndividual Sst_13 CLM:1001183 A Sst_13 in the Human Brain has the gene markers FBN2, TRPC6, EPB41L4A with a NS-Forest FBeta value of 0.5461876832844575s. NCBITaxon:9606 -http://example.org/1acbddd4-a8d7-4b0b-9bc9-c5b82f1cba93 owl:NamedIndividual Sst_14 CLM:1001184 A Sst_14 in the Human Brain has the gene markers SLC9A2, ROR1, EYA4 with a NS-Forest FBeta value of 0.46314741035856577s. NCBITaxon:9606 -http://example.org/70921b59-1c01-47bc-a0a4-693fa1836939 owl:NamedIndividual Sst_14 CLM:1001184 A Sst_14 in the Human Brain has the gene markers SLC9A2, ROR1, EYA4 with a NS-Forest FBeta value of 0.46314741035856577s. NCBITaxon:9606 -http://example.org/4832d15f-6d1b-4849-856e-cb93fd94b36b owl:NamedIndividual Sst_15 CLM:1001185 A Sst_15 in the Human Brain has the gene markers DPP4, EPB41L4A, FREM1, PLCH1 with a NS-Forest FBeta value of 0.45995670995671s. NCBITaxon:9606 -http://example.org/e574def7-fbe8-4797-99c8-108077aaa3e3 owl:NamedIndividual Sst_15 CLM:1001185 A Sst_15 in the Human Brain has the gene markers DPP4, EPB41L4A, FREM1, PLCH1 with a NS-Forest FBeta value of 0.45995670995671s. NCBITaxon:9606 -http://example.org/55dfcf21-0b2d-4446-b1db-1d186a74fb8d owl:NamedIndividual Sst_16 CLM:1001186 A Sst_16 in the Human Brain has the gene markers LINC01630, DACH1, VAV3 with a NS-Forest FBeta value of 0.6000000000000001s. NCBITaxon:9606 -http://example.org/934f40e4-efea-4297-a90e-700413174d69 owl:NamedIndividual Sst_16 CLM:1001186 A Sst_16 in the Human Brain has the gene markers LINC01630, DACH1, VAV3 with a NS-Forest FBeta value of 0.6000000000000001s. NCBITaxon:9606 -http://example.org/a815bee3-62db-402c-9467-322ca721a209 owl:NamedIndividual Sst_17 CLM:1001187 A Sst_17 in the Human Brain has the gene markers PROM1, EYA2, PLCH1 with a NS-Forest FBeta value of 0.40226063829787234s. NCBITaxon:9606 -http://example.org/9cfa1b8a-fa09-4637-b666-b88225732eeb owl:NamedIndividual Sst_17 CLM:1001187 A Sst_17 in the Human Brain has the gene markers PROM1, EYA2, PLCH1 with a NS-Forest FBeta value of 0.40226063829787234s. NCBITaxon:9606 -http://example.org/35b26e63-bd4a-4fe4-b3bc-80ad4a55c831 owl:NamedIndividual Sst_18 CLM:1001188 A Sst_18 in the Human Brain has the gene markers ENOX2, PNOC, SST, RELN with a NS-Forest FBeta value of 0.34307875894988066s. NCBITaxon:9606 -http://example.org/621caebd-8dd1-4b89-8132-aab3795efc0c owl:NamedIndividual Sst_18 CLM:1001188 A Sst_18 in the Human Brain has the gene markers ENOX2, PNOC, SST, RELN with a NS-Forest FBeta value of 0.34307875894988066s. NCBITaxon:9606 -http://example.org/e8cacf2f-536b-4d76-9550-f917a4999aa4 owl:NamedIndividual Sst_19 CLM:1001189 A Sst_19 in the Human Brain has the gene markers EPB41L4A, GPC5, PLCH1 with a NS-Forest FBeta value of 0.7339449541284404s. NCBITaxon:9606 -http://example.org/c33ef4eb-10fc-4521-8c7a-721952166b32 owl:NamedIndividual Sst_19 CLM:1001189 A Sst_19 in the Human Brain has the gene markers EPB41L4A, GPC5, PLCH1 with a NS-Forest FBeta value of 0.7339449541284404s. NCBITaxon:9606 -http://example.org/d9c4603c-1c49-4155-bd76-0f0ade4ceafa owl:NamedIndividual Sst_20 CLM:1001190 A Sst_20 in the Human Brain has the gene markers QRFPR, HGF, RELN with a NS-Forest FBeta value of 0.4671717171717172s. NCBITaxon:9606 -http://example.org/c9229e9e-646b-4edf-9a40-3c1974fa7466 owl:NamedIndividual Sst_20 CLM:1001190 A Sst_20 in the Human Brain has the gene markers QRFPR, HGF, RELN with a NS-Forest FBeta value of 0.4671717171717172s. NCBITaxon:9606 -http://example.org/57ceabc9-cb75-4253-85f4-3ef7186635ec owl:NamedIndividual Sst_21 CLM:1001191 A Sst_21 in the Human Brain has the gene markers ANGPT1, FBN2, COL24A1 with a NS-Forest FBeta value of 0.48315602836879434s. NCBITaxon:9606 -http://example.org/ca26bea1-fdd3-4efd-b025-6b55c620aadb owl:NamedIndividual Sst_21 CLM:1001191 A Sst_21 in the Human Brain has the gene markers ANGPT1, FBN2, COL24A1 with a NS-Forest FBeta value of 0.48315602836879434s. NCBITaxon:9606 -http://example.org/224fdeea-6e5b-4e53-a193-2648ba422dfe owl:NamedIndividual Sst_22 CLM:1001192 A Sst_22 in the Human Brain has the gene markers EPB41L4A, ITGA8, SST with a NS-Forest FBeta value of 0.4351032448377581s. NCBITaxon:9606 -http://example.org/92c25169-b510-4bfd-b4ef-7fba9f3ffe39 owl:NamedIndividual Sst_22 CLM:1001192 A Sst_22 in the Human Brain has the gene markers EPB41L4A, ITGA8, SST with a NS-Forest FBeta value of 0.4351032448377581s. NCBITaxon:9606 -http://example.org/9327815f-41e4-4b26-b08c-3ceea7b093e3 owl:NamedIndividual Sst_23 CLM:1001193 A Sst_23 in the Human Brain has the gene markers NIBAN1, PROM1, THSD7B with a NS-Forest FBeta value of 0.6134686346863469s. NCBITaxon:9606 -http://example.org/fb9540fc-84b9-4e2e-a6fb-f46580892354 owl:NamedIndividual Sst_23 CLM:1001193 A Sst_23 in the Human Brain has the gene markers NIBAN1, PROM1, THSD7B with a NS-Forest FBeta value of 0.6134686346863469s. NCBITaxon:9606 -http://example.org/e3b0c7a0-dbd4-4ae7-8890-400d4164bb0d owl:NamedIndividual Sst_24 CLM:1001194 A Sst_24 in the Human Brain has the gene markers NDST4, BMP6, MYO5B with a NS-Forest FBeta value of 0.37790697674418605s. NCBITaxon:9606 -http://example.org/d33e232a-c423-42af-a211-5ae4b1514a3f owl:NamedIndividual Sst_24 CLM:1001194 A Sst_24 in the Human Brain has the gene markers NDST4, BMP6, MYO5B with a NS-Forest FBeta value of 0.37790697674418605s. NCBITaxon:9606 -http://example.org/d4ec9c07-632e-4e2e-8d5d-0c9a13c4e114 owl:NamedIndividual Sst_25 CLM:1001195 A Sst_25 in the Human Brain has the gene markers BLM, CALB1, STK32B with a NS-Forest FBeta value of 0.45689655172413796s. NCBITaxon:9606 -http://example.org/6024bb92-e066-4c6f-bb81-5c614be639d3 owl:NamedIndividual Sst_25 CLM:1001195 A Sst_25 in the Human Brain has the gene markers BLM, CALB1, STK32B with a NS-Forest FBeta value of 0.45689655172413796s. NCBITaxon:9606 -http://example.org/e4cc6ff8-e09e-4837-9e4a-6220471561aa owl:NamedIndividual Sst_26 CLM:1001196 A Sst_26 in the Human Brain has the gene markers MME, FBN2, MCUB with a NS-Forest FBeta value of 0.2326233183856502s. NCBITaxon:9606 -http://example.org/d1b2e909-ebd6-403a-aaf2-a644da8bdbb7 owl:NamedIndividual Sst_26 CLM:1001196 A Sst_26 in the Human Brain has the gene markers MME, FBN2, MCUB with a NS-Forest FBeta value of 0.2326233183856502s. NCBITaxon:9606 -http://example.org/63a55b06-687e-4521-83f8-1f61adef6e2c owl:NamedIndividual Sst_27 CLM:1001197 A Sst_27 in the Human Brain has the gene markers EDNRA, MT-ND5, FREM1, SST with a NS-Forest FBeta value of 0.39168937329700276s. NCBITaxon:9606 -http://example.org/a9fff2bf-8e91-491b-9071-b9cbcf161ae3 owl:NamedIndividual Sst_27 CLM:1001197 A Sst_27 in the Human Brain has the gene markers EDNRA, MT-ND5, FREM1, SST with a NS-Forest FBeta value of 0.39168937329700276s. NCBITaxon:9606 -http://example.org/a8b6e59a-d469-42d7-857b-e7c890408e53 owl:NamedIndividual Sst_28 CLM:1001198 A Sst_28 in the Human Brain has the gene markers PROM1, NDST4, TRPC6 with a NS-Forest FBeta value of 0.5884615384615385s. NCBITaxon:9606 -http://example.org/3ef3a5cc-f2a5-432a-b330-45ce01c00d39 owl:NamedIndividual Sst_28 CLM:1001198 A Sst_28 in the Human Brain has the gene markers PROM1, NDST4, TRPC6 with a NS-Forest FBeta value of 0.5884615384615385s. NCBITaxon:9606 -http://example.org/ba314ffb-86b0-4f7a-a09a-60e5872a7ff0 owl:NamedIndividual Sst_29 CLM:1001199 A Sst_29 in the Human Brain has the gene markers ENPP1, QRFPR, PIEZO2 with a NS-Forest FBeta value of 0.41353383458646614s. NCBITaxon:9606 -http://example.org/15f75f2b-e5cc-4034-8d9a-3f9da063e966 owl:NamedIndividual Sst_29 CLM:1001199 A Sst_29 in the Human Brain has the gene markers ENPP1, QRFPR, PIEZO2 with a NS-Forest FBeta value of 0.41353383458646614s. NCBITaxon:9606 -http://example.org/88a96e50-9748-43ed-8556-11671d3f62d0 owl:NamedIndividual Sst_30 CLM:1001200 A Sst_30 in the Human Brain has the gene markers NOTCH2, HTR2C, FBN2 with a NS-Forest FBeta value of 0.4063786008230453s. NCBITaxon:9606 -http://example.org/ed2f64cf-98e5-4029-9027-c4ce6616793e owl:NamedIndividual Sst_30 CLM:1001200 A Sst_30 in the Human Brain has the gene markers NOTCH2, HTR2C, FBN2 with a NS-Forest FBeta value of 0.4063786008230453s. NCBITaxon:9606 -http://example.org/9d3a3bbd-0374-449a-aa6e-dcd2dbcbc99a owl:NamedIndividual Sst_31 CLM:1001201 A Sst_31 in the Human Brain has the gene markers FRZB, CBLN4, RGS5_ENSG00000143248, ARHGAP10 with a NS-Forest FBeta value of 0.4743083003952569s. NCBITaxon:9606 -http://example.org/6d289c03-0476-40c6-9740-f38ce36ee205 owl:NamedIndividual Sst_31 CLM:1001201 A Sst_31 in the Human Brain has the gene markers FRZB, CBLN4, RGS5_ENSG00000143248, ARHGAP10 with a NS-Forest FBeta value of 0.4743083003952569s. NCBITaxon:9606 -http://example.org/494a401d-12c2-4da4-9cf8-c05f359924ca owl:NamedIndividual Sst_32 CLM:1001202 A Sst_32 in the Human Brain has the gene markers HPGD, PENK, EYA2 with a NS-Forest FBeta value of 0.40567282321899734s. NCBITaxon:9606 -http://example.org/ff92840f-3be0-4810-94ae-a61109c9bdab owl:NamedIndividual Sst_32 CLM:1001202 A Sst_32 in the Human Brain has the gene markers HPGD, PENK, EYA2 with a NS-Forest FBeta value of 0.40567282321899734s. NCBITaxon:9606 -http://example.org/5a7c0753-1703-4df7-bc5d-4387302a9ba9 owl:NamedIndividual Sst_33 CLM:1001203 A Sst_33 in the Human Brain has the gene markers CRYBG3, BMP6, HTR2C with a NS-Forest FBeta value of 0.39086687306501544s. NCBITaxon:9606 -http://example.org/60e82f71-d0a8-498e-ad08-0f1119bf0b57 owl:NamedIndividual Sst_33 CLM:1001203 A Sst_33 in the Human Brain has the gene markers CRYBG3, BMP6, HTR2C with a NS-Forest FBeta value of 0.39086687306501544s. NCBITaxon:9606 -http://example.org/9204cd8b-078d-4693-9bd1-7994e97c2a63 owl:NamedIndividual Sst_34 CLM:1001204 A Sst_34 in the Human Brain has the gene markers TTC29, TCF7L1 with a NS-Forest FBeta value of 0.565749235474006s. NCBITaxon:9606 -http://example.org/351b7150-94e2-4433-a24e-3e5f1da5ce85 owl:NamedIndividual Sst_34 CLM:1001204 A Sst_34 in the Human Brain has the gene markers TTC29, TCF7L1 with a NS-Forest FBeta value of 0.565749235474006s. NCBITaxon:9606 -http://example.org/80e52ac5-90dd-4ce3-9638-9ecf8e7b1539 owl:NamedIndividual Sst_35 CLM:1001205 A Sst_35 in the Human Brain has the gene markers ACVR1C, EYA2, TRIM67 with a NS-Forest FBeta value of 0.5226480836236933s. NCBITaxon:9606 -http://example.org/f5cab1b7-d139-4503-a17b-8a3f7caa68b2 owl:NamedIndividual Sst_35 CLM:1001205 A Sst_35 in the Human Brain has the gene markers ACVR1C, EYA2, TRIM67 with a NS-Forest FBeta value of 0.5226480836236933s. NCBITaxon:9606 -http://example.org/14aad0d2-f017-4203-af34-8ee5485d91af owl:NamedIndividual Sst_36 CLM:1001206 A Sst_36 in the Human Brain has the gene markers TRDN, ITGA1, PARD3B, PLCH1 with a NS-Forest FBeta value of 0.6381381381381382s. NCBITaxon:9606 -http://example.org/920d8f23-d2b5-446b-bc25-b21dfddc1859 owl:NamedIndividual Sst_36 CLM:1001206 A Sst_36 in the Human Brain has the gene markers TRDN, ITGA1, PARD3B, PLCH1 with a NS-Forest FBeta value of 0.6381381381381382s. NCBITaxon:9606 -http://example.org/9aa8fe87-e17d-48bc-8263-6ea0ecbfc28e owl:NamedIndividual Sst_37 CLM:1001207 A Sst_37 in the Human Brain has the gene markers PROM1, CRHBP, SST with a NS-Forest FBeta value of 0.5s. NCBITaxon:9606 -http://example.org/f7ade78b-3994-4972-ac3a-f36cf9431404 owl:NamedIndividual Sst_37 CLM:1001207 A Sst_37 in the Human Brain has the gene markers PROM1, CRHBP, SST with a NS-Forest FBeta value of 0.5s. NCBITaxon:9606 -http://example.org/e48cf0e4-e156-4d71-929e-8f0bc8d4ed88 owl:NamedIndividual VLMC_1 CLM:1001208 A VLMC_1 in the Human Brain has the gene markers TAGLN, ACTA2 with a NS-Forest FBeta value of 0.8559498956158662s. NCBITaxon:9606 -http://example.org/07c20a1f-7c01-4d7f-b176-6d792a2d4129 owl:NamedIndividual VLMC_1 CLM:1001208 A VLMC_1 in the Human Brain has the gene markers TAGLN, ACTA2 with a NS-Forest FBeta value of 0.8559498956158662s. NCBITaxon:9606 -http://example.org/2a10771a-5357-4041-89fc-c42a197f85c6 owl:NamedIndividual VLMC_2 CLM:1001209 A VLMC_2 in the Human Brain has the gene markers SLC19A1, COLEC12 with a NS-Forest FBeta value of 0.876753507014028s. NCBITaxon:9606 -http://example.org/3c077be9-c44f-42fd-81c3-66babe4ae6e6 owl:NamedIndividual VLMC_2 CLM:1001209 A VLMC_2 in the Human Brain has the gene markers SLC19A1, COLEC12 with a NS-Forest FBeta value of 0.876753507014028s. NCBITaxon:9606 -http://example.org/7716ea6e-9ae4-4960-ab8f-f080e0fbbed9 owl:NamedIndividual Vip_1 CLM:1001210 A Vip_1 in the Human Brain has the gene markers FLT1, LRRC1, SHISA8 with a NS-Forest FBeta value of 0.400763358778626s. NCBITaxon:9606 -http://example.org/1b3acfac-9a86-4c6d-9059-851e8cbb55b7 owl:NamedIndividual Vip_1 CLM:1001210 A Vip_1 in the Human Brain has the gene markers FLT1, LRRC1, SHISA8 with a NS-Forest FBeta value of 0.400763358778626s. NCBITaxon:9606 -http://example.org/b148344f-8287-429d-a834-5e76ccda5458 owl:NamedIndividual Vip_2 CLM:1001211 A Vip_2 in the Human Brain has the gene markers IGFBP5, SLC22A3, PTGDS, VIP with a NS-Forest FBeta value of 0.4741379310344827s. NCBITaxon:9606 -http://example.org/72a732fb-ae22-483b-a301-cb17cc0e1b45 owl:NamedIndividual Vip_2 CLM:1001211 A Vip_2 in the Human Brain has the gene markers IGFBP5, SLC22A3, PTGDS, VIP with a NS-Forest FBeta value of 0.4741379310344827s. NCBITaxon:9606 -http://example.org/9ac8d71e-af5d-4f5d-8f9b-74d0a7d91785 owl:NamedIndividual Vip_3 CLM:1001212 A Vip_3 in the Human Brain has the gene markers HPSE2, TRPC6, VIP with a NS-Forest FBeta value of 0.40249999999999997s. NCBITaxon:9606 -http://example.org/82ac6dd7-1d50-43f4-b058-a83028ba41c7 owl:NamedIndividual Vip_3 CLM:1001212 A Vip_3 in the Human Brain has the gene markers HPSE2, TRPC6, VIP with a NS-Forest FBeta value of 0.40249999999999997s. NCBITaxon:9606 -http://example.org/722cbf7f-40b8-4709-a9a3-bbc70c39af1a owl:NamedIndividual Vip_4 CLM:1001213 A Vip_4 in the Human Brain has the gene markers WNT5A, ABI3BP, VCAN with a NS-Forest FBeta value of 0.546875s. NCBITaxon:9606 -http://example.org/e167f812-f5c0-4130-acde-87a6f6279d72 owl:NamedIndividual Vip_4 CLM:1001213 A Vip_4 in the Human Brain has the gene markers WNT5A, ABI3BP, VCAN with a NS-Forest FBeta value of 0.546875s. NCBITaxon:9606 -http://example.org/e3576779-5afa-46ee-8a6c-ca581aaa0c7d owl:NamedIndividual Vip_5 CLM:1001214 A Vip_5 in the Human Brain has the gene markers LINC01630, IQGAP2, THSD4 with a NS-Forest FBeta value of 0.4801324503311257s. NCBITaxon:9606 -http://example.org/7410b553-9cc8-4705-a276-9a391724dac9 owl:NamedIndividual Vip_5 CLM:1001214 A Vip_5 in the Human Brain has the gene markers LINC01630, IQGAP2, THSD4 with a NS-Forest FBeta value of 0.4801324503311257s. NCBITaxon:9606 -http://example.org/58ad3c67-8972-4838-b8d8-d0950413aad2 owl:NamedIndividual Vip_6 CLM:1001215 A Vip_6 in the Human Brain has the gene markers SMOC1, IQGAP2, PARD3B with a NS-Forest FBeta value of 0.5082179930795848s. NCBITaxon:9606 -http://example.org/82711ec2-43f3-4894-a00c-b8d17826bc81 owl:NamedIndividual Vip_6 CLM:1001215 A Vip_6 in the Human Brain has the gene markers SMOC1, IQGAP2, PARD3B with a NS-Forest FBeta value of 0.5082179930795848s. NCBITaxon:9606 -http://example.org/490dcda1-91be-4712-9a81-de841942bf19 owl:NamedIndividual Vip_7 CLM:1001216 A Vip_7 in the Human Brain has the gene markers CCN2, PCDH18, SEMA3C, HPSE2 with a NS-Forest FBeta value of 0.40059347181008903s. NCBITaxon:9606 -http://example.org/43dcd820-64cf-4b89-a3ca-3009f53b739f owl:NamedIndividual Vip_7 CLM:1001216 A Vip_7 in the Human Brain has the gene markers CCN2, PCDH18, SEMA3C, HPSE2 with a NS-Forest FBeta value of 0.40059347181008903s. NCBITaxon:9606 -http://example.org/9822c86f-c358-4179-8a2a-2419ce389e96 owl:NamedIndividual Vip_8 CLM:1001217 A Vip_8 in the Human Brain has the gene markers VWDE, WSCD1, DACH2 with a NS-Forest FBeta value of 0.3183962264150943s. NCBITaxon:9606 -http://example.org/aebf6e1e-7478-4304-b9dc-672beab7b4d5 owl:NamedIndividual Vip_8 CLM:1001217 A Vip_8 in the Human Brain has the gene markers VWDE, WSCD1, DACH2 with a NS-Forest FBeta value of 0.3183962264150943s. NCBITaxon:9606 -http://example.org/e8dbf5b7-e87a-43b9-aa4b-61806785d747 owl:NamedIndividual Vip_9 CLM:1001218 A Vip_9 in the Human Brain has the gene markers SLC7A11, TNS3, PPP1R1C, COBLL1 with a NS-Forest FBeta value of 0.48302107728337235s. NCBITaxon:9606 -http://example.org/f64a9d59-af5e-4bb3-a4e7-53a5b535d7b5 owl:NamedIndividual Vip_9 CLM:1001218 A Vip_9 in the Human Brain has the gene markers SLC7A11, TNS3, PPP1R1C, COBLL1 with a NS-Forest FBeta value of 0.48302107728337235s. NCBITaxon:9606 -http://example.org/957c8c4b-1ace-4f72-b33a-3885a05d53fc owl:NamedIndividual Vip_10 CLM:1001219 A Vip_10 in the Human Brain has the gene markers ABI3BP, KCNG2, PARD3B with a NS-Forest FBeta value of 0.5405405405405405s. NCBITaxon:9606 -http://example.org/9129d96f-8103-4bd0-b2f4-42d2548f59cb owl:NamedIndividual Vip_10 CLM:1001219 A Vip_10 in the Human Brain has the gene markers ABI3BP, KCNG2, PARD3B with a NS-Forest FBeta value of 0.5405405405405405s. NCBITaxon:9606 -http://example.org/d90e0687-39aa-43fc-846b-69b9e31e5748 owl:NamedIndividual Vip_11 CLM:1001220 A Vip_11 in the Human Brain has the gene markers ABI3BP, MCTP2, SLC22A3, PROS1 with a NS-Forest FBeta value of 0.43523676880222845s. NCBITaxon:9606 -http://example.org/38963ffe-cd49-4dd3-8582-0b5987143bbe owl:NamedIndividual Vip_11 CLM:1001220 A Vip_11 in the Human Brain has the gene markers ABI3BP, MCTP2, SLC22A3, PROS1 with a NS-Forest FBeta value of 0.43523676880222845s. NCBITaxon:9606 -http://example.org/3e59fe52-b1c7-4d75-ac14-5021af1b146f owl:NamedIndividual Vip_12 CLM:1001221 A Vip_12 in the Human Brain has the gene markers SLC7A11, HCRTR2, EPS8 with a NS-Forest FBeta value of 0.5889057750759878s. NCBITaxon:9606 -http://example.org/b6cf8b92-bc13-4c50-8cd2-0842f3f9e470 owl:NamedIndividual Vip_12 CLM:1001221 A Vip_12 in the Human Brain has the gene markers SLC7A11, HCRTR2, EPS8 with a NS-Forest FBeta value of 0.5889057750759878s. NCBITaxon:9606 -http://example.org/6184c386-16c1-4ac0-9529-8ea52297106a owl:NamedIndividual Vip_13 CLM:1001222 A Vip_13 in the Human Brain has the gene markers ST18, PTGDS, VIP with a NS-Forest FBeta value of 0.42776639344262285s. NCBITaxon:9606 -http://example.org/76fc7b4b-3f50-45ef-b810-fd6d7e1801ab owl:NamedIndividual Vip_13 CLM:1001222 A Vip_13 in the Human Brain has the gene markers ST18, PTGDS, VIP with a NS-Forest FBeta value of 0.42776639344262285s. NCBITaxon:9606 -http://example.org/618a6b0f-362f-47a6-8589-c5ccec331ae6 owl:NamedIndividual Vip_14 CLM:1001223 A Vip_14 in the Human Brain has the gene markers ST18, KCNH8, CA10, VIP with a NS-Forest FBeta value of 0.5968468468468467s. NCBITaxon:9606 -http://example.org/bf7c5bd9-847a-4d01-b0d5-7c184e16cb00 owl:NamedIndividual Vip_14 CLM:1001223 A Vip_14 in the Human Brain has the gene markers ST18, KCNH8, CA10, VIP with a NS-Forest FBeta value of 0.5968468468468467s. NCBITaxon:9606 -http://example.org/e0033d29-f8a7-4a49-90b5-06ba09e3dbf0 owl:NamedIndividual Vip_15 CLM:1001224 A Vip_15 in the Human Brain has the gene markers SVIL, VIP with a NS-Forest FBeta value of 0.6172360248447205s. NCBITaxon:9606 -http://example.org/7cc86d0d-56c1-4d77-8b57-34792b97cc0f owl:NamedIndividual Vip_15 CLM:1001224 A Vip_15 in the Human Brain has the gene markers SVIL, VIP with a NS-Forest FBeta value of 0.6172360248447205s. NCBITaxon:9606 -http://example.org/6825386c-334c-41dc-9a46-0c61efadf209 owl:NamedIndividual Vip_16 CLM:1001225 A Vip_16 in the Human Brain has the gene markers NDST4, SEMA3C, HTR2C, VIP with a NS-Forest FBeta value of 0.38s. NCBITaxon:9606 -http://example.org/9839b08b-da73-438e-a437-1a778538fb02 owl:NamedIndividual Vip_16 CLM:1001225 A Vip_16 in the Human Brain has the gene markers NDST4, SEMA3C, HTR2C, VIP with a NS-Forest FBeta value of 0.38s. NCBITaxon:9606 -http://example.org/59e43f0e-f7bc-49da-8686-a61daf6acd1c owl:NamedIndividual Vip_17 CLM:1001226 A Vip_17 in the Human Brain has the gene markers PENK, PARD3B with a NS-Forest FBeta value of 0.6040502793296089s. NCBITaxon:9606 -http://example.org/d77db51a-bfec-4f98-a4bb-d81b17e2f8d3 owl:NamedIndividual Vip_17 CLM:1001226 A Vip_17 in the Human Brain has the gene markers PENK, PARD3B with a NS-Forest FBeta value of 0.6040502793296089s. NCBITaxon:9606 -http://example.org/bacb2560-b0aa-4a07-8285-28b82a874184 owl:NamedIndividual Vip_18 CLM:1001227 A Vip_18 in the Human Brain has the gene markers NOX4, RXRG, NDST4 with a NS-Forest FBeta value of 0.38953488372093026s. NCBITaxon:9606 -http://example.org/2af78fc8-424e-48e3-b379-747c17727c58 owl:NamedIndividual Vip_18 CLM:1001227 A Vip_18 in the Human Brain has the gene markers NOX4, RXRG, NDST4 with a NS-Forest FBeta value of 0.38953488372093026s. NCBITaxon:9606 -http://example.org/2e913166-e966-474c-8e7e-ff08730f7766 owl:NamedIndividual Vip_19 CLM:1001228 A Vip_19 in the Human Brain has the gene markers CBLN1, HTR2C, VIP with a NS-Forest FBeta value of 0.5353075170842825s. NCBITaxon:9606 -http://example.org/ab0cd6a7-8ecc-4928-b48f-89f83409ba23 owl:NamedIndividual Vip_19 CLM:1001228 A Vip_19 in the Human Brain has the gene markers CBLN1, HTR2C, VIP with a NS-Forest FBeta value of 0.5353075170842825s. NCBITaxon:9606 -http://example.org/9c470d27-06e5-42e3-997e-b33772d830f5 owl:NamedIndividual Vip_20 CLM:1001229 A Vip_20 in the Human Brain has the gene markers CBLN1, VIPR2, PPP1R1C, VIP with a NS-Forest FBeta value of 0.3658536585365853s. NCBITaxon:9606 -http://example.org/a7666632-cfdc-404c-b4d4-f9f5550585a1 owl:NamedIndividual Vip_20 CLM:1001229 A Vip_20 in the Human Brain has the gene markers CBLN1, VIPR2, PPP1R1C, VIP with a NS-Forest FBeta value of 0.3658536585365853s. NCBITaxon:9606 -http://example.org/a5b0571b-ac66-4229-b03f-fa97712b799c owl:NamedIndividual Vip_21 CLM:1001230 A Vip_21 in the Human Brain has the gene markers ALDH1A2, ROR2 with a NS-Forest FBeta value of 0.6180811808118081s. NCBITaxon:9606 -http://example.org/cb8e8566-f884-46a1-8a2d-178fbb0f4b75 owl:NamedIndividual Vip_21 CLM:1001230 A Vip_21 in the Human Brain has the gene markers ALDH1A2, ROR2 with a NS-Forest FBeta value of 0.6180811808118081s. NCBITaxon:9606 -http://example.org/1c2fd8f9-8f06-4d48-a697-a3ea1fa66df3 owl:NamedIndividual Vip_22 CLM:1001231 A Vip_22 in the Human Brain has the gene markers ABI3BP, SLC7A11, EDNRA with a NS-Forest FBeta value of 0.5279126213592233s. NCBITaxon:9606 -http://example.org/5c3b06bb-3d9f-420b-853b-209e6199a201 owl:NamedIndividual Vip_22 CLM:1001231 A Vip_22 in the Human Brain has the gene markers ABI3BP, SLC7A11, EDNRA with a NS-Forest FBeta value of 0.5279126213592233s. NCBITaxon:9606 -http://example.org/0a94b7ef-933e-4d1c-9154-f20eda78dc21 owl:NamedIndividual Vip_23 CLM:1001232 A Vip_23 in the Human Brain has the gene markers KCNH8, EDNRA, KMO with a NS-Forest FBeta value of 0.54251269035533s. NCBITaxon:9606 -http://example.org/ea25033b-4545-4209-bd16-f72f14203dbc owl:NamedIndividual Vip_23 CLM:1001232 A Vip_23 in the Human Brain has the gene markers KCNH8, EDNRA, KMO with a NS-Forest FBeta value of 0.54251269035533s. NCBITaxon:9606 -http://example.org/50ff228f-6878-4784-bdc0-410c69782df3 owl:NamedIndividual Vip_24 CLM:1001233 A Vip_24 in the Human Brain has the gene markers LYPD1, ENHO, CHRNA2 with a NS-Forest FBeta value of 0.36276223776223776s. NCBITaxon:9606 -http://example.org/05c45d7e-c8ea-4b74-8808-6b61ea88c5db owl:NamedIndividual Vip_24 CLM:1001233 A Vip_24 in the Human Brain has the gene markers LYPD1, ENHO, CHRNA2 with a NS-Forest FBeta value of 0.36276223776223776s. NCBITaxon:9606 -http://example.org/a8f2176b-bc3e-45cd-81a9-66b08938cc09 owl:NamedIndividual Vip_25 CLM:1001234 A Vip_25 in the Human Brain has the gene markers NOX4, IQGAP2, CBLN4 with a NS-Forest FBeta value of 0.5275229357798166s. NCBITaxon:9606 -http://example.org/59e23b4d-829a-4cc0-84bb-036e8731e60c owl:NamedIndividual Vip_25 CLM:1001234 A Vip_25 in the Human Brain has the gene markers NOX4, IQGAP2, CBLN4 with a NS-Forest FBeta value of 0.5275229357798166s. NCBITaxon:9606 -http://example.org/c1c0cae1-5730-48ec-8c95-3358bdaa539d owl:NamedIndividual Vip_26 CLM:1001235 A Vip_26 in the Human Brain has the gene markers SEMA3C, LINC01630, HPSE2, TAC3 with a NS-Forest FBeta value of 0.5947955390334573s. NCBITaxon:9606 -http://example.org/d56bd760-3fdb-4814-8237-568d8dd38c8d owl:NamedIndividual Vip_26 CLM:1001235 A Vip_26 in the Human Brain has the gene markers SEMA3C, LINC01630, HPSE2, TAC3 with a NS-Forest FBeta value of 0.5947955390334573s. NCBITaxon:9606 -http://example.org/74f97cdc-646e-4706-89fd-5e03b92a2aaf owl:NamedIndividual Vip_27 CLM:1001236 A Vip_27 in the Human Brain has the gene markers DACH2, CHRNA7, MIR4500HG, VIP with a NS-Forest FBeta value of 0.5466778805719091s. NCBITaxon:9606 -http://example.org/2a3da283-df5b-47b3-b8ab-59c3f7bc126c owl:NamedIndividual Vip_27 CLM:1001236 A Vip_27 in the Human Brain has the gene markers DACH2, CHRNA7, MIR4500HG, VIP with a NS-Forest FBeta value of 0.5466778805719091s. NCBITaxon:9606 -http://example.org/6dafb4f0-cb9b-40ee-8107-bfd1db796c10 owl:NamedIndividual Vip_28 CLM:1001237 A Vip_28 in the Human Brain has the gene markers HTR2C, DCN with a NS-Forest FBeta value of 0.3763440860215054s. NCBITaxon:9606 -http://example.org/4804916c-8dba-41c3-a92f-b810beb4364f owl:NamedIndividual Vip_28 CLM:1001237 A Vip_28 in the Human Brain has the gene markers HTR2C, DCN with a NS-Forest FBeta value of 0.3763440860215054s. NCBITaxon:9606 -http://example.org/9523c901-d5b5-4e51-9079-073bda62f64c owl:NamedIndividual Vip_29 CLM:1001238 A Vip_29 in the Human Brain has the gene markers IQGAP2, KCNJ2, TAC1, MYO5B, VIP with a NS-Forest FBeta value of 0.49180327868852464s. NCBITaxon:9606 -http://example.org/36e7d3e2-c82c-4b3e-ab54-46e3b479ec43 owl:NamedIndividual Vip_29 CLM:1001238 A Vip_29 in the Human Brain has the gene markers IQGAP2, KCNJ2, TAC1, MYO5B, VIP with a NS-Forest FBeta value of 0.49180327868852464s. NCBITaxon:9606 From 8ef22c9700d9be244721af639ecb17bdbbbac2a7 Mon Sep 17 00:00:00 2001 From: ugur Date: Thu, 12 Dec 2024 14:56:58 +0000 Subject: [PATCH 2/3] Update release artefacts --- clm-base.json | 4 +- clm-base.obo | 4 +- clm-base.owl | 4 +- clm-cl.json | 4 +- clm-cl.obo | 4 +- clm-cl.owl | 4 +- clm-full.json | 4 +- clm-full.obo | 4 +- clm-full.owl | 4 +- clm-kg.json | 3337 +++--- clm-kg.obo | 926 +- clm-kg.owl | 3493 +++--- clm-simple.json | 4 +- clm-simple.obo | 4 +- clm-simple.owl | 4 +- clm.json | 4 +- clm.obo | 4 +- clm.owl | 4 +- src/ontology/imports/merged_import.owl | 14597 +++++++++++++++++++++-- src/patterns/definitions.owl | 4 +- 20 files changed, 17194 insertions(+), 5223 deletions(-) diff --git a/clm-base.json b/clm-base.json index 6ef04e9..2c273c0 100644 --- a/clm-base.json +++ b/clm-base.json @@ -16,9 +16,9 @@ "val" : "Cell Markers Ontology" }, { "pred" : "http://www.w3.org/2002/07/owl#versionInfo", - "val" : "2024-12-02" + "val" : "2024-12-12" } ], - "version" : "http://purl.obolibrary.org/obo/clm/releases/2024-12-02/clm-base.json" + "version" : "http://purl.obolibrary.org/obo/clm/releases/2024-12-12/clm-base.json" }, "nodes" : [ { "id" : "http://identifiers.org/ensembl/ENSG00000006128", diff --git a/clm-base.obo b/clm-base.obo index f908c25..a9d28f6 100644 --- a/clm-base.obo +++ b/clm-base.obo @@ -1,5 +1,5 @@ format-version: 1.2 -data-version: clm/releases/2024-12-02/clm-base.owl +data-version: clm/releases/2024-12-12/clm-base.owl idspace: dce http://purl.org/dc/elements/1.1/ idspace: dcterms http://purl.org/dc/terms/ idspace: oboInOwl http://www.geneontology.org/formats/oboInOwl# @@ -8,7 +8,7 @@ property_value: dce:type IAO:8000001 property_value: dcterms:description "None" xsd:string property_value: dcterms:license https://creativecommons.org/licenses/unspecified property_value: dcterms:title "Cell Markers Ontology" xsd:string -property_value: owl:versionInfo "2024-12-02" xsd:string +property_value: owl:versionInfo "2024-12-12" xsd:string [Term] id: CL:0000583 diff --git a/clm-base.owl b/clm-base.owl index b477da3..a887541 100644 --- a/clm-base.owl +++ b/clm-base.owl @@ -11,12 +11,12 @@ xmlns:dcterms="http://purl.org/dc/terms/" xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#"> - + None Cell Markers Ontology - 2024-12-02 + 2024-12-12 diff --git a/clm-cl.json b/clm-cl.json index 29e0a8d..b866664 100644 --- a/clm-cl.json +++ b/clm-cl.json @@ -879,10 +879,10 @@ }, { "pred": "http://www.w3.org/2002/07/owl#versionInfo", - "val": "2024-12-02" + "val": "2024-12-12" } ], - "version": "http://purl.obolibrary.org/obo/clm/releases/2024-12-02/clm-cl.json" + "version": "http://purl.obolibrary.org/obo/clm/releases/2024-12-12/clm-cl.json" }, "nodes": [ { diff --git a/clm-cl.obo b/clm-cl.obo index c81a2f1..0ead9b3 100644 --- a/clm-cl.obo +++ b/clm-cl.obo @@ -1,5 +1,5 @@ format-version: 1.2 -data-version: clm/releases/2024-12-02/clm-cl.owl +data-version: clm/releases/2024-12-12/clm-cl.owl idspace: dce http://purl.org/dc/elements/1.1/ idspace: dcterms http://purl.org/dc/terms/ idspace: oboInOwl http://www.geneontology.org/formats/oboInOwl# @@ -8,7 +8,7 @@ property_value: dce:type IAO:8000001 property_value: dcterms:description "None" xsd:string property_value: dcterms:license https://creativecommons.org/licenses/unspecified property_value: dcterms:title "Cell Markers Ontology" xsd:string -property_value: owl:versionInfo "2024-12-02" xsd:string +property_value: owl:versionInfo "2024-12-12" xsd:string [Term] id: CL:0000583 diff --git a/clm-cl.owl b/clm-cl.owl index 5f0a928..0366f3c 100644 --- a/clm-cl.owl +++ b/clm-cl.owl @@ -11,12 +11,12 @@ xmlns:dcterms="http://purl.org/dc/terms/" xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#"> - + None Cell Markers Ontology - 2024-12-02 + 2024-12-12 diff --git a/clm-full.json b/clm-full.json index 28b66f8..f7ad893 100644 --- a/clm-full.json +++ b/clm-full.json @@ -13,9 +13,9 @@ "val" : "Cell Markers Ontology" }, { "pred" : "http://www.w3.org/2002/07/owl#versionInfo", - "val" : "2024-12-02" + "val" : "2024-12-12" } ], - "version" : "http://purl.obolibrary.org/obo/clm/releases/2024-12-02/clm-full.json" + "version" : "http://purl.obolibrary.org/obo/clm/releases/2024-12-12/clm-full.json" }, "nodes" : [ { "id" : "http://identifiers.org/ensembl/ENSG00000006128", diff --git a/clm-full.obo b/clm-full.obo index cd8b9ff..404dde0 100644 --- a/clm-full.obo +++ b/clm-full.obo @@ -1,5 +1,5 @@ format-version: 1.2 -data-version: clm/releases/2024-12-02/clm-full.owl +data-version: clm/releases/2024-12-12/clm-full.owl idspace: dce http://purl.org/dc/elements/1.1/ idspace: dcterms http://purl.org/dc/terms/ idspace: oboInOwl http://www.geneontology.org/formats/oboInOwl# @@ -7,7 +7,7 @@ ontology: clm/clm-full property_value: dcterms:description "None" xsd:string property_value: dcterms:license https://creativecommons.org/licenses/unspecified property_value: dcterms:title "Cell Markers Ontology" xsd:string -property_value: owl:versionInfo "2024-12-02" xsd:string +property_value: owl:versionInfo "2024-12-12" xsd:string [Term] id: CHEBI:24431 diff --git a/clm-full.owl b/clm-full.owl index 65cf578..f9b9151 100644 --- a/clm-full.owl +++ b/clm-full.owl @@ -11,11 +11,11 @@ xmlns:dcterms="http://purl.org/dc/terms/" xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#"> - + None Cell Markers Ontology - 2024-12-02 + 2024-12-12 diff --git a/clm-kg.json b/clm-kg.json index cb2658f..0c66d2e 100644 --- a/clm-kg.json +++ b/clm-kg.json @@ -116774,10 +116774,10 @@ }, { "pred": "http://www.w3.org/2002/07/owl#versionInfo", - "val": "2024-12-02" + "val": "2024-12-12" } ], - "version": "http://purl.obolibrary.org/obo/clm/releases/2024-12-02/clm-kg.json" + "version": "http://purl.obolibrary.org/obo/clm/releases/2024-12-12/clm-kg.json" }, "nodes": [ { @@ -784108,12 +784108,12 @@ "type": "CLASS" }, { - "id": "http://example.org/0027402d-57e0-41b8-984a-20af1202a461", + "id": "http://example.org/00c3e6b7-1fe8-57ee-b890-21c050a3d411", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000069" + "val": "http://purl.obolibrary.org/obo/CLM_1001227" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -784121,22 +784121,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "L5/6 NP" + "val": "Vip_18" } ], "comments": [ - "A L5/6 NP in the Human Brain has the gene markers NPSR1-AS1, TLL1 with a NS-Forest FBeta value of 0.899288218s." + "A Vip_18 in the Human Brain has the gene markers NOX4, RXRG, NDST4 with a NS-Forest FBeta value of 0.38953488372093026s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/016fd372-edea-4ab2-b3cf-4a0ed6d41aaa", + "id": "http://example.org/013bca8c-94bc-5638-8fba-bbc94411b653", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001179" + "val": "http://purl.obolibrary.org/obo/CLM_1001101" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -784144,22 +784144,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst_9" + "val": "L4 IT_2" } ], "comments": [ - "A Sst_9 in the Human Brain has the gene markers MYO10, ARHGAP6, FREM1 with a NS-Forest FBeta value of 0.3506097560975609s." + "A L4 IT_2 in the Human Brain has the gene markers C6orf141, ST8SIA4 with a NS-Forest FBeta value of 0.7738095238095238s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/01ab16fe-0dc8-473e-901d-dced0a36c9dd", + "id": "http://example.org/017d6c72-e7fd-5da0-b339-cf41c9dec014", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001146" + "val": "http://purl.obolibrary.org/obo/CLM_1001088" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -784167,22 +784167,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Oligo_2" + "val": "Astro_3" } ], "comments": [ - "A Oligo_2 in the Human Brain has the gene markers MBOAT1, PLP1 with a NS-Forest FBeta value of 0.8189655172413793s." + "A Astro_3 in the Human Brain has the gene markers HEPN1, F3, AGT, GJA1, AQP4 with a NS-Forest FBeta value of 0.5711722488038278s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/0274bba0-db99-469c-9052-8c5576edbf75", + "id": "http://example.org/0245cc6b-0034-5acf-bf46-ed8dbe21730c", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001183" + "val": "http://purl.obolibrary.org/obo/CLM_1001125" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -784190,22 +784190,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst_13" + "val": "L6 IT Car3_1" } ], "comments": [ - "A Sst_13 in the Human Brain has the gene markers FBN2, TRPC6, EPB41L4A with a NS-Forest FBeta value of 0.5461876832844575s." + "A L6 IT Car3_1 in the Human Brain has the gene markers LINC00348 with a NS-Forest FBeta value of 0.665s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/027b8a51-3e70-4843-a8b0-90eecf478755", + "id": "http://example.org/02ba3608-520e-58c3-8296-7a30fb44b792", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000069" + "val": "http://purl.obolibrary.org/obo/CLM_1000065" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -784213,22 +784213,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "L5/6 NP" + "val": "L2/3 IT" } ], "comments": [ - "A L5/6 NP in the Human Brain has the gene markers NPSR1-AS1, TLL1 with a NS-Forest FBeta value of 0.899288218s." + "A L2/3 IT in the Human Brain has the gene markers ONECUT2, COL5A2 with a NS-Forest FBeta value of 0.670149932s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/05a161b8-3037-4fc4-a456-435ca9ade8f1", + "id": "http://example.org/031bb4ce-7a74-5c7c-be97-388b3d1545fe", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000053" + "val": "http://purl.obolibrary.org/obo/CLM_1001225" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -784236,22 +784236,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "SMG mucous" + "val": "Vip_16" } ], "comments": [ - "A SMG mucous in the Human Lung has the gene markers BPIFB2 with a NS-Forest FBeta value of 0.93s." + "A Vip_16 in the Human Brain has the gene markers NDST4, SEMA3C, HTR2C, VIP with a NS-Forest FBeta value of 0.38s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/05c45d7e-c8ea-4b74-8808-6b61ea88c5db", + "id": "http://example.org/0353b724-00ce-5af3-81d0-975e4b9125c0", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001233" + "val": "http://purl.obolibrary.org/obo/CLM_1000067" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -784259,22 +784259,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Vip_24" + "val": "L5 ET" } ], "comments": [ - "A Vip_24 in the Human Brain has the gene markers LYPD1, ENHO, CHRNA2 with a NS-Forest FBeta value of 0.36276223776223776s." + "A L5 ET in the Human Brain has the gene markers CHST8, POU3F1 with a NS-Forest FBeta value of 0.815891473s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/068a3001-0916-43f7-ba1c-cf9677184f09", + "id": "http://example.org/047da42f-ec9e-51d3-a950-a77de0946fd3", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001132" + "val": "http://purl.obolibrary.org/obo/CLM_1001179" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -784282,22 +784282,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "L6b_4" + "val": "Sst_9" } ], "comments": [ - "A L6b_4 in the Human Brain has the gene markers NR4A2, ATP8B4 with a NS-Forest FBeta value of 0.5812101910828025s." + "A Sst_9 in the Human Brain has the gene markers MYO10, ARHGAP6, FREM1 with a NS-Forest FBeta value of 0.3506097560975609s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/07aaef07-92bb-457a-8478-414e045f3133", + "id": "http://example.org/04ab6149-7282-579f-a082-698ef7abb485", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001159" + "val": "http://purl.obolibrary.org/obo/CLM_1001155" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -784305,22 +784305,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Pvalb_7" + "val": "Pvalb_3" } ], "comments": [ - "A Pvalb_7 in the Human Brain has the gene markers SULF1, ZNF385D-AS2 with a NS-Forest FBeta value of 0.5650087260034904s." + "A Pvalb_3 in the Human Brain has the gene markers TAFA4, SYT10, ANOS1, HTR4 with a NS-Forest FBeta value of 0.635593220338983s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/07c20a1f-7c01-4d7f-b176-6d792a2d4129", + "id": "http://example.org/06b2002f-99f5-5159-91ab-035f401426fe", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001208" + "val": "http://purl.obolibrary.org/obo/CLM_1000078" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -784328,22 +784328,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "VLMC_1" + "val": "Oligo" } ], "comments": [ - "A VLMC_1 in the Human Brain has the gene markers TAGLN, ACTA2 with a NS-Forest FBeta value of 0.8559498956158662s." + "A Oligo in the Human Brain has the gene markers ST18, PLP1 with a NS-Forest FBeta value of 0.97185637s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/088cb0c8-a385-4a56-84b1-51ba1f77f9fe", + "id": "http://example.org/06f9cbf6-8be3-5fd0-aeb5-884e72565a15", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001093" + "val": "http://purl.obolibrary.org/obo/CLM_1001162" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -784351,22 +784351,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Endo_2" + "val": "Sncg_1" } ], "comments": [ - "A Endo_2 in the Human Brain has the gene markers HERC2P3, PRKCH with a NS-Forest FBeta value of 0.8270877944325483s." + "A Sncg_1 in the Human Brain has the gene markers UNC5B, TAFA4, THSD7B with a NS-Forest FBeta value of 0.5883947939262474s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/09610961-0253-4433-bd68-71662bb7f790", + "id": "http://example.org/08bc9830-9e0a-5dc3-a051-d473ad150724", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000057" + "val": "http://purl.obolibrary.org/obo/CLM_1001137" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -784374,22 +784374,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Smooth muscle FAM83D+" + "val": "Lamp5_2" } ], "comments": [ - "A Smooth muscle FAM83D+ in the Human Lung has the gene markers ACTG2 with a NS-Forest FBeta value of 0.77s." + "A Lamp5_2 in the Human Brain has the gene markers PBX3, KIT with a NS-Forest FBeta value of 0.7316272965879266s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/0a314e5d-3a14-4f15-8b65-257364ebd00d", + "id": "http://example.org/094c4cd8-3002-5e4f-937d-c84d8c9c1f6d", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001122" + "val": "http://purl.obolibrary.org/obo/CLM_1000085" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -784397,22 +784397,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "L6 CT_1" + "val": "Vip" } ], "comments": [ - "A L6 CT_1 in the Human Brain has the gene markers LGR6, OR1Q1, SULF1 with a NS-Forest FBeta value of 0.665374677002584s." + "A Vip in the Human Brain has the gene markers VIP with a NS-Forest FBeta value of 0.855531344s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/0a59c033-64c5-48e5-8bf6-51149ef29eb6", + "id": "http://example.org/09e1dbd4-a184-50b4-aaf9-6d6f833653ff", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001178" + "val": "http://purl.obolibrary.org/obo/CLM_1001098" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -784420,22 +784420,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst_8" + "val": "L2/3 IT_5" } ], "comments": [ - "A Sst_8 in the Human Brain has the gene markers STK32A, SYT9, RELN with a NS-Forest FBeta value of 0.5061619718309859s." + "A L2/3 IT_5 in the Human Brain has the gene markers GPX3, ADCYAP1, RMST with a NS-Forest FBeta value of 0.5061141304347826s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/0a94b7ef-933e-4d1c-9154-f20eda78dc21", + "id": "http://example.org/0a295b69-49ff-5b42-bcc8-2f214b45dff3", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001232" + "val": "http://purl.obolibrary.org/obo/CLM_1001150" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -784443,22 +784443,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Vip_23" + "val": "Pax6_2" } ], "comments": [ - "A Vip_23 in the Human Brain has the gene markers KCNH8, EDNRA, KMO with a NS-Forest FBeta value of 0.54251269035533s." + "A Pax6_2 in the Human Brain has the gene markers TGFBR2, BCHE, RELN with a NS-Forest FBeta value of 0.7676056338028169s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/0c68ab7f-c9dc-4512-ae06-40584a069e76", + "id": "http://example.org/0ae7c362-4542-5693-9231-53884050359d", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000038" + "val": "http://purl.obolibrary.org/obo/CLM_1000069" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -784466,22 +784466,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Migratory DCs" + "val": "L5/6 NP" } ], "comments": [ - "A Migratory DCs in the Human Lung has the gene markers CCL22 with a NS-Forest FBeta value of 0.50s." + "A L5/6 NP in the Human Brain has the gene markers NPSR1-AS1, TLL1 with a NS-Forest FBeta value of 0.899288218s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/0dceb01b-4f33-40e4-b27b-c51eaeeed4d9", + "id": "http://example.org/0b4ea8e2-87de-526c-8904-5f9546b79e24", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001106" + "val": "http://purl.obolibrary.org/obo/CLM_1001126" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -784489,22 +784489,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "L5 ET_1" + "val": "L6 IT Car3_2" } ], "comments": [ - "A L5 ET_1 in the Human Brain has the gene markers LINC00922, POU3F1 with a NS-Forest FBeta value of 0.728891820580475s." + "A L6 IT Car3_2 in the Human Brain has the gene markers SMYD1, ITGB8 with a NS-Forest FBeta value of 0.6594036697247707s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/0dfccb77-623b-4af4-92a5-d02b9941432b", + "id": "http://example.org/0c7342b5-0db3-5118-a85d-17b6ae1932ff", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001156" + "val": "http://purl.obolibrary.org/obo/CLM_1001188" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -784512,22 +784512,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Pvalb_4" + "val": "Sst_18" } ], "comments": [ - "A Pvalb_4 in the Human Brain has the gene markers MT-ND4L, RGS5_ENSG00000143248, WIF1, TAC1 with a NS-Forest FBeta value of 0.4390934844192635s." + "A Sst_18 in the Human Brain has the gene markers ENOX2, PNOC, SST, RELN with a NS-Forest FBeta value of 0.34307875894988066s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/11dd76d5-f155-4853-ad98-0a6ff36dead6", + "id": "http://example.org/0e09fa65-9846-5a95-b9d5-6e8052ee4df1", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000059" + "val": "http://purl.obolibrary.org/obo/CLM_1001120" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -784535,22 +784535,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Suprabasal" + "val": "L5/6 NP_5" } ], "comments": [ - "A Suprabasal in the Human Lung has the gene markers TNC, KRT15, SERPINB4 with a NS-Forest FBeta value of 0.62s." + "A L5/6 NP_5 in the Human Brain has the gene markers COL9A1, NPSR1, TLL1 with a NS-Forest FBeta value of 0.5373831775700935s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/1283e885-59de-4dde-af7e-7ac63020b98a", + "id": "http://example.org/0eb61f5e-9fd4-5033-bea0-0ff0105f7462", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001107" + "val": "http://purl.obolibrary.org/obo/CLM_1001123" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -784558,22 +784558,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "L5 ET_2" + "val": "L6 CT_2" } ], "comments": [ - "A L5 ET_2 in the Human Brain has the gene markers ATP6V1C2, LRP2, ST8SIA2 with a NS-Forest FBeta value of 0.7593749999999999s." + "A L6 CT_2 in the Human Brain has the gene markers SYT6, ITGA11, SEMA5B with a NS-Forest FBeta value of 0.791868932038835s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/13122086-061b-4b65-9825-195dec515b7f", + "id": "http://example.org/0fa5c018-22a3-5525-900a-3451e5108cc2", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000026" + "val": "http://purl.obolibrary.org/obo/CLM_1001238" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -784581,22 +784581,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Goblet (bronchial)" + "val": "Vip_29" } ], "comments": [ - "A Goblet (bronchial) in the Human Lung has the gene markers PLCG2, ANKRD36C with a NS-Forest FBeta value of 0.55s." + "A Vip_29 in the Human Brain has the gene markers IQGAP2, KCNJ2, TAC1, MYO5B, VIP with a NS-Forest FBeta value of 0.49180327868852464s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/14aad0d2-f017-4203-af34-8ee5485d91af", + "id": "http://example.org/1038574c-cdb3-55f3-8a2e-9667a0f276f8", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001206" + "val": "http://purl.obolibrary.org/obo/CLM_1001184" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -784604,22 +784604,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst_36" + "val": "Sst_14" } ], "comments": [ - "A Sst_36 in the Human Brain has the gene markers TRDN, ITGA1, PARD3B, PLCH1 with a NS-Forest FBeta value of 0.6381381381381382s." + "A Sst_14 in the Human Brain has the gene markers SLC9A2, ROR1, EYA4 with a NS-Forest FBeta value of 0.46314741035856577s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/14f8f999-2363-45c7-b8f6-2e5d657da249", + "id": "http://example.org/1060800b-a8cb-5821-b994-36336733cae7", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001168" + "val": "http://purl.obolibrary.org/obo/CLM_1001167" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -784627,22 +784627,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sncg_7" + "val": "Sncg_6" } ], "comments": [ - "A Sncg_7 in the Human Brain has the gene markers HTR3A, SYT9, MCTP2 with a NS-Forest FBeta value of 0.7097791798107256s." + "A Sncg_6 in the Human Brain has the gene markers THSD7B, ADAMTSL1, RELN with a NS-Forest FBeta value of 0.5738434163701067s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/15ea1deb-bf62-44bb-9c52-7f31f264787a", + "id": "http://example.org/11814b28-93a8-5db9-9002-ca420c5fdfdf", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000064" + "val": "http://purl.obolibrary.org/obo/CLM_1001111" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -784650,22 +784650,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Endo" + "val": "L5 IT_2" } ], "comments": [ - "A Endo in the Human Brain has the gene markers FLT1, ABCG2 with a NS-Forest FBeta value of 0.923892465s." + "A L5 IT_2 in the Human Brain has the gene markers NPY2R, PCED1B, TLL1, RORB with a NS-Forest FBeta value of 0.5685240963855422s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/15f75f2b-e5cc-4034-8d9a-3f9da063e966", + "id": "http://example.org/118e4f6e-7378-5fc7-8703-43ff8b84c11c", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001199" + "val": "http://purl.obolibrary.org/obo/CLM_1001114" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -784673,22 +784673,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst_29" + "val": "L5 IT_5" } ], "comments": [ - "A Sst_29 in the Human Brain has the gene markers ENPP1, QRFPR, PIEZO2 with a NS-Forest FBeta value of 0.41353383458646614s." + "A L5 IT_5 in the Human Brain has the gene markers NPNT, CA10, RORB, KCNK2 with a NS-Forest FBeta value of 0.5813953488372092s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/162cb0d5-95b8-4cc8-9180-d904256fc2db", + "id": "http://example.org/131eb56d-8e78-5931-a6d7-022aac5d8b6a", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001133" + "val": "http://purl.obolibrary.org/obo/CLM_1001203" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -784696,22 +784696,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "L6b_5" + "val": "Sst_33" } ], "comments": [ - "A L6b_5 in the Human Brain has the gene markers NXPH4, NR4A2, SEMA3E with a NS-Forest FBeta value of 0.5693519079345852s." + "A Sst_33 in the Human Brain has the gene markers CRYBG3, BMP6, HTR2C with a NS-Forest FBeta value of 0.39086687306501544s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/18e767cd-f4b3-4ccd-a75b-b1e75caf5148", + "id": "http://example.org/143b6349-3e1b-565a-9da2-895a8fb437e0", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001120" + "val": "http://purl.obolibrary.org/obo/CLM_1001190" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -784719,22 +784719,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "L5/6 NP_5" + "val": "Sst_20" } ], "comments": [ - "A L5/6 NP_5 in the Human Brain has the gene markers COL9A1, NPSR1, TLL1 with a NS-Forest FBeta value of 0.5373831775700935s." + "A Sst_20 in the Human Brain has the gene markers QRFPR, HGF, RELN with a NS-Forest FBeta value of 0.4671717171717172s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/1a2a3589-cf80-4e28-8426-5d287518a410", + "id": "http://example.org/14d9754b-1eea-5a7c-97ff-de38f1b4edb5", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001108" + "val": "http://purl.obolibrary.org/obo/CLM_1000077" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -784742,22 +784742,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "L5 ET_3" + "val": "OPC" } ], "comments": [ - "A L5 ET_3 in the Human Brain has the gene markers ONECUT1, TTC6, SEMA3D, FAM189A2 with a NS-Forest FBeta value of 0.8891454965357967s." + "A OPC in the Human Brain has the gene markers FERMT1 with a NS-Forest FBeta value of 0.741071429s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/1a62f1c4-089b-498c-88e0-e5688ed9c312", + "id": "http://example.org/16a30d55-141a-56b0-9919-aa6a1bbc24bb", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001139" + "val": "http://purl.obolibrary.org/obo/CLM_1001158" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -784765,22 +784765,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Lamp5_4" + "val": "Pvalb_6" } ], "comments": [ - "A Lamp5_4 in the Human Brain has the gene markers ROR2, TRPC3, FBXL7, LINC00298 with a NS-Forest FBeta value of 0.40425531914893614s." + "A Pvalb_6 in the Human Brain has the gene markers POSTN, SULF1, CEMIP, RNF144B with a NS-Forest FBeta value of 0.29255319148936176s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/1acbddd4-a8d7-4b0b-9bc9-c5b82f1cba93", + "id": "http://example.org/170fd7f9-f673-5cd0-a423-cc58a1e5f3e1", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001184" + "val": "http://purl.obolibrary.org/obo/CLM_1001216" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -784788,22 +784788,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst_14" + "val": "Vip_7" } ], "comments": [ - "A Sst_14 in the Human Brain has the gene markers SLC9A2, ROR1, EYA4 with a NS-Forest FBeta value of 0.46314741035856577s." + "A Vip_7 in the Human Brain has the gene markers CCN2, PCDH18, SEMA3C, HPSE2 with a NS-Forest FBeta value of 0.40059347181008903s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/1b3acfac-9a86-4c6d-9059-851e8cbb55b7", + "id": "http://example.org/1800bc0a-0e49-5071-9e8e-78f40a1c652b", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001210" + "val": "http://purl.obolibrary.org/obo/CLM_1001102" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -784811,22 +784811,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Vip_1" + "val": "L4 IT_3" } ], "comments": [ - "A Vip_1 in the Human Brain has the gene markers FLT1, LRRC1, SHISA8 with a NS-Forest FBeta value of 0.400763358778626s." + "A L4 IT_3 in the Human Brain has the gene markers TMEM215, KCNH8, RORB with a NS-Forest FBeta value of 0.6151315789473684s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/1b9a88fa-489c-4638-8dcf-d048ffe9b2b9", + "id": "http://example.org/185efaf1-b976-5d3e-824d-d9ef64d31db0", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001155" + "val": "http://purl.obolibrary.org/obo/CLM_1001153" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -784834,17 +784834,132 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Pvalb_3" + "val": "Pvalb_1" } ], "comments": [ - "A Pvalb_3 in the Human Brain has the gene markers TAFA4, SYT10, ANOS1, HTR4 with a NS-Forest FBeta value of 0.635593220338983s." + "A Pvalb_1 in the Human Brain has the gene markers MYBPC1, GPR149, SVIL with a NS-Forest FBeta value of 0.6944444444444444s." + ] + }, + "type": "INDIVIDUAL" + }, + { + "id": "http://example.org/1a215a06-94aa-5ad6-b593-efd1afe46938", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://purl.obolibrary.org/obo/CLM_0010000", + "val": "http://purl.obolibrary.org/obo/CLM_1001195" + }, + { + "pred": "http://purl.obolibrary.org/obo/RO_0002175", + "val": "http://purl.obolibrary.org/obo/NCBITaxon_9606" + }, + { + "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", + "val": "Sst_25" + } + ], + "comments": [ + "A Sst_25 in the Human Brain has the gene markers BLM, CALB1, STK32B with a NS-Forest FBeta value of 0.45689655172413796s." + ] + }, + "type": "INDIVIDUAL" + }, + { + "id": "http://example.org/1a7151c5-448a-54fc-9dac-826a5e957e7a", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://purl.obolibrary.org/obo/CLM_0010000", + "val": "http://purl.obolibrary.org/obo/CLM_1001087" + }, + { + "pred": "http://purl.obolibrary.org/obo/RO_0002175", + "val": "http://purl.obolibrary.org/obo/NCBITaxon_9606" + }, + { + "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", + "val": "Astro_2" + } + ], + "comments": [ + "A Astro_2 in the Human Brain has the gene markers LINC01411, OBI1-AS1 with a NS-Forest FBeta value of 0.5566801619433198s." + ] + }, + "type": "INDIVIDUAL" + }, + { + "id": "http://example.org/1bcefc63-aa07-5cca-8d81-7573fe9782bd", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://purl.obolibrary.org/obo/CLM_0010000", + "val": "http://purl.obolibrary.org/obo/CLM_1001129" + }, + { + "pred": "http://purl.obolibrary.org/obo/RO_0002175", + "val": "http://purl.obolibrary.org/obo/NCBITaxon_9606" + }, + { + "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", + "val": "L6b_1" + } + ], + "comments": [ + "A L6b_1 in the Human Brain has the gene markers SEMA3D, ITGA11, FAM160A1 with a NS-Forest FBeta value of 0.5724637681159421s." + ] + }, + "type": "INDIVIDUAL" + }, + { + "id": "http://example.org/1bcf4ddb-22fe-5ec7-ba66-4545beb7fb34", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://purl.obolibrary.org/obo/CLM_0010000", + "val": "http://purl.obolibrary.org/obo/CLM_1001186" + }, + { + "pred": "http://purl.obolibrary.org/obo/RO_0002175", + "val": "http://purl.obolibrary.org/obo/NCBITaxon_9606" + }, + { + "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", + "val": "Sst_16" + } + ], + "comments": [ + "A Sst_16 in the Human Brain has the gene markers LINC01630, DACH1, VAV3 with a NS-Forest FBeta value of 0.6000000000000001s." + ] + }, + "type": "INDIVIDUAL" + }, + { + "id": "http://example.org/1d48b629-c05d-5cbc-9c9f-60525a98cdc5", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://purl.obolibrary.org/obo/CLM_0010000", + "val": "http://purl.obolibrary.org/obo/CLM_1001234" + }, + { + "pred": "http://purl.obolibrary.org/obo/RO_0002175", + "val": "http://purl.obolibrary.org/obo/NCBITaxon_9606" + }, + { + "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", + "val": "Vip_25" + } + ], + "comments": [ + "A Vip_25 in the Human Brain has the gene markers NOX4, IQGAP2, CBLN4 with a NS-Forest FBeta value of 0.5275229357798166s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/1c2fd8f9-8f06-4d48-a697-a3ea1fa66df3", + "id": "http://example.org/1e2336d0-d9e4-521d-afc2-09d4115526fa", "meta": { "basicPropertyValues": [ { @@ -784867,12 +784982,12 @@ "type": "INDIVIDUAL" }, { - "id": "http://example.org/1d4a4b12-aabc-4a87-812a-d9e1e44fe6f0", + "id": "http://example.org/1ed5c9b6-1f52-5ce9-8dbf-6e1d39e8d767", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000032" + "val": "http://purl.obolibrary.org/obo/CLM_1001090" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -784880,22 +784995,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Ionocyte" + "val": "Astro_5" } ], "comments": [ - "A Ionocyte in the Human Lung has the gene markers ASCL3, BSND with a NS-Forest FBeta value of 0.82s." + "A Astro_5 in the Human Brain has the gene markers TNC, CD44 with a NS-Forest FBeta value of 0.7512626262626262s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/1e6bfaf1-a754-4523-bf1d-38ea1829eee6", + "id": "http://example.org/1fa83ce7-1ec2-580f-9ce0-3fbcfd41bbf0", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000082" + "val": "http://purl.obolibrary.org/obo/CLM_1001103" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -784903,22 +785018,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst" + "val": "L4 IT_4" } ], "comments": [ - "A Sst in the Human Brain has the gene markers SST, PLCH1 with a NS-Forest FBeta value of 0.842367005s." + "A L4 IT_4 in the Human Brain has the gene markers STAC, KCNH8, SYT2 with a NS-Forest FBeta value of 0.6526243093922651s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/1e758963-0383-4d66-ab30-a61aa36d6c92", + "id": "http://example.org/202d9151-96d8-571d-9d30-cb11ec2407ce", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001173" + "val": "http://purl.obolibrary.org/obo/CLM_1001171" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -784926,22 +785041,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst_3" + "val": "Sst_1" } ], "comments": [ - "A Sst_3 in the Human Brain has the gene markers TCF7L1, FBXL7, CBLN2 with a NS-Forest FBeta value of 0.6936997319034853s." + "A Sst_1 in the Human Brain has the gene markers NDST4, ANGPT1, EPB41L4A with a NS-Forest FBeta value of 0.5104166666666666s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/1e83c865-43c5-4b9d-b60d-5c1a38d1f443", + "id": "http://example.org/20b00f70-7a34-510a-9f91-2632f77e429b", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000084" + "val": "http://purl.obolibrary.org/obo/CLM_1001114" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -784949,22 +785064,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "VLMC" + "val": "L5 IT_5" } ], "comments": [ - "A VLMC in the Human Brain has the gene markers CARMN with a NS-Forest FBeta value of 0.863105175s." + "A L5 IT_5 in the Human Brain has the gene markers NPNT, CA10, RORB, KCNK2 with a NS-Forest FBeta value of 0.5813953488372092s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/1ef3db16-f77e-4805-bd49-90e2d51cbf01", + "id": "http://example.org/20ce6348-6659-527a-92b3-c9558d84770e", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000013" + "val": "http://purl.obolibrary.org/obo/CLM_1001211" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -784972,22 +785087,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "CD4 T cells" + "val": "Vip_2" } ], "comments": [ - "A CD4 T cells in the Human Lung has the gene markers LTB, CD3D with a NS-Forest FBeta value of 0.59s." + "A Vip_2 in the Human Brain has the gene markers IGFBP5, SLC22A3, PTGDS, VIP with a NS-Forest FBeta value of 0.4741379310344827s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/1f9d3b88-1c24-4ace-8f4c-118e31a87f05", + "id": "http://example.org/21ca11b6-0a8d-5d1f-b9a3-6601f36ad139", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000023" + "val": "http://purl.obolibrary.org/obo/CLM_1001132" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -784995,22 +785110,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "EC general capillary" + "val": "L6b_4" } ], "comments": [ - "A EC general capillary in the Human Lung has the gene markers FCN3, CA4 with a NS-Forest FBeta value of 0.78s." + "A L6b_4 in the Human Brain has the gene markers NR4A2, ATP8B4 with a NS-Forest FBeta value of 0.5812101910828025s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/1fe05063-7cc8-4085-9c90-426ec4a6b0fa", + "id": "http://example.org/22d84708-e779-5343-8e87-cc277cc3388d", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001166" + "val": "http://purl.obolibrary.org/obo/CLM_1001145" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -785018,22 +785133,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sncg_5" + "val": "Oligo_1" } ], "comments": [ - "A Sncg_5 in the Human Brain has the gene markers COL5A2, TMEM47, MEGF11 with a NS-Forest FBeta value of 0.5214285714285715s." + "A Oligo_1 in the Human Brain has the gene markers CERCAM, DOCK5 with a NS-Forest FBeta value of 0.24613623354321695s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/206659ec-f42b-4579-b959-eb29571ae5bb", + "id": "http://example.org/2345151c-05a6-510e-aff6-b4c94f935ad1", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001161" + "val": "http://purl.obolibrary.org/obo/CLM_1001176" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -785041,22 +785156,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Pvalb_9" + "val": "Sst_6" } ], "comments": [ - "A Pvalb_9 in the Human Brain has the gene markers PVALB, POSTN with a NS-Forest FBeta value of 0.5845323741007195s." + "A Sst_6 in the Human Brain has the gene markers DPP4, MAFB with a NS-Forest FBeta value of 0.38520801232665647s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/208a04a9-0f13-40d7-8185-3b829ed5f8ac", + "id": "http://example.org/240b8e84-9ef7-52de-aa94-ae81ba74bfec", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000067" + "val": "http://purl.obolibrary.org/obo/CLM_1001232" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -785064,22 +785179,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "L5 ET" + "val": "Vip_23" } ], "comments": [ - "A L5 ET in the Human Brain has the gene markers CHST8, POU3F1 with a NS-Forest FBeta value of 0.815891473s." + "A Vip_23 in the Human Brain has the gene markers KCNH8, EDNRA, KMO with a NS-Forest FBeta value of 0.54251269035533s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/224fdeea-6e5b-4e53-a193-2648ba422dfe", + "id": "http://example.org/24c315dd-91f2-536f-95e1-1b1b728b1bb2", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001192" + "val": "http://purl.obolibrary.org/obo/CLM_1001167" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -785087,22 +785202,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst_22" + "val": "Sncg_6" } ], "comments": [ - "A Sst_22 in the Human Brain has the gene markers EPB41L4A, ITGA8, SST with a NS-Forest FBeta value of 0.4351032448377581s." + "A Sncg_6 in the Human Brain has the gene markers THSD7B, ADAMTSL1, RELN with a NS-Forest FBeta value of 0.5738434163701067s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/23b88d49-1d31-4b0f-b46f-a77b72b9baa5", + "id": "http://example.org/25b79a5e-899a-57e1-94b6-885515a3ebfc", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000064" + "val": "http://purl.obolibrary.org/obo/CLM_1001110" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -785110,22 +785225,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Endo" + "val": "L5 IT_1" } ], "comments": [ - "A Endo in the Human Brain has the gene markers FLT1, ABCG2 with a NS-Forest FBeta value of 0.923892465s." + "A L5 IT_1 in the Human Brain has the gene markers CHST2, TLL1, RORB with a NS-Forest FBeta value of 0.6250000000000001s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/24194559-3f98-4228-aa9b-20e9bd34adde", + "id": "http://example.org/2824d66a-9f1e-5f44-b040-b0a50191bd0b", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001146" + "val": "http://purl.obolibrary.org/obo/CLM_1001140" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -785133,22 +785248,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Oligo_2" + "val": "Lamp5_5" } ], "comments": [ - "A Oligo_2 in the Human Brain has the gene markers MBOAT1, PLP1 with a NS-Forest FBeta value of 0.8189655172413793s." + "A Lamp5_5 in the Human Brain has the gene markers NDNF, NPNT, LAMP5 with a NS-Forest FBeta value of 0.6249999999999999s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/24472afb-7704-434f-8fc0-ead00419704d", + "id": "http://example.org/296ebb61-658c-574d-8c6b-8d973bb09401", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001140" + "val": "http://purl.obolibrary.org/obo/CLM_1001105" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -785156,22 +785271,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Lamp5_5" + "val": "L4 IT_6" } ], "comments": [ - "A Lamp5_5 in the Human Brain has the gene markers NDNF, NPNT, LAMP5 with a NS-Forest FBeta value of 0.6249999999999999s." + "A L4 IT_6 in the Human Brain has the gene markers PLEKHH2, CLMN, ST8SIA4 with a NS-Forest FBeta value of 0.6703910614525139s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/27ca98f6-77ae-4b31-8a0f-6baad7aa15c3", + "id": "http://example.org/2ca69824-405d-59c8-a937-48a7dd22677b", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000022" + "val": "http://purl.obolibrary.org/obo/CLM_1000078" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -785179,22 +785294,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "EC arterial" + "val": "Oligo" } ], "comments": [ - "A EC arterial in the Human Lung has the gene markers DKK2 with a NS-Forest FBeta value of 0.71s." + "A Oligo in the Human Brain has the gene markers ST18, PLP1 with a NS-Forest FBeta value of 0.97185637s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/2a10771a-5357-4041-89fc-c42a197f85c6", + "id": "http://example.org/2cf8de9a-248c-5795-96f2-6c2606c85559", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001209" + "val": "http://purl.obolibrary.org/obo/CLM_1001218" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -785202,22 +785317,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "VLMC_2" + "val": "Vip_9" } ], "comments": [ - "A VLMC_2 in the Human Brain has the gene markers SLC19A1, COLEC12 with a NS-Forest FBeta value of 0.876753507014028s." + "A Vip_9 in the Human Brain has the gene markers SLC7A11, TNS3, PPP1R1C, COBLL1 with a NS-Forest FBeta value of 0.48302107728337235s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/2a3da283-df5b-47b3-b8ab-59c3f7bc126c", + "id": "http://example.org/2dedc8b5-f654-5e99-9bd5-4f678f283795", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001236" + "val": "http://purl.obolibrary.org/obo/CLM_1001198" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -785225,22 +785340,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Vip_27" + "val": "Sst_28" } ], "comments": [ - "A Vip_27 in the Human Brain has the gene markers DACH2, CHRNA7, MIR4500HG, VIP with a NS-Forest FBeta value of 0.5466778805719091s." + "A Sst_28 in the Human Brain has the gene markers PROM1, NDST4, TRPC6 with a NS-Forest FBeta value of 0.5884615384615385s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/2af78fc8-424e-48e3-b379-747c17727c58", + "id": "http://example.org/2df41bbe-51b9-5ce9-b1b9-fc129d724f65", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001227" + "val": "http://purl.obolibrary.org/obo/CLM_1001218" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -785248,22 +785363,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Vip_18" + "val": "Vip_9" } ], "comments": [ - "A Vip_18 in the Human Brain has the gene markers NOX4, RXRG, NDST4 with a NS-Forest FBeta value of 0.38953488372093026s." + "A Vip_9 in the Human Brain has the gene markers SLC7A11, TNS3, PPP1R1C, COBLL1 with a NS-Forest FBeta value of 0.48302107728337235s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/2d448eff-9ef8-451a-adec-6df983d69ca2", + "id": "http://example.org/2eb90252-5a26-51ee-a031-a537f9a4bb5a", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000003" + "val": "http://purl.obolibrary.org/obo/CLM_1001138" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -785271,22 +785386,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Alveolar macrophages" + "val": "Lamp5_3" } ], "comments": [ - "A Alveolar macrophages in the Human Lung has the gene markers MSR1, FABP4 with a NS-Forest FBeta value of 0.80s." + "A Lamp5_3 in the Human Brain has the gene markers CA2, CPLX3, LAMP5 with a NS-Forest FBeta value of 0.6311576354679802s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/2d458b48-ff97-4f6d-a58c-3d9212b1fda5", + "id": "http://example.org/2f2926a8-3258-5ce8-b8cb-df93061dbdfb", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001090" + "val": "http://purl.obolibrary.org/obo/CLM_1001094" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -785294,22 +785409,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Astro_5" + "val": "L2/3 IT_1" } ], "comments": [ - "A Astro_5 in the Human Brain has the gene markers TNC, CD44 with a NS-Forest FBeta value of 0.7512626262626262s." + "A L2/3 IT_1 in the Human Brain has the gene markers PRSS12, ROS1, COL5A2, SLC38A11 with a NS-Forest FBeta value of 0.5517711171662125s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/2e913166-e966-474c-8e7e-ff08730f7766", + "id": "http://example.org/2f3cac5b-3a24-566b-b3d6-a38d79280e86", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001228" + "val": "http://purl.obolibrary.org/obo/CLM_1000066" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -785317,22 +785432,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Vip_19" + "val": "L4 IT" } ], "comments": [ - "A Vip_19 in the Human Brain has the gene markers CBLN1, HTR2C, VIP with a NS-Forest FBeta value of 0.5353075170842825s." + "A L4 IT in the Human Brain has the gene markers RORB, ST8SIA4 with a NS-Forest FBeta value of 0.720108696s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/2ea6164b-d4e0-4ce2-bbcf-0151f02495bc", + "id": "http://example.org/2f71c672-dd2e-54a3-9cda-c3e8dcb9046c", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001108" + "val": "http://purl.obolibrary.org/obo/CLM_1001159" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -785340,22 +785455,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "L5 ET_3" + "val": "Pvalb_7" } ], "comments": [ - "A L5 ET_3 in the Human Brain has the gene markers ONECUT1, TTC6, SEMA3D, FAM189A2 with a NS-Forest FBeta value of 0.8891454965357967s." + "A Pvalb_7 in the Human Brain has the gene markers SULF1, ZNF385D-AS2 with a NS-Forest FBeta value of 0.5650087260034904s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/2f41b00b-27c7-4cb3-a46a-5a5e77fe0e26", + "id": "http://example.org/2faf99ba-bb40-5d33-9fef-4f9ee2d3b8cf", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000084" + "val": "http://purl.obolibrary.org/obo/CLM_1000062" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -785363,22 +785478,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "VLMC" + "val": "Astro" } ], "comments": [ - "A VLMC in the Human Brain has the gene markers CARMN with a NS-Forest FBeta value of 0.863105175s." + "A Astro in the Human Brain has the gene markers OBI1-AS1 with a NS-Forest FBeta value of 0.957043843s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/2f452984-b170-49fa-b888-d7f87cd04e03", + "id": "http://example.org/2ff120ba-bb3d-5cf7-a945-ac45b6929de0", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000004" + "val": "http://purl.obolibrary.org/obo/CLM_1001086" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -785386,22 +785501,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Alveolar Mph CCL3+" + "val": "Astro_1" } ], "comments": [ - "A Alveolar Mph CCL3+ in the Human Lung has the gene markers TNIP3, CXCL5 with a NS-Forest FBeta value of 0.67s." + "A Astro_1 in the Human Brain has the gene markers SLC1A3, HPSE2 with a NS-Forest FBeta value of 0.6796875s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/308ae08d-30c3-414e-a631-1b290511c8be", + "id": "http://example.org/303c6892-88aa-5f88-9360-1f3764b73e4a", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001123" + "val": "http://purl.obolibrary.org/obo/CLM_1001104" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -785409,22 +785524,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "L6 CT_2" + "val": "L4 IT_5" } ], "comments": [ - "A L6 CT_2 in the Human Brain has the gene markers SYT6, ITGA11, SEMA5B with a NS-Forest FBeta value of 0.791868932038835s." + "A L4 IT_5 in the Human Brain has the gene markers COL22A1, CMAHP with a NS-Forest FBeta value of 0.6576797385620915s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/32dc9e23-7baa-4171-b2fb-634d2e37b7be", + "id": "http://example.org/309a5ea0-06d4-57ad-830f-9d31c64de81c", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000075" + "val": "http://purl.obolibrary.org/obo/CLM_1001128" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -785432,22 +785547,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Lamp5 Lhx6" + "val": "L6 IT_2" } ], "comments": [ - "A Lamp5 Lhx6 in the Human Brain has the gene markers CHST9, LAMP5 with a NS-Forest FBeta value of 0.821678322s." + "A L6 IT_2 in the Human Brain has the gene markers LINC00343, ADAMTS3, PXDN with a NS-Forest FBeta value of 0.5810546875s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/33c796d1-d754-445f-86a9-626032186884", + "id": "http://example.org/32d707b4-cc3e-5c76-86f5-594f63806004", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001179" + "val": "http://purl.obolibrary.org/obo/CLM_1001197" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -785455,22 +785570,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst_9" + "val": "Sst_27" } ], "comments": [ - "A Sst_9 in the Human Brain has the gene markers MYO10, ARHGAP6, FREM1 with a NS-Forest FBeta value of 0.3506097560975609s." + "A Sst_27 in the Human Brain has the gene markers EDNRA, MT-ND5, FREM1, SST with a NS-Forest FBeta value of 0.39168937329700276s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/351b7150-94e2-4433-a24e-3e5f1da5ce85", + "id": "http://example.org/33838354-d83a-5e9c-acd3-849a542fe7cb", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001204" + "val": "http://purl.obolibrary.org/obo/CLM_1001219" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -785478,22 +785593,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst_34" + "val": "Vip_10" } ], "comments": [ - "A Sst_34 in the Human Brain has the gene markers TTC29, TCF7L1 with a NS-Forest FBeta value of 0.565749235474006s." + "A Vip_10 in the Human Brain has the gene markers ABI3BP, KCNG2, PARD3B with a NS-Forest FBeta value of 0.5405405405405405s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/35b26e63-bd4a-4fe4-b3bc-80ad4a55c831", + "id": "http://example.org/3441c107-1ddf-5c54-ab62-fef0004c25d8", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001188" + "val": "http://purl.obolibrary.org/obo/CLM_1001089" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -785501,22 +785616,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst_18" + "val": "Astro_4" } ], "comments": [ - "A Sst_18 in the Human Brain has the gene markers ENOX2, PNOC, SST, RELN with a NS-Forest FBeta value of 0.34307875894988066s." + "A Astro_4 in the Human Brain has the gene markers PPP1R3C, ETNPPL, ID4, OBI1-AS1 with a NS-Forest FBeta value of 0.47279792746113986s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/36e7d3e2-c82c-4b3e-ab54-46e3b479ec43", + "id": "http://example.org/34b3e59a-53c2-51a5-9e27-c8ae9bd86b78", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001238" + "val": "http://purl.obolibrary.org/obo/CLM_1001203" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -785524,22 +785639,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Vip_29" + "val": "Sst_33" } ], "comments": [ - "A Vip_29 in the Human Brain has the gene markers IQGAP2, KCNJ2, TAC1, MYO5B, VIP with a NS-Forest FBeta value of 0.49180327868852464s." + "A Sst_33 in the Human Brain has the gene markers CRYBG3, BMP6, HTR2C with a NS-Forest FBeta value of 0.39086687306501544s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/387cc996-d53d-4915-8287-38dc5bcf53bf", + "id": "http://example.org/34e6e2f1-7987-57d7-bdae-531413a20b43", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001157" + "val": "http://purl.obolibrary.org/obo/CLM_1000082" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -785547,22 +785662,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Pvalb_5" + "val": "Sst" } ], "comments": [ - "A Pvalb_5 in the Human Brain has the gene markers SNTB1, COBLL1, GPR149, TAC1 with a NS-Forest FBeta value of 0.6364329268292682s." + "A Sst in the Human Brain has the gene markers SST, PLCH1 with a NS-Forest FBeta value of 0.842367005s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/38963ffe-cd49-4dd3-8582-0b5987143bbe", + "id": "http://example.org/3566a2aa-18eb-584f-8b5f-db7cb35f006e", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001220" + "val": "http://purl.obolibrary.org/obo/CLM_1001146" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -785570,22 +785685,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Vip_11" + "val": "Oligo_2" } ], "comments": [ - "A Vip_11 in the Human Brain has the gene markers ABI3BP, MCTP2, SLC22A3, PROS1 with a NS-Forest FBeta value of 0.43523676880222845s." + "A Oligo_2 in the Human Brain has the gene markers MBOAT1, PLP1 with a NS-Forest FBeta value of 0.8189655172413793s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/389e37ce-2de6-47f4-88f9-5ce07fa627a0", + "id": "http://example.org/35e5a788-9834-55de-b254-75f7464c6149", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001137" + "val": "http://purl.obolibrary.org/obo/CLM_1001174" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -785593,22 +785708,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Lamp5_2" + "val": "Sst_4" } ], "comments": [ - "A Lamp5_2 in the Human Brain has the gene markers PBX3, KIT with a NS-Forest FBeta value of 0.7316272965879266s." + "A Sst_4 in the Human Brain has the gene markers SCARA5, PIEZO2, CRYBG3, PLCH1 with a NS-Forest FBeta value of 0.5479002624671917s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/38b65b78-8e9c-4e2e-b3b5-cc121efd7805", + "id": "http://example.org/36a0c118-b61d-58ea-bb05-af465c70a750", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000050" + "val": "http://purl.obolibrary.org/obo/CLM_1001229" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -785616,22 +785731,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "pre-TB secretory" + "val": "Vip_20" } ], "comments": [ - "A pre-TB secretory in the Human Lung has the gene markers SCGB1A1, SFTPB with a NS-Forest FBeta value of 0.73s." + "A Vip_20 in the Human Brain has the gene markers CBLN1, VIPR2, PPP1R1C, VIP with a NS-Forest FBeta value of 0.3658536585365853s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/3a095232-0cbf-41e8-8958-ac2addae1fcd", + "id": "http://example.org/37e10059-310a-5ec3-b255-324d152608aa", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000025" + "val": "http://purl.obolibrary.org/obo/CLM_1001234" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -785639,22 +785754,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "EC venous systemic" + "val": "Vip_25" } ], "comments": [ - "A EC venous systemic in the Human Lung has the gene markers PLVAP, EMCN with a NS-Forest FBeta value of 0.63s." + "A Vip_25 in the Human Brain has the gene markers NOX4, IQGAP2, CBLN4 with a NS-Forest FBeta value of 0.5275229357798166s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/3a321ad7-1888-4b01-a3b7-99188a7bd701", + "id": "http://example.org/3828d162-ba43-5b08-8c40-8a1e55a13b5b", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000018" + "val": "http://purl.obolibrary.org/obo/CLM_1001191" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -785662,22 +785777,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "DC1" + "val": "Sst_21" } ], "comments": [ - "A DC1 in the Human Lung has the gene markers CLEC9A, DNASE1L3 with a NS-Forest FBeta value of 0.77s." + "A Sst_21 in the Human Brain has the gene markers ANGPT1, FBN2, COL24A1 with a NS-Forest FBeta value of 0.48315602836879434s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/3c077be9-c44f-42fd-81c3-66babe4ae6e6", + "id": "http://example.org/391ffeff-5536-5336-9be8-af5cac96c5ad", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001209" + "val": "http://purl.obolibrary.org/obo/CLM_1001196" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -785685,22 +785800,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "VLMC_2" + "val": "Sst_26" } ], "comments": [ - "A VLMC_2 in the Human Brain has the gene markers SLC19A1, COLEC12 with a NS-Forest FBeta value of 0.876753507014028s." + "A Sst_26 in the Human Brain has the gene markers MME, FBN2, MCUB with a NS-Forest FBeta value of 0.2326233183856502s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/3e57f2ca-fcaf-4e12-9a13-2d6151dc74bc", + "id": "http://example.org/395a60fc-8eb6-59fd-8e7f-2b2aa2ee1f19", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000062" + "val": "http://purl.obolibrary.org/obo/CLM_1001108" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -785708,22 +785823,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Astro" + "val": "L5 ET_3" } ], "comments": [ - "A Astro in the Human Brain has the gene markers OBI1-AS1 with a NS-Forest FBeta value of 0.957043843s." + "A L5 ET_3 in the Human Brain has the gene markers ONECUT1, TTC6, SEMA3D, FAM189A2 with a NS-Forest FBeta value of 0.8891454965357967s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/3e59fe52-b1c7-4d75-ac14-5021af1b146f", + "id": "http://example.org/3ad8742d-0658-520b-8caa-860b144f34dc", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001221" + "val": "http://purl.obolibrary.org/obo/CLM_1000063" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -785731,22 +785846,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Vip_12" + "val": "Chandelier" } ], "comments": [ - "A Vip_12 in the Human Brain has the gene markers SLC7A11, HCRTR2, EPS8 with a NS-Forest FBeta value of 0.5889057750759878s." + "A Chandelier in the Human Brain has the gene markers GPR149, CA8 with a NS-Forest FBeta value of 0.799748111s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/3ef3a5cc-f2a5-432a-b330-45ce01c00d39", + "id": "http://example.org/3ba3aa5e-ea84-51fe-a9f4-7909c0d4aad7", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001198" + "val": "http://purl.obolibrary.org/obo/CLM_1001103" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -785754,22 +785869,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst_28" + "val": "L4 IT_4" } ], "comments": [ - "A Sst_28 in the Human Brain has the gene markers PROM1, NDST4, TRPC6 with a NS-Forest FBeta value of 0.5884615384615385s." + "A L4 IT_4 in the Human Brain has the gene markers STAC, KCNH8, SYT2 with a NS-Forest FBeta value of 0.6526243093922651s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/40c40961-4a3f-4130-9e26-bff95e998493", + "id": "http://example.org/3d64eb99-dfa9-598f-9a97-ccee6a2b8f10", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000008" + "val": "http://purl.obolibrary.org/obo/CLM_1001119" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -785777,22 +785892,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "AT1" + "val": "L5/6 NP_4" } ], "comments": [ - "A AT1 in the Human Lung has the gene markers AGER with a NS-Forest FBeta value of 0.85s." + "A L5/6 NP_4 in the Human Brain has the gene markers FSHR, CLMN, TLL1 with a NS-Forest FBeta value of 0.740632318501171s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/4257b6bb-8850-4a27-a4ec-3b135706307c", + "id": "http://example.org/3d72dcc5-7f86-548f-8fdc-44923f674594", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001138" + "val": "http://purl.obolibrary.org/obo/CLM_1001186" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -785800,22 +785915,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Lamp5_3" + "val": "Sst_16" } ], "comments": [ - "A Lamp5_3 in the Human Brain has the gene markers CA2, CPLX3, LAMP5 with a NS-Forest FBeta value of 0.6311576354679802s." + "A Sst_16 in the Human Brain has the gene markers LINC01630, DACH1, VAV3 with a NS-Forest FBeta value of 0.6000000000000001s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/43b2c6c8-1362-4ee6-8613-9dd5062c50eb", + "id": "http://example.org/3eb9ceff-aba9-56ab-8ca9-65ac7268bc36", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000078" + "val": "http://purl.obolibrary.org/obo/CLM_1001141" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -785823,22 +785938,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Oligo" + "val": "Lamp5_6" } ], "comments": [ - "A Oligo in the Human Brain has the gene markers ST18, PLP1 with a NS-Forest FBeta value of 0.97185637s." + "A Lamp5_6 in the Human Brain has the gene markers NDNF, KIT, TRPC3 with a NS-Forest FBeta value of 0.6357493857493858s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/43dcd820-64cf-4b89-a3ca-3009f53b739f", + "id": "http://example.org/3ec9bd09-bdc7-5380-9786-be1dd067f4df", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001216" + "val": "http://purl.obolibrary.org/obo/CLM_1001215" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -785846,22 +785961,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Vip_7" + "val": "Vip_6" } ], "comments": [ - "A Vip_7 in the Human Brain has the gene markers CCN2, PCDH18, SEMA3C, HPSE2 with a NS-Forest FBeta value of 0.40059347181008903s." + "A Vip_6 in the Human Brain has the gene markers SMOC1, IQGAP2, PARD3B with a NS-Forest FBeta value of 0.5082179930795848s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/43e4a85a-e6bd-48b0-805c-667d2429cd32", + "id": "http://example.org/3f10f5b4-0c4e-5d1a-a5e2-372ac7d13e63", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000049" + "val": "http://purl.obolibrary.org/obo/CLM_1001160" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -785869,22 +785984,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Plasmacytoid DCs" + "val": "Pvalb_8" } ], "comments": [ - "A Plasmacytoid DCs in the Human Lung has the gene markers LILRA4, JCHAIN with a NS-Forest FBeta value of 0.79s." + "A Pvalb_8 in the Human Brain has the gene markers CA8, FGFR2, TAC1 with a NS-Forest FBeta value of 0.5676733780760627s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/4804916c-8dba-41c3-a92f-b810beb4364f", + "id": "http://example.org/40203770-4c13-5fcf-be4a-906a71c7044c", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001237" + "val": "http://purl.obolibrary.org/obo/CLM_1000083" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -785892,22 +786007,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Vip_28" + "val": "Sst Chodl" } ], "comments": [ - "A Vip_28 in the Human Brain has the gene markers HTR2C, DCN with a NS-Forest FBeta value of 0.3763440860215054s." + "A Sst Chodl in the Human Brain has the gene markers NPY with a NS-Forest FBeta value of 0.894026187s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/48237448-b3c2-41fb-ba13-3b92f772ceb4", + "id": "http://example.org/41a442a2-1c76-5e11-89eb-4732842dbc08", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001134" + "val": "http://purl.obolibrary.org/obo/CLM_1001140" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -785915,22 +786030,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "L6b_6" + "val": "Lamp5_5" } ], "comments": [ - "A L6b_6 in the Human Brain has the gene markers PCOLCE2, FAM160A1, SULF1 with a NS-Forest FBeta value of 0.570388349514563s." + "A Lamp5_5 in the Human Brain has the gene markers NDNF, NPNT, LAMP5 with a NS-Forest FBeta value of 0.6249999999999999s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/4832d15f-6d1b-4849-856e-cb93fd94b36b", + "id": "http://example.org/424c81ed-0299-5063-8215-628aaf9a2cfa", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001185" + "val": "http://purl.obolibrary.org/obo/CLM_1001210" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -785938,22 +786053,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst_15" + "val": "Vip_1" } ], "comments": [ - "A Sst_15 in the Human Brain has the gene markers DPP4, EPB41L4A, FREM1, PLCH1 with a NS-Forest FBeta value of 0.45995670995671s." + "A Vip_1 in the Human Brain has the gene markers FLT1, LRRC1, SHISA8 with a NS-Forest FBeta value of 0.400763358778626s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/490dcda1-91be-4712-9a81-de841942bf19", + "id": "http://example.org/42a5064f-aa11-5d12-a95d-4f62e8b70e38", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001216" + "val": "http://purl.obolibrary.org/obo/CLM_1001154" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -785961,22 +786076,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Vip_7" + "val": "Pvalb_2" } ], "comments": [ - "A Vip_7 in the Human Brain has the gene markers CCN2, PCDH18, SEMA3C, HPSE2 with a NS-Forest FBeta value of 0.40059347181008903s." + "A Pvalb_2 in the Human Brain has the gene markers BCHE, SEMA3C, GPC5 with a NS-Forest FBeta value of 0.7717391304347827s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/493420ec-1b85-4b6b-92b4-c80e9c5185fd", + "id": "http://example.org/43b78d16-7d68-59a5-b2ec-9e64c0aab706", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000056" + "val": "http://purl.obolibrary.org/obo/CLM_1000072" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -785984,22 +786099,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Smooth muscle" + "val": "L6 IT Car3" } ], "comments": [ - "A Smooth muscle in the Human Lung has the gene markers ACTA2, TAGLN with a NS-Forest FBeta value of 0.69s." + "A L6 IT Car3 in the Human Brain has the gene markers SMYD1, THEMIS with a NS-Forest FBeta value of 0.877752028s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/494a401d-12c2-4da4-9cf8-c05f359924ca", + "id": "http://example.org/441356e1-ec1c-5cfe-a1ec-67295dde7c7c", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001202" + "val": "http://purl.obolibrary.org/obo/CLM_1001131" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -786007,22 +786122,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst_32" + "val": "L6b_3" } ], "comments": [ - "A Sst_32 in the Human Brain has the gene markers HPGD, PENK, EYA2 with a NS-Forest FBeta value of 0.40567282321899734s." + "A L6b_3 in the Human Brain has the gene markers SLC15A5, ATP10A with a NS-Forest FBeta value of 0.6928969359331476s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/4e1c63a6-c2c4-47aa-9c12-7b5a98309712", + "id": "http://example.org/448d068f-c29d-5f30-ae31-75625d73a9aa", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001178" + "val": "http://purl.obolibrary.org/obo/CLM_1001131" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -786030,22 +786145,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst_8" + "val": "L6b_3" } ], "comments": [ - "A Sst_8 in the Human Brain has the gene markers STK32A, SYT9, RELN with a NS-Forest FBeta value of 0.5061619718309859s." + "A L6b_3 in the Human Brain has the gene markers SLC15A5, ATP10A with a NS-Forest FBeta value of 0.6928969359331476s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/4ed6e7bf-eba3-4a6c-9ac1-7a15b9262b8d", + "id": "http://example.org/450fc9f5-7471-5453-823d-943abd34688f", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000063" + "val": "http://purl.obolibrary.org/obo/CLM_1001192" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -786053,22 +786168,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Chandelier" + "val": "Sst_22" } ], "comments": [ - "A Chandelier in the Human Brain has the gene markers GPR149, CA8 with a NS-Forest FBeta value of 0.799748111s." + "A Sst_22 in the Human Brain has the gene markers EPB41L4A, ITGA8, SST with a NS-Forest FBeta value of 0.4351032448377581s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/4f4cca9c-aa01-4c5d-81c4-bb6014acc820", + "id": "http://example.org/45155d8a-9f26-56b9-8db9-644a7e854110", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001163" + "val": "http://purl.obolibrary.org/obo/CLM_1001237" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -786076,22 +786191,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sncg_2" + "val": "Vip_28" } ], "comments": [ - "A Sncg_2 in the Human Brain has the gene markers FOXO1, CA10, PRELID2, THSD7B with a NS-Forest FBeta value of 0.7396788990825688s." + "A Vip_28 in the Human Brain has the gene markers HTR2C, DCN with a NS-Forest FBeta value of 0.3763440860215054s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/4f7672a5-9b79-4d48-84e5-ceb6f2940582", + "id": "http://example.org/453505f4-5e04-5177-9ccf-a090201c377f", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001154" + "val": "http://purl.obolibrary.org/obo/CLM_1001217" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -786099,22 +786214,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Pvalb_2" + "val": "Vip_8" } ], "comments": [ - "A Pvalb_2 in the Human Brain has the gene markers BCHE, SEMA3C, GPC5 with a NS-Forest FBeta value of 0.7717391304347827s." + "A Vip_8 in the Human Brain has the gene markers VWDE, WSCD1, DACH2 with a NS-Forest FBeta value of 0.3183962264150943s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/504c1fa9-a4a3-4fdd-b8e9-823f43950925", + "id": "http://example.org/4657b4ff-a181-57d5-bc0c-730dbdb0ae24", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001141" + "val": "http://purl.obolibrary.org/obo/CLM_1001163" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -786122,22 +786237,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Lamp5_6" + "val": "Sncg_2" } ], "comments": [ - "A Lamp5_6 in the Human Brain has the gene markers NDNF, KIT, TRPC3 with a NS-Forest FBeta value of 0.6357493857493858s." + "A Sncg_2 in the Human Brain has the gene markers FOXO1, CA10, PRELID2, THSD7B with a NS-Forest FBeta value of 0.7396788990825688s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/50ff228f-6878-4784-bdc0-410c69782df3", + "id": "http://example.org/46a54cdc-c34f-5c18-93c7-8aa4ec900a08", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001233" + "val": "http://purl.obolibrary.org/obo/CLM_1001177" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -786145,22 +786260,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Vip_24" + "val": "Sst_7" } ], "comments": [ - "A Vip_24 in the Human Brain has the gene markers LYPD1, ENHO, CHRNA2 with a NS-Forest FBeta value of 0.36276223776223776s." + "A Sst_7 in the Human Brain has the gene markers EPSTI1, PIEZO2, HPSE2, PLCH1 with a NS-Forest FBeta value of 0.4469696969696969s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/51915dea-bf5d-4f94-b815-17d278624f43", + "id": "http://example.org/49159815-25ad-57ec-99db-2ed6ed08c7dc", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000001" + "val": "http://purl.obolibrary.org/obo/CLM_1001109" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -786168,22 +786283,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Adventitial fibroblasts" + "val": "L5 ET_4" } ], "comments": [ - "A Adventitial fibroblasts in the Human Lung has the gene markers SCARA5, CD248 with a NS-Forest FBeta value of 0.85s." + "A L5 ET_4 in the Human Brain has the gene markers EHF, FGF11 with a NS-Forest FBeta value of 0.7297605473204105s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/5363023d-2a34-4af5-8fff-0023af7216b4", + "id": "http://example.org/4b664b3d-ac50-5edd-911d-04a84cdf4e32", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001153" + "val": "http://purl.obolibrary.org/obo/CLM_1001112" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -786191,22 +786306,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Pvalb_1" + "val": "L5 IT_3" } ], "comments": [ - "A Pvalb_1 in the Human Brain has the gene markers MYBPC1, GPR149, SVIL with a NS-Forest FBeta value of 0.6944444444444444s." + "A L5 IT_3 in the Human Brain has the gene markers RPRM, HPCA, RORB with a NS-Forest FBeta value of 0.49479166666666663s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/54742535-fe02-4dec-8ca8-3b706bbf2c0c", + "id": "http://example.org/4c067fa8-8fe3-5d6f-b590-c83d41198ec5", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001174" + "val": "http://purl.obolibrary.org/obo/CLM_1001225" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -786214,22 +786329,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst_4" + "val": "Vip_16" } ], "comments": [ - "A Sst_4 in the Human Brain has the gene markers SCARA5, PIEZO2, CRYBG3, PLCH1 with a NS-Forest FBeta value of 0.5479002624671917s." + "A Vip_16 in the Human Brain has the gene markers NDST4, SEMA3C, HTR2C, VIP with a NS-Forest FBeta value of 0.38s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/54a00dae-0f18-4e97-bd19-3e5c6870c5ed", + "id": "http://example.org/4ef997bd-764c-5398-9c84-c7235047a4f7", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001156" + "val": "http://purl.obolibrary.org/obo/CLM_1001171" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -786237,22 +786352,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Pvalb_4" + "val": "Sst_1" } ], "comments": [ - "A Pvalb_4 in the Human Brain has the gene markers MT-ND4L, RGS5_ENSG00000143248, WIF1, TAC1 with a NS-Forest FBeta value of 0.4390934844192635s." + "A Sst_1 in the Human Brain has the gene markers NDST4, ANGPT1, EPB41L4A with a NS-Forest FBeta value of 0.5104166666666666s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/54fe0503-1d47-4b3a-945e-dcd3e02edb07", + "id": "http://example.org/4f07ac00-784e-5208-84e7-dae2729e2a36", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000043" + "val": "http://purl.obolibrary.org/obo/CLM_1000068" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -786260,22 +786375,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Neuroendocrine" + "val": "L5 IT" } ], "comments": [ - "A Neuroendocrine in the Human Lung has the gene markers CHGA, GRP with a NS-Forest FBeta value of 0.94s." + "A L5 IT in the Human Brain has the gene markers ARSJ, RORB, KCNK2 with a NS-Forest FBeta value of 0.764261336s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/55249b58-791c-4a2a-a405-f119fe3aab6e", + "id": "http://example.org/505fbaf3-71d6-5385-aa51-cb84473cb8ad", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001169" + "val": "http://purl.obolibrary.org/obo/CLM_1001165" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -786283,22 +786398,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sncg_8" + "val": "Sncg_4" } ], "comments": [ - "A Sncg_8 in the Human Brain has the gene markers NDST4, HTR2C, PRELID2 with a NS-Forest FBeta value of 0.49476135040745045s." + "A Sncg_4 in the Human Brain has the gene markers LINC01539, DCN, THSD7B with a NS-Forest FBeta value of 0.6752411575562701s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/55b039d5-93e2-48d6-b947-e19be24bc518", + "id": "http://example.org/50b158f1-f8d1-5702-b142-f44c5ee18e06", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001087" + "val": "http://purl.obolibrary.org/obo/CLM_1001209" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -786306,22 +786421,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Astro_2" + "val": "VLMC_2" } ], "comments": [ - "A Astro_2 in the Human Brain has the gene markers LINC01411, OBI1-AS1 with a NS-Forest FBeta value of 0.5566801619433198s." + "A VLMC_2 in the Human Brain has the gene markers SLC19A1, COLEC12 with a NS-Forest FBeta value of 0.876753507014028s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/55dfcf21-0b2d-4446-b1db-1d186a74fb8d", + "id": "http://example.org/515ceee6-c931-5335-a614-848f8aa99014", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001186" + "val": "http://purl.obolibrary.org/obo/CLM_1001099" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -786329,22 +786444,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst_16" + "val": "L2/3 IT_6" } ], "comments": [ - "A Sst_16 in the Human Brain has the gene markers LINC01630, DACH1, VAV3 with a NS-Forest FBeta value of 0.6000000000000001s." + "A L2/3 IT_6 in the Human Brain has the gene markers LINC00507, ADAMTS3, LY86-AS1 with a NS-Forest FBeta value of 0.5509868421052632s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/571be27e-ad46-4c79-9e9e-840c3242d4bc", + "id": "http://example.org/532fc6b2-507e-5854-b8cc-ced9a8d75238", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000045" + "val": "http://purl.obolibrary.org/obo/CLM_1001116" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -786352,22 +786467,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Non-classical monocytes" + "val": "L5/6 NP_1" } ], "comments": [ - "A Non-classical monocytes in the Human Lung has the gene markers LILRB2, LILRB1 with a NS-Forest FBeta value of 0.46s." + "A L5/6 NP_1 in the Human Brain has the gene markers BARX2, CD36, NPSR1-AS1 with a NS-Forest FBeta value of 0.49025974025974034s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/57bc5b03-85a3-4230-b633-836e9519a0c1", + "id": "http://example.org/5619b281-8a1c-5775-94ec-f177850fee5f", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001123" + "val": "http://purl.obolibrary.org/obo/CLM_1001187" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -786375,22 +786490,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "L6 CT_2" + "val": "Sst_17" } ], "comments": [ - "A L6 CT_2 in the Human Brain has the gene markers SYT6, ITGA11, SEMA5B with a NS-Forest FBeta value of 0.791868932038835s." + "A Sst_17 in the Human Brain has the gene markers PROM1, EYA2, PLCH1 with a NS-Forest FBeta value of 0.40226063829787234s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/57ceabc9-cb75-4253-85f4-3ef7186635ec", + "id": "http://example.org/5642be59-e304-57d7-986f-526d1280392a", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001191" + "val": "http://purl.obolibrary.org/obo/CLM_1001174" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -786398,22 +786513,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst_21" + "val": "Sst_4" } ], "comments": [ - "A Sst_21 in the Human Brain has the gene markers ANGPT1, FBN2, COL24A1 with a NS-Forest FBeta value of 0.48315602836879434s." + "A Sst_4 in the Human Brain has the gene markers SCARA5, PIEZO2, CRYBG3, PLCH1 with a NS-Forest FBeta value of 0.5479002624671917s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/58496165-7a56-4e6d-bd50-1c3a8c9dc8f1", + "id": "http://example.org/57814aa7-ba76-5385-80ed-06a91dc142db", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001164" + "val": "http://purl.obolibrary.org/obo/CLM_1001141" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -786421,22 +786536,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sncg_3" + "val": "Lamp5_6" } ], "comments": [ - "A Sncg_3 in the Human Brain has the gene markers SEMA3C, MYO1B, VAV3 with a NS-Forest FBeta value of 0.4528985507246377s." + "A Lamp5_6 in the Human Brain has the gene markers NDNF, KIT, TRPC3 with a NS-Forest FBeta value of 0.6357493857493858s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/5861e31b-2f69-47f7-b807-45484d5f4dad", + "id": "http://example.org/5834aad5-b359-57f0-ada6-43ff0f86d35e", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001183" + "val": "http://purl.obolibrary.org/obo/CLM_1000062" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -786444,22 +786559,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst_13" + "val": "Astro" } ], "comments": [ - "A Sst_13 in the Human Brain has the gene markers FBN2, TRPC6, EPB41L4A with a NS-Forest FBeta value of 0.5461876832844575s." + "A Astro in the Human Brain has the gene markers OBI1-AS1 with a NS-Forest FBeta value of 0.957043843s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/58716fb2-4237-429e-b38f-db1adf6daab9", + "id": "http://example.org/58c601b4-bff0-5d0b-b213-ff22c11b07ed", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000012" + "val": "http://purl.obolibrary.org/obo/CLM_1000084" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -786467,22 +786582,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Basal resting" + "val": "VLMC" } ], "comments": [ - "A Basal resting in the Human Lung has the gene markers KRT15, KRT17 with a NS-Forest FBeta value of 0.75s." + "A VLMC in the Human Brain has the gene markers CARMN with a NS-Forest FBeta value of 0.863105175s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/58ad3c67-8972-4838-b8d8-d0950413aad2", + "id": "http://example.org/59a468ac-c3c6-54db-a942-fa81bbdb0761", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001215" + "val": "http://purl.obolibrary.org/obo/CLM_1001185" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -786490,17 +786605,86 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Vip_6" + "val": "Sst_15" } ], "comments": [ - "A Vip_6 in the Human Brain has the gene markers SMOC1, IQGAP2, PARD3B with a NS-Forest FBeta value of 0.5082179930795848s." + "A Sst_15 in the Human Brain has the gene markers DPP4, EPB41L4A, FREM1, PLCH1 with a NS-Forest FBeta value of 0.45995670995671s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/59171ff9-ff43-4b64-a24f-8b58b9ccdd99", + "id": "http://example.org/59badafe-41af-5657-a882-26529506fa0d", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://purl.obolibrary.org/obo/CLM_0010000", + "val": "http://purl.obolibrary.org/obo/CLM_1001232" + }, + { + "pred": "http://purl.obolibrary.org/obo/RO_0002175", + "val": "http://purl.obolibrary.org/obo/NCBITaxon_9606" + }, + { + "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", + "val": "Vip_23" + } + ], + "comments": [ + "A Vip_23 in the Human Brain has the gene markers KCNH8, EDNRA, KMO with a NS-Forest FBeta value of 0.54251269035533s." + ] + }, + "type": "INDIVIDUAL" + }, + { + "id": "http://example.org/59c956ae-d2cb-52f1-ba04-644542b2a326", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://purl.obolibrary.org/obo/CLM_0010000", + "val": "http://purl.obolibrary.org/obo/CLM_1001221" + }, + { + "pred": "http://purl.obolibrary.org/obo/RO_0002175", + "val": "http://purl.obolibrary.org/obo/NCBITaxon_9606" + }, + { + "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", + "val": "Vip_12" + } + ], + "comments": [ + "A Vip_12 in the Human Brain has the gene markers SLC7A11, HCRTR2, EPS8 with a NS-Forest FBeta value of 0.5889057750759878s." + ] + }, + "type": "INDIVIDUAL" + }, + { + "id": "http://example.org/59caff3f-4d4c-548d-956e-64862776ab8d", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://purl.obolibrary.org/obo/CLM_0010000", + "val": "http://purl.obolibrary.org/obo/CLM_1001122" + }, + { + "pred": "http://purl.obolibrary.org/obo/RO_0002175", + "val": "http://purl.obolibrary.org/obo/NCBITaxon_9606" + }, + { + "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", + "val": "L6 CT_1" + } + ], + "comments": [ + "A L6 CT_1 in the Human Brain has the gene markers LGR6, OR1Q1, SULF1 with a NS-Forest FBeta value of 0.665374677002584s." + ] + }, + "type": "INDIVIDUAL" + }, + { + "id": "http://example.org/5a897c51-9e24-5ac5-af82-020dcc94f5f7", "meta": { "basicPropertyValues": [ { @@ -786523,12 +786707,12 @@ "type": "INDIVIDUAL" }, { - "id": "http://example.org/59b8e231-2f2a-4f17-9e4c-558c6ff072aa", + "id": "http://example.org/5aa178b7-96f6-53fb-9cf5-8eb305a670a4", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001133" + "val": "http://purl.obolibrary.org/obo/CLM_1001222" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -786536,22 +786720,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "L6b_5" + "val": "Vip_13" } ], "comments": [ - "A L6b_5 in the Human Brain has the gene markers NXPH4, NR4A2, SEMA3E with a NS-Forest FBeta value of 0.5693519079345852s." + "A Vip_13 in the Human Brain has the gene markers ST18, PTGDS, VIP with a NS-Forest FBeta value of 0.42776639344262285s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/59d628d3-9629-41fc-8fbc-3d3adf676d0a", + "id": "http://example.org/5abfad32-62f8-53bf-bad2-4bcafe571e93", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000015" + "val": "http://purl.obolibrary.org/obo/CLM_1000081" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -786559,22 +786743,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Classical monocytes" + "val": "Sncg" } ], "comments": [ - "A Classical monocytes in the Human Lung has the gene markers S100A12, FCN1 with a NS-Forest FBeta value of 0.77s." + "A Sncg in the Human Brain has the gene markers RXRG, THSD7B with a NS-Forest FBeta value of 0.628943702s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/59e23b4d-829a-4cc0-84bb-036e8731e60c", + "id": "http://example.org/5b0db653-a972-52d2-b2f8-a7bbee742799", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001234" + "val": "http://purl.obolibrary.org/obo/CLM_1001136" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -786582,22 +786766,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Vip_25" + "val": "Lamp5_1" } ], "comments": [ - "A Vip_25 in the Human Brain has the gene markers NOX4, IQGAP2, CBLN4 with a NS-Forest FBeta value of 0.5275229357798166s." + "A Lamp5_1 in the Human Brain has the gene markers ADAMTS20, KIT, FREM1 with a NS-Forest FBeta value of 0.48856548856548865s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/59e43f0e-f7bc-49da-8686-a61daf6acd1c", + "id": "http://example.org/5bcc50dd-a204-5efc-afd6-6eac2c7fac01", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001226" + "val": "http://purl.obolibrary.org/obo/CLM_1001124" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -786605,22 +786789,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Vip_17" + "val": "L6 CT_3" } ], "comments": [ - "A Vip_17 in the Human Brain has the gene markers PENK, PARD3B with a NS-Forest FBeta value of 0.6040502793296089s." + "A L6 CT_3 in the Human Brain has the gene markers SULF1, MEIS2, ADAMTSL1, KCNH5 with a NS-Forest FBeta value of 0.632267441860465s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/5a00c58e-24db-48f5-beab-db654b778265", + "id": "http://example.org/5bd9bd05-6bcf-5b18-a72d-edbc4e8608d2", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000002" + "val": "http://purl.obolibrary.org/obo/CLM_1001148" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -786628,22 +786812,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Alveolar fibroblasts" + "val": "Oligo_4" } ], "comments": [ - "A Alveolar fibroblasts in the Human Lung has the gene markers AOC3, LUM with a NS-Forest FBeta value of 0.70s." + "A Oligo_4 in the Human Brain has the gene markers OPALIN, TRIM59, CERCAM with a NS-Forest FBeta value of 0.5434782608695652s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/5a7c0753-1703-4df7-bc5d-4387302a9ba9", + "id": "http://example.org/5c09b5f6-7457-5662-bb6a-513e627a3cb3", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001203" + "val": "http://purl.obolibrary.org/obo/CLM_1001204" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -786651,22 +786835,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst_33" + "val": "Sst_34" } ], "comments": [ - "A Sst_33 in the Human Brain has the gene markers CRYBG3, BMP6, HTR2C with a NS-Forest FBeta value of 0.39086687306501544s." + "A Sst_34 in the Human Brain has the gene markers TTC29, TCF7L1 with a NS-Forest FBeta value of 0.565749235474006s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/5b0a2e31-ad33-4746-876e-e0c08bc04f39", + "id": "http://example.org/5c0e921e-5977-5ca1-98e6-9c1df09cc2d2", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000037" + "val": "http://purl.obolibrary.org/obo/CLM_1001146" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -786674,22 +786858,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Mesothelium" + "val": "Oligo_2" } ], "comments": [ - "A Mesothelium in the Human Lung has the gene markers CALB2, PRG4 with a NS-Forest FBeta value of 0.89s." + "A Oligo_2 in the Human Brain has the gene markers MBOAT1, PLP1 with a NS-Forest FBeta value of 0.8189655172413793s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/5b0fa9ca-41e2-4cbf-8150-5eacead7b1e2", + "id": "http://example.org/5c7c827b-8a88-5144-8298-fd71750cd50f", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001163" + "val": "http://purl.obolibrary.org/obo/CLM_1001166" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -786697,22 +786881,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sncg_2" + "val": "Sncg_5" } ], "comments": [ - "A Sncg_2 in the Human Brain has the gene markers FOXO1, CA10, PRELID2, THSD7B with a NS-Forest FBeta value of 0.7396788990825688s." + "A Sncg_5 in the Human Brain has the gene markers COL5A2, TMEM47, MEGF11 with a NS-Forest FBeta value of 0.5214285714285715s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/5b4c81b3-24bf-422e-a3f4-5d84c4b4140d", + "id": "http://example.org/5ce650bd-4b06-5078-af77-d194161a51d5", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000080" + "val": "http://purl.obolibrary.org/obo/CLM_1001115" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -786720,22 +786904,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Pvalb" + "val": "L5 IT_6" } ], "comments": [ - "A Pvalb in the Human Brain has the gene markers PVALB, TAC1, MYO5B with a NS-Forest FBeta value of 0.691998764s." + "A L5 IT_6 in the Human Brain has the gene markers NPFFR2, SULF2, RORB with a NS-Forest FBeta value of 0.6619822485207101s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/5c3b06bb-3d9f-420b-853b-209e6199a201", + "id": "http://example.org/5e6635dc-e122-5e03-b1f4-5d7d7ba986df", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001231" + "val": "http://purl.obolibrary.org/obo/CLM_1001104" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -786743,22 +786927,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Vip_22" + "val": "L4 IT_5" } ], "comments": [ - "A Vip_22 in the Human Brain has the gene markers ABI3BP, SLC7A11, EDNRA with a NS-Forest FBeta value of 0.5279126213592233s." + "A L4 IT_5 in the Human Brain has the gene markers COL22A1, CMAHP with a NS-Forest FBeta value of 0.6576797385620915s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/5f095659-97ae-43b5-b5f9-66b4eb0f5262", + "id": "http://example.org/5ea4fcf6-f505-5700-ae53-ff241ccdbcf9", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001160" + "val": "http://purl.obolibrary.org/obo/CLM_1000082" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -786766,22 +786950,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Pvalb_8" + "val": "Sst" } ], "comments": [ - "A Pvalb_8 in the Human Brain has the gene markers CA8, FGFR2, TAC1 with a NS-Forest FBeta value of 0.5676733780760627s." + "A Sst in the Human Brain has the gene markers SST, PLCH1 with a NS-Forest FBeta value of 0.842367005s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/6024bb92-e066-4c6f-bb81-5c614be639d3", + "id": "http://example.org/5eb56099-d3c8-5678-80cd-8eb3a98d9785", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001195" + "val": "http://purl.obolibrary.org/obo/CLM_1001213" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -786789,22 +786973,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst_25" + "val": "Vip_4" } ], "comments": [ - "A Sst_25 in the Human Brain has the gene markers BLM, CALB1, STK32B with a NS-Forest FBeta value of 0.45689655172413796s." + "A Vip_4 in the Human Brain has the gene markers WNT5A, ABI3BP, VCAN with a NS-Forest FBeta value of 0.546875s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/6080f460-e801-4f87-8103-71d19d67706d", + "id": "http://example.org/6335c542-c4f5-501b-ab63-39ec43434a16", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001172" + "val": "http://purl.obolibrary.org/obo/CLM_1000083" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -786812,22 +786996,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst_2" + "val": "Sst Chodl" } ], "comments": [ - "A Sst_2 in the Human Brain has the gene markers HPGD, RGS5_ENSG00000143248, SPON1 with a NS-Forest FBeta value of 0.5613577023498695s." + "A Sst Chodl in the Human Brain has the gene markers NPY with a NS-Forest FBeta value of 0.894026187s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/60e82f71-d0a8-498e-ad08-0f1119bf0b57", + "id": "http://example.org/636273dc-62e1-544c-8627-672c58fb8824", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001203" + "val": "http://purl.obolibrary.org/obo/CLM_1001179" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -786835,22 +787019,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst_33" + "val": "Sst_9" } ], "comments": [ - "A Sst_33 in the Human Brain has the gene markers CRYBG3, BMP6, HTR2C with a NS-Forest FBeta value of 0.39086687306501544s." + "A Sst_9 in the Human Brain has the gene markers MYO10, ARHGAP6, FREM1 with a NS-Forest FBeta value of 0.3506097560975609s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/6184c386-16c1-4ac0-9529-8ea52297106a", + "id": "http://example.org/6520b834-92d7-55aa-892b-6bdb28ce3a4e", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001222" + "val": "http://purl.obolibrary.org/obo/CLM_1001173" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -786858,22 +787042,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Vip_13" + "val": "Sst_3" } ], "comments": [ - "A Vip_13 in the Human Brain has the gene markers ST18, PTGDS, VIP with a NS-Forest FBeta value of 0.42776639344262285s." + "A Sst_3 in the Human Brain has the gene markers TCF7L1, FBXL7, CBLN2 with a NS-Forest FBeta value of 0.6936997319034853s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/618a6b0f-362f-47a6-8589-c5ccec331ae6", + "id": "http://example.org/65fcc9e2-6b89-5c4b-b320-acd53356937d", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001223" + "val": "http://purl.obolibrary.org/obo/CLM_1001120" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -786881,22 +787065,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Vip_14" + "val": "L5/6 NP_5" } ], "comments": [ - "A Vip_14 in the Human Brain has the gene markers ST18, KCNH8, CA10, VIP with a NS-Forest FBeta value of 0.5968468468468467s." + "A L5/6 NP_5 in the Human Brain has the gene markers COL9A1, NPSR1, TLL1 with a NS-Forest FBeta value of 0.5373831775700935s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/621caebd-8dd1-4b89-8132-aab3795efc0c", + "id": "http://example.org/66c30064-a0a6-5421-abc8-26185ca2130d", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001188" + "val": "http://purl.obolibrary.org/obo/CLM_1000066" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -786904,22 +787088,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst_18" + "val": "L4 IT" } ], "comments": [ - "A Sst_18 in the Human Brain has the gene markers ENOX2, PNOC, SST, RELN with a NS-Forest FBeta value of 0.34307875894988066s." + "A L4 IT in the Human Brain has the gene markers RORB, ST8SIA4 with a NS-Forest FBeta value of 0.720108696s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/6284d436-fd2f-4bdf-810b-d2e1ade07747", + "id": "http://example.org/6791b32b-6a9a-570f-8cf6-0d7cbfc303a4", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001166" + "val": "http://purl.obolibrary.org/obo/CLM_1001165" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -786927,22 +787111,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sncg_5" + "val": "Sncg_4" } ], "comments": [ - "A Sncg_5 in the Human Brain has the gene markers COL5A2, TMEM47, MEGF11 with a NS-Forest FBeta value of 0.5214285714285715s." + "A Sncg_4 in the Human Brain has the gene markers LINC01539, DCN, THSD7B with a NS-Forest FBeta value of 0.6752411575562701s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/63a55b06-687e-4521-83f8-1f61adef6e2c", + "id": "http://example.org/68d9d04b-3a34-50c9-a127-dfd92c029121", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001197" + "val": "http://purl.obolibrary.org/obo/CLM_1001205" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -786950,22 +787134,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst_27" + "val": "Sst_35" } ], "comments": [ - "A Sst_27 in the Human Brain has the gene markers EDNRA, MT-ND5, FREM1, SST with a NS-Forest FBeta value of 0.39168937329700276s." + "A Sst_35 in the Human Brain has the gene markers ACVR1C, EYA2, TRIM67 with a NS-Forest FBeta value of 0.5226480836236933s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/65933b13-741b-4c8a-9b8f-95ccaf50699c", + "id": "http://example.org/69c708db-8620-5031-a02e-11c8a733a3d9", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000029" + "val": "http://purl.obolibrary.org/obo/CLM_1000072" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -786973,22 +787157,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Hematopoietic stem cells" + "val": "L6 IT Car3" } ], "comments": [ - "A Hematopoietic stem cells in the Human Lung has the gene markers CYTL1, FAM30A with a NS-Forest FBeta value of 0.66s." + "A L6 IT Car3 in the Human Brain has the gene markers SMYD1, THEMIS with a NS-Forest FBeta value of 0.877752028s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/65ad63f8-e3a8-44f4-b32e-845df5449162", + "id": "http://example.org/6aa60a29-474e-5b4d-861c-f1ecb95a4eb2", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001136" + "val": "http://purl.obolibrary.org/obo/CLM_1001096" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -786996,22 +787180,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Lamp5_1" + "val": "L2/3 IT_3" } ], "comments": [ - "A Lamp5_1 in the Human Brain has the gene markers ADAMTS20, KIT, FREM1 with a NS-Forest FBeta value of 0.48856548856548865s." + "A L2/3 IT_3 in the Human Brain has the gene markers COL27A1, ONECUT2, MOXD1, BMPR1B with a NS-Forest FBeta value of 0.675117924528302s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/662b227f-9c26-48d0-85bd-8283a03573d9", + "id": "http://example.org/6b375195-f489-5039-8527-fa4343cd3c4a", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001149" + "val": "http://purl.obolibrary.org/obo/CLM_1001190" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -787019,22 +787203,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Pax6_1" + "val": "Sst_20" } ], "comments": [ - "A Pax6_1 in the Human Brain has the gene markers IGFBP7, EPS8, HCRTR2 with a NS-Forest FBeta value of 0.767426273458445s." + "A Sst_20 in the Human Brain has the gene markers QRFPR, HGF, RELN with a NS-Forest FBeta value of 0.4671717171717172s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/6640ef4e-1597-40b3-9929-f90f51be90a5", + "id": "http://example.org/6b43f98e-8399-55b8-bdeb-d720df31fdd7", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001118" + "val": "http://purl.obolibrary.org/obo/CLM_1001106" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -787042,22 +787226,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "L5/6 NP_3" + "val": "L5 ET_1" } ], "comments": [ - "A L5/6 NP_3 in the Human Brain has the gene markers NPSR1-AS1, PLPP3, KIT with a NS-Forest FBeta value of 0.5273892773892773s." + "A L5 ET_1 in the Human Brain has the gene markers LINC00922, POU3F1 with a NS-Forest FBeta value of 0.728891820580475s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/671e8785-3001-4073-bdd8-024367184e68", + "id": "http://example.org/6b6867f0-1035-5e42-96e2-814dc660eff8", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001145" + "val": "http://purl.obolibrary.org/obo/CLM_1001180" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -787065,22 +787249,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Oligo_1" + "val": "Sst_10" } ], "comments": [ - "A Oligo_1 in the Human Brain has the gene markers CERCAM, DOCK5 with a NS-Forest FBeta value of 0.24613623354321695s." + "A Sst_10 in the Human Brain has the gene markers HPSE2, EYA4, SST, PLCH1 with a NS-Forest FBeta value of 0.3615384615384615s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/6825386c-334c-41dc-9a46-0c61efadf209", + "id": "http://example.org/6c174d26-750e-5bf2-b48a-7d93f356b254", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001225" + "val": "http://purl.obolibrary.org/obo/CLM_1001117" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -787088,22 +787272,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Vip_16" + "val": "L5/6 NP_2" } ], "comments": [ - "A Vip_16 in the Human Brain has the gene markers NDST4, SEMA3C, HTR2C, VIP with a NS-Forest FBeta value of 0.38s." + "A L5/6 NP_2 in the Human Brain has the gene markers SLC17A6, CRYM with a NS-Forest FBeta value of 0.4607508532423208s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/687a43d5-0670-49ac-a744-9decf3ca5be6", + "id": "http://example.org/6cecaa88-6816-57b1-b62c-0d3dd5ad66bd", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001175" + "val": "http://purl.obolibrary.org/obo/CLM_1001164" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -787111,22 +787295,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst_5" + "val": "Sncg_3" } ], "comments": [ - "A Sst_5 in the Human Brain has the gene markers SH3RF2, NPY, CALB1 with a NS-Forest FBeta value of 0.5248833592534992s." + "A Sncg_3 in the Human Brain has the gene markers SEMA3C, MYO1B, VAV3 with a NS-Forest FBeta value of 0.4528985507246377s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/68a3748e-03ab-464f-84ad-f4c2b3c733b4", + "id": "http://example.org/6dad808a-fcf3-5bf4-8599-93351ea3ab66", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000051" + "val": "http://purl.obolibrary.org/obo/CLM_1001172" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -787134,22 +787318,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "SM activated stress response" + "val": "Sst_2" } ], "comments": [ - "A SM activated stress response in the Human Lung has the gene markers RERGL, C11orf96 with a NS-Forest FBeta value of 0.58s." + "A Sst_2 in the Human Brain has the gene markers HPGD, RGS5_ENSG00000143248, SPON1 with a NS-Forest FBeta value of 0.5613577023498695s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/68e218e7-b1a6-4533-a239-5355ea2875c4", + "id": "http://example.org/6dcf455c-31bd-58cd-9bff-d62b1871cd3a", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000062" + "val": "http://purl.obolibrary.org/obo/CLM_1001112" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -787157,22 +787341,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Astro" + "val": "L5 IT_3" } ], "comments": [ - "A Astro in the Human Brain has the gene markers OBI1-AS1 with a NS-Forest FBeta value of 0.957043843s." + "A L5 IT_3 in the Human Brain has the gene markers RPRM, HPCA, RORB with a NS-Forest FBeta value of 0.49479166666666663s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/6933d7de-7084-47aa-9b33-c852a24dfe84", + "id": "http://example.org/6e98c20d-30b7-5a38-89a7-992a776c53ea", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001158" + "val": "http://purl.obolibrary.org/obo/CLM_1000081" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -787180,22 +787364,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Pvalb_6" + "val": "Sncg" } ], "comments": [ - "A Pvalb_6 in the Human Brain has the gene markers POSTN, SULF1, CEMIP, RNF144B with a NS-Forest FBeta value of 0.29255319148936176s." + "A Sncg in the Human Brain has the gene markers RXRG, THSD7B with a NS-Forest FBeta value of 0.628943702s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/699653f9-337e-4c77-818b-8666c575560d", + "id": "http://example.org/6f0e6c63-4188-5b12-88b2-a2fae74cee13", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001170" + "val": "http://purl.obolibrary.org/obo/CLM_1000079" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -787203,22 +787387,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst Chodl_1" + "val": "Pax6" } ], "comments": [ - "A Sst Chodl_1 in the Human Brain has the gene markers NPY with a NS-Forest FBeta value of 0.894026186579378s." + "A Pax6 in the Human Brain has the gene markers RELN, HCRTR2 with a NS-Forest FBeta value of 0.724125093s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/6a0dd9b9-02d1-4911-8205-a82cd058279e", + "id": "http://example.org/6f34892a-4c29-5b8c-9d8c-3364a66ed435", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000054" + "val": "http://purl.obolibrary.org/obo/CLM_1001196" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -787226,22 +787410,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "SMG serous (bronchial)" + "val": "Sst_26" } ], "comments": [ - "A SMG serous (bronchial) in the Human Lung has the gene markers PRR4, C6orf58 with a NS-Forest FBeta value of 0.75s." + "A Sst_26 in the Human Brain has the gene markers MME, FBN2, MCUB with a NS-Forest FBeta value of 0.2326233183856502s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/6acb9255-58fe-4869-9779-234c1447cd09", + "id": "http://example.org/6fdb13b4-30ff-5951-b72d-6291263b50c9", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001089" + "val": "http://purl.obolibrary.org/obo/CLM_1001086" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -787249,22 +787433,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Astro_4" + "val": "Astro_1" } ], "comments": [ - "A Astro_4 in the Human Brain has the gene markers PPP1R3C, ETNPPL, ID4, OBI1-AS1 with a NS-Forest FBeta value of 0.47279792746113986s." + "A Astro_1 in the Human Brain has the gene markers SLC1A3, HPSE2 with a NS-Forest FBeta value of 0.6796875s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/6bcac2e9-ca94-4342-b2ba-f169a06ce6d2", + "id": "http://example.org/70e6b62a-8054-5390-9cc4-715eaa311a76", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000028" + "val": "http://purl.obolibrary.org/obo/CLM_1001128" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -787272,45 +787456,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Goblet (subsegmental)" + "val": "L6 IT_2" } ], "comments": [ - "A Goblet (subsegmental) in the Human Lung has the gene markers MTRNR2L8, SCGB1A1 with a NS-Forest FBeta value of 0.61s." + "A L6 IT_2 in the Human Brain has the gene markers LINC00343, ADAMTS3, PXDN with a NS-Forest FBeta value of 0.5810546875s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/6cae250e-47da-4f3c-bcf5-0680109a77bc", + "id": "http://example.org/711e9ee0-085e-5c70-9ed1-64b294bd454f", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001155" - }, - { - "pred": "http://purl.obolibrary.org/obo/RO_0002175", - "val": "http://purl.obolibrary.org/obo/NCBITaxon_9606" - }, - { - "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Pvalb_3" - } - ], - "comments": [ - "A Pvalb_3 in the Human Brain has the gene markers TAFA4, SYT10, ANOS1, HTR4 with a NS-Forest FBeta value of 0.635593220338983s." - ] - }, - "type": "INDIVIDUAL" - }, - { - "id": "http://example.org/6d289c03-0476-40c6-9740-f38ce36ee205", - "meta": { - "basicPropertyValues": [ - { - "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001201" + "val": "http://purl.obolibrary.org/obo/CLM_1000074" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -787318,22 +787479,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst_31" + "val": "Lamp5" } ], "comments": [ - "A Sst_31 in the Human Brain has the gene markers FRZB, CBLN4, RGS5_ENSG00000143248, ARHGAP10 with a NS-Forest FBeta value of 0.4743083003952569s." + "A Lamp5 in the Human Brain has the gene markers LINC00298, KIT with a NS-Forest FBeta value of 0.814687838s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/6dafb4f0-cb9b-40ee-8107-bfd1db796c10", + "id": "http://example.org/713d5c24-5c16-5d44-9c97-630728ef7dea", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001237" + "val": "http://purl.obolibrary.org/obo/CLM_1001238" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -787341,17 +787502,17 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Vip_28" + "val": "Vip_29" } ], "comments": [ - "A Vip_28 in the Human Brain has the gene markers HTR2C, DCN with a NS-Forest FBeta value of 0.3763440860215054s." + "A Vip_29 in the Human Brain has the gene markers IQGAP2, KCNJ2, TAC1, MYO5B, VIP with a NS-Forest FBeta value of 0.49180327868852464s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/6e37c6a2-5c93-40c1-b8ce-094f7e3a5847", + "id": "http://example.org/71862bd2-d5f1-5b8c-9813-a451e823b599", "meta": { "basicPropertyValues": [ { @@ -787374,288 +787535,12 @@ "type": "INDIVIDUAL" }, { - "id": "http://example.org/6e998bae-8655-4876-830f-7f6004f62735", + "id": "http://example.org/71b542b7-a06f-52ce-8c0e-cd661ed3582a", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001148" - }, - { - "pred": "http://purl.obolibrary.org/obo/RO_0002175", - "val": "http://purl.obolibrary.org/obo/NCBITaxon_9606" - }, - { - "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Oligo_4" - } - ], - "comments": [ - "A Oligo_4 in the Human Brain has the gene markers OPALIN, TRIM59, CERCAM with a NS-Forest FBeta value of 0.5434782608695652s." - ] - }, - "type": "INDIVIDUAL" - }, - { - "id": "http://example.org/6faa9fa7-e27d-4757-a275-07792ff7d143", - "meta": { - "basicPropertyValues": [ - { - "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001176" - }, - { - "pred": "http://purl.obolibrary.org/obo/RO_0002175", - "val": "http://purl.obolibrary.org/obo/NCBITaxon_9606" - }, - { - "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst_6" - } - ], - "comments": [ - "A Sst_6 in the Human Brain has the gene markers DPP4, MAFB with a NS-Forest FBeta value of 0.38520801232665647s." - ] - }, - "type": "INDIVIDUAL" - }, - { - "id": "http://example.org/701a1c10-768d-4d50-8586-b52df10a4978", - "meta": { - "basicPropertyValues": [ - { - "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001171" - }, - { - "pred": "http://purl.obolibrary.org/obo/RO_0002175", - "val": "http://purl.obolibrary.org/obo/NCBITaxon_9606" - }, - { - "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst_1" - } - ], - "comments": [ - "A Sst_1 in the Human Brain has the gene markers NDST4, ANGPT1, EPB41L4A with a NS-Forest FBeta value of 0.5104166666666666s." - ] - }, - "type": "INDIVIDUAL" - }, - { - "id": "http://example.org/70921b59-1c01-47bc-a0a4-693fa1836939", - "meta": { - "basicPropertyValues": [ - { - "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001184" - }, - { - "pred": "http://purl.obolibrary.org/obo/RO_0002175", - "val": "http://purl.obolibrary.org/obo/NCBITaxon_9606" - }, - { - "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst_14" - } - ], - "comments": [ - "A Sst_14 in the Human Brain has the gene markers SLC9A2, ROR1, EYA4 with a NS-Forest FBeta value of 0.46314741035856577s." - ] - }, - "type": "INDIVIDUAL" - }, - { - "id": "http://example.org/70ed5917-b199-4ec2-a386-f224ebabd84f", - "meta": { - "basicPropertyValues": [ - { - "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000083" - }, - { - "pred": "http://purl.obolibrary.org/obo/RO_0002175", - "val": "http://purl.obolibrary.org/obo/NCBITaxon_9606" - }, - { - "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst Chodl" - } - ], - "comments": [ - "A Sst Chodl in the Human Brain has the gene markers NPY with a NS-Forest FBeta value of 0.894026187s." - ] - }, - "type": "INDIVIDUAL" - }, - { - "id": "http://example.org/722cbf7f-40b8-4709-a9a3-bbc70c39af1a", - "meta": { - "basicPropertyValues": [ - { - "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001213" - }, - { - "pred": "http://purl.obolibrary.org/obo/RO_0002175", - "val": "http://purl.obolibrary.org/obo/NCBITaxon_9606" - }, - { - "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Vip_4" - } - ], - "comments": [ - "A Vip_4 in the Human Brain has the gene markers WNT5A, ABI3BP, VCAN with a NS-Forest FBeta value of 0.546875s." - ] - }, - "type": "INDIVIDUAL" - }, - { - "id": "http://example.org/72874686-99a5-4040-b224-388e67289791", - "meta": { - "basicPropertyValues": [ - { - "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001158" - }, - { - "pred": "http://purl.obolibrary.org/obo/RO_0002175", - "val": "http://purl.obolibrary.org/obo/NCBITaxon_9606" - }, - { - "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Pvalb_6" - } - ], - "comments": [ - "A Pvalb_6 in the Human Brain has the gene markers POSTN, SULF1, CEMIP, RNF144B with a NS-Forest FBeta value of 0.29255319148936176s." - ] - }, - "type": "INDIVIDUAL" - }, - { - "id": "http://example.org/72a732fb-ae22-483b-a301-cb17cc0e1b45", - "meta": { - "basicPropertyValues": [ - { - "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001211" - }, - { - "pred": "http://purl.obolibrary.org/obo/RO_0002175", - "val": "http://purl.obolibrary.org/obo/NCBITaxon_9606" - }, - { - "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Vip_2" - } - ], - "comments": [ - "A Vip_2 in the Human Brain has the gene markers IGFBP5, SLC22A3, PTGDS, VIP with a NS-Forest FBeta value of 0.4741379310344827s." - ] - }, - "type": "INDIVIDUAL" - }, - { - "id": "http://example.org/72d78f3c-2ddd-4fc1-8038-fadc6e4191dd", - "meta": { - "basicPropertyValues": [ - { - "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000076" - }, - { - "pred": "http://purl.obolibrary.org/obo/RO_0002175", - "val": "http://purl.obolibrary.org/obo/NCBITaxon_9606" - }, - { - "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Micro/PVM" - } - ], - "comments": [ - "A Micro/PVM in the Human Brain has the gene markers APBB1IP, DOCK8 with a NS-Forest FBeta value of 0.955105634s." - ] - }, - "type": "INDIVIDUAL" - }, - { - "id": "http://example.org/7410b553-9cc8-4705-a276-9a391724dac9", - "meta": { - "basicPropertyValues": [ - { - "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001214" - }, - { - "pred": "http://purl.obolibrary.org/obo/RO_0002175", - "val": "http://purl.obolibrary.org/obo/NCBITaxon_9606" - }, - { - "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Vip_5" - } - ], - "comments": [ - "A Vip_5 in the Human Brain has the gene markers LINC01630, IQGAP2, THSD4 with a NS-Forest FBeta value of 0.4801324503311257s." - ] - }, - "type": "INDIVIDUAL" - }, - { - "id": "http://example.org/74f97cdc-646e-4706-89fd-5e03b92a2aaf", - "meta": { - "basicPropertyValues": [ - { - "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001236" - }, - { - "pred": "http://purl.obolibrary.org/obo/RO_0002175", - "val": "http://purl.obolibrary.org/obo/NCBITaxon_9606" - }, - { - "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Vip_27" - } - ], - "comments": [ - "A Vip_27 in the Human Brain has the gene markers DACH2, CHRNA7, MIR4500HG, VIP with a NS-Forest FBeta value of 0.5466778805719091s." - ] - }, - "type": "INDIVIDUAL" - }, - { - "id": "http://example.org/751b3710-48de-48ba-b111-5d2aee6dfdb2", - "meta": { - "basicPropertyValues": [ - { - "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001152" - }, - { - "pred": "http://purl.obolibrary.org/obo/RO_0002175", - "val": "http://purl.obolibrary.org/obo/NCBITaxon_9606" - }, - { - "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Pax6_4" - } - ], - "comments": [ - "A Pax6_4 in the Human Brain has the gene markers PALMD, RELN with a NS-Forest FBeta value of 0.8731422505307855s." - ] - }, - "type": "INDIVIDUAL" - }, - { - "id": "http://example.org/75219c79-070e-4db7-9d97-3b66dfba075d", - "meta": { - "basicPropertyValues": [ - { - "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000046" + "val": "http://purl.obolibrary.org/obo/CLM_1001183" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -787663,22 +787548,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Peribronchial fibroblasts" + "val": "Sst_13" } ], "comments": [ - "A Peribronchial fibroblasts in the Human Lung has the gene markers DPT, APOD with a NS-Forest FBeta value of 0.58s." + "A Sst_13 in the Human Brain has the gene markers FBN2, TRPC6, EPB41L4A with a NS-Forest FBeta value of 0.5461876832844575s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/75a87b58-7db5-4cc1-8dcb-144afd9d4b85", + "id": "http://example.org/71d904fd-f2d3-5066-bb13-a99fd02ce07e", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000078" + "val": "http://purl.obolibrary.org/obo/CLM_1001117" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -787686,22 +787571,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Oligo" + "val": "L5/6 NP_2" } ], "comments": [ - "A Oligo in the Human Brain has the gene markers ST18, PLP1 with a NS-Forest FBeta value of 0.97185637s." + "A L5/6 NP_2 in the Human Brain has the gene markers SLC17A6, CRYM with a NS-Forest FBeta value of 0.4607508532423208s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/75c50a24-2bf1-40ad-b88b-89db61c291f6", + "id": "http://example.org/72700095-dab0-5b58-894c-97a7a65b8963", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001140" + "val": "http://purl.obolibrary.org/obo/CLM_1001224" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -787709,22 +787594,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Lamp5_5" + "val": "Vip_15" } ], "comments": [ - "A Lamp5_5 in the Human Brain has the gene markers NDNF, NPNT, LAMP5 with a NS-Forest FBeta value of 0.6249999999999999s." + "A Vip_15 in the Human Brain has the gene markers SVIL, VIP with a NS-Forest FBeta value of 0.6172360248447205s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/761ac72c-caed-4bd9-aec7-275e9f6ca152", + "id": "http://example.org/75d61169-6e4a-5397-93c0-bcad3cc06500", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000011" + "val": "http://purl.obolibrary.org/obo/CLM_1001100" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -787732,22 +787617,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "B cells" + "val": "L4 IT_1" } ], "comments": [ - "A B cells in the Human Lung has the gene markers MS4A1, CD79A with a NS-Forest FBeta value of 0.86s." + "A L4 IT_1 in the Human Brain has the gene markers TPBG, RP11-197K6.1, ST8SIA4 with a NS-Forest FBeta value of 0.6129032258064517s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/76fc7b4b-3f50-45ef-b810-fd6d7e1801ab", + "id": "http://example.org/76d9674d-944d-50dc-bbcc-1b22a543b0aa", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001222" + "val": "http://purl.obolibrary.org/obo/CLM_1001220" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -787755,22 +787640,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Vip_13" + "val": "Vip_11" } ], "comments": [ - "A Vip_13 in the Human Brain has the gene markers ST18, PTGDS, VIP with a NS-Forest FBeta value of 0.42776639344262285s." + "A Vip_11 in the Human Brain has the gene markers ABI3BP, MCTP2, SLC22A3, PROS1 with a NS-Forest FBeta value of 0.43523676880222845s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/7716ea6e-9ae4-4960-ab8f-f080e0fbbed9", + "id": "http://example.org/7772db65-7667-5c09-9895-12790af6d02a", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001210" + "val": "http://purl.obolibrary.org/obo/CLM_1001092" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -787778,22 +787663,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Vip_1" + "val": "Endo_1" } ], "comments": [ - "A Vip_1 in the Human Brain has the gene markers FLT1, LRRC1, SHISA8 with a NS-Forest FBeta value of 0.400763358778626s." + "A Endo_1 in the Human Brain has the gene markers COLEC12, VWF, FLT1, ABCG2 with a NS-Forest FBeta value of 0.831353919239905s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/77b6c96e-bbab-41e4-a1a7-b3f711aabbb4", + "id": "http://example.org/777ac0fb-91c3-539f-8ab0-f8aba500e975", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000074" + "val": "http://purl.obolibrary.org/obo/CLM_1001223" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -787801,22 +787686,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Lamp5" + "val": "Vip_14" } ], "comments": [ - "A Lamp5 in the Human Brain has the gene markers LINC00298, KIT with a NS-Forest FBeta value of 0.814687838s." + "A Vip_14 in the Human Brain has the gene markers ST18, KCNH8, CA10, VIP with a NS-Forest FBeta value of 0.5968468468468467s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/794f6b2b-326c-4633-a172-20d36702c4fe", + "id": "http://example.org/77c19f58-4076-5447-99c6-5e0290bca684", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000074" + "val": "http://purl.obolibrary.org/obo/CLM_1001213" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -787824,22 +787709,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Lamp5" + "val": "Vip_4" } ], "comments": [ - "A Lamp5 in the Human Brain has the gene markers LINC00298, KIT with a NS-Forest FBeta value of 0.814687838s." + "A Vip_4 in the Human Brain has the gene markers WNT5A, ABI3BP, VCAN with a NS-Forest FBeta value of 0.546875s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/7a138515-4560-44d8-8237-e9d231725c20", + "id": "http://example.org/780dcde0-335f-59e0-8104-af9be12a4ab6", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001124" + "val": "http://purl.obolibrary.org/obo/CLM_1001147" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -787847,22 +787732,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "L6 CT_3" + "val": "Oligo_3" } ], "comments": [ - "A L6 CT_3 in the Human Brain has the gene markers SULF1, MEIS2, ADAMTSL1, KCNH5 with a NS-Forest FBeta value of 0.632267441860465s." + "A Oligo_3 in the Human Brain has the gene markers OPALIN, LINC01170 with a NS-Forest FBeta value of 0.713610586011342s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/7a54700f-f9aa-424f-af3d-75fcccb4309e", + "id": "http://example.org/797f9d9e-d706-59b9-bccc-ecd1dc1f2c6d", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000052" + "val": "http://purl.obolibrary.org/obo/CLM_1001193" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -787870,17 +787755,17 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "SMG duct" + "val": "Sst_23" } ], "comments": [ - "A SMG duct in the Human Lung has the gene markers GLYATL2, DMBT1 with a NS-Forest FBeta value of 0.46s." + "A Sst_23 in the Human Brain has the gene markers NIBAN1, PROM1, THSD7B with a NS-Forest FBeta value of 0.6134686346863469s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/7cc86d0d-56c1-4d77-8b57-34792b97cc0f", + "id": "http://example.org/7993342c-f5a1-5ad5-91c4-2a945c5d3742", "meta": { "basicPropertyValues": [ { @@ -787903,35 +787788,12 @@ "type": "INDIVIDUAL" }, { - "id": "http://example.org/7ce33e68-4880-42a0-9cd3-e14ae536c590", + "id": "http://example.org/79987796-35a9-594c-a55b-53eb2cf3cb89", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000030" - }, - { - "pred": "http://purl.obolibrary.org/obo/RO_0002175", - "val": "http://purl.obolibrary.org/obo/NCBITaxon_9606" - }, - { - "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Hillock-like" - } - ], - "comments": [ - "A Hillock-like in the Human Lung has the gene markers KRT14, KRT6A with a NS-Forest FBeta value of 0.66s." - ] - }, - "type": "INDIVIDUAL" - }, - { - "id": "http://example.org/7f19c09a-3c32-4642-aef9-f213e031e0fd", - "meta": { - "basicPropertyValues": [ - { - "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000048" + "val": "http://purl.obolibrary.org/obo/CLM_1001189" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -787939,22 +787801,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Plasma cells" + "val": "Sst_19" } ], "comments": [ - "A Plasma cells in the Human Lung has the gene markers JCHAIN with a NS-Forest FBeta value of 0.91s." + "A Sst_19 in the Human Brain has the gene markers EPB41L4A, GPC5, PLCH1 with a NS-Forest FBeta value of 0.7339449541284404s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/7f9b0f4d-4dc1-4ecc-ab44-0c55c19c140a", + "id": "http://example.org/7a04939b-d8a5-5aac-a085-3239e836c862", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001147" + "val": "http://purl.obolibrary.org/obo/CLM_1000075" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -787962,22 +787824,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Oligo_3" + "val": "Lamp5 Lhx6" } ], "comments": [ - "A Oligo_3 in the Human Brain has the gene markers OPALIN, LINC01170 with a NS-Forest FBeta value of 0.713610586011342s." + "A Lamp5 Lhx6 in the Human Brain has the gene markers CHST9, LAMP5 with a NS-Forest FBeta value of 0.821678322s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/80e52ac5-90dd-4ce3-9638-9ecf8e7b1539", + "id": "http://example.org/7a4595fe-e4c4-5660-be4c-99a12504917b", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001205" + "val": "http://purl.obolibrary.org/obo/CLM_1000076" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -787985,22 +787847,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst_35" + "val": "Micro/PVM" } ], "comments": [ - "A Sst_35 in the Human Brain has the gene markers ACVR1C, EYA2, TRIM67 with a NS-Forest FBeta value of 0.5226480836236933s." + "A Micro/PVM in the Human Brain has the gene markers APBB1IP, DOCK8 with a NS-Forest FBeta value of 0.955105634s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/81a13212-6bc5-419e-9871-1592d73df781", + "id": "http://example.org/7a59e428-c910-56f6-8203-80543e9edf59", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000056" + "val": "http://purl.obolibrary.org/obo/CLM_1001185" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -788008,22 +787870,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Smooth muscle" + "val": "Sst_15" } ], "comments": [ - "A Smooth muscle in the Human Lung has the gene markers ACTA2, TAGLN with a NS-Forest FBeta value of 0.69s." + "A Sst_15 in the Human Brain has the gene markers DPP4, EPB41L4A, FREM1, PLCH1 with a NS-Forest FBeta value of 0.45995670995671s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/81de57dc-65f5-4014-a757-432a74d25c58", + "id": "http://example.org/7b911472-5ec7-52e1-9c8a-3f889daddaff", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000016" + "val": "http://purl.obolibrary.org/obo/CLM_1001236" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -788031,22 +787893,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Club (nasal)" + "val": "Vip_27" } ], "comments": [ - "A Club (nasal) in the Human Lung has the gene markers TFCP2L1, PSCA with a NS-Forest FBeta value of 0.43s." + "A Vip_27 in the Human Brain has the gene markers DACH2, CHRNA7, MIR4500HG, VIP with a NS-Forest FBeta value of 0.5466778805719091s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/82711ec2-43f3-4894-a00c-b8d17826bc81", + "id": "http://example.org/7cb09d6e-019d-5eea-bee7-d9f71336fd59", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001215" + "val": "http://purl.obolibrary.org/obo/CLM_1001150" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -788054,22 +787916,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Vip_6" + "val": "Pax6_2" } ], "comments": [ - "A Vip_6 in the Human Brain has the gene markers SMOC1, IQGAP2, PARD3B with a NS-Forest FBeta value of 0.5082179930795848s." + "A Pax6_2 in the Human Brain has the gene markers TGFBR2, BCHE, RELN with a NS-Forest FBeta value of 0.7676056338028169s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/82ab9563-45ec-49e1-a862-75f58c66c005", + "id": "http://example.org/7d1acf27-32b8-59e8-897c-4430648680b5", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000040" + "val": "http://purl.obolibrary.org/obo/CLM_1001201" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -788077,22 +787939,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Multiciliated (nasal)" + "val": "Sst_31" } ], "comments": [ - "A Multiciliated (nasal) in the Human Lung has the gene markers FMO3, MRLN, OMG with a NS-Forest FBeta value of 0.59s." + "A Sst_31 in the Human Brain has the gene markers FRZB, CBLN4, RGS5_ENSG00000143248, ARHGAP10 with a NS-Forest FBeta value of 0.4743083003952569s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/82ac6dd7-1d50-43f4-b058-a83028ba41c7", + "id": "http://example.org/7e108f73-253d-5ab2-a065-876d5de092ac", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001212" + "val": "http://purl.obolibrary.org/obo/CLM_1001235" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -788100,22 +787962,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Vip_3" + "val": "Vip_26" } ], "comments": [ - "A Vip_3 in the Human Brain has the gene markers HPSE2, TRPC6, VIP with a NS-Forest FBeta value of 0.40249999999999997s." + "A Vip_26 in the Human Brain has the gene markers SEMA3C, LINC01630, HPSE2, TAC3 with a NS-Forest FBeta value of 0.5947955390334573s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/83088ff0-4f05-4506-9f89-476f36907eee", + "id": "http://example.org/7e12ff9d-57ac-5b39-927d-7aa87fa6abf3", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001173" + "val": "http://purl.obolibrary.org/obo/CLM_1001191" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -788123,22 +787985,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst_3" + "val": "Sst_21" } ], "comments": [ - "A Sst_3 in the Human Brain has the gene markers TCF7L1, FBXL7, CBLN2 with a NS-Forest FBeta value of 0.6936997319034853s." + "A Sst_21 in the Human Brain has the gene markers ANGPT1, FBN2, COL24A1 with a NS-Forest FBeta value of 0.48315602836879434s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/869ac50b-cafc-4d75-88ad-398595b34d83", + "id": "http://example.org/80b0265f-4383-55ac-9c1d-73b35f00741e", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001086" + "val": "http://purl.obolibrary.org/obo/CLM_1001217" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -788146,22 +788008,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Astro_1" + "val": "Vip_8" } ], "comments": [ - "A Astro_1 in the Human Brain has the gene markers SLC1A3, HPSE2 with a NS-Forest FBeta value of 0.6796875s." + "A Vip_8 in the Human Brain has the gene markers VWDE, WSCD1, DACH2 with a NS-Forest FBeta value of 0.3183962264150943s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/872bc20b-c59d-40eb-a258-f2e016896387", + "id": "http://example.org/80c0a03d-2a1a-5f6b-8e19-e2697783fe9d", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000070" + "val": "http://purl.obolibrary.org/obo/CLM_1001197" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -788169,17 +788031,17 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "L6 CT" + "val": "Sst_27" } ], "comments": [ - "A L6 CT in the Human Brain has the gene markers SEMA5B, ADAMTSL1, SULF1 with a NS-Forest FBeta value of 0.631898455s." + "A Sst_27 in the Human Brain has the gene markers EDNRA, MT-ND5, FREM1, SST with a NS-Forest FBeta value of 0.39168937329700276s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/88a96e50-9748-43ed-8556-11671d3f62d0", + "id": "http://example.org/815933f9-fbec-5177-8963-c58279eaffc8", "meta": { "basicPropertyValues": [ { @@ -788202,12 +788064,12 @@ "type": "INDIVIDUAL" }, { - "id": "http://example.org/88eeea7e-ca35-410b-a967-31bc49eccb89", + "id": "http://example.org/8246e8bf-019e-593b-8988-faee4f9d6a66", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001120" + "val": "http://purl.obolibrary.org/obo/CLM_1001149" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -788215,22 +788077,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "L5/6 NP_5" + "val": "Pax6_1" } ], "comments": [ - "A L5/6 NP_5 in the Human Brain has the gene markers COL9A1, NPSR1, TLL1 with a NS-Forest FBeta value of 0.5373831775700935s." + "A Pax6_1 in the Human Brain has the gene markers IGFBP7, EPS8, HCRTR2 with a NS-Forest FBeta value of 0.767426273458445s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/8906bcc7-65c7-4064-89a4-d6ebc4c36df1", + "id": "http://example.org/8273be13-f220-5f5c-bfa4-1760b66133f6", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001165" + "val": "http://purl.obolibrary.org/obo/CLM_1001161" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -788238,22 +788100,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sncg_4" + "val": "Pvalb_9" } ], "comments": [ - "A Sncg_4 in the Human Brain has the gene markers LINC01539, DCN, THSD7B with a NS-Forest FBeta value of 0.6752411575562701s." + "A Pvalb_9 in the Human Brain has the gene markers PVALB, POSTN with a NS-Forest FBeta value of 0.5845323741007195s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/899a0cfc-c01e-402e-aabf-18929b3370a5", + "id": "http://example.org/83076678-c74e-5665-86fb-1f738129ca45", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001176" + "val": "http://purl.obolibrary.org/obo/CLM_1001099" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -788261,22 +788123,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst_6" + "val": "L2/3 IT_6" } ], "comments": [ - "A Sst_6 in the Human Brain has the gene markers DPP4, MAFB with a NS-Forest FBeta value of 0.38520801232665647s." + "A L2/3 IT_6 in the Human Brain has the gene markers LINC00507, ADAMTS3, LY86-AS1 with a NS-Forest FBeta value of 0.5509868421052632s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/8a16650e-17c2-4f1b-9fee-d4c04e542478", + "id": "http://example.org/83659dfd-6c91-5325-9146-3a6162f87688", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001145" + "val": "http://purl.obolibrary.org/obo/CLM_1001181" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -788284,22 +788146,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Oligo_1" + "val": "Sst_11" } ], "comments": [ - "A Oligo_1 in the Human Brain has the gene markers CERCAM, DOCK5 with a NS-Forest FBeta value of 0.24613623354321695s." + "A Sst_11 in the Human Brain has the gene markers ADGRG6, PROM1, SYT9 with a NS-Forest FBeta value of 0.34898477157360397s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/8a9e959e-ffd1-47d0-9008-a0cd7207c056", + "id": "http://example.org/844bd41e-812b-5378-b4d6-6ef6fe40c0d3", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001129" + "val": "http://purl.obolibrary.org/obo/CLM_1001163" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -788307,22 +788169,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "L6b_1" + "val": "Sncg_2" } ], "comments": [ - "A L6b_1 in the Human Brain has the gene markers SEMA3D, ITGA11, FAM160A1 with a NS-Forest FBeta value of 0.5724637681159421s." + "A Sncg_2 in the Human Brain has the gene markers FOXO1, CA10, PRELID2, THSD7B with a NS-Forest FBeta value of 0.7396788990825688s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/8b287903-a06f-403c-aa36-ac717fdabfe2", + "id": "http://example.org/852bf5b0-70c7-5de4-92a3-aeca178e0c90", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001124" + "val": "http://purl.obolibrary.org/obo/CLM_1001101" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -788330,22 +788192,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "L6 CT_3" + "val": "L4 IT_2" } ], "comments": [ - "A L6 CT_3 in the Human Brain has the gene markers SULF1, MEIS2, ADAMTSL1, KCNH5 with a NS-Forest FBeta value of 0.632267441860465s." + "A L4 IT_2 in the Human Brain has the gene markers C6orf141, ST8SIA4 with a NS-Forest FBeta value of 0.7738095238095238s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/8bc44c96-d456-44f3-96b4-887e711012bd", + "id": "http://example.org/8577fcc8-5cc5-5f56-b51f-352b04c39651", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001159" + "val": "http://purl.obolibrary.org/obo/CLM_1001208" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -788353,22 +788215,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Pvalb_7" + "val": "VLMC_1" } ], "comments": [ - "A Pvalb_7 in the Human Brain has the gene markers SULF1, ZNF385D-AS2 with a NS-Forest FBeta value of 0.5650087260034904s." + "A VLMC_1 in the Human Brain has the gene markers TAGLN, ACTA2 with a NS-Forest FBeta value of 0.8559498956158662s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/8c75d9b8-1e9e-4374-b798-5fd1da561b2b", + "id": "http://example.org/85ae9809-473f-5b1a-aa06-3783cd8e03a5", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001161" + "val": "http://purl.obolibrary.org/obo/CLM_1001233" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -788376,22 +788238,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Pvalb_9" + "val": "Vip_24" } ], "comments": [ - "A Pvalb_9 in the Human Brain has the gene markers PVALB, POSTN with a NS-Forest FBeta value of 0.5845323741007195s." + "A Vip_24 in the Human Brain has the gene markers LYPD1, ENHO, CHRNA2 with a NS-Forest FBeta value of 0.36276223776223776s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/8cef1166-94a5-4ef6-b92a-0eb75a1078c7", + "id": "http://example.org/85b7e478-4529-5648-8a50-7662177cfa41", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000047" + "val": "http://purl.obolibrary.org/obo/CLM_1001169" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -788399,22 +788261,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Pericytes" + "val": "Sncg_8" } ], "comments": [ - "A Pericytes in the Human Lung has the gene markers HIGD1B, KCNK3 with a NS-Forest FBeta value of 0.84s." + "A Sncg_8 in the Human Brain has the gene markers NDST4, HTR2C, PRELID2 with a NS-Forest FBeta value of 0.49476135040745045s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/8d8bfb96-a128-471d-84d8-0afa5a21c6d2", + "id": "http://example.org/85fc0c94-39b3-564f-ae43-008a48f3b870", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001157" + "val": "http://purl.obolibrary.org/obo/CLM_1001173" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -788422,22 +788284,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Pvalb_5" + "val": "Sst_3" } ], "comments": [ - "A Pvalb_5 in the Human Brain has the gene markers SNTB1, COBLL1, GPR149, TAC1 with a NS-Forest FBeta value of 0.6364329268292682s." + "A Sst_3 in the Human Brain has the gene markers TCF7L1, FBXL7, CBLN2 with a NS-Forest FBeta value of 0.6936997319034853s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/8deff728-c5c4-4fc3-bad3-8611f3fde461", + "id": "http://example.org/864f1d2c-d0a4-54c4-b582-429ab072f250", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000055" + "val": "http://purl.obolibrary.org/obo/CLM_1001107" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -788445,22 +788307,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "SMG serous (nasal)" + "val": "L5 ET_2" } ], "comments": [ - "A SMG serous (nasal) in the Human Lung has the gene markers STATH with a NS-Forest FBeta value of 0.92s." + "A L5 ET_2 in the Human Brain has the gene markers ATP6V1C2, LRP2, ST8SIA2 with a NS-Forest FBeta value of 0.7593749999999999s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/8e85bfaa-5338-4ecf-b79e-5c3410ba8872", + "id": "http://example.org/868849a6-fdd7-5d12-b418-ab6fbac00182", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001116" + "val": "http://purl.obolibrary.org/obo/CLM_1001160" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -788468,22 +788330,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "L5/6 NP_1" + "val": "Pvalb_8" } ], "comments": [ - "A L5/6 NP_1 in the Human Brain has the gene markers BARX2, CD36, NPSR1-AS1 with a NS-Forest FBeta value of 0.49025974025974034s." + "A Pvalb_8 in the Human Brain has the gene markers CA8, FGFR2, TAC1 with a NS-Forest FBeta value of 0.5676733780760627s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/8f491902-82c4-482c-bc39-891b804084fa", + "id": "http://example.org/86c7ec43-72ff-59f4-ac18-fa41ae2ec2aa", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001167" + "val": "http://purl.obolibrary.org/obo/CLM_1001207" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -788491,22 +788353,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sncg_6" + "val": "Sst_37" } ], "comments": [ - "A Sncg_6 in the Human Brain has the gene markers THSD7B, ADAMTSL1, RELN with a NS-Forest FBeta value of 0.5738434163701067s." + "A Sst_37 in the Human Brain has the gene markers PROM1, CRHBP, SST with a NS-Forest FBeta value of 0.5s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/90dca348-a404-43fc-8a48-1f24a7700056", + "id": "http://example.org/87809caf-8c18-5bb3-8b36-22c761abe966", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001089" + "val": "http://purl.obolibrary.org/obo/CLM_1000079" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -788514,22 +788376,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Astro_4" + "val": "Pax6" } ], "comments": [ - "A Astro_4 in the Human Brain has the gene markers PPP1R3C, ETNPPL, ID4, OBI1-AS1 with a NS-Forest FBeta value of 0.47279792746113986s." + "A Pax6 in the Human Brain has the gene markers RELN, HCRTR2 with a NS-Forest FBeta value of 0.724125093s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/9129d96f-8103-4bd0-b2f4-42d2548f59cb", + "id": "http://example.org/87c7a4ec-f900-5e45-90e0-20f36a4de3d0", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001219" + "val": "http://purl.obolibrary.org/obo/CLM_1000063" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -788537,22 +788399,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Vip_10" + "val": "Chandelier" } ], "comments": [ - "A Vip_10 in the Human Brain has the gene markers ABI3BP, KCNG2, PARD3B with a NS-Forest FBeta value of 0.5405405405405405s." + "A Chandelier in the Human Brain has the gene markers GPR149, CA8 with a NS-Forest FBeta value of 0.799748111s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/91c4361f-dcee-4702-8c6e-9e81a7d9bf1b", + "id": "http://example.org/87cc1b82-7ec4-5a9d-98b9-203eededbd63", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001131" + "val": "http://purl.obolibrary.org/obo/CLM_1001134" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -788560,22 +788422,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "L6b_3" + "val": "L6b_6" } ], "comments": [ - "A L6b_3 in the Human Brain has the gene markers SLC15A5, ATP10A with a NS-Forest FBeta value of 0.6928969359331476s." + "A L6b_6 in the Human Brain has the gene markers PCOLCE2, FAM160A1, SULF1 with a NS-Forest FBeta value of 0.570388349514563s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/9204cd8b-078d-4693-9bd1-7994e97c2a63", + "id": "http://example.org/87f3616a-6eaf-566a-9416-8df02a938582", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001204" + "val": "http://purl.obolibrary.org/obo/CLM_1001119" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -788583,22 +788445,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst_34" + "val": "L5/6 NP_4" } ], "comments": [ - "A Sst_34 in the Human Brain has the gene markers TTC29, TCF7L1 with a NS-Forest FBeta value of 0.565749235474006s." + "A L5/6 NP_4 in the Human Brain has the gene markers FSHR, CLMN, TLL1 with a NS-Forest FBeta value of 0.740632318501171s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/920d8f23-d2b5-446b-bc25-b21dfddc1859", + "id": "http://example.org/889d386a-f955-5d07-a815-783e726f9b89", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001206" + "val": "http://purl.obolibrary.org/obo/CLM_1001134" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -788606,22 +788468,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst_36" + "val": "L6b_6" } ], "comments": [ - "A Sst_36 in the Human Brain has the gene markers TRDN, ITGA1, PARD3B, PLCH1 with a NS-Forest FBeta value of 0.6381381381381382s." + "A L6b_6 in the Human Brain has the gene markers PCOLCE2, FAM160A1, SULF1 with a NS-Forest FBeta value of 0.570388349514563s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/92c25169-b510-4bfd-b4ef-7fba9f3ffe39", + "id": "http://example.org/893130a9-4a8b-52ab-81f8-ca2393291bc3", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001192" + "val": "http://purl.obolibrary.org/obo/CLM_1000064" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -788629,22 +788491,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst_22" + "val": "Endo" } ], "comments": [ - "A Sst_22 in the Human Brain has the gene markers EPB41L4A, ITGA8, SST with a NS-Forest FBeta value of 0.4351032448377581s." + "A Endo in the Human Brain has the gene markers FLT1, ABCG2 with a NS-Forest FBeta value of 0.923892465s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/9327815f-41e4-4b26-b08c-3ceea7b093e3", + "id": "http://example.org/897959f7-3a0c-5181-918f-ee4873b477d8", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001193" + "val": "http://purl.obolibrary.org/obo/CLM_1001154" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -788652,22 +788514,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst_23" + "val": "Pvalb_2" } ], "comments": [ - "A Sst_23 in the Human Brain has the gene markers NIBAN1, PROM1, THSD7B with a NS-Forest FBeta value of 0.6134686346863469s." + "A Pvalb_2 in the Human Brain has the gene markers BCHE, SEMA3C, GPC5 with a NS-Forest FBeta value of 0.7717391304347827s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/934f40e4-efea-4297-a90e-700413174d69", + "id": "http://example.org/8a2425e6-0de6-5e85-a1f6-dc0f6c10d913", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001186" + "val": "http://purl.obolibrary.org/obo/CLM_1001089" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -788675,22 +788537,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst_16" + "val": "Astro_4" } ], "comments": [ - "A Sst_16 in the Human Brain has the gene markers LINC01630, DACH1, VAV3 with a NS-Forest FBeta value of 0.6000000000000001s." + "A Astro_4 in the Human Brain has the gene markers PPP1R3C, ETNPPL, ID4, OBI1-AS1 with a NS-Forest FBeta value of 0.47279792746113986s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/94cf90e9-faf1-4b67-b645-ed77a61b26c2", + "id": "http://example.org/8b343b2d-58d7-510e-b8f0-242f0b95dd1d", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000081" + "val": "http://purl.obolibrary.org/obo/CLM_1001178" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -788698,22 +788560,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sncg" + "val": "Sst_8" } ], "comments": [ - "A Sncg in the Human Brain has the gene markers RXRG, THSD7B with a NS-Forest FBeta value of 0.628943702s." + "A Sst_8 in the Human Brain has the gene markers STK32A, SYT9, RELN with a NS-Forest FBeta value of 0.5061619718309859s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/94f43b81-defa-4429-9fba-f3ad92744a2c", + "id": "http://example.org/8b450dd8-cead-58b4-ba96-8ae2466b9d3a", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000076" + "val": "http://purl.obolibrary.org/obo/CLM_1001108" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -788721,22 +788583,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Micro/PVM" + "val": "L5 ET_3" } ], "comments": [ - "A Micro/PVM in the Human Brain has the gene markers APBB1IP, DOCK8 with a NS-Forest FBeta value of 0.955105634s." + "A L5 ET_3 in the Human Brain has the gene markers ONECUT1, TTC6, SEMA3D, FAM189A2 with a NS-Forest FBeta value of 0.8891454965357967s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/9523c901-d5b5-4e51-9079-073bda62f64c", + "id": "http://example.org/8c0dd46d-e667-5962-919a-cc304e2b20a0", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001238" + "val": "http://purl.obolibrary.org/obo/CLM_1001145" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -788744,22 +788606,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Vip_29" + "val": "Oligo_1" } ], "comments": [ - "A Vip_29 in the Human Brain has the gene markers IQGAP2, KCNJ2, TAC1, MYO5B, VIP with a NS-Forest FBeta value of 0.49180327868852464s." + "A Oligo_1 in the Human Brain has the gene markers CERCAM, DOCK5 with a NS-Forest FBeta value of 0.24613623354321695s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/95488329-c1bd-4fe8-9c58-429cdcea4e56", + "id": "http://example.org/8d277d2e-c58d-500c-9cfb-e4f109aaafe5", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001150" + "val": "http://purl.obolibrary.org/obo/CLM_1001152" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -788767,22 +788629,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Pax6_2" + "val": "Pax6_4" } ], "comments": [ - "A Pax6_2 in the Human Brain has the gene markers TGFBR2, BCHE, RELN with a NS-Forest FBeta value of 0.7676056338028169s." + "A Pax6_4 in the Human Brain has the gene markers PALMD, RELN with a NS-Forest FBeta value of 0.8731422505307855s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/957c8c4b-1ace-4f72-b33a-3885a05d53fc", + "id": "http://example.org/8e12490d-1b11-5355-8f62-826630f11024", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001219" + "val": "http://purl.obolibrary.org/obo/CLM_1001204" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -788790,22 +788652,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Vip_10" + "val": "Sst_34" } ], "comments": [ - "A Vip_10 in the Human Brain has the gene markers ABI3BP, KCNG2, PARD3B with a NS-Forest FBeta value of 0.5405405405405405s." + "A Sst_34 in the Human Brain has the gene markers TTC29, TCF7L1 with a NS-Forest FBeta value of 0.565749235474006s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/95a98198-08d8-4800-8eaf-afc4a0475cae", + "id": "http://example.org/8e3f84eb-0476-5d23-bcac-d17088fe8131", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000009" + "val": "http://purl.obolibrary.org/obo/CLM_1001216" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -788813,22 +788675,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "AT2" + "val": "Vip_7" } ], "comments": [ - "A AT2 in the Human Lung has the gene markers SFTPA1 with a NS-Forest FBeta value of 0.95s." + "A Vip_7 in the Human Brain has the gene markers CCN2, PCDH18, SEMA3C, HPSE2 with a NS-Forest FBeta value of 0.40059347181008903s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/9622e78f-f55c-410c-8cee-669bc8bad04b", + "id": "http://example.org/8f871e7a-db10-53b4-8f87-f257bf972cec", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001151" + "val": "http://purl.obolibrary.org/obo/CLM_1001142" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -788836,22 +788698,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Pax6_3" + "val": "Lamp5_7" } ], "comments": [ - "A Pax6_3 in the Human Brain has the gene markers PBX3, PDLIM5, FBN2 with a NS-Forest FBeta value of 0.7090163934426228s." + "A Lamp5_7 in the Human Brain has the gene markers MYH11, MT-ND4L, KIT with a NS-Forest FBeta value of 0.42241379310344834s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/97082fa7-8eeb-4bdb-9b3a-d50e693ee1dc", + "id": "http://example.org/8f965f2a-b73f-5ebb-a3a0-5b56d2127ba9", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000007" + "val": "http://purl.obolibrary.org/obo/CLM_1001113" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -788859,17 +788721,17 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "AT0" + "val": "L5 IT_4" } ], "comments": [ - "A AT0 in the Human Lung has the gene markers HSD17B6, XIST, SCGB3A2 with a NS-Forest FBeta value of 0.28s." + "A L5 IT_4 in the Human Brain has the gene markers C22orf34, LDLRAD3, RORB, KCNK2 with a NS-Forest FBeta value of 0.44211195928753183s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/97275027-975c-4154-97b5-8c3f82e62869", + "id": "http://example.org/90aafd0c-f327-58f2-8d2c-5564ffa8063c", "meta": { "basicPropertyValues": [ { @@ -788892,81 +788754,12 @@ "type": "INDIVIDUAL" }, { - "id": "http://example.org/9793a313-432c-4e79-991f-e37ba148c6f5", + "id": "http://example.org/90cccea2-6614-5179-bca7-a81a39edba61", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001148" - }, - { - "pred": "http://purl.obolibrary.org/obo/RO_0002175", - "val": "http://purl.obolibrary.org/obo/NCBITaxon_9606" - }, - { - "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Oligo_4" - } - ], - "comments": [ - "A Oligo_4 in the Human Brain has the gene markers OPALIN, TRIM59, CERCAM with a NS-Forest FBeta value of 0.5434782608695652s." - ] - }, - "type": "INDIVIDUAL" - }, - { - "id": "http://example.org/97e854f7-3230-436f-8a26-8d5d4dba0913", - "meta": { - "basicPropertyValues": [ - { - "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001092" - }, - { - "pred": "http://purl.obolibrary.org/obo/RO_0002175", - "val": "http://purl.obolibrary.org/obo/NCBITaxon_9606" - }, - { - "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Endo_1" - } - ], - "comments": [ - "A Endo_1 in the Human Brain has the gene markers COLEC12, VWF, FLT1, ABCG2 with a NS-Forest FBeta value of 0.831353919239905s." - ] - }, - "type": "INDIVIDUAL" - }, - { - "id": "http://example.org/9822c86f-c358-4179-8a2a-2419ce389e96", - "meta": { - "basicPropertyValues": [ - { - "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001217" - }, - { - "pred": "http://purl.obolibrary.org/obo/RO_0002175", - "val": "http://purl.obolibrary.org/obo/NCBITaxon_9606" - }, - { - "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Vip_8" - } - ], - "comments": [ - "A Vip_8 in the Human Brain has the gene markers VWDE, WSCD1, DACH2 with a NS-Forest FBeta value of 0.3183962264150943s." - ] - }, - "type": "INDIVIDUAL" - }, - { - "id": "http://example.org/9839b08b-da73-438e-a437-1a778538fb02", - "meta": { - "basicPropertyValues": [ - { - "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001225" + "val": "http://purl.obolibrary.org/obo/CLM_1001115" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -788974,68 +788767,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Vip_16" + "val": "L5 IT_6" } ], "comments": [ - "A Vip_16 in the Human Brain has the gene markers NDST4, SEMA3C, HTR2C, VIP with a NS-Forest FBeta value of 0.38s." + "A L5 IT_6 in the Human Brain has the gene markers NPFFR2, SULF2, RORB with a NS-Forest FBeta value of 0.6619822485207101s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/9aa8fe87-e17d-48bc-8263-6ea0ecbfc28e", + "id": "http://example.org/90e235f5-735a-524f-bfb4-20caf4f6d4f4", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001207" - }, - { - "pred": "http://purl.obolibrary.org/obo/RO_0002175", - "val": "http://purl.obolibrary.org/obo/NCBITaxon_9606" - }, - { - "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst_37" - } - ], - "comments": [ - "A Sst_37 in the Human Brain has the gene markers PROM1, CRHBP, SST with a NS-Forest FBeta value of 0.5s." - ] - }, - "type": "INDIVIDUAL" - }, - { - "id": "http://example.org/9ac8d71e-af5d-4f5d-8f9b-74d0a7d91785", - "meta": { - "basicPropertyValues": [ - { - "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001212" - }, - { - "pred": "http://purl.obolibrary.org/obo/RO_0002175", - "val": "http://purl.obolibrary.org/obo/NCBITaxon_9606" - }, - { - "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Vip_3" - } - ], - "comments": [ - "A Vip_3 in the Human Brain has the gene markers HPSE2, TRPC6, VIP with a NS-Forest FBeta value of 0.40249999999999997s." - ] - }, - "type": "INDIVIDUAL" - }, - { - "id": "http://example.org/9ae0a795-764a-4edc-afeb-00e876be49bb", - "meta": { - "basicPropertyValues": [ - { - "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001106" + "val": "http://purl.obolibrary.org/obo/CLM_1001227" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -789043,22 +788790,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "L5 ET_1" + "val": "Vip_18" } ], "comments": [ - "A L5 ET_1 in the Human Brain has the gene markers LINC00922, POU3F1 with a NS-Forest FBeta value of 0.728891820580475s." + "A Vip_18 in the Human Brain has the gene markers NOX4, RXRG, NDST4 with a NS-Forest FBeta value of 0.38953488372093026s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/9b09cb4d-d5cf-4534-bdad-1ee50830b2b4", + "id": "http://example.org/919265db-1edb-5a32-b22d-11ab03b7ad92", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001150" + "val": "http://purl.obolibrary.org/obo/CLM_1001215" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -789066,22 +788813,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Pax6_2" + "val": "Vip_6" } ], "comments": [ - "A Pax6_2 in the Human Brain has the gene markers TGFBR2, BCHE, RELN with a NS-Forest FBeta value of 0.7676056338028169s." + "A Vip_6 in the Human Brain has the gene markers SMOC1, IQGAP2, PARD3B with a NS-Forest FBeta value of 0.5082179930795848s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/9b216941-f143-4a20-ad48-5fd0d5160a0b", + "id": "http://example.org/9226d389-5899-5a14-a8fa-8f62bf664e3e", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001088" + "val": "http://purl.obolibrary.org/obo/CLM_1001157" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -789089,22 +788836,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Astro_3" + "val": "Pvalb_5" } ], "comments": [ - "A Astro_3 in the Human Brain has the gene markers HEPN1, F3, AGT, GJA1, AQP4 with a NS-Forest FBeta value of 0.5711722488038278s." + "A Pvalb_5 in the Human Brain has the gene markers SNTB1, COBLL1, GPR149, TAC1 with a NS-Forest FBeta value of 0.6364329268292682s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/9bf22b30-e012-48c5-bac2-f71b0ff07746", + "id": "http://example.org/924aa72f-5ace-5565-b1b8-393486b8ff10", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000073" + "val": "http://purl.obolibrary.org/obo/CLM_1001130" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -789112,22 +788859,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "L6b" + "val": "L6b_2" } ], "comments": [ - "A L6b in the Human Brain has the gene markers CCN2, ROS1 with a NS-Forest FBeta value of 0.819940964s." + "A L6b_2 in the Human Brain has the gene markers NPFFR2, ROS1 with a NS-Forest FBeta value of 0.565711462450593s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/9c470d27-06e5-42e3-997e-b33772d830f5", + "id": "http://example.org/93595eee-bb11-5458-b49e-22f9b2a26ef1", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001229" + "val": "http://purl.obolibrary.org/obo/CLM_1001166" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -789135,22 +788882,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Vip_20" + "val": "Sncg_5" } ], "comments": [ - "A Vip_20 in the Human Brain has the gene markers CBLN1, VIPR2, PPP1R1C, VIP with a NS-Forest FBeta value of 0.3658536585365853s." + "A Sncg_5 in the Human Brain has the gene markers COL5A2, TMEM47, MEGF11 with a NS-Forest FBeta value of 0.5214285714285715s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/9cfa1b8a-fa09-4637-b666-b88225732eeb", + "id": "http://example.org/94265f82-0c6d-5fb0-a8cf-ed8d99d6ac55", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001187" + "val": "http://purl.obolibrary.org/obo/CLM_1001228" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -789158,22 +788905,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst_17" + "val": "Vip_19" } ], "comments": [ - "A Sst_17 in the Human Brain has the gene markers PROM1, EYA2, PLCH1 with a NS-Forest FBeta value of 0.40226063829787234s." + "A Vip_19 in the Human Brain has the gene markers CBLN1, HTR2C, VIP with a NS-Forest FBeta value of 0.5353075170842825s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/9d1ffaca-f68f-4ccc-96d8-e6b6f7d174ca", + "id": "http://example.org/96b2a9c8-a39a-5bc9-bc60-cf34b48ef63e", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001182" + "val": "http://purl.obolibrary.org/obo/CLM_1001199" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -789181,22 +788928,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst_12" + "val": "Sst_29" } ], "comments": [ - "A Sst_12 in the Human Brain has the gene markers CBLN4, SLC24A4, EYS, PLCH1 with a NS-Forest FBeta value of 0.34348441926345613s." + "A Sst_29 in the Human Brain has the gene markers ENPP1, QRFPR, PIEZO2 with a NS-Forest FBeta value of 0.41353383458646614s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/9d3a3bbd-0374-449a-aa6e-dcd2dbcbc99a", + "id": "http://example.org/975fa71a-d17d-5fc1-9753-278aa64dc4b8", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001201" + "val": "http://purl.obolibrary.org/obo/CLM_1001136" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -789204,22 +788951,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst_31" + "val": "Lamp5_1" } ], "comments": [ - "A Sst_31 in the Human Brain has the gene markers FRZB, CBLN4, RGS5_ENSG00000143248, ARHGAP10 with a NS-Forest FBeta value of 0.4743083003952569s." + "A Lamp5_1 in the Human Brain has the gene markers ADAMTS20, KIT, FREM1 with a NS-Forest FBeta value of 0.48856548856548865s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/9d938e9f-152e-46f6-b2a4-b60c9be20e56", + "id": "http://example.org/97c5f6f6-25ef-532d-8f94-5411640d341b", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000044" + "val": "http://purl.obolibrary.org/obo/CLM_1001214" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -789227,22 +788974,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "NK cells" + "val": "Vip_5" } ], "comments": [ - "A NK cells in the Human Lung has the gene markers KLRF1, PRF1 with a NS-Forest FBeta value of 0.79s." + "A Vip_5 in the Human Brain has the gene markers LINC01630, IQGAP2, THSD4 with a NS-Forest FBeta value of 0.4801324503311257s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/9dd926b6-0891-4a8c-b081-d76501f8f15d", + "id": "http://example.org/98bbf553-8536-5984-be4c-ee14b1f62b87", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000042" + "val": "http://purl.obolibrary.org/obo/CLM_1001151" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -789250,22 +788997,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Myofibroblasts" + "val": "Pax6_3" } ], "comments": [ - "A Myofibroblasts in the Human Lung has the gene markers ASPN, DKK3, BCHE with a NS-Forest FBeta value of 0.48s." + "A Pax6_3 in the Human Brain has the gene markers PBX3, PDLIM5, FBN2 with a NS-Forest FBeta value of 0.7090163934426228s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/9e45c8ba-6ade-41d4-922e-7f710c99ce8a", + "id": "http://example.org/9a28d521-afa0-56a6-b670-be7d86609b76", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000019" + "val": "http://purl.obolibrary.org/obo/CLM_1001102" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -789273,22 +789020,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "DC2" + "val": "L4 IT_3" } ], "comments": [ - "A DC2 in the Human Lung has the gene markers CLEC10A, HLA-DQA1 with a NS-Forest FBeta value of 0.53s." + "A L4 IT_3 in the Human Brain has the gene markers TMEM215, KCNH8, RORB with a NS-Forest FBeta value of 0.6151315789473684s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/9e70bc7e-430d-4f13-9ef5-a227c640d592", + "id": "http://example.org/9a7cc455-7278-5569-a1a2-cd3a7c6d0016", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001154" + "val": "http://purl.obolibrary.org/obo/CLM_1001161" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -789296,22 +789043,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Pvalb_2" + "val": "Pvalb_9" } ], "comments": [ - "A Pvalb_2 in the Human Brain has the gene markers BCHE, SEMA3C, GPC5 with a NS-Forest FBeta value of 0.7717391304347827s." + "A Pvalb_9 in the Human Brain has the gene markers PVALB, POSTN with a NS-Forest FBeta value of 0.5845323741007195s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/9fe63e4a-5acd-424e-9529-dbfacc4ccae0", + "id": "http://example.org/9acf62d3-efb7-58be-9db1-987a795a62cd", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000005" + "val": "http://purl.obolibrary.org/obo/CLM_1001098" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -789319,22 +789066,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Alveolar Mph MT-positive" + "val": "L2/3 IT_5" } ], "comments": [ - "A Alveolar Mph MT-positive in the Human Lung has the gene markers HMOX1, HPGD with a NS-Forest FBeta value of 0.41s." + "A L2/3 IT_5 in the Human Brain has the gene markers GPX3, ADCYAP1, RMST with a NS-Forest FBeta value of 0.5061141304347826s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/a156bbb2-771e-4690-a318-80273510245a", + "id": "http://example.org/9d569766-6d7b-5ffa-894a-e7f346d314bf", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001091" + "val": "http://purl.obolibrary.org/obo/CLM_1000080" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -789342,22 +789089,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Chandelier_1" + "val": "Pvalb" } ], "comments": [ - "A Chandelier_1 in the Human Brain has the gene markers CA8, GPR149 with a NS-Forest FBeta value of 0.7997481108312343s." + "A Pvalb in the Human Brain has the gene markers PVALB, TAC1, MYO5B with a NS-Forest FBeta value of 0.691998764s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/a2c38f0c-4a65-477c-ab20-8b0d02c3ed21", + "id": "http://example.org/9db4af56-a03e-55e4-9cc4-eba9ae7a57bd", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000083" + "val": "http://purl.obolibrary.org/obo/CLM_1001221" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -789365,22 +789112,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst Chodl" + "val": "Vip_12" } ], "comments": [ - "A Sst Chodl in the Human Brain has the gene markers NPY with a NS-Forest FBeta value of 0.894026187s." + "A Vip_12 in the Human Brain has the gene markers SLC7A11, HCRTR2, EPS8 with a NS-Forest FBeta value of 0.5889057750759878s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/a355fc01-e244-499e-84b8-71ef1944c95d", + "id": "http://example.org/9dc679f4-af20-5b79-b168-b501bba9aada", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001134" + "val": "http://purl.obolibrary.org/obo/CLM_1001178" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -789388,22 +789135,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "L6b_6" + "val": "Sst_8" } ], "comments": [ - "A L6b_6 in the Human Brain has the gene markers PCOLCE2, FAM160A1, SULF1 with a NS-Forest FBeta value of 0.570388349514563s." + "A Sst_8 in the Human Brain has the gene markers STK32A, SYT9, RELN with a NS-Forest FBeta value of 0.5061619718309859s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/a3ef505e-8720-4ec2-94a4-9fcc8c953041", + "id": "http://example.org/9eca2b80-781f-567d-b31b-a1b9caed628b", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001164" + "val": "http://purl.obolibrary.org/obo/CLM_1001127" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -789411,17 +789158,17 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sncg_3" + "val": "L6 IT_1" } ], "comments": [ - "A Sncg_3 in the Human Brain has the gene markers SEMA3C, MYO1B, VAV3 with a NS-Forest FBeta value of 0.4528985507246377s." + "A L6 IT_1 in the Human Brain has the gene markers THEMIS, HOPX, MKX with a NS-Forest FBeta value of 0.6710122699386504s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/a40df9bd-94ed-405d-a0ca-ad30ddd653da", + "id": "http://example.org/9f82188c-bd91-599c-9113-28edfc33e7fd", "meta": { "basicPropertyValues": [ { @@ -789444,12 +789191,12 @@ "type": "INDIVIDUAL" }, { - "id": "http://example.org/a438c795-deaf-4c88-b32e-06ad4cc6b46d", + "id": "http://example.org/a03c0def-b059-59eb-8a2c-cee76ab191c9", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000014" + "val": "http://purl.obolibrary.org/obo/CLM_1000067" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -789457,22 +789204,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "CD8 T cells" + "val": "L5 ET" } ], "comments": [ - "A CD8 T cells in the Human Lung has the gene markers CCL5, CD3D with a NS-Forest FBeta value of 0.76s." + "A L5 ET in the Human Brain has the gene markers CHST8, POU3F1 with a NS-Forest FBeta value of 0.815891473s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/a4ce7c05-0645-46d9-b686-65498c887ff8", + "id": "http://example.org/a0401fb6-eba5-5d4f-a22a-7191180df638", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001141" + "val": "http://purl.obolibrary.org/obo/CLM_1001121" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -789480,17 +789227,17 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Lamp5_6" + "val": "L5/6 NP_6" } ], "comments": [ - "A Lamp5_6 in the Human Brain has the gene markers NDNF, KIT, TRPC3 with a NS-Forest FBeta value of 0.6357493857493858s." + "A L5/6 NP_6 in the Human Brain has the gene markers NPSR1-AS1, ARHGAP42 with a NS-Forest FBeta value of 0.7685614849187936s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/a5b0571b-ac66-4229-b03f-fa97712b799c", + "id": "http://example.org/a0836c38-f6fa-5092-b659-68bbe4745232", "meta": { "basicPropertyValues": [ { @@ -789513,35 +789260,12 @@ "type": "INDIVIDUAL" }, { - "id": "http://example.org/a5e35661-75fc-4874-abfc-fcffcc3fb7af", - "meta": { - "basicPropertyValues": [ - { - "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001181" - }, - { - "pred": "http://purl.obolibrary.org/obo/RO_0002175", - "val": "http://purl.obolibrary.org/obo/NCBITaxon_9606" - }, - { - "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst_11" - } - ], - "comments": [ - "A Sst_11 in the Human Brain has the gene markers ADGRG6, PROM1, SYT9 with a NS-Forest FBeta value of 0.34898477157360397s." - ] - }, - "type": "INDIVIDUAL" - }, - { - "id": "http://example.org/a6c1f66f-4dec-49f9-8dd8-1163130ffa3c", + "id": "http://example.org/a13f04d8-6ca9-522e-8867-e83329e3cee8", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000006" + "val": "http://purl.obolibrary.org/obo/CLM_1000080" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -789549,22 +789273,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Alveolar Mph proliferating" + "val": "Pvalb" } ], "comments": [ - "A Alveolar Mph proliferating in the Human Lung has the gene markers PCLAF, RRM2, UBE2C, NUSAP1 with a NS-Forest FBeta value of 0.26s." + "A Pvalb in the Human Brain has the gene markers PVALB, TAC1, MYO5B with a NS-Forest FBeta value of 0.691998764s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/a7666632-cfdc-404c-b4d4-f9f5550585a1", + "id": "http://example.org/a1634a4e-feed-54bd-9895-20c205e654b9", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001229" + "val": "http://purl.obolibrary.org/obo/CLM_1001226" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -789572,22 +789296,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Vip_20" + "val": "Vip_17" } ], "comments": [ - "A Vip_20 in the Human Brain has the gene markers CBLN1, VIPR2, PPP1R1C, VIP with a NS-Forest FBeta value of 0.3658536585365853s." + "A Vip_17 in the Human Brain has the gene markers PENK, PARD3B with a NS-Forest FBeta value of 0.6040502793296089s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/a815bee3-62db-402c-9467-322ca721a209", + "id": "http://example.org/a29aad04-bbf6-503a-bf9f-81caf832b532", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001187" + "val": "http://purl.obolibrary.org/obo/CLM_1001180" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -789595,22 +789319,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst_17" + "val": "Sst_10" } ], "comments": [ - "A Sst_17 in the Human Brain has the gene markers PROM1, EYA2, PLCH1 with a NS-Forest FBeta value of 0.40226063829787234s." + "A Sst_10 in the Human Brain has the gene markers HPSE2, EYA4, SST, PLCH1 with a NS-Forest FBeta value of 0.3615384615384615s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/a8b6e59a-d469-42d7-857b-e7c890408e53", + "id": "http://example.org/a41bb1bd-5fd3-5dbf-86f8-9c230501c6db", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001198" + "val": "http://purl.obolibrary.org/obo/CLM_1000069" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -789618,22 +789342,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst_28" + "val": "L5/6 NP" } ], "comments": [ - "A Sst_28 in the Human Brain has the gene markers PROM1, NDST4, TRPC6 with a NS-Forest FBeta value of 0.5884615384615385s." + "A L5/6 NP in the Human Brain has the gene markers NPSR1-AS1, TLL1 with a NS-Forest FBeta value of 0.899288218s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/a8f2176b-bc3e-45cd-81a9-66b08938cc09", + "id": "http://example.org/a4433a13-b5ab-589f-bd64-f85f1a0d2e1e", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001234" + "val": "http://purl.obolibrary.org/obo/CLM_1001226" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -789641,22 +789365,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Vip_25" + "val": "Vip_17" } ], "comments": [ - "A Vip_25 in the Human Brain has the gene markers NOX4, IQGAP2, CBLN4 with a NS-Forest FBeta value of 0.5275229357798166s." + "A Vip_17 in the Human Brain has the gene markers PENK, PARD3B with a NS-Forest FBeta value of 0.6040502793296089s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/a8ffb67e-9822-43bb-bd5a-3fcde90c6a5c", + "id": "http://example.org/a57d172b-80be-50ce-a0b7-e1ec6b4d6469", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001152" + "val": "http://purl.obolibrary.org/obo/CLM_1001091" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -789664,22 +789388,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Pax6_4" + "val": "Chandelier_1" } ], "comments": [ - "A Pax6_4 in the Human Brain has the gene markers PALMD, RELN with a NS-Forest FBeta value of 0.8731422505307855s." + "A Chandelier_1 in the Human Brain has the gene markers CA8, GPR149 with a NS-Forest FBeta value of 0.7997481108312343s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/a91c9cfc-1d76-4d58-9f33-d7e213bc2602", + "id": "http://example.org/aacb5317-93b8-52da-864c-d55fd8dafbe9", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000027" + "val": "http://purl.obolibrary.org/obo/CLM_1001228" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -789687,22 +789411,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Goblet (nasal)" + "val": "Vip_19" } ], "comments": [ - "A Goblet (nasal) in the Human Lung has the gene markers LYPD2, MUC5AC with a NS-Forest FBeta value of 0.81s." + "A Vip_19 in the Human Brain has the gene markers CBLN1, HTR2C, VIP with a NS-Forest FBeta value of 0.5353075170842825s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/a9b19d8f-4433-4605-b2e1-17a2e02eecb6", + "id": "http://example.org/ab77d720-83e9-5b1a-a0b8-da19409a60f9", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001088" + "val": "http://purl.obolibrary.org/obo/CLM_1001130" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -789710,22 +789434,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Astro_3" + "val": "L6b_2" } ], "comments": [ - "A Astro_3 in the Human Brain has the gene markers HEPN1, F3, AGT, GJA1, AQP4 with a NS-Forest FBeta value of 0.5711722488038278s." + "A L6b_2 in the Human Brain has the gene markers NPFFR2, ROS1 with a NS-Forest FBeta value of 0.565711462450593s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/a9e162c0-0ee4-4e76-a6c2-6ee7ce723407", + "id": "http://example.org/ad469582-bf00-57e8-bbb3-c4e209767774", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000041" + "val": "http://purl.obolibrary.org/obo/CLM_1001183" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -789733,22 +789457,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Multiciliated (non-nasal)" + "val": "Sst_13" } ], "comments": [ - "A Multiciliated (non-nasal) in the Human Lung has the gene markers C1orf194, MS4A8 with a NS-Forest FBeta value of 0.86s." + "A Sst_13 in the Human Brain has the gene markers FBN2, TRPC6, EPB41L4A with a NS-Forest FBeta value of 0.5461876832844575s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/a9fff2bf-8e91-491b-9071-b9cbcf161ae3", + "id": "http://example.org/ad6581ea-42a7-5bc4-b752-1fd804139e10", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001197" + "val": "http://purl.obolibrary.org/obo/CLM_1001235" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -789756,22 +789480,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst_27" + "val": "Vip_26" } ], "comments": [ - "A Sst_27 in the Human Brain has the gene markers EDNRA, MT-ND5, FREM1, SST with a NS-Forest FBeta value of 0.39168937329700276s." + "A Vip_26 in the Human Brain has the gene markers SEMA3C, LINC01630, HPSE2, TAC3 with a NS-Forest FBeta value of 0.5947955390334573s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/ab0cd6a7-8ecc-4928-b48f-89f83409ba23", + "id": "http://example.org/ae11f4b1-564f-5b4c-9899-d04eca186ae3", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001228" + "val": "http://purl.obolibrary.org/obo/CLM_1000076" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -789779,22 +789503,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Vip_19" + "val": "Micro/PVM" } ], "comments": [ - "A Vip_19 in the Human Brain has the gene markers CBLN1, HTR2C, VIP with a NS-Forest FBeta value of 0.5353075170842825s." + "A Micro/PVM in the Human Brain has the gene markers APBB1IP, DOCK8 with a NS-Forest FBeta value of 0.955105634s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/acf15e43-0dac-4756-abb2-5c93e4718339", + "id": "http://example.org/ae1cef1c-594b-55ec-851d-c013e92608c1", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000063" + "val": "http://purl.obolibrary.org/obo/CLM_1001095" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -789802,22 +789526,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Chandelier" + "val": "L2/3 IT_2" } ], "comments": [ - "A Chandelier in the Human Brain has the gene markers GPR149, CA8 with a NS-Forest FBeta value of 0.799748111s." + "A L2/3 IT_2 in the Human Brain has the gene markers THSD4, TESPA1, TRPC3 with a NS-Forest FBeta value of 0.6621140142517815s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/ad3ddf07-7c56-4ac2-97ef-37d4c1eeead8", + "id": "http://example.org/ae7bfb26-8398-53fd-b60a-9e9478620261", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000058" + "val": "http://purl.obolibrary.org/obo/CLM_1000068" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -789825,22 +789549,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Subpleural fibroblasts" + "val": "L5 IT" } ], "comments": [ - "A Subpleural fibroblasts in the Human Lung has the gene markers WT1, CXCL12 with a NS-Forest FBeta value of 0.60s." + "A L5 IT in the Human Brain has the gene markers ARSJ, RORB, KCNK2 with a NS-Forest FBeta value of 0.764261336s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/ad7851ab-7e7d-4f83-a3a4-525e32543915", + "id": "http://example.org/afb693d9-efb6-5703-923c-d9e46a3c1f76", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001169" + "val": "http://purl.obolibrary.org/obo/CLM_1001193" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -789848,22 +789572,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sncg_8" + "val": "Sst_23" } ], "comments": [ - "A Sncg_8 in the Human Brain has the gene markers NDST4, HTR2C, PRELID2 with a NS-Forest FBeta value of 0.49476135040745045s." + "A Sst_23 in the Human Brain has the gene markers NIBAN1, PROM1, THSD7B with a NS-Forest FBeta value of 0.6134686346863469s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/adfe9ec0-e162-49f1-9baa-e3a64d2515ce", + "id": "http://example.org/b1bc226c-032a-54ea-adee-7d7693ea705e", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000036" + "val": "http://purl.obolibrary.org/obo/CLM_1001133" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -789871,22 +789595,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Mast cells" + "val": "L6b_5" } ], "comments": [ - "A Mast cells in the Human Lung has the gene markers TPSAB1 with a NS-Forest FBeta value of 0.96s." + "A L6b_5 in the Human Brain has the gene markers NXPH4, NR4A2, SEMA3E with a NS-Forest FBeta value of 0.5693519079345852s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/aebf6e1e-7478-4304-b9dc-672beab7b4d5", + "id": "http://example.org/b1e6ca2a-d834-5899-b673-c22cd05953d5", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001217" + "val": "http://purl.obolibrary.org/obo/CLM_1001106" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -789894,22 +789618,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Vip_8" + "val": "L5 ET_1" } ], "comments": [ - "A Vip_8 in the Human Brain has the gene markers VWDE, WSCD1, DACH2 with a NS-Forest FBeta value of 0.3183962264150943s." + "A L5 ET_1 in the Human Brain has the gene markers LINC00922, POU3F1 with a NS-Forest FBeta value of 0.728891820580475s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/af030ed6-2635-4e00-a762-0c9b51eb4f83", + "id": "http://example.org/b2bc7cc7-0bb7-5787-b777-73507ecc4d1e", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001151" + "val": "http://purl.obolibrary.org/obo/CLM_1001176" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -789917,22 +789641,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Pax6_3" + "val": "Sst_6" } ], "comments": [ - "A Pax6_3 in the Human Brain has the gene markers PBX3, PDLIM5, FBN2 with a NS-Forest FBeta value of 0.7090163934426228s." + "A Sst_6 in the Human Brain has the gene markers DPP4, MAFB with a NS-Forest FBeta value of 0.38520801232665647s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/b09fb3ba-53d1-4ed7-8331-7bdfeb583a8a", + "id": "http://example.org/b40922b1-3c80-5b08-bdf0-ec9c2b2e23bd", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001180" + "val": "http://purl.obolibrary.org/obo/CLM_1001210" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -789940,22 +789664,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst_10" + "val": "Vip_1" } ], "comments": [ - "A Sst_10 in the Human Brain has the gene markers HPSE2, EYA4, SST, PLCH1 with a NS-Forest FBeta value of 0.3615384615384615s." + "A Vip_1 in the Human Brain has the gene markers FLT1, LRRC1, SHISA8 with a NS-Forest FBeta value of 0.400763358778626s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/b148344f-8287-429d-a834-5e76ccda5458", + "id": "http://example.org/b455cd88-5f0b-5fd0-9c97-fb495896b8c4", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001211" + "val": "http://purl.obolibrary.org/obo/CLM_1001214" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -789963,22 +789687,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Vip_2" + "val": "Vip_5" } ], "comments": [ - "A Vip_2 in the Human Brain has the gene markers IGFBP5, SLC22A3, PTGDS, VIP with a NS-Forest FBeta value of 0.4741379310344827s." + "A Vip_5 in the Human Brain has the gene markers LINC01630, IQGAP2, THSD4 with a NS-Forest FBeta value of 0.4801324503311257s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/b1e21fc9-3b33-4e7a-a48c-975522c51a6a", + "id": "http://example.org/b46bcd29-eafe-5377-b7ec-69c701664862", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001139" + "val": "http://purl.obolibrary.org/obo/CLM_1001153" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -789986,22 +789710,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Lamp5_4" + "val": "Pvalb_1" } ], "comments": [ - "A Lamp5_4 in the Human Brain has the gene markers ROR2, TRPC3, FBXL7, LINC00298 with a NS-Forest FBeta value of 0.40425531914893614s." + "A Pvalb_1 in the Human Brain has the gene markers MYBPC1, GPR149, SVIL with a NS-Forest FBeta value of 0.6944444444444444s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/b449f1f9-3b0a-4c96-8a66-1465e499a850", + "id": "http://example.org/b4dddbf5-b745-528d-a3f1-808858d75c7f", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000010" + "val": "http://purl.obolibrary.org/obo/CLM_1001168" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -790009,22 +789733,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "AT2 proliferating" + "val": "Sncg_7" } ], "comments": [ - "A AT2 proliferating in the Human Lung has the gene markers PEG10, PRC1, TOP2A with a NS-Forest FBeta value of 0.61s." + "A Sncg_7 in the Human Brain has the gene markers HTR3A, SYT9, MCTP2 with a NS-Forest FBeta value of 0.7097791798107256s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/b6cf8b92-bc13-4c50-8cd2-0842f3f9e470", + "id": "http://example.org/b5a08c20-6c1e-5799-95dc-7c67595b375e", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001221" + "val": "http://purl.obolibrary.org/obo/CLM_1001205" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -790032,22 +789756,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Vip_12" + "val": "Sst_35" } ], "comments": [ - "A Vip_12 in the Human Brain has the gene markers SLC7A11, HCRTR2, EPS8 with a NS-Forest FBeta value of 0.5889057750759878s." + "A Sst_35 in the Human Brain has the gene markers ACVR1C, EYA2, TRIM67 with a NS-Forest FBeta value of 0.5226480836236933s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/b8383956-4bfc-4ab2-a8bc-417a31cf65ac", + "id": "http://example.org/b5a8c5d8-c5f9-5026-b716-d1975b3d83ea", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001165" + "val": "http://purl.obolibrary.org/obo/CLM_1000073" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -790055,22 +789779,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sncg_4" + "val": "L6b" } ], "comments": [ - "A Sncg_4 in the Human Brain has the gene markers LINC01539, DCN, THSD7B with a NS-Forest FBeta value of 0.6752411575562701s." + "A L6b in the Human Brain has the gene markers CCN2, ROS1 with a NS-Forest FBeta value of 0.819940964s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/b8c205d7-8a30-454b-b330-34283aa3ae9f", + "id": "http://example.org/b64863d2-ee8c-5668-bdda-2bebbe671005", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001168" + "val": "http://purl.obolibrary.org/obo/CLM_1001233" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -790078,22 +789802,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sncg_7" + "val": "Vip_24" } ], "comments": [ - "A Sncg_7 in the Human Brain has the gene markers HTR3A, SYT9, MCTP2 with a NS-Forest FBeta value of 0.7097791798107256s." + "A Vip_24 in the Human Brain has the gene markers LYPD1, ENHO, CHRNA2 with a NS-Forest FBeta value of 0.36276223776223776s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/b95946da-cc44-42a2-8603-97e4f9587cc4", + "id": "http://example.org/b6cbb644-17cb-58e8-bb59-1c07444ee029", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000079" + "val": "http://purl.obolibrary.org/obo/CLM_1001135" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -790101,22 +789825,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Pax6" + "val": "Lamp5 Lhx6_1" } ], "comments": [ - "A Pax6 in the Human Brain has the gene markers RELN, HCRTR2 with a NS-Forest FBeta value of 0.724125093s." + "A Lamp5 Lhx6_1 in the Human Brain has the gene markers CHST9, LAMP5 with a NS-Forest FBeta value of 0.8216783216783217s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/ba1a83d9-f011-4dd5-a858-1fe040418f04", + "id": "http://example.org/b75080ab-5913-59be-9455-35fe943bf334", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001160" + "val": "http://purl.obolibrary.org/obo/CLM_1001189" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -790124,22 +789848,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Pvalb_8" + "val": "Sst_19" } ], "comments": [ - "A Pvalb_8 in the Human Brain has the gene markers CA8, FGFR2, TAC1 with a NS-Forest FBeta value of 0.5676733780760627s." + "A Sst_19 in the Human Brain has the gene markers EPB41L4A, GPC5, PLCH1 with a NS-Forest FBeta value of 0.7339449541284404s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/ba314ffb-86b0-4f7a-a09a-60e5872a7ff0", + "id": "http://example.org/b89be3e2-8e24-5f56-b365-0ca4845b9cbe", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001199" + "val": "http://purl.obolibrary.org/obo/CLM_1001100" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -790147,22 +789871,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst_29" + "val": "L4 IT_1" } ], "comments": [ - "A Sst_29 in the Human Brain has the gene markers ENPP1, QRFPR, PIEZO2 with a NS-Forest FBeta value of 0.41353383458646614s." + "A L4 IT_1 in the Human Brain has the gene markers TPBG, RP11-197K6.1, ST8SIA4 with a NS-Forest FBeta value of 0.6129032258064517s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/ba99e73c-b2e6-4cba-ac66-43258571fd4e", + "id": "http://example.org/b9892cc5-6da9-58ed-9369-e07be078dbbb", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000035" + "val": "http://purl.obolibrary.org/obo/CLM_1001152" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -790170,22 +789894,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Lymphatic EC proliferating" + "val": "Pax6_4" } ], "comments": [ - "A Lymphatic EC proliferating in the Human Lung has the gene markers CENPF, CCL21 with a NS-Forest FBeta value of 0.73s." + "A Pax6_4 in the Human Brain has the gene markers PALMD, RELN with a NS-Forest FBeta value of 0.8731422505307855s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/bacb2560-b0aa-4a07-8285-28b82a874184", + "id": "http://example.org/b9fd4abd-a099-55fa-9f9c-0f49a7981760", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001227" + "val": "http://purl.obolibrary.org/obo/CLM_1001129" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -790193,22 +789917,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Vip_18" + "val": "L6b_1" } ], "comments": [ - "A Vip_18 in the Human Brain has the gene markers NOX4, RXRG, NDST4 with a NS-Forest FBeta value of 0.38953488372093026s." + "A L6b_1 in the Human Brain has the gene markers SEMA3D, ITGA11, FAM160A1 with a NS-Forest FBeta value of 0.5724637681159421s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/bcc29a1a-4745-498b-8809-204b15f1e37f", + "id": "http://example.org/bb029bd8-9263-58f3-b456-899d9cfe8bf3", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001177" + "val": "http://purl.obolibrary.org/obo/CLM_1001237" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -790216,22 +789940,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst_7" + "val": "Vip_28" } ], "comments": [ - "A Sst_7 in the Human Brain has the gene markers EPSTI1, PIEZO2, HPSE2, PLCH1 with a NS-Forest FBeta value of 0.4469696969696969s." + "A Vip_28 in the Human Brain has the gene markers HTR2C, DCN with a NS-Forest FBeta value of 0.3763440860215054s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/bf7c5bd9-847a-4d01-b0d5-7c184e16cb00", + "id": "http://example.org/bbb9c322-4893-53ee-9871-27093732e30b", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001223" + "val": "http://purl.obolibrary.org/obo/CLM_1001137" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -790239,22 +789963,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Vip_14" + "val": "Lamp5_2" } ], "comments": [ - "A Vip_14 in the Human Brain has the gene markers ST18, KCNH8, CA10, VIP with a NS-Forest FBeta value of 0.5968468468468467s." + "A Lamp5_2 in the Human Brain has the gene markers PBX3, KIT with a NS-Forest FBeta value of 0.7316272965879266s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/c02c2fd5-1b8e-4de4-b20b-d41c0ecff09e", + "id": "http://example.org/bc609f94-b606-5960-827b-9459c5b6e6b8", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000077" + "val": "http://purl.obolibrary.org/obo/CLM_1001110" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -790262,22 +789986,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "OPC" + "val": "L5 IT_1" } ], "comments": [ - "A OPC in the Human Brain has the gene markers FERMT1 with a NS-Forest FBeta value of 0.741071429s." + "A L5 IT_1 in the Human Brain has the gene markers CHST2, TLL1, RORB with a NS-Forest FBeta value of 0.6250000000000001s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/c19d6f69-e605-42ce-9298-3f9a3e62b579", + "id": "http://example.org/bebd3322-06a0-562b-8718-bd62fd168ef1", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000081" + "val": "http://purl.obolibrary.org/obo/CLM_1001219" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -790285,22 +790009,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sncg" + "val": "Vip_10" } ], "comments": [ - "A Sncg in the Human Brain has the gene markers RXRG, THSD7B with a NS-Forest FBeta value of 0.628943702s." + "A Vip_10 in the Human Brain has the gene markers ABI3BP, KCNG2, PARD3B with a NS-Forest FBeta value of 0.5405405405405405s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/c1a17133-2fa0-4f7c-909a-81e2f96bb313", + "id": "http://example.org/bef8deb2-682e-56c3-9e4a-e0d4e88328e6", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001135" + "val": "http://purl.obolibrary.org/obo/CLM_1001093" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -790308,22 +790032,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Lamp5 Lhx6_1" + "val": "Endo_2" } ], "comments": [ - "A Lamp5 Lhx6_1 in the Human Brain has the gene markers CHST9, LAMP5 with a NS-Forest FBeta value of 0.8216783216783217s." + "A Endo_2 in the Human Brain has the gene markers HERC2P3, PRKCH with a NS-Forest FBeta value of 0.8270877944325483s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/c1c0cae1-5730-48ec-8c95-3358bdaa539d", + "id": "http://example.org/bf895c5d-205a-5ff1-a7af-c35981907bb8", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001235" + "val": "http://purl.obolibrary.org/obo/CLM_1001187" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -790331,22 +790055,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Vip_26" + "val": "Sst_17" } ], "comments": [ - "A Vip_26 in the Human Brain has the gene markers SEMA3C, LINC01630, HPSE2, TAC3 with a NS-Forest FBeta value of 0.5947955390334573s." + "A Sst_17 in the Human Brain has the gene markers PROM1, EYA2, PLCH1 with a NS-Forest FBeta value of 0.40226063829787234s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/c1d3ad7e-8790-4820-9f62-492a54b3d61e", + "id": "http://example.org/bf89bcc6-ae10-586a-ac86-e4555f50114c", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001119" + "val": "http://purl.obolibrary.org/obo/CLM_1001088" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -790354,22 +790078,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "L5/6 NP_4" + "val": "Astro_3" } ], "comments": [ - "A L5/6 NP_4 in the Human Brain has the gene markers FSHR, CLMN, TLL1 with a NS-Forest FBeta value of 0.740632318501171s." + "A Astro_3 in the Human Brain has the gene markers HEPN1, F3, AGT, GJA1, AQP4 with a NS-Forest FBeta value of 0.5711722488038278s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/c23485c4-1ee9-41f0-abab-37cdd0006242", + "id": "http://example.org/bfa7d1c5-b072-5e4c-931c-06e4258688e6", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000067" + "val": "http://purl.obolibrary.org/obo/CLM_1001097" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -790377,22 +790101,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "L5 ET" + "val": "L2/3 IT_4" } ], "comments": [ - "A L5 ET in the Human Brain has the gene markers CHST8, POU3F1 with a NS-Forest FBeta value of 0.815891473s." + "A L2/3 IT_4 in the Human Brain has the gene markers TPBG, FAP, ONECUT2, COL5A2 with a NS-Forest FBeta value of 0.6337047353760445s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/c323fe58-86a3-4bad-abb8-9b66c579991d", + "id": "http://example.org/c1be7f2d-212a-5246-92c3-8e7994ef3003", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001107" + "val": "http://purl.obolibrary.org/obo/CLM_1001155" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -790400,22 +790124,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "L5 ET_2" + "val": "Pvalb_3" } ], "comments": [ - "A L5 ET_2 in the Human Brain has the gene markers ATP6V1C2, LRP2, ST8SIA2 with a NS-Forest FBeta value of 0.7593749999999999s." + "A Pvalb_3 in the Human Brain has the gene markers TAFA4, SYT10, ANOS1, HTR4 with a NS-Forest FBeta value of 0.635593220338983s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/c33ef4eb-10fc-4521-8c7a-721952166b32", + "id": "http://example.org/c220880e-2a72-5069-9f2d-1df0b4c842b4", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001189" + "val": "http://purl.obolibrary.org/obo/CLM_1001182" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -790423,22 +790147,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst_19" + "val": "Sst_12" } ], "comments": [ - "A Sst_19 in the Human Brain has the gene markers EPB41L4A, GPC5, PLCH1 with a NS-Forest FBeta value of 0.7339449541284404s." + "A Sst_12 in the Human Brain has the gene markers CBLN4, SLC24A4, EYS, PLCH1 with a NS-Forest FBeta value of 0.34348441926345613s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/c4a47d4c-953b-45fd-83bc-e3f0778099b7", + "id": "http://example.org/c22f7e92-116a-54b8-87f9-b64c3c5a8498", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001090" + "val": "http://purl.obolibrary.org/obo/CLM_1001211" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -790446,22 +790170,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Astro_5" + "val": "Vip_2" } ], "comments": [ - "A Astro_5 in the Human Brain has the gene markers TNC, CD44 with a NS-Forest FBeta value of 0.7512626262626262s." + "A Vip_2 in the Human Brain has the gene markers IGFBP5, SLC22A3, PTGDS, VIP with a NS-Forest FBeta value of 0.4741379310344827s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/c4e21a85-3f5e-430c-b8c5-a77111c0d88b", + "id": "http://example.org/c3480f1a-6e04-5e59-89f9-1ee48be77034", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000079" + "val": "http://purl.obolibrary.org/obo/CLM_1001156" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -790469,22 +790193,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Pax6" + "val": "Pvalb_4" } ], "comments": [ - "A Pax6 in the Human Brain has the gene markers RELN, HCRTR2 with a NS-Forest FBeta value of 0.724125093s." + "A Pvalb_4 in the Human Brain has the gene markers MT-ND4L, RGS5_ENSG00000143248, WIF1, TAC1 with a NS-Forest FBeta value of 0.4390934844192635s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/c6008f39-aef8-4e05-8d50-06881c2b7c5e", + "id": "http://example.org/c38be215-5341-5ac3-b916-f28efd10ddf6", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000021" + "val": "http://purl.obolibrary.org/obo/CLM_1001097" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -790492,22 +790216,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "EC aerocyte capillary" + "val": "L2/3 IT_4" } ], "comments": [ - "A EC aerocyte capillary in the Human Lung has the gene markers EDNRB with a NS-Forest FBeta value of 0.83s." + "A L2/3 IT_4 in the Human Brain has the gene markers TPBG, FAP, ONECUT2, COL5A2 with a NS-Forest FBeta value of 0.6337047353760445s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/c877ff8a-5933-49bd-bb6d-dbf9da1b4561", + "id": "http://example.org/c5615c94-4297-5bb6-affe-35e4162bc9c0", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001149" + "val": "http://purl.obolibrary.org/obo/CLM_1001094" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -790515,22 +790239,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Pax6_1" + "val": "L2/3 IT_1" } ], "comments": [ - "A Pax6_1 in the Human Brain has the gene markers IGFBP7, EPS8, HCRTR2 with a NS-Forest FBeta value of 0.767426273458445s." + "A L2/3 IT_1 in the Human Brain has the gene markers PRSS12, ROS1, COL5A2, SLC38A11 with a NS-Forest FBeta value of 0.5517711171662125s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/c9229e9e-646b-4edf-9a40-3c1974fa7466", + "id": "http://example.org/c65f8ed6-9991-5fcc-b13e-6ed05809b482", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001190" + "val": "http://purl.obolibrary.org/obo/CLM_1001122" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -790538,22 +790262,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst_20" + "val": "L6 CT_1" } ], "comments": [ - "A Sst_20 in the Human Brain has the gene markers QRFPR, HGF, RELN with a NS-Forest FBeta value of 0.4671717171717172s." + "A L6 CT_1 in the Human Brain has the gene markers LGR6, OR1Q1, SULF1 with a NS-Forest FBeta value of 0.665374677002584s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/ca069a16-f319-4a69-9f0b-68cbd852794d", + "id": "http://example.org/c66cbd73-64c2-58a7-b8b2-4a9f178fe918", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000034" + "val": "http://purl.obolibrary.org/obo/CLM_1001181" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -790561,22 +790285,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Lymphatic EC mature" + "val": "Sst_11" } ], "comments": [ - "A Lymphatic EC mature in the Human Lung has the gene markers CCL21 with a NS-Forest FBeta value of 0.88s." + "A Sst_11 in the Human Brain has the gene markers ADGRG6, PROM1, SYT9 with a NS-Forest FBeta value of 0.34898477157360397s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/ca26bea1-fdd3-4efd-b025-6b55c620aadb", + "id": "http://example.org/c6a0df81-e8d0-5a72-8d68-98ceaefb7037", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001191" + "val": "http://purl.obolibrary.org/obo/CLM_1001184" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -790584,22 +790308,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst_21" + "val": "Sst_14" } ], "comments": [ - "A Sst_21 in the Human Brain has the gene markers ANGPT1, FBN2, COL24A1 with a NS-Forest FBeta value of 0.48315602836879434s." + "A Sst_14 in the Human Brain has the gene markers SLC9A2, ROR1, EYA4 with a NS-Forest FBeta value of 0.46314741035856577s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/ca4942a6-512b-420c-ae1c-1d5bfc3b2207", + "id": "http://example.org/c7f22ea0-0644-5a0d-b13d-238be4ea0858", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001181" + "val": "http://purl.obolibrary.org/obo/CLM_1001148" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -790607,22 +790331,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst_11" + "val": "Oligo_4" } ], "comments": [ - "A Sst_11 in the Human Brain has the gene markers ADGRG6, PROM1, SYT9 with a NS-Forest FBeta value of 0.34898477157360397s." + "A Oligo_4 in the Human Brain has the gene markers OPALIN, TRIM59, CERCAM with a NS-Forest FBeta value of 0.5434782608695652s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/ca699e85-095b-4fd6-9f5f-1627e558ab20", + "id": "http://example.org/ca1bca49-71ac-52f4-9696-d732b5a7bdda", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001171" + "val": "http://purl.obolibrary.org/obo/CLM_1001207" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -790630,22 +790354,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst_1" + "val": "Sst_37" } ], "comments": [ - "A Sst_1 in the Human Brain has the gene markers NDST4, ANGPT1, EPB41L4A with a NS-Forest FBeta value of 0.5104166666666666s." + "A Sst_37 in the Human Brain has the gene markers PROM1, CRHBP, SST with a NS-Forest FBeta value of 0.5s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/cb8e8566-f884-46a1-8a2d-178fbb0f4b75", + "id": "http://example.org/ca3ef774-ad2e-5a80-be05-c11eb1a3ea07", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001230" + "val": "http://purl.obolibrary.org/obo/CLM_1001162" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -790653,22 +790377,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Vip_21" + "val": "Sncg_1" } ], "comments": [ - "A Vip_21 in the Human Brain has the gene markers ALDH1A2, ROR2 with a NS-Forest FBeta value of 0.6180811808118081s." + "A Sncg_1 in the Human Brain has the gene markers UNC5B, TAFA4, THSD7B with a NS-Forest FBeta value of 0.5883947939262474s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/cc78ad3d-4993-431a-a874-ecc3dbe1e6b5", + "id": "http://example.org/caf7aad2-b748-53c9-b45c-eec3977cfc01", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000003" + "val": "http://purl.obolibrary.org/obo/CLM_1001132" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -790676,22 +790400,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Alveolar macrophages" + "val": "L6b_4" } ], "comments": [ - "A Alveolar macrophages in the Human Lung has the gene markers MSR1, FABP4 with a NS-Forest FBeta value of 0.80s." + "A L6b_4 in the Human Brain has the gene markers NR4A2, ATP8B4 with a NS-Forest FBeta value of 0.5812101910828025s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/cd7b17d6-26fe-4a1c-a79e-30f921ed7d1c", + "id": "http://example.org/cbee5de5-da3c-5ca4-b5bd-8bd32502b068", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000033" + "val": "http://purl.obolibrary.org/obo/CLM_1000074" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -790699,22 +790423,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Lymphatic EC differentiating" + "val": "Lamp5" } ], "comments": [ - "A Lymphatic EC differentiating in the Human Lung has the gene markers SEMA3D, KALRN with a NS-Forest FBeta value of 0.42s." + "A Lamp5 in the Human Brain has the gene markers LINC00298, KIT with a NS-Forest FBeta value of 0.814687838s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/cd8458ae-2b00-4c9d-b037-15eb3a7d102a", + "id": "http://example.org/cd3ebad5-bfb5-5a64-9a11-1d51f5873544", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001162" + "val": "http://purl.obolibrary.org/obo/CLM_1001231" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -790722,22 +790446,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sncg_1" + "val": "Vip_22" } ], "comments": [ - "A Sncg_1 in the Human Brain has the gene markers UNC5B, TAFA4, THSD7B with a NS-Forest FBeta value of 0.5883947939262474s." + "A Vip_22 in the Human Brain has the gene markers ABI3BP, SLC7A11, EDNRA with a NS-Forest FBeta value of 0.5279126213592233s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/d1b2e909-ebd6-403a-aaf2-a644da8bdbb7", + "id": "http://example.org/cd42f121-63a4-54c6-a874-88b267ef873c", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001196" + "val": "http://purl.obolibrary.org/obo/CLM_1001157" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -790745,22 +790469,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst_26" + "val": "Pvalb_5" } ], "comments": [ - "A Sst_26 in the Human Brain has the gene markers MME, FBN2, MCUB with a NS-Forest FBeta value of 0.2326233183856502s." + "A Pvalb_5 in the Human Brain has the gene markers SNTB1, COBLL1, GPR149, TAC1 with a NS-Forest FBeta value of 0.6364329268292682s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/d225cb81-3352-4d63-bec0-852d59718f70", + "id": "http://example.org/cd80d87a-244c-511f-a22c-b0cb76537e3e", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001175" + "val": "http://purl.obolibrary.org/obo/CLM_1001169" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -790768,17 +790492,17 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst_5" + "val": "Sncg_8" } ], "comments": [ - "A Sst_5 in the Human Brain has the gene markers SH3RF2, NPY, CALB1 with a NS-Forest FBeta value of 0.5248833592534992s." + "A Sncg_8 in the Human Brain has the gene markers NDST4, HTR2C, PRELID2 with a NS-Forest FBeta value of 0.49476135040745045s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/d33e232a-c423-42af-a211-5ae4b1514a3f", + "id": "http://example.org/ce55a1d4-8506-5fd9-9e8f-b93318f31545", "meta": { "basicPropertyValues": [ { @@ -790801,12 +790525,12 @@ "type": "INDIVIDUAL" }, { - "id": "http://example.org/d35e9a00-11fb-4526-9c1b-1370ef1c5882", + "id": "http://example.org/ce6e61d7-e493-543b-8d78-4560237e7f21", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000020" + "val": "http://purl.obolibrary.org/obo/CLM_1000071" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -790814,17 +790538,40 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Deuterosomal" + "val": "L6 IT" } ], "comments": [ - "A Deuterosomal in the Human Lung has the gene markers CDC20B, CEP78 with a NS-Forest FBeta value of 0.71s." + "A L6 IT in the Human Brain has the gene markers LINC00507, THEMIS with a NS-Forest FBeta value of 0.641695703s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/d4ec9c07-632e-4e2e-8d5d-0c9a13c4e114", + "id": "http://example.org/d0a71210-7b78-57df-a330-58b206a17eb1", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://purl.obolibrary.org/obo/CLM_0010000", + "val": "http://purl.obolibrary.org/obo/CLM_1001125" + }, + { + "pred": "http://purl.obolibrary.org/obo/RO_0002175", + "val": "http://purl.obolibrary.org/obo/NCBITaxon_9606" + }, + { + "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", + "val": "L6 IT Car3_1" + } + ], + "comments": [ + "A L6 IT Car3_1 in the Human Brain has the gene markers LINC00348 with a NS-Forest FBeta value of 0.665s." + ] + }, + "type": "INDIVIDUAL" + }, + { + "id": "http://example.org/d0fd407c-f703-5334-8419-0b901c899564", "meta": { "basicPropertyValues": [ { @@ -790847,7 +790594,76 @@ "type": "INDIVIDUAL" }, { - "id": "http://example.org/d50e3377-3022-41ec-85fa-074f704d8bc1", + "id": "http://example.org/d2303cb2-2009-5767-a4d6-816fc5ac0be5", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://purl.obolibrary.org/obo/CLM_0010000", + "val": "http://purl.obolibrary.org/obo/CLM_1001158" + }, + { + "pred": "http://purl.obolibrary.org/obo/RO_0002175", + "val": "http://purl.obolibrary.org/obo/NCBITaxon_9606" + }, + { + "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", + "val": "Pvalb_6" + } + ], + "comments": [ + "A Pvalb_6 in the Human Brain has the gene markers POSTN, SULF1, CEMIP, RNF144B with a NS-Forest FBeta value of 0.29255319148936176s." + ] + }, + "type": "INDIVIDUAL" + }, + { + "id": "http://example.org/d2e93984-5463-520a-9f60-dd5af389d746", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://purl.obolibrary.org/obo/CLM_0010000", + "val": "http://purl.obolibrary.org/obo/CLM_1001172" + }, + { + "pred": "http://purl.obolibrary.org/obo/RO_0002175", + "val": "http://purl.obolibrary.org/obo/NCBITaxon_9606" + }, + { + "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", + "val": "Sst_2" + } + ], + "comments": [ + "A Sst_2 in the Human Brain has the gene markers HPGD, RGS5_ENSG00000143248, SPON1 with a NS-Forest FBeta value of 0.5613577023498695s." + ] + }, + "type": "INDIVIDUAL" + }, + { + "id": "http://example.org/d429af9e-ed74-5440-9e7c-c8bb856082ee", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://purl.obolibrary.org/obo/CLM_0010000", + "val": "http://purl.obolibrary.org/obo/CLM_1001156" + }, + { + "pred": "http://purl.obolibrary.org/obo/RO_0002175", + "val": "http://purl.obolibrary.org/obo/NCBITaxon_9606" + }, + { + "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", + "val": "Pvalb_4" + } + ], + "comments": [ + "A Pvalb_4 in the Human Brain has the gene markers MT-ND4L, RGS5_ENSG00000143248, WIF1, TAC1 with a NS-Forest FBeta value of 0.4390934844192635s." + ] + }, + "type": "INDIVIDUAL" + }, + { + "id": "http://example.org/d443974f-1ebd-5c14-8ec6-7a0c3f50f3b2", "meta": { "basicPropertyValues": [ { @@ -790870,35 +790686,12 @@ "type": "INDIVIDUAL" }, { - "id": "http://example.org/d56bd760-3fdb-4814-8237-568d8dd38c8d", + "id": "http://example.org/d4b92a78-d00c-5ca0-84f5-e391741dfb8d", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001235" - }, - { - "pred": "http://purl.obolibrary.org/obo/RO_0002175", - "val": "http://purl.obolibrary.org/obo/NCBITaxon_9606" - }, - { - "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Vip_26" - } - ], - "comments": [ - "A Vip_26 in the Human Brain has the gene markers SEMA3C, LINC01630, HPSE2, TAC3 with a NS-Forest FBeta value of 0.5947955390334573s." - ] - }, - "type": "INDIVIDUAL" - }, - { - "id": "http://example.org/d57aeec6-33b6-4d0e-b50a-b5db40f8bf43", - "meta": { - "basicPropertyValues": [ - { - "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001174" + "val": "http://purl.obolibrary.org/obo/CLM_1001199" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -790906,22 +790699,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst_4" + "val": "Sst_29" } ], "comments": [ - "A Sst_4 in the Human Brain has the gene markers SCARA5, PIEZO2, CRYBG3, PLCH1 with a NS-Forest FBeta value of 0.5479002624671917s." + "A Sst_29 in the Human Brain has the gene markers ENPP1, QRFPR, PIEZO2 with a NS-Forest FBeta value of 0.41353383458646614s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/d5c7e2e6-7ac2-44ee-ae71-c39860bdbb14", + "id": "http://example.org/d4ec6322-15c9-5fc1-a349-ddaf197bd5d8", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001117" + "val": "http://purl.obolibrary.org/obo/CLM_1001201" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -790929,22 +790722,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "L5/6 NP_2" + "val": "Sst_31" } ], "comments": [ - "A L5/6 NP_2 in the Human Brain has the gene markers SLC17A6, CRYM with a NS-Forest FBeta value of 0.4607508532423208s." + "A Sst_31 in the Human Brain has the gene markers FRZB, CBLN4, RGS5_ENSG00000143248, ARHGAP10 with a NS-Forest FBeta value of 0.4743083003952569s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/d77db51a-bfec-4f98-a4bb-d81b17e2f8d3", + "id": "http://example.org/d528c703-7cd7-5692-bdd2-4fe8650f73ee", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001226" + "val": "http://purl.obolibrary.org/obo/CLM_1001229" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -790952,22 +790745,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Vip_17" + "val": "Vip_20" } ], "comments": [ - "A Vip_17 in the Human Brain has the gene markers PENK, PARD3B with a NS-Forest FBeta value of 0.6040502793296089s." + "A Vip_20 in the Human Brain has the gene markers CBLN1, VIPR2, PPP1R1C, VIP with a NS-Forest FBeta value of 0.3658536585365853s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/d90e0687-39aa-43fc-846b-69b9e31e5748", + "id": "http://example.org/d5953578-cdfb-51d6-a7d7-b32758ac4a09", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001220" + "val": "http://purl.obolibrary.org/obo/CLM_1001188" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -790975,22 +790768,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Vip_11" + "val": "Sst_18" } ], "comments": [ - "A Vip_11 in the Human Brain has the gene markers ABI3BP, MCTP2, SLC22A3, PROS1 with a NS-Forest FBeta value of 0.43523676880222845s." + "A Sst_18 in the Human Brain has the gene markers ENOX2, PNOC, SST, RELN with a NS-Forest FBeta value of 0.34307875894988066s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/d9121c36-08b1-4545-87a5-37b473273294", + "id": "http://example.org/d5b9061d-2796-51e5-bcaa-87d5925ecaa1", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000082" + "val": "http://purl.obolibrary.org/obo/CLM_1000071" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -790998,22 +790791,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst" + "val": "L6 IT" } ], "comments": [ - "A Sst in the Human Brain has the gene markers SST, PLCH1 with a NS-Forest FBeta value of 0.842367005s." + "A L6 IT in the Human Brain has the gene markers LINC00507, THEMIS with a NS-Forest FBeta value of 0.641695703s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/d9c4603c-1c49-4155-bd76-0f0ade4ceafa", + "id": "http://example.org/d781b304-b8fc-5868-81b4-3cc113c8165f", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001190" + "val": "http://purl.obolibrary.org/obo/CLM_1001096" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -791021,22 +790814,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst_20" + "val": "L2/3 IT_3" } ], "comments": [ - "A Sst_20 in the Human Brain has the gene markers QRFPR, HGF, RELN with a NS-Forest FBeta value of 0.4671717171717172s." + "A L2/3 IT_3 in the Human Brain has the gene markers COL27A1, ONECUT2, MOXD1, BMPR1B with a NS-Forest FBeta value of 0.675117924528302s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/da6215c4-7a9c-4e65-87af-7c7742209017", + "id": "http://example.org/d7a47e62-a10b-5e77-a89f-29495a99af36", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001142" + "val": "http://purl.obolibrary.org/obo/CLM_1001212" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -791044,22 +790837,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Lamp5_7" + "val": "Vip_3" } ], "comments": [ - "A Lamp5_7 in the Human Brain has the gene markers MYH11, MT-ND4L, KIT with a NS-Forest FBeta value of 0.42241379310344834s." + "A Vip_3 in the Human Brain has the gene markers HPSE2, TRPC6, VIP with a NS-Forest FBeta value of 0.40249999999999997s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/db46e30c-cb4e-4bb6-9665-3a28f4fe5bb3", + "id": "http://example.org/d915b34b-787f-5d3d-afa9-62adfd300f65", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001138" + "val": "http://purl.obolibrary.org/obo/CLM_1000077" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -791067,22 +790860,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Lamp5_3" + "val": "OPC" } ], "comments": [ - "A Lamp5_3 in the Human Brain has the gene markers CA2, CPLX3, LAMP5 with a NS-Forest FBeta value of 0.6311576354679802s." + "A OPC in the Human Brain has the gene markers FERMT1 with a NS-Forest FBeta value of 0.741071429s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/dc0eae21-4900-4745-a48e-f2d173aa4ba2", + "id": "http://example.org/da5fd9ef-c68a-5af2-9262-7a622fc4e53f", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000085" + "val": "http://purl.obolibrary.org/obo/CLM_1001209" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -791090,22 +790883,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Vip" + "val": "VLMC_2" } ], "comments": [ - "A Vip in the Human Brain has the gene markers VIP with a NS-Forest FBeta value of 0.855531344s." + "A VLMC_2 in the Human Brain has the gene markers SLC19A1, COLEC12 with a NS-Forest FBeta value of 0.876753507014028s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/dd133cc7-2339-486d-876d-4f35d74db39b", + "id": "http://example.org/dafae1b1-e6e8-5c32-80fb-74144a827dee", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001180" + "val": "http://purl.obolibrary.org/obo/CLM_1001202" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -791113,22 +790906,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst_10" + "val": "Sst_32" } ], "comments": [ - "A Sst_10 in the Human Brain has the gene markers HPSE2, EYA4, SST, PLCH1 with a NS-Forest FBeta value of 0.3615384615384615s." + "A Sst_32 in the Human Brain has the gene markers HPGD, PENK, EYA2 with a NS-Forest FBeta value of 0.40567282321899734s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/df6d8651-e642-45fa-9fa9-eeb9ea209de1", + "id": "http://example.org/db32bc1e-fdfe-549b-a613-ebd0592bd1a9", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000009" + "val": "http://purl.obolibrary.org/obo/CLM_1000065" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -791136,22 +790929,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "AT2" + "val": "L2/3 IT" } ], "comments": [ - "A AT2 in the Human Lung has the gene markers SFTPA1 with a NS-Forest FBeta value of 0.95s." + "A L2/3 IT in the Human Brain has the gene markers ONECUT2, COL5A2 with a NS-Forest FBeta value of 0.670149932s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/e0033d29-f8a7-4a49-90b5-06ba09e3dbf0", + "id": "http://example.org/dc59eae8-c453-5aea-bef9-68f7ed66d8c6", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001224" + "val": "http://purl.obolibrary.org/obo/CLM_1001118" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -791159,22 +790952,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Vip_15" + "val": "L5/6 NP_3" } ], "comments": [ - "A Vip_15 in the Human Brain has the gene markers SVIL, VIP with a NS-Forest FBeta value of 0.6172360248447205s." + "A L5/6 NP_3 in the Human Brain has the gene markers NPSR1-AS1, PLPP3, KIT with a NS-Forest FBeta value of 0.5273892773892773s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/e027a73f-c419-4e79-9bd3-39126ef0d574", + "id": "http://example.org/dc7538c4-8653-56d0-ba33-d27accf78c6e", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001109" + "val": "http://purl.obolibrary.org/obo/CLM_1001230" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -791182,22 +790975,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "L5 ET_4" + "val": "Vip_21" } ], "comments": [ - "A L5 ET_4 in the Human Brain has the gene markers EHF, FGF11 with a NS-Forest FBeta value of 0.7297605473204105s." + "A Vip_21 in the Human Brain has the gene markers ALDH1A2, ROR2 with a NS-Forest FBeta value of 0.6180811808118081s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/e167f812-f5c0-4130-acde-87a6f6279d72", + "id": "http://example.org/dcb66de1-d33e-570b-879b-57717a6009d1", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001213" + "val": "http://purl.obolibrary.org/obo/CLM_1001168" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -791205,22 +790998,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Vip_4" + "val": "Sncg_7" } ], "comments": [ - "A Vip_4 in the Human Brain has the gene markers WNT5A, ABI3BP, VCAN with a NS-Forest FBeta value of 0.546875s." + "A Sncg_7 in the Human Brain has the gene markers HTR3A, SYT9, MCTP2 with a NS-Forest FBeta value of 0.7097791798107256s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/e1b4b3fc-3fc2-4a55-82b9-1f5f23d956ed", + "id": "http://example.org/dd13ce9f-9057-5126-9f73-dbe6290d6061", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001119" + "val": "http://purl.obolibrary.org/obo/CLM_1001111" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -791228,22 +791021,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "L5/6 NP_4" + "val": "L5 IT_2" } ], "comments": [ - "A L5/6 NP_4 in the Human Brain has the gene markers FSHR, CLMN, TLL1 with a NS-Forest FBeta value of 0.740632318501171s." + "A L5 IT_2 in the Human Brain has the gene markers NPY2R, PCED1B, TLL1, RORB with a NS-Forest FBeta value of 0.5685240963855422s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/e208050d-fe54-4bff-875b-43f77d17bf51", + "id": "http://example.org/de0baa56-5512-5033-9a4e-998671328697", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000017" + "val": "http://purl.obolibrary.org/obo/CLM_1001139" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -791251,22 +791044,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Club (non-nasal)" + "val": "Lamp5_4" } ], "comments": [ - "A Club (non-nasal) in the Human Lung has the gene markers CYP2F1, SCGB1A1 with a NS-Forest FBeta value of 0.68s." + "A Lamp5_4 in the Human Brain has the gene markers ROR2, TRPC3, FBXL7, LINC00298 with a NS-Forest FBeta value of 0.40425531914893614s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/e3576779-5afa-46ee-8a6c-ca581aaa0c7d", + "id": "http://example.org/df391a0c-4270-583f-bcf0-944afbf52db6", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001214" + "val": "http://purl.obolibrary.org/obo/CLM_1001124" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -791274,22 +791067,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Vip_5" + "val": "L6 CT_3" } ], "comments": [ - "A Vip_5 in the Human Brain has the gene markers LINC01630, IQGAP2, THSD4 with a NS-Forest FBeta value of 0.4801324503311257s." + "A L6 CT_3 in the Human Brain has the gene markers SULF1, MEIS2, ADAMTSL1, KCNH5 with a NS-Forest FBeta value of 0.632267441860465s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/e3b0c7a0-dbd4-4ae7-8890-400d4164bb0d", + "id": "http://example.org/e07acbf2-4011-512f-953d-f23974a17cef", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001194" + "val": "http://purl.obolibrary.org/obo/CLM_1001175" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -791297,22 +791090,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst_24" + "val": "Sst_5" } ], "comments": [ - "A Sst_24 in the Human Brain has the gene markers NDST4, BMP6, MYO5B with a NS-Forest FBeta value of 0.37790697674418605s." + "A Sst_5 in the Human Brain has the gene markers SH3RF2, NPY, CALB1 with a NS-Forest FBeta value of 0.5248833592534992s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/e48cf0e4-e156-4d71-929e-8f0bc8d4ed88", + "id": "http://example.org/e1311248-e8ee-50b4-9848-72e586bd0c96", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001208" + "val": "http://purl.obolibrary.org/obo/CLM_1001090" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -791320,22 +791113,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "VLMC_1" + "val": "Astro_5" } ], "comments": [ - "A VLMC_1 in the Human Brain has the gene markers TAGLN, ACTA2 with a NS-Forest FBeta value of 0.8559498956158662s." + "A Astro_5 in the Human Brain has the gene markers TNC, CD44 with a NS-Forest FBeta value of 0.7512626262626262s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/e4c9cbe4-7822-4d73-ae81-bdb9ce5a47b8", + "id": "http://example.org/e223a1c4-1b0f-5d64-a3d3-4df361a8ffa7", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000039" + "val": "http://purl.obolibrary.org/obo/CLM_1001133" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -791343,22 +791136,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Monocyte-derived Mph" + "val": "L6b_5" } ], "comments": [ - "A Monocyte-derived Mph in the Human Lung has the gene markers C15orf48, CD68 with a NS-Forest FBeta value of 0.37s." + "A L6b_5 in the Human Brain has the gene markers NXPH4, NR4A2, SEMA3E with a NS-Forest FBeta value of 0.5693519079345852s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/e4cc6ff8-e09e-4837-9e4a-6220471561aa", + "id": "http://example.org/e24a2817-5270-5878-9aa8-f0b6beef8447", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001196" + "val": "http://purl.obolibrary.org/obo/CLM_1001116" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -791366,22 +791159,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst_26" + "val": "L5/6 NP_1" } ], "comments": [ - "A Sst_26 in the Human Brain has the gene markers MME, FBN2, MCUB with a NS-Forest FBeta value of 0.2326233183856502s." + "A L5/6 NP_1 in the Human Brain has the gene markers BARX2, CD36, NPSR1-AS1 with a NS-Forest FBeta value of 0.49025974025974034s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/e51c03ab-4861-46cd-9b48-628154bcd1ef", + "id": "http://example.org/e2cc2c8e-db8e-5789-a248-c2a5483a8bb2", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001137" + "val": "http://purl.obolibrary.org/obo/CLM_1000064" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -791389,22 +791182,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Lamp5_2" + "val": "Endo" } ], "comments": [ - "A Lamp5_2 in the Human Brain has the gene markers PBX3, KIT with a NS-Forest FBeta value of 0.7316272965879266s." + "A Endo in the Human Brain has the gene markers FLT1, ABCG2 with a NS-Forest FBeta value of 0.923892465s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/e574def7-fbe8-4797-99c8-108077aaa3e3", + "id": "http://example.org/e38bc3d0-438b-593e-aa63-8c8f83a5e13f", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001185" + "val": "http://purl.obolibrary.org/obo/CLM_1001126" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -791412,22 +791205,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst_15" + "val": "L6 IT Car3_2" } ], "comments": [ - "A Sst_15 in the Human Brain has the gene markers DPP4, EPB41L4A, FREM1, PLCH1 with a NS-Forest FBeta value of 0.45995670995671s." + "A L6 IT Car3_2 in the Human Brain has the gene markers SMYD1, ITGB8 with a NS-Forest FBeta value of 0.6594036697247707s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/e5ccdcff-a98b-4199-8733-0e5f8325eb7d", + "id": "http://example.org/e3ae895c-234b-5acb-8098-3be1f2547bdc", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001182" + "val": "http://purl.obolibrary.org/obo/CLM_1001206" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -791435,22 +791228,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst_12" + "val": "Sst_36" } ], "comments": [ - "A Sst_12 in the Human Brain has the gene markers CBLN4, SLC24A4, EYS, PLCH1 with a NS-Forest FBeta value of 0.34348441926345613s." + "A Sst_36 in the Human Brain has the gene markers TRDN, ITGA1, PARD3B, PLCH1 with a NS-Forest FBeta value of 0.6381381381381382s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/e62ca0d3-edde-4ea2-b39b-ba66f9f0e47a", + "id": "http://example.org/e3e346f1-ea9d-598d-b3d8-e6cd221d772a", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001129" + "val": "http://purl.obolibrary.org/obo/CLM_1001149" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -791458,22 +791251,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "L6b_1" + "val": "Pax6_1" } ], "comments": [ - "A L6b_1 in the Human Brain has the gene markers SEMA3D, ITGA11, FAM160A1 with a NS-Forest FBeta value of 0.5724637681159421s." + "A Pax6_1 in the Human Brain has the gene markers IGFBP7, EPS8, HCRTR2 with a NS-Forest FBeta value of 0.767426273458445s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/e83996b8-3411-4196-90db-fb63059e393a", + "id": "http://example.org/e4188468-9007-526c-b78f-834749707933", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001131" + "val": "http://purl.obolibrary.org/obo/CLM_1001175" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -791481,22 +791274,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "L6b_3" + "val": "Sst_5" } ], "comments": [ - "A L6b_3 in the Human Brain has the gene markers SLC15A5, ATP10A with a NS-Forest FBeta value of 0.6928969359331476s." + "A Sst_5 in the Human Brain has the gene markers SH3RF2, NPY, CALB1 with a NS-Forest FBeta value of 0.5248833592534992s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/e8cacf2f-536b-4d76-9550-f917a4999aa4", + "id": "http://example.org/e4bfff20-3913-5c68-b3d2-facd70233707", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001189" + "val": "http://purl.obolibrary.org/obo/CLM_1001200" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -791504,22 +791297,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst_19" + "val": "Sst_30" } ], "comments": [ - "A Sst_19 in the Human Brain has the gene markers EPB41L4A, GPC5, PLCH1 with a NS-Forest FBeta value of 0.7339449541284404s." + "A Sst_30 in the Human Brain has the gene markers NOTCH2, HTR2C, FBN2 with a NS-Forest FBeta value of 0.4063786008230453s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/e8dbf5b7-e87a-43b9-aa4b-61806785d747", + "id": "http://example.org/e52b9e49-7c8b-5d77-a2dd-255b2bea3ea7", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001218" + "val": "http://purl.obolibrary.org/obo/CLM_1001192" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -791527,22 +791320,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Vip_9" + "val": "Sst_22" } ], "comments": [ - "A Vip_9 in the Human Brain has the gene markers SLC7A11, TNS3, PPP1R1C, COBLL1 with a NS-Forest FBeta value of 0.48302107728337235s." + "A Sst_22 in the Human Brain has the gene markers EPB41L4A, ITGA8, SST with a NS-Forest FBeta value of 0.4351032448377581s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/e8f4438d-8d50-46a5-addd-1cc220b445de", + "id": "http://example.org/e6363434-6e93-5d89-8bb3-852e6c93581f", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001153" + "val": "http://purl.obolibrary.org/obo/CLM_1001177" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -791550,22 +791343,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Pvalb_1" + "val": "Sst_7" } ], "comments": [ - "A Pvalb_1 in the Human Brain has the gene markers MYBPC1, GPR149, SVIL with a NS-Forest FBeta value of 0.6944444444444444s." + "A Sst_7 in the Human Brain has the gene markers EPSTI1, PIEZO2, HPSE2, PLCH1 with a NS-Forest FBeta value of 0.4469696969696969s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/e96f493f-a505-47d9-a68f-af359b4dc020", + "id": "http://example.org/e6389f82-51ed-56af-b851-de611ec1e0d3", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000024" + "val": "http://purl.obolibrary.org/obo/CLM_1000073" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -791573,22 +791366,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "EC venous pulmonary" + "val": "L6b" } ], "comments": [ - "A EC venous pulmonary in the Human Lung has the gene markers ACKR1, SRPX with a NS-Forest FBeta value of 0.74s." + "A L6b in the Human Brain has the gene markers CCN2, ROS1 with a NS-Forest FBeta value of 0.819940964s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/ea25033b-4545-4209-bd16-f72f14203dbc", + "id": "http://example.org/e6a6aa88-bda1-5b17-9408-c3d250371609", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001232" + "val": "http://purl.obolibrary.org/obo/CLM_1001164" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -791596,22 +791389,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Vip_23" + "val": "Sncg_3" } ], "comments": [ - "A Vip_23 in the Human Brain has the gene markers KCNH8, EDNRA, KMO with a NS-Forest FBeta value of 0.54251269035533s." + "A Sncg_3 in the Human Brain has the gene markers SEMA3C, MYO1B, VAV3 with a NS-Forest FBeta value of 0.4528985507246377s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/eacd3042-3c6d-4d4f-9f4e-1c4d9deecd1d", + "id": "http://example.org/e7098671-5ba6-54d3-87f1-b989a44f9b69", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001172" + "val": "http://purl.obolibrary.org/obo/CLM_1000070" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -791619,22 +791412,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst_2" + "val": "L6 CT" } ], "comments": [ - "A Sst_2 in the Human Brain has the gene markers HPGD, RGS5_ENSG00000143248, SPON1 with a NS-Forest FBeta value of 0.5613577023498695s." + "A L6 CT in the Human Brain has the gene markers SEMA5B, ADAMTSL1, SULF1 with a NS-Forest FBeta value of 0.631898455s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/eb322609-ad07-45c9-872d-89a97e74b01e", + "id": "http://example.org/e7436099-04f1-5cdb-adc7-634d07537c7b", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000080" + "val": "http://purl.obolibrary.org/obo/CLM_1001208" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -791642,22 +791435,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Pvalb" + "val": "VLMC_1" } ], "comments": [ - "A Pvalb in the Human Brain has the gene markers PVALB, TAC1, MYO5B with a NS-Forest FBeta value of 0.691998764s." + "A VLMC_1 in the Human Brain has the gene markers TAGLN, ACTA2 with a NS-Forest FBeta value of 0.8559498956158662s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/ec4ae2f2-2216-44b7-aa0b-d0ee7fa12bca", + "id": "http://example.org/eb19c81d-5518-5313-bd59-c261e11e9122", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000060" + "val": "http://purl.obolibrary.org/obo/CLM_1001198" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -791665,22 +791458,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "T cells proliferating" + "val": "Sst_28" } ], "comments": [ - "A T cells proliferating in the Human Lung has the gene markers CD3G, MKI67, PCLAF, CD3E with a NS-Forest FBeta value of 0.71s." + "A Sst_28 in the Human Brain has the gene markers PROM1, NDST4, TRPC6 with a NS-Forest FBeta value of 0.5884615384615385s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/ed2f64cf-98e5-4029-9027-c4ce6616793e", + "id": "http://example.org/ed42b487-4059-554f-87f8-4487017d3896", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001200" + "val": "http://purl.obolibrary.org/obo/CLM_1001151" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -791688,22 +791481,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst_30" + "val": "Pax6_3" } ], "comments": [ - "A Sst_30 in the Human Brain has the gene markers NOTCH2, HTR2C, FBN2 with a NS-Forest FBeta value of 0.4063786008230453s." + "A Pax6_3 in the Human Brain has the gene markers PBX3, PDLIM5, FBN2 with a NS-Forest FBeta value of 0.7090163934426228s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/f07984d6-a208-4758-b07b-c09c35692989", + "id": "http://example.org/ee0a1886-c424-5ef6-b30b-2f3f29c381ad", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001121" + "val": "http://purl.obolibrary.org/obo/CLM_1001095" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -791711,22 +791504,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "L5/6 NP_6" + "val": "L2/3 IT_2" } ], "comments": [ - "A L5/6 NP_6 in the Human Brain has the gene markers NPSR1-AS1, ARHGAP42 with a NS-Forest FBeta value of 0.7685614849187936s." + "A L2/3 IT_2 in the Human Brain has the gene markers THSD4, TESPA1, TRPC3 with a NS-Forest FBeta value of 0.6621140142517815s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/f0afb72a-6110-44e3-8279-908c10d22540", + "id": "http://example.org/ef5f2707-c50d-5da2-910c-55c1a4f67433", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001177" + "val": "http://purl.obolibrary.org/obo/CLM_1001194" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -791734,22 +791527,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst_7" + "val": "Sst_24" } ], "comments": [ - "A Sst_7 in the Human Brain has the gene markers EPSTI1, PIEZO2, HPSE2, PLCH1 with a NS-Forest FBeta value of 0.4469696969696969s." + "A Sst_24 in the Human Brain has the gene markers NDST4, BMP6, MYO5B with a NS-Forest FBeta value of 0.37790697674418605s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/f2b14676-6896-4bdc-ba56-98ca3b38466f", + "id": "http://example.org/efad084b-98ab-540f-9bb9-53daaaf32c4e", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001117" + "val": "http://purl.obolibrary.org/obo/CLM_1001212" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -791757,22 +791550,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "L5/6 NP_2" + "val": "Vip_3" } ], "comments": [ - "A L5/6 NP_2 in the Human Brain has the gene markers SLC17A6, CRYM with a NS-Forest FBeta value of 0.4607508532423208s." + "A Vip_3 in the Human Brain has the gene markers HPSE2, TRPC6, VIP with a NS-Forest FBeta value of 0.40249999999999997s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/f33fb9fe-c03c-42a3-b025-9492d41846ca", + "id": "http://example.org/f17e7ae2-a36c-53cf-9073-38e299846def", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001136" + "val": "http://purl.obolibrary.org/obo/CLM_1001206" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -791780,22 +791573,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Lamp5_1" + "val": "Sst_36" } ], "comments": [ - "A Lamp5_1 in the Human Brain has the gene markers ADAMTS20, KIT, FREM1 with a NS-Forest FBeta value of 0.48856548856548865s." + "A Sst_36 in the Human Brain has the gene markers TRDN, ITGA1, PARD3B, PLCH1 with a NS-Forest FBeta value of 0.6381381381381382s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/f5ad64f1-2724-4897-9806-2b62077b3e1c", + "id": "http://example.org/f40cee6f-ddb4-590e-ba32-c8508cb1dc3b", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001132" + "val": "http://purl.obolibrary.org/obo/CLM_1001223" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -791803,22 +791596,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "L6b_4" + "val": "Vip_14" } ], "comments": [ - "A L6b_4 in the Human Brain has the gene markers NR4A2, ATP8B4 with a NS-Forest FBeta value of 0.5812101910828025s." + "A Vip_14 in the Human Brain has the gene markers ST18, KCNH8, CA10, VIP with a NS-Forest FBeta value of 0.5968468468468467s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/f5cab1b7-d139-4503-a17b-8a3f7caa68b2", + "id": "http://example.org/f4619e6f-b495-5aeb-93d9-1e724575db7b", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001205" + "val": "http://purl.obolibrary.org/obo/CLM_1001113" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -791826,22 +791619,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst_35" + "val": "L5 IT_4" } ], "comments": [ - "A Sst_35 in the Human Brain has the gene markers ACVR1C, EYA2, TRIM67 with a NS-Forest FBeta value of 0.5226480836236933s." + "A L5 IT_4 in the Human Brain has the gene markers C22orf34, LDLRAD3, RORB, KCNK2 with a NS-Forest FBeta value of 0.44211195928753183s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/f64a9d59-af5e-4bb3-a4e7-53a5b535d7b5", + "id": "http://example.org/f4c18ae3-2790-5f09-9f80-f47c7db0e06d", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001218" + "val": "http://purl.obolibrary.org/obo/CLM_1001170" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -791849,22 +791642,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Vip_9" + "val": "Sst Chodl_1" } ], "comments": [ - "A Vip_9 in the Human Brain has the gene markers SLC7A11, TNS3, PPP1R1C, COBLL1 with a NS-Forest FBeta value of 0.48302107728337235s." + "A Sst Chodl_1 in the Human Brain has the gene markers NPY with a NS-Forest FBeta value of 0.894026186579378s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/f6c7b34d-eaaf-42ec-a4d7-f1d85b011c0f", + "id": "http://example.org/f4e3af37-4b86-588d-8580-20ab70350b57", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001147" + "val": "http://purl.obolibrary.org/obo/CLM_1001139" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -791872,22 +791665,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Oligo_3" + "val": "Lamp5_4" } ], "comments": [ - "A Oligo_3 in the Human Brain has the gene markers OPALIN, LINC01170 with a NS-Forest FBeta value of 0.713610586011342s." + "A Lamp5_4 in the Human Brain has the gene markers ROR2, TRPC3, FBXL7, LINC00298 with a NS-Forest FBeta value of 0.40425531914893614s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/f7ade78b-3994-4972-ac3a-f36cf9431404", + "id": "http://example.org/f5aa7213-1655-57ae-b2d3-2e47cdd699e7", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001207" + "val": "http://purl.obolibrary.org/obo/CLM_1001127" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -791895,22 +791688,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst_37" + "val": "L6 IT_1" } ], "comments": [ - "A Sst_37 in the Human Brain has the gene markers PROM1, CRHBP, SST with a NS-Forest FBeta value of 0.5s." + "A L6 IT_1 in the Human Brain has the gene markers THEMIS, HOPX, MKX with a NS-Forest FBeta value of 0.6710122699386504s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/f8b95da8-0a30-4d21-8f8b-7d1d7700ae88", + "id": "http://example.org/f8eaa8fd-02bf-5938-8c56-ee74f33fdd0a", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000077" + "val": "http://purl.obolibrary.org/obo/CLM_1001202" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -791918,22 +791711,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "OPC" + "val": "Sst_32" } ], "comments": [ - "A OPC in the Human Brain has the gene markers FERMT1 with a NS-Forest FBeta value of 0.741071429s." + "A Sst_32 in the Human Brain has the gene markers HPGD, PENK, EYA2 with a NS-Forest FBeta value of 0.40567282321899734s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/f9d30080-627d-4bfd-8950-cd6755b7f685", + "id": "http://example.org/fa2356b6-e279-54ef-840b-9ab62a3b9793", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001116" + "val": "http://purl.obolibrary.org/obo/CLM_1001123" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -791941,22 +791734,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "L5/6 NP_1" + "val": "L6 CT_2" } ], "comments": [ - "A L5/6 NP_1 in the Human Brain has the gene markers BARX2, CD36, NPSR1-AS1 with a NS-Forest FBeta value of 0.49025974025974034s." + "A L6 CT_2 in the Human Brain has the gene markers SYT6, ITGA11, SEMA5B with a NS-Forest FBeta value of 0.791868932038835s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/fa92a775-679a-4b07-bcce-0bd5a44d4307", + "id": "http://example.org/fa3519de-625e-58ad-8090-47ecd59e4c78", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001167" + "val": "http://purl.obolibrary.org/obo/CLM_1001222" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -791964,22 +791757,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sncg_6" + "val": "Vip_13" } ], "comments": [ - "A Sncg_6 in the Human Brain has the gene markers THSD7B, ADAMTSL1, RELN with a NS-Forest FBeta value of 0.5738434163701067s." + "A Vip_13 in the Human Brain has the gene markers ST18, PTGDS, VIP with a NS-Forest FBeta value of 0.42776639344262285s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/fb64acf9-51f0-426a-a485-ce36cbf7c7e2", + "id": "http://example.org/fa40cb41-333e-57de-a6f6-b91d9c36d80a", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001122" + "val": "http://purl.obolibrary.org/obo/CLM_1000084" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -791987,22 +791780,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "L6 CT_1" + "val": "VLMC" } ], "comments": [ - "A L6 CT_1 in the Human Brain has the gene markers LGR6, OR1Q1, SULF1 with a NS-Forest FBeta value of 0.665374677002584s." + "A VLMC in the Human Brain has the gene markers CARMN with a NS-Forest FBeta value of 0.863105175s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/fb9540fc-84b9-4e2e-a6fb-f46580892354", + "id": "http://example.org/fb2b7612-a242-51e3-a932-bf1ae7e35fb1", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001193" + "val": "http://purl.obolibrary.org/obo/CLM_1001105" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -792010,22 +791803,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst_23" + "val": "L4 IT_6" } ], "comments": [ - "A Sst_23 in the Human Brain has the gene markers NIBAN1, PROM1, THSD7B with a NS-Forest FBeta value of 0.6134686346863469s." + "A L4 IT_6 in the Human Brain has the gene markers PLEKHH2, CLMN, ST8SIA4 with a NS-Forest FBeta value of 0.6703910614525139s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/fceedb33-231b-4d01-a463-696faed0af93", + "id": "http://example.org/fc6aa65a-c788-5452-849b-973fc2821a29", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001162" + "val": "http://purl.obolibrary.org/obo/CLM_1001107" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -792033,22 +791826,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sncg_1" + "val": "L5 ET_2" } ], "comments": [ - "A Sncg_1 in the Human Brain has the gene markers UNC5B, TAFA4, THSD7B with a NS-Forest FBeta value of 0.5883947939262474s." + "A L5 ET_2 in the Human Brain has the gene markers ATP6V1C2, LRP2, ST8SIA2 with a NS-Forest FBeta value of 0.7593749999999999s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/fd550edc-0e7e-4bc2-b4ec-f22f7fb4e9b4", + "id": "http://example.org/fe10caee-1f72-5d67-a625-225076d029bb", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001130" + "val": "http://purl.obolibrary.org/obo/CLM_1001138" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -792056,22 +791849,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "L6b_2" + "val": "Lamp5_3" } ], "comments": [ - "A L6b_2 in the Human Brain has the gene markers NPFFR2, ROS1 with a NS-Forest FBeta value of 0.565711462450593s." + "A Lamp5_3 in the Human Brain has the gene markers CA2, CPLX3, LAMP5 with a NS-Forest FBeta value of 0.6311576354679802s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/fde22c9c-eeb9-4300-89dd-478c36471def", + "id": "http://example.org/fe441b57-f2bd-5134-a6b5-d513e3cfc7bc", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000061" + "val": "http://purl.obolibrary.org/obo/CLM_1001236" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -792079,22 +791872,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Tuft" + "val": "Vip_27" } ], "comments": [ - "A Tuft in the Human Lung has the gene markers POU2F3, HOMER3, MYB with a NS-Forest FBeta value of 0.56s." + "A Vip_27 in the Human Brain has the gene markers DACH2, CHRNA7, MIR4500HG, VIP with a NS-Forest FBeta value of 0.5466778805719091s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/fe28676e-2945-42a1-80dc-af999e68c0ad", + "id": "http://example.org/feb7b953-4de0-59a5-903c-e7bf6e0a3577", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1000073" + "val": "http://purl.obolibrary.org/obo/CLM_1001159" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -792102,22 +791895,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "L6b" + "val": "Pvalb_7" } ], "comments": [ - "A L6b in the Human Brain has the gene markers CCN2, ROS1 with a NS-Forest FBeta value of 0.819940964s." + "A Pvalb_7 in the Human Brain has the gene markers SULF1, ZNF385D-AS2 with a NS-Forest FBeta value of 0.5650087260034904s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/ff92840f-3be0-4810-94ae-a61109c9bdab", + "id": "http://example.org/febe7cb8-6115-592d-b2ee-aa2c8bfcc5dc", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001202" + "val": "http://purl.obolibrary.org/obo/CLM_1001147" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -792125,22 +791918,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Sst_32" + "val": "Oligo_3" } ], "comments": [ - "A Sst_32 in the Human Brain has the gene markers HPGD, PENK, EYA2 with a NS-Forest FBeta value of 0.40567282321899734s." + "A Oligo_3 in the Human Brain has the gene markers OPALIN, LINC01170 with a NS-Forest FBeta value of 0.713610586011342s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/ffbfb350-4e48-4f7d-99fa-f4c23e3d058e", + "id": "http://example.org/ffb69102-f8f2-59a7-b585-a26138c298b5", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001086" + "val": "http://purl.obolibrary.org/obo/CLM_1001220" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -792148,22 +791941,22 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "Astro_1" + "val": "Vip_11" } ], "comments": [ - "A Astro_1 in the Human Brain has the gene markers SLC1A3, HPSE2 with a NS-Forest FBeta value of 0.6796875s." + "A Vip_11 in the Human Brain has the gene markers ABI3BP, MCTP2, SLC22A3, PROS1 with a NS-Forest FBeta value of 0.43523676880222845s." ] }, "type": "INDIVIDUAL" }, { - "id": "http://example.org/ffe2a345-c5e8-4788-9262-c92cb4fa5338", + "id": "http://example.org/fff6bb7f-da2d-5371-981c-bb398c4140d3", "meta": { "basicPropertyValues": [ { "pred": "http://purl.obolibrary.org/obo/CLM_0010000", - "val": "http://purl.obolibrary.org/obo/CLM_1001130" + "val": "http://purl.obolibrary.org/obo/CLM_1001182" }, { "pred": "http://purl.obolibrary.org/obo/RO_0002175", @@ -792171,11 +791964,11 @@ }, { "pred": "http://www.w3.org/2004/02/skos/core#prefLabel", - "val": "L6b_2" + "val": "Sst_12" } ], "comments": [ - "A L6b_2 in the Human Brain has the gene markers NPFFR2, ROS1 with a NS-Forest FBeta value of 0.565711462450593s." + "A Sst_12 in the Human Brain has the gene markers CBLN4, SLC24A4, EYS, PLCH1 with a NS-Forest FBeta value of 0.34348441926345613s." ] }, "type": "INDIVIDUAL" diff --git a/clm-kg.obo b/clm-kg.obo index 1c8792d..3ff6826 100644 --- a/clm-kg.obo +++ b/clm-kg.obo @@ -1,5 +1,5 @@ format-version: 1.2 -data-version: clm/releases/2024-12-02/clm-kg.owl +data-version: clm/releases/2024-12-12/clm-kg.owl idspace: dce http://purl.org/dc/elements/1.1/ idspace: dcterms http://purl.org/dc/terms/ idspace: oboInOwl http://www.geneontology.org/formats/oboInOwl# @@ -9,7 +9,7 @@ property_value: dce:type IAO:8000001 property_value: dcterms:description "None" xsd:string property_value: dcterms:license https://creativecommons.org/licenses/unspecified property_value: dcterms:title "Cell Markers Ontology" xsd:string -property_value: owl:versionInfo "2024-12-02" xsd:string +property_value: owl:versionInfo "2024-12-12" xsd:string [Term] id: CL:0000583 @@ -13429,8 +13429,8 @@ is_a: PR:000000001 property_value: IAO:0000028 "Utrn" xsd:string property_value: RO:0001025 GO:0031594 {evidence="IDA", xref="PMID:1461282"} property_value: RO:0001025 GO:0031594 {evidence="IDA", xref="PMID:17119023"} -property_value: RO:0001025 GO:0031594 {evidence="IDA", xref="PMID:9674605"} property_value: RO:0001025 GO:0031594 {evidence="IDA", xref="PMID:12808150"} +property_value: RO:0001025 GO:0031594 {evidence="IDA", xref="PMID:9674605"} property_value: RO:0001025 GO:0042383 {evidence="IDA", xref="PMID:12808150"} property_value: RO:0002162 NCBITaxon:10090 @@ -13472,8 +13472,8 @@ is_a: PR:000000001 property_value: IAO:0000028 "Utrn" xsd:string property_value: RO:0001025 GO:0031594 {evidence="IDA", xref="PMID:1461282"} property_value: RO:0001025 GO:0031594 {evidence="IDA", xref="PMID:17119023"} -property_value: RO:0001025 GO:0031594 {evidence="IDA", xref="PMID:9674605"} property_value: RO:0001025 GO:0031594 {evidence="IDA", xref="PMID:12808150"} +property_value: RO:0001025 GO:0031594 {evidence="IDA", xref="PMID:9674605"} property_value: RO:0001025 GO:0042383 {evidence="IDA", xref="PMID:12808150"} property_value: RO:0002162 NCBITaxon:10090 @@ -30511,15 +30511,15 @@ name: Cilia- and flagella- associated protein 210 is_a: PR:000000001 property_value: IAO:0000028 "Cfap210" xsd:string property_value: RO:0002162 NCBITaxon:10090 -property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37865089"} property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37989994"} +property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37865089"} property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37295417"} property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37295417"} property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37989994"} property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37865089"} property_value: RO:0002432 GO:0160112 {evidence="IDA", xref="PMID:37295417"} -property_value: RO:0002432 GO:0160112 {evidence="IDA", xref="PMID:37989994"} property_value: RO:0002432 GO:0160112 {evidence="IDA", xref="PMID:37865089"} +property_value: RO:0002432 GO:0160112 {evidence="IDA", xref="PMID:37989994"} [Term] id: https://identifiers.org/uniprot:A0JNT9 @@ -31488,8 +31488,8 @@ id: https://identifiers.org/uniprot:A2ABU4 name: Myomesin-3 is_a: PR:000000001 property_value: IAO:0000028 "Myom3" xsd:string -property_value: RO:0001025 GO:0031430 {evidence="IDA", xref="PMID:20215401"} property_value: RO:0001025 GO:0031430 {evidence="IDA", xref="PMID:18177667"} +property_value: RO:0001025 GO:0031430 {evidence="IDA", xref="PMID:20215401"} property_value: RO:0001025 GO:0031430 {evidence="IDA", xref="PMID:22562206"} property_value: RO:0002162 NCBITaxon:10090 @@ -33554,8 +33554,8 @@ name: Tektin bundle-interacting protein 1 is_a: PR:000000001 property_value: IAO:0000028 "Tektip1" xsd:string property_value: RO:0002162 NCBITaxon:10090 -property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37989994"} property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37865089"} +property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37989994"} property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37295417"} property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37295417"} property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37989994"} @@ -54356,8 +54356,8 @@ is_a: PR:000000001 property_value: IAO:0000028 "Utrn" xsd:string property_value: RO:0001025 GO:0031594 {evidence="IDA", xref="PMID:1461282"} property_value: RO:0001025 GO:0031594 {evidence="IDA", xref="PMID:17119023"} -property_value: RO:0001025 GO:0031594 {evidence="IDA", xref="PMID:9674605"} property_value: RO:0001025 GO:0031594 {evidence="IDA", xref="PMID:12808150"} +property_value: RO:0001025 GO:0031594 {evidence="IDA", xref="PMID:9674605"} property_value: RO:0001025 GO:0042383 {evidence="IDA", xref="PMID:12808150"} property_value: RO:0002162 NCBITaxon:10090 @@ -54729,8 +54729,8 @@ property_value: RO:0002264 GO:0007338 {evidence="IMP", xref="PMID:38038747"} property_value: RO:0002264 GO:0030317 {evidence="IMP", xref="PMID:35451961"} property_value: RO:0002264 GO:0120316 {evidence="IMP", xref="PMID:38038747"} property_value: RO:0002264 GO:1905198 {evidence="IMP", xref="PMID:38038747"} -property_value: RO:0002331 GO:0007286 {evidence="IMP", xref="PMID:38038747"} property_value: RO:0002331 GO:0007286 {evidence="IMP", xref="PMID:38441556"} +property_value: RO:0002331 GO:0007286 {evidence="IMP", xref="PMID:38038747"} property_value: RO:0002331 GO:0007288 {evidence="IMP", xref="PMID:38038747"} property_value: RO:0002331 GO:0120316 {evidence="IMP", xref="PMID:38038747"} property_value: RO:0002331 GO:1905198 {evidence="IMP", xref="PMID:38038747"} @@ -54858,8 +54858,8 @@ is_a: PR:000000001 property_value: IAO:0000028 "Lmod3" xsd:string property_value: RO:0001025 GO:0031672 {evidence="IDA", xref="PMID:24960163"} property_value: RO:0002162 NCBITaxon:10090 -property_value: RO:0002331 GO:0048741 {evidence="IMP", xref="PMID:26035871"} property_value: RO:0002331 GO:0048741 {evidence="IMP", xref="PMID:25774500"} +property_value: RO:0002331 GO:0048741 {evidence="IMP", xref="PMID:26035871"} [Term] id: https://identifiers.org/uniprot:E9QAG8 @@ -57421,8 +57421,8 @@ name: Nucleoprotein TPR is_a: PR:000000001 property_value: BFO:0000050 GO:0005643 {evidence="IDA", xref="PMID:12513910"} property_value: IAO:0000028 "Tpr" xsd:string -property_value: RO:0001025 GO:0005635 {evidence="IDA", xref="PMID:12424524"} property_value: RO:0001025 GO:0005635 {evidence="IDA", xref="PMID:12513910"} +property_value: RO:0001025 GO:0005635 {evidence="IDA", xref="PMID:12424524"} property_value: RO:0001025 GO:0034399 {evidence="IDA", xref="PMID:22401879"} property_value: RO:0001025 GO:0042405 {evidence="IDA", xref="PMID:12513910"} property_value: RO:0002162 NCBITaxon:10090 @@ -60727,8 +60727,8 @@ property_value: RO:0001025 GO:0030672 {evidence="IDA", xref="PMID:30862855"} property_value: RO:0001025 GO:0042734 {evidence="IDA", xref="PMID:30862855"} property_value: RO:0002162 NCBITaxon:10090 property_value: RO:0002331 GO:0003056 {evidence="IMP", xref="PMID:24805951"} -property_value: RO:0002331 GO:0006874 {evidence="IMP", xref="PMID:28827723"} property_value: RO:0002331 GO:0006874 {evidence="IMP", xref="PMID:16956963"} +property_value: RO:0002331 GO:0006874 {evidence="IMP", xref="PMID:28827723"} property_value: RO:0002331 GO:0008217 {evidence="IMP", xref="PMID:22311909"} property_value: RO:0002331 GO:0008217 {evidence="IMP", xref="PMID:24805951"} property_value: RO:0002331 GO:0051480 {evidence="IMP", xref="PMID:24805951"} @@ -71978,8 +71978,8 @@ name: Cytoskeletal protein is_a: PR:000000001 property_value: IAO:0000028 "Utrn" xsd:string property_value: RO:0001025 GO:0031594 {evidence="IDA", xref="PMID:17119023"} -property_value: RO:0001025 GO:0031594 {evidence="IDA", xref="PMID:9674605"} property_value: RO:0001025 GO:0031594 {evidence="IDA", xref="PMID:12808150"} +property_value: RO:0001025 GO:0031594 {evidence="IDA", xref="PMID:9674605"} property_value: RO:0001025 GO:0031594 {evidence="IDA", xref="PMID:1461282"} property_value: RO:0001025 GO:0042383 {evidence="IDA", xref="PMID:12808150"} property_value: RO:0002162 NCBITaxon:10090 @@ -72500,8 +72500,8 @@ property_value: IAO:0000028 "Pkd1" xsd:string property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:15545994"} property_value: RO:0001025 GO:0005783 {evidence="IDA", xref="PMID:25405894"} property_value: RO:0001025 GO:0005794 {evidence="IDA", xref="PMID:25405894"} -property_value: RO:0001025 GO:0005929 {evidence="IDA", xref="PMID:25405894"} property_value: RO:0001025 GO:0005929 {evidence="IDA", xref="PMID:24939912"} +property_value: RO:0001025 GO:0005929 {evidence="IDA", xref="PMID:25405894"} property_value: RO:0001025 GO:0005929 {evidence="IDA", xref="PMID:12514735"} property_value: RO:0001025 GO:0005929 {evidence="IDA", xref="PMID:18285569"} property_value: RO:0001025 GO:0009986 {evidence="IDA", xref="PMID:24939912"} @@ -73051,8 +73051,8 @@ id: https://identifiers.org/uniprot:O14503 name: Class E basic helix-loop-helix protein 40 is_a: PR:000000001 property_value: IAO:0000028 "BHLHE40" xsd:string -property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:28797635"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:12624110"} +property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:28797635"} property_value: RO:0001025 GO:0016604 {evidence="IDA", xref="GO_REF:0000052"} property_value: RO:0002162 NCBITaxon:9606 @@ -73587,8 +73587,8 @@ property_value: RO:0002331 GO:0071333 {evidence="IDA", xref="PMID:19641095"} id: https://identifiers.org/uniprot:O14802 name: DNA-directed RNA polymerase III subunit RPC1 is_a: PR:000000001 -property_value: BFO:0000050 GO:0005666 {evidence="IDA", xref="PMID:24107381"} property_value: BFO:0000050 GO:0005666 {evidence="IDA", xref="PMID:34675218"} +property_value: BFO:0000050 GO:0005666 {evidence="IDA", xref="PMID:24107381"} property_value: BFO:0000050 GO:0005666 {evidence="IDA", xref="PMID:33335104"} property_value: IAO:0000028 "POLR3A" xsd:string property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:11416169"} @@ -73949,8 +73949,8 @@ property_value: RO:0002331 GO:0000054 {evidence="IMP", xref="PMID:12724356"} property_value: RO:0002331 GO:0000055 {evidence="IMP", xref="PMID:12773398"} property_value: RO:0002331 GO:0000056 {evidence="IMP", xref="PMID:12773398"} property_value: RO:0002331 GO:0006611 {evidence="IPI", xref="PMID:29666234"} -property_value: RO:0002331 GO:0006611 {evidence="IDA", xref="PMID:22250199"} property_value: RO:0002331 GO:0006611 {evidence="IDA", xref="PMID:29666234"} +property_value: RO:0002331 GO:0006611 {evidence="IDA", xref="PMID:22250199"} property_value: RO:0002331 GO:0006611 {evidence="IMP", xref="PMID:12773398"} property_value: RO:0002331 GO:0006913 {evidence="IMP", xref="PMID:11000203"} @@ -74197,8 +74197,8 @@ property_value: RO:0001025 GO:0005783 {evidence="IDA", xref="PMID:12554680"} property_value: RO:0001025 GO:0031902 {evidence="IMP", xref="PMID:27378690"} property_value: RO:0002162 NCBITaxon:9606 property_value: RO:0002331 GO:0032365 {evidence="IMP", xref="PMID:27378690"} -property_value: RO:0002331 GO:0032367 {evidence="IMP", xref="PMID:27238017"} property_value: RO:0002331 GO:0032367 {evidence="IMP", xref="PMID:28784760"} +property_value: RO:0002331 GO:0032367 {evidence="IMP", xref="PMID:27238017"} property_value: RO:0002331 GO:0032367 {evidence="IMP", xref="PMID:9211849"} property_value: RO:0002331 GO:0032367 {evidence="IMP", xref="PMID:27378690"} @@ -74302,8 +74302,8 @@ is_a: PR:000000001 property_value: BFO:0000050 GO:0005666 {evidence="IDA", xref="PMID:33335104"} property_value: BFO:0000050 GO:0005666 {evidence="IDA", xref="PMID:24107381"} property_value: BFO:0000050 GO:0005666 {evidence="IDA", xref="PMID:34675218"} -property_value: BFO:0000050 GO:0005736 {evidence="IDA", xref="PMID:36271492"} property_value: BFO:0000050 GO:0005736 {evidence="IDA", xref="PMID:34671025"} +property_value: BFO:0000050 GO:0005736 {evidence="IDA", xref="PMID:36271492"} property_value: IAO:0000028 "POLR1C" xsd:string property_value: RO:0001025 GO:0001650 {evidence="IDA", xref="GO_REF:0000052"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:33335104"} @@ -74702,8 +74702,8 @@ property_value: RO:0002162 NCBITaxon:9606 id: https://identifiers.org/uniprot:O15318 name: DNA-directed RNA polymerase III subunit RPC7 is_a: PR:000000001 -property_value: BFO:0000050 GO:0005666 {evidence="IDA", xref="PMID:34675218"} property_value: BFO:0000050 GO:0005666 {evidence="IDA", xref="PMID:24107381"} +property_value: BFO:0000050 GO:0005666 {evidence="IDA", xref="PMID:34675218"} property_value: BFO:0000050 GO:0005666 {evidence="IDA", xref="PMID:33335104"} property_value: IAO:0000028 "POLR3G" xsd:string property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:20154270"} @@ -74792,8 +74792,8 @@ name: Histone deacetylase 3 is_a: PR:000000001 property_value: BFO:0000050 GO:0000118 {evidence="IDA", xref="PMID:18326024"} property_value: IAO:0000028 "HDAC3" xsd:string -property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:21030595"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:18347167"} +property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:21030595"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:18326024"} property_value: RO:0001025 GO:0005654 {evidence="IDA", xref="GO_REF:0000052"} property_value: RO:0001025 GO:0005794 {evidence="IDA", xref="GO_REF:0000052"} @@ -74944,8 +74944,8 @@ property_value: RO:0001025 GO:0005730 {evidence="IDA", xref="GO_REF:0000052"} property_value: RO:0001025 GO:0005794 {evidence="IDA", xref="GO_REF:0000052"} property_value: RO:0001025 GO:0016323 {evidence="IDA", xref="PMID:25986174"} property_value: RO:0001025 GO:0016323 {evidence="IDA", xref="PMID:31791063"} -property_value: RO:0001025 GO:0016324 {evidence="IDA", xref="PMID:11856762"} property_value: RO:0001025 GO:0016324 {evidence="IDA", xref="PMID:25986174"} +property_value: RO:0001025 GO:0016324 {evidence="IDA", xref="PMID:11856762"} property_value: RO:0001025 GO:0016324 {evidence="IDA", xref="PMID:31791063"} property_value: RO:0001025 GO:0031088 {evidence="IDA", xref="PMID:15297306"} property_value: RO:0002162 NCBITaxon:9606 @@ -74976,8 +74976,8 @@ id: https://identifiers.org/uniprot:O15446 name: DNA-directed RNA polymerase I subunit RPA34 is_a: PR:000000001 property_value: BFO:0000050 GO:0005736 {evidence="IDA", xref="PMID:16809778"} -property_value: BFO:0000050 GO:0005736 {evidence="IDA", xref="PMID:36271492"} property_value: BFO:0000050 GO:0005736 {evidence="IDA", xref="PMID:34671025"} +property_value: BFO:0000050 GO:0005736 {evidence="IDA", xref="PMID:36271492"} property_value: IAO:0000028 "POLR1G" xsd:string property_value: RO:0001025 GO:0001650 {evidence="IDA", xref="GO_REF:0000052"} property_value: RO:0001025 GO:0005654 {evidence="IDA", xref="GO_REF:0000052"} @@ -75713,8 +75713,8 @@ is_a: PR:000000001 property_value: IAO:0000028 "Dhx15" xsd:string property_value: RO:0002162 NCBITaxon:10090 property_value: RO:0002331 GO:0042742 {evidence="IMP", xref="PMID:33483420"} -property_value: RO:0002331 GO:0140374 {evidence="IMP", xref="PMID:26494172"} property_value: RO:0002331 GO:0140374 {evidence="IDA", xref="PMID:34678144"} +property_value: RO:0002331 GO:0140374 {evidence="IMP", xref="PMID:26494172"} [Term] id: https://identifiers.org/uniprot:O35295 @@ -77217,8 +77217,8 @@ property_value: RO:0002331 GO:0045585 {evidence="IDA", xref="PMID:10209962"} id: https://identifiers.org/uniprot:O43292 name: Glycosylphosphatidylinositol anchor attachment 1 protein is_a: PR:000000001 -property_value: BFO:0000050 GO:0042765 {evidence="IDA", xref="PMID:14660601"} property_value: BFO:0000050 GO:0042765 {evidence="IPI", xref="PMID:12802054"} +property_value: BFO:0000050 GO:0042765 {evidence="IDA", xref="PMID:14660601"} property_value: BFO:0000050 GO:0042765 {evidence="IDA", xref="PMID:11483512"} property_value: BFO:0000050 GO:0042765 {evidence="IDA", xref="PMID:12802054"} property_value: IAO:0000028 "GPAA1" xsd:string @@ -77280,8 +77280,8 @@ property_value: IAO:0000028 "CCP110" xsd:string property_value: RO:0002162 NCBITaxon:9606 property_value: RO:0002331 GO:0007099 {evidence="IMP", xref="PMID:17681131"} property_value: RO:0002331 GO:0007099 {evidence="IMP", xref="PMID:16244668"} -property_value: RO:0002331 GO:0051298 {evidence="IDA", xref="PMID:20596027"} property_value: RO:0002331 GO:0051298 {evidence="IMP", xref="PMID:12361598"} +property_value: RO:0002331 GO:0051298 {evidence="IDA", xref="PMID:20596027"} property_value: RO:0002331 GO:0051298 {evidence="IMP", xref="PMID:16760425"} property_value: RO:0002331 GO:0051298 {evidence="IMP", xref="PMID:23486064"} @@ -77631,8 +77631,8 @@ property_value: BFO:0000050 GO:0005634 {evidence="IDA", xref="PMID:18393360"} property_value: BFO:0000050 GO:0090571 {evidence="IPI", xref="PMID:18393360"} property_value: IAO:0000028 "FOXO3" xsd:string property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:15084260"} -property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:23640897"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:22761832"} +property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:23640897"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:23283301"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:16751106"} property_value: RO:0001025 GO:0005634 {evidence="IMP", xref="PMID:29445193"} @@ -77806,8 +77806,8 @@ id: https://identifiers.org/uniprot:O43623 name: Zinc finger protein SNAI2 is_a: PR:000000001 property_value: IAO:0000028 "SNAI2" xsd:string -property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:10866665"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:25893292"} +property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:10866665"} property_value: RO:0002162 NCBITaxon:9606 property_value: RO:0002331 GO:0001649 {evidence="IEP", xref="PMID:20128911"} property_value: RO:0002331 GO:0001837 {evidence="IMP", xref="PMID:17984306"} @@ -78534,8 +78534,8 @@ is_a: PR:000000001 property_value: IAO:0000028 "Naglu" xsd:string property_value: RO:0002162 NCBITaxon:10090 property_value: RO:0002264 GO:0001774 {evidence="IMP", xref="PMID:26607664"} -property_value: RO:0002264 GO:0006954 {evidence="IMP", xref="PMID:26147524"} property_value: RO:0002264 GO:0006954 {evidence="IMP", xref="PMID:25524704"} +property_value: RO:0002264 GO:0006954 {evidence="IMP", xref="PMID:26147524"} property_value: RO:0002264 GO:0006954 {evidence="IMP", xref="PMID:18509511"} property_value: RO:0002264 GO:0014004 {evidence="IMP", xref="PMID:18509511"} property_value: RO:0002264 GO:0022008 {evidence="IMP", xref="PMID:12111813"} @@ -78931,8 +78931,8 @@ is_a: PR:000000001 property_value: BFO:0000050 GO:1990512 {evidence="IPI", xref="PMID:20840750"} property_value: IAO:0000028 "Per2" xsd:string property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:23418588"} -property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:11889036"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:22767893"} +property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:11889036"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:22208286"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:15860628"} property_value: RO:0001025 GO:0005634 {evidence="IPI", xref="PMID:15689618"} @@ -79281,8 +79281,8 @@ id: https://identifiers.org/uniprot:O55124 name: M-protein is_a: PR:000000001 property_value: IAO:0000028 "Myom2" xsd:string -property_value: RO:0001025 GO:0031430 {evidence="IDA", xref="PMID:20215401"} property_value: RO:0001025 GO:0031430 {evidence="IDA", xref="PMID:20368620"} +property_value: RO:0001025 GO:0031430 {evidence="IDA", xref="PMID:20215401"} property_value: RO:0002162 NCBITaxon:10090 [Term] @@ -79423,8 +79423,8 @@ property_value: RO:0002162 NCBITaxon:10090 property_value: RO:0002264 GO:0036305 {evidence="IMP", xref="PMID:24603688"} property_value: RO:0002264 GO:0097186 {evidence="IMP", xref="PMID:15649948"} property_value: RO:0002264 GO:0097186 {evidence="IMP", xref="PMID:24603688"} -property_value: RO:0002264 GO:0097186 {evidence="IMP", xref="PMID:18252720"} property_value: RO:0002264 GO:0097186 {evidence="IMP", xref="PMID:22813216"} +property_value: RO:0002264 GO:0097186 {evidence="IMP", xref="PMID:18252720"} property_value: RO:0002327 GO:0030345 {evidence="IDA", xref="PMID:24603688"} [Term] @@ -82116,8 +82116,8 @@ id: https://identifiers.org/uniprot:O75351 name: Vacuolar protein sorting-associated protein 4B is_a: PR:000000001 property_value: IAO:0000028 "VPS4B" xsd:string -property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:20616062"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:16757520"} +property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:20616062"} property_value: RO:0001025 GO:0005768 {evidence="IDA", xref="PMID:11563910"} property_value: RO:0001025 GO:0010008 {evidence="IDA", xref="PMID:16757520"} property_value: RO:0001025 GO:0090543 {evidence="IDA", xref="PMID:20616062"} @@ -82241,8 +82241,8 @@ property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:20889716"} property_value: RO:0001025 GO:0005654 {evidence="IDA", xref="GO_REF:0000052"} property_value: RO:0001025 GO:0005730 {evidence="IDA", xref="GO_REF:0000052"} property_value: RO:0001025 GO:0005929 {evidence="IDA", xref="PMID:27932497"} -property_value: RO:0001025 GO:0005929 {evidence="IDA", xref="PMID:28154160"} property_value: RO:0001025 GO:0005929 {evidence="IDA", xref="PMID:20889716"} +property_value: RO:0001025 GO:0005929 {evidence="IDA", xref="PMID:28154160"} property_value: RO:0001025 GO:0097546 {evidence="IDA", xref="PMID:20889716"} property_value: RO:0001025 GO:0097731 {evidence="IDA", xref="PMID:20889716"} property_value: RO:0002162 NCBITaxon:9606 @@ -82484,8 +82484,8 @@ name: Transcription initiation protein SPT3 homolog is_a: PR:000000001 property_value: BFO:0000050 GO:0033276 {evidence="IDA", xref="PMID:10373431"} property_value: IAO:0000028 "SUPT3H" xsd:string -property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:11564863"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:9726987"} +property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:11564863"} property_value: RO:0001025 GO:0005654 {evidence="IDA", xref="GO_REF:0000052"} property_value: RO:0002162 NCBITaxon:9606 @@ -83235,8 +83235,8 @@ id: https://identifiers.org/uniprot:O75928 name: E3 SUMO-protein ligase PIAS2 is_a: PR:000000001 property_value: IAO:0000028 "PIAS2" xsd:string -property_value: RO:0001025 GO:0005634 {evidence="HDA", xref="PMID:21630459"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:11477070"} +property_value: RO:0001025 GO:0005634 {evidence="HDA", xref="PMID:21630459"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:14752048"} property_value: RO:0001025 GO:0005654 {evidence="IDA", xref="GO_REF:0000052"} property_value: RO:0002162 NCBITaxon:9606 @@ -83536,8 +83536,8 @@ is_a: PR:000000001 property_value: IAO:0000028 "BEST1" xsd:string property_value: RO:0001025 GO:0009925 {evidence="IDA", xref="PMID:31791063"} property_value: RO:0001025 GO:0016323 {evidence="IDA", xref="PMID:21330666"} -property_value: RO:0001025 GO:0016323 {evidence="IDA", xref="PMID:26200502"} property_value: RO:0001025 GO:0016323 {evidence="IDA", xref="PMID:19853238"} +property_value: RO:0001025 GO:0016323 {evidence="IDA", xref="PMID:26200502"} property_value: RO:0001025 GO:0016323 {evidence="IDA", xref="PMID:11050159"} property_value: RO:0002162 NCBITaxon:9606 property_value: RO:0002327 GO:0160133 {evidence="IDA", xref="PMID:18400985"} @@ -83780,8 +83780,8 @@ name: Unconventional myosin-Ia is_a: PR:000000001 property_value: IAO:0000028 "Myo1a" xsd:string property_value: RO:0001025 GO:0005902 {evidence="IDA", xref="PMID:9933937"} -property_value: RO:0001025 GO:0005903 {evidence="IDA", xref="PMID:15758024"} property_value: RO:0001025 GO:0005903 {evidence="IDA", xref="PMID:22114352"} +property_value: RO:0001025 GO:0005903 {evidence="IDA", xref="PMID:15758024"} property_value: RO:0001025 GO:0005903 {evidence="IDA", xref="PMID:20089841"} property_value: RO:0001025 GO:0009925 {evidence="IDA", xref="PMID:9933937"} property_value: RO:0001025 GO:0016324 {evidence="IDA", xref="PMID:9933937"} @@ -84173,16 +84173,16 @@ id: https://identifiers.org/uniprot:O88559 name: Menin is_a: PR:000000001 property_value: IAO:0000028 "Men1" xsd:string -property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:16195383"} -property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:15150273"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:12941803"} +property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:15150273"} +property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:16195383"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:17044021"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:9824159"} property_value: RO:0002162 NCBITaxon:10090 property_value: RO:0002263 GO:0008283 {evidence="IGI", xref="PMID:17409423"} -property_value: RO:0002263 GO:0008283 {evidence="IMP", xref="PMID:14633735"} property_value: RO:0002263 GO:0008283 {evidence="IMP", xref="PMID:12941803"} property_value: RO:0002263 GO:0008283 {evidence="IMP", xref="PMID:16195383"} +property_value: RO:0002263 GO:0008283 {evidence="IMP", xref="PMID:14633735"} property_value: RO:0002263 GO:0008283 {evidence="IMP", xref="PMID:17927973"} property_value: RO:0002263 GO:0008283 {evidence="IDA", xref="PMID:17975067"} property_value: RO:0002263 GO:0008283 {evidence="IMP", xref="PMID:15060136"} @@ -84962,20 +84962,20 @@ id: https://identifiers.org/uniprot:O88942 name: Nuclear factor of activated T-cells, cytoplasmic 1 is_a: PR:000000001 property_value: IAO:0000028 "Nfatc1" xsd:string -property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:32741026"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:21464233"} +property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:32741026"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:18978355"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:21514407"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:23990468"} -property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:21982707"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:11782539"} +property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:21982707"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:19463978"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:9515964"} -property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:9515963"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:10903175"} +property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:9515963"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:12970181"} -property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:19626032"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:24039232"} +property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:19626032"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:15304486"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:15850572"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:26644563"} @@ -85141,8 +85141,8 @@ id: https://identifiers.org/uniprot:O89019 name: Inversin is_a: PR:000000001 property_value: IAO:0000028 "Invs" xsd:string -property_value: RO:0001025 GO:0097543 {evidence="IDA", xref="PMID:29395339"} property_value: RO:0001025 GO:0097543 {evidence="IDA", xref="PMID:20169535"} +property_value: RO:0001025 GO:0097543 {evidence="IDA", xref="PMID:29395339"} property_value: RO:0001025 GO:0097546 {evidence="IDA", xref="PMID:20169535"} property_value: RO:0002162 NCBITaxon:10090 @@ -85216,8 +85216,8 @@ name: Transcription factor Sp1 is_a: PR:000000001 property_value: IAO:0000028 "Sp1" xsd:string property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:12119294"} -property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:27918959"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:15016652"} +property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:27918959"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:11004506"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:15817708"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:9705320"} @@ -85705,8 +85705,8 @@ property_value: BFO:0000050 GO:0071013 {evidence="IDA", xref="PMID:11991638"} property_value: IAO:0000028 "PRPF6" xsd:string property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:28781166"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:16414017"} -property_value: RO:0001025 GO:0016607 {evidence="IDA", xref="GO_REF:0000052"} property_value: RO:0001025 GO:0016607 {evidence="IDA", xref="PMID:21549338"} +property_value: RO:0001025 GO:0016607 {evidence="IDA", xref="GO_REF:0000052"} property_value: RO:0002162 NCBITaxon:9606 [Term] @@ -86115,8 +86115,8 @@ name: Starch-binding domain-containing protein 1 is_a: PR:000000001 property_value: IAO:0000028 "STBD1" xsd:string property_value: RO:0001025 GO:0005783 {evidence="IDA", xref="PMID:9794794"} -property_value: RO:0001025 GO:0005783 {evidence="IDA", xref="PMID:24837458"} property_value: RO:0001025 GO:0005783 {evidence="IDA", xref="GO_REF:0000052"} +property_value: RO:0001025 GO:0005783 {evidence="IDA", xref="PMID:24837458"} property_value: RO:0001025 GO:0030315 {evidence="IDA", xref="PMID:9794794"} property_value: RO:0002162 NCBITaxon:9606 property_value: RO:0002331 GO:0046907 {evidence="IGI", xref="PMID:27358407"} @@ -87478,8 +87478,8 @@ is_a: PR:000000001 property_value: IAO:0000028 "GAS8" xsd:string property_value: RO:0001025 GO:0005929 {evidence="IDA", xref="PMID:27120127"} property_value: RO:0001025 GO:0005929 {evidence="IDA", xref="PMID:16643277"} -property_value: RO:0001025 GO:0005930 {evidence="IDA", xref="PMID:26387594"} property_value: RO:0001025 GO:0005930 {evidence="IDA", xref="PMID:16643277"} +property_value: RO:0001025 GO:0005930 {evidence="IDA", xref="PMID:26387594"} property_value: RO:0001025 GO:0031514 {evidence="IDA", xref="PMID:26387594"} property_value: RO:0002162 NCBITaxon:9606 property_value: RO:0002331 GO:0060294 {evidence="IMP", xref="PMID:27472056"} @@ -87709,8 +87709,8 @@ property_value: RO:0001025 GO:0005654 {evidence="IDA", xref="GO_REF:0000052"} property_value: RO:0001025 GO:0032839 {evidence="IDA", xref="PMID:17324120"} property_value: RO:0001025 GO:0043025 {evidence="IDA", xref="PMID:17324120"} property_value: RO:0002162 NCBITaxon:9606 -property_value: RO:0002327 GO:0004784 {evidence="IDA", xref="PMID:15544046"} property_value: RO:0002327 GO:0004784 {evidence="IDA", xref="PMID:24140062"} +property_value: RO:0002327 GO:0004784 {evidence="IDA", xref="PMID:15544046"} property_value: RO:0002327 GO:0004784 {evidence="IDA", xref="PMID:17324120"} property_value: RO:0002327 GO:0004784 {evidence="IDA", xref="PMID:24567322"} property_value: RO:0002327 GO:0004784 {evidence="IDA", xref="PMID:12551919"} @@ -88259,8 +88259,8 @@ property_value: RO:0001025 GO:0009986 {evidence="IDA", xref="PMID:2836953"} property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:23979707"} property_value: RO:0002162 NCBITaxon:9606 property_value: RO:0002331 GO:0002548 {evidence="IDA", xref="PMID:17991872"} -property_value: RO:0002331 GO:0060326 {evidence="IDA", xref="PMID:21245381"} property_value: RO:0002331 GO:0060326 {evidence="IDA", xref="PMID:17991872"} +property_value: RO:0002331 GO:0060326 {evidence="IDA", xref="PMID:21245381"} property_value: RO:0002331 GO:0060326 {evidence="IDA", xref="PMID:16014047"} [Term] @@ -88272,8 +88272,8 @@ property_value: RO:0001025 GO:0005769 {evidence="IDA", xref="PMID:17461796"} property_value: RO:0001025 GO:0005769 {evidence="IDA", xref="PMID:15166224"} property_value: RO:0001025 GO:0005770 {evidence="IDA", xref="PMID:17461796"} property_value: RO:0001025 GO:0005794 {evidence="IDA", xref="PMID:17461796"} -property_value: RO:0001025 GO:0005905 {evidence="IDA", xref="PMID:15166224"} property_value: RO:0001025 GO:0005905 {evidence="IDA", xref="PMID:6091915"} +property_value: RO:0001025 GO:0005905 {evidence="IDA", xref="PMID:15166224"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:15166224"} property_value: RO:0001025 GO:0009986 {evidence="IDA", xref="PMID:17461796"} property_value: RO:0002162 NCBITaxon:9606 @@ -88646,8 +88646,8 @@ is_a: PR:000000001 property_value: IAO:0000028 "Il2ra" xsd:string property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:14990792"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:16973387"} -property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:18958875"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:15843532"} +property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:18958875"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:8769481"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:18792410"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:16301745"} @@ -88660,9 +88660,9 @@ property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:17082577"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:7584142"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:8262055"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:15368291"} -property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:15728238"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:15909309"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:18628982"} +property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:15728238"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:12867038"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:10760791"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:19723499"} @@ -88742,12 +88742,12 @@ id: https://identifiers.org/uniprot:P01731 name: T-cell surface glycoprotein CD8 alpha chain is_a: PR:000000001 property_value: IAO:0000028 "Cd8a" xsd:string -property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:19349303"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:16455951"} +property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:19349303"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:18836449"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:15322158"} -property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:17357106"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:8688082"} +property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:17357106"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:15728238"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:10704459"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:10943842"} @@ -88760,8 +88760,8 @@ property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:16287714"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:15294943"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:8788039"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:22072979"} -property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:10072077"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:19723499"} +property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:10072077"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:18984740"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:8755570"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:15795238"} @@ -88823,8 +88823,8 @@ property_value: RO:0002162 NCBITaxon:9606 property_value: RO:0002327 GO:0001792 {evidence="IDA", xref="PMID:22022593"} property_value: RO:0002331 GO:0001580 {evidence="IDA", xref="PMID:24248522"} property_value: RO:0002331 GO:0002415 {evidence="IDA", xref="PMID:9379029"} -property_value: RO:0002331 GO:0002415 {evidence="IDA", xref="PMID:22022593"} property_value: RO:0002331 GO:0002415 {evidence="IDA", xref="PMID:10229845"} +property_value: RO:0002331 GO:0002415 {evidence="IDA", xref="PMID:22022593"} property_value: RO:0002331 GO:0038093 {evidence="IDA", xref="PMID:22022593"} [Term] @@ -88925,11 +88925,11 @@ property_value: RO:0002264 GO:0050778 {evidence="IDA", xref="PMID:10395649"} id: https://identifiers.org/uniprot:P01867 name: Immunoglobulin heavy constant gamma 2B is_a: PR:000000001 -property_value: BFO:0000050 GO:0042571 {evidence="IDA", xref="PMID:16492738"} property_value: BFO:0000050 GO:0042571 {evidence="IDA", xref="PMID:7688139"} +property_value: BFO:0000050 GO:0042571 {evidence="IDA", xref="PMID:16492738"} property_value: BFO:0000050 GO:0042571 {evidence="IDA", xref="PMID:8041705"} -property_value: BFO:0000050 GO:0042571 {evidence="IDA", xref="PMID:12867038"} property_value: BFO:0000050 GO:0042571 {evidence="IDA", xref="PMID:14988498"} +property_value: BFO:0000050 GO:0042571 {evidence="IDA", xref="PMID:12867038"} property_value: BFO:0000050 GO:0042571 {evidence="IDA", xref="PMID:11057672"} property_value: BFO:0000050 GO:0042571 {evidence="IDA", xref="PMID:8418208"} property_value: BFO:0000050 GO:0042571 {evidence="IDA", xref="PMID:10704460"} @@ -89045,8 +89045,8 @@ property_value: BFO:0000050 GO:0042571 {evidence="IDA", xref="PMID:8552190"} property_value: BFO:0000050 GO:0042571 {evidence="IDA", xref="PMID:10704460"} property_value: BFO:0000050 GO:0042571 {evidence="IDA", xref="PMID:12882831"} property_value: BFO:0000050 GO:0042571 {evidence="IDA", xref="PMID:9834074"} -property_value: BFO:0000050 GO:0042571 {evidence="IDA", xref="PMID:16492738"} property_value: BFO:0000050 GO:0042571 {evidence="IDA", xref="PMID:7688139"} +property_value: BFO:0000050 GO:0042571 {evidence="IDA", xref="PMID:16492738"} property_value: BFO:0000050 GO:0042571 {evidence="IDA", xref="PMID:11911823"} property_value: BFO:0000050 GO:0042571 {evidence="IDA", xref="PMID:11714799"} property_value: BFO:0000050 GO:0042571 {evidence="IDA", xref="PMID:12867038"} @@ -89150,8 +89150,8 @@ property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:10979977"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:10704460"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:14662849"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:7477352"} -property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:7477353"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:8566034"} +property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:7477353"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:10072077"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:12882831"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:17941951"} @@ -89297,8 +89297,8 @@ id: https://identifiers.org/uniprot:P01901 name: H-2 class I histocompatibility antigen, K-B alpha chain is_a: PR:000000001 property_value: IAO:0000028 "H2-K1" xsd:string -property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:14990792"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:11754812"} +property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:14990792"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:9133426"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:1538753"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:12902470"} @@ -89316,8 +89316,8 @@ id: https://identifiers.org/uniprot:P01902 name: H-2 class I histocompatibility antigen, K-D alpha chain is_a: PR:000000001 property_value: IAO:0000028 "H2-K1" xsd:string -property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:11754812"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:14990792"} +property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:11754812"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:9133426"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:1538753"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:12902470"} @@ -89380,8 +89380,8 @@ property_value: BFO:0000050 GO:0042613 {evidence="IDA", xref="PMID:11148202"} property_value: BFO:0000050 GO:0042613 {evidence="IDA", xref="PMID:8598040"} property_value: BFO:0000050 GO:0042613 {evidence="IDA", xref="PMID:8598041"} property_value: BFO:0000050 GO:0042613 {evidence="IDA", xref="PMID:7679955"} -property_value: BFO:0000050 GO:0042613 {evidence="IDA", xref="PMID:7985028"} property_value: BFO:0000050 GO:0042613 {evidence="IDA", xref="PMID:8638109"} +property_value: BFO:0000050 GO:0042613 {evidence="IDA", xref="PMID:7985028"} property_value: BFO:0000050 GO:0042613 {evidence="IDA", xref="PMID:9492004"} property_value: IAO:0000028 "H2-Aa" xsd:string property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:9432982"} @@ -89639,8 +89639,8 @@ name: Collagen alpha-1(II) chain is_a: PR:000000001 property_value: BFO:0000050 GO:0005585 {evidence="IDA", xref="PMID:8660302"} property_value: IAO:0000028 "COL2A1" xsd:string -property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:28344315"} property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:27559042"} +property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:28344315"} property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:23658023"} property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:28675934"} property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:28327460"} @@ -89696,8 +89696,8 @@ name: Collagen alpha-1(IV) chain is_a: PR:000000001 property_value: BFO:0000050 GO:0005587 {evidence="IDA", xref="PMID:12101409"} property_value: IAO:0000028 "Col4a1" xsd:string -property_value: RO:0001025 GO:0005604 {evidence="IDA", xref="PMID:18757743"} property_value: RO:0001025 GO:0005604 {evidence="IDA", xref="PMID:15895400"} +property_value: RO:0001025 GO:0005604 {evidence="IDA", xref="PMID:18757743"} property_value: RO:0001025 GO:0005604 {evidence="IDA", xref="PMID:11511678"} property_value: RO:0001025 GO:0005604 {evidence="IDA", xref="PMID:11732842"} property_value: RO:0001025 GO:0005604 {evidence="IDA", xref="PMID:16041630"} @@ -89712,8 +89712,8 @@ name: Laminin subunit gamma-1 is_a: PR:000000001 property_value: BFO:0000050 GO:0043259 {evidence="IPI", xref="PMID:9299121"} property_value: IAO:0000028 "Lamc1" xsd:string -property_value: RO:0001025 GO:0005604 {evidence="IDA", xref="PMID:18757743"} property_value: RO:0001025 GO:0005604 {evidence="IDA", xref="PMID:15895400"} +property_value: RO:0001025 GO:0005604 {evidence="IDA", xref="PMID:18757743"} property_value: RO:0001025 GO:0005604 {evidence="IDA", xref="PMID:12051813"} property_value: RO:0001025 GO:0005604 {evidence="IDA", xref="PMID:9264260"} property_value: RO:0001025 GO:0005604 {evidence="IDA", xref="PMID:1292752"} @@ -89737,8 +89737,8 @@ property_value: BFO:0000050 GO:0005606 {evidence="IDA", xref="PMID:9264260"} property_value: BFO:0000050 GO:0043256 {evidence="IDA", xref="PMID:8034675"} property_value: BFO:0000050 GO:0043259 {evidence="IPI", xref="PMID:9299121"} property_value: IAO:0000028 "Lamb1" xsd:string -property_value: RO:0001025 GO:0005604 {evidence="IDA", xref="PMID:18757743"} property_value: RO:0001025 GO:0005604 {evidence="IDA", xref="PMID:15895400"} +property_value: RO:0001025 GO:0005604 {evidence="IDA", xref="PMID:18757743"} property_value: RO:0001025 GO:0005604 {evidence="IDA", xref="PMID:16631359"} property_value: RO:0001025 GO:0005604 {evidence="IDA", xref="PMID:16041630"} property_value: RO:0001025 GO:0005604 {evidence="IDA", xref="PMID:15102706"} @@ -89782,8 +89782,8 @@ id: https://identifiers.org/uniprot:P02533 name: Keratin, type I cytoskeletal 14 is_a: PR:000000001 property_value: IAO:0000028 "KRT14" xsd:string -property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:11724817"} property_value: RO:0001025 GO:0005634 {evidence="HDA", xref="PMID:21630459"} +property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:11724817"} property_value: RO:0002162 NCBITaxon:9606 [Term] @@ -90317,8 +90317,8 @@ property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:17505058"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:20074560"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:20080953"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:15569929"} -property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:9841876"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:22693546"} +property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:9841876"} property_value: RO:0002162 NCBITaxon:9606 [Term] @@ -90448,8 +90448,8 @@ id: https://identifiers.org/uniprot:P03991 name: H-2 class I histocompatibility antigen, K-W28 alpha chain is_a: PR:000000001 property_value: IAO:0000028 "H2-K1" xsd:string -property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:11754812"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:14990792"} +property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:11754812"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:1538753"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:12902470"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:15314074"} @@ -90512,8 +90512,8 @@ is_a: PR:000000001 property_value: IAO:0000028 "VTN" xsd:string property_value: RO:0001025 GO:0005783 {evidence="IDA", xref="GO_REF:0000052"} property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:25037231"} -property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:28675934"} property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:28327460"} +property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:28675934"} property_value: RO:0001025 GO:0062023 {evidence="IDA", xref="PMID:1632457"} property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:27559042"} property_value: RO:0002162 NCBITaxon:9606 @@ -90535,8 +90535,8 @@ name: Catalase is_a: PR:000000001 property_value: IAO:0000028 "CAT" xsd:string property_value: RO:0002162 NCBITaxon:9606 -property_value: RO:0002327 GO:0004096 {evidence="IDA", xref="PMID:18379038"} property_value: RO:0002327 GO:0004096 {evidence="IDA", xref="PMID:7882369"} +property_value: RO:0002327 GO:0004096 {evidence="IDA", xref="PMID:18379038"} property_value: RO:0002327 GO:0004096 {evidence="IDA", xref="PMID:18312938"} property_value: RO:0002327 GO:0004096 {evidence="IDA", xref="PMID:16644728"} property_value: RO:0002327 GO:0016209 {evidence="IDA", xref="PMID:10514471"} @@ -90864,8 +90864,8 @@ name: H-2 class I histocompatibility antigen, K-K alpha chain is_a: PR:000000001 property_value: IAO:0000028 "H2-K1" xsd:string property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:1538753"} -property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:11754812"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:14990792"} +property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:11754812"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:9133426"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:15314074"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:12902470"} @@ -90929,8 +90929,8 @@ name: H-2 class II histocompatibility antigen, A-D alpha chain is_a: PR:000000001 property_value: BFO:0000050 GO:0042613 {evidence="IDA", xref="PMID:8598040"} property_value: BFO:0000050 GO:0042613 {evidence="IDA", xref="PMID:8598041"} -property_value: BFO:0000050 GO:0042613 {evidence="IDA", xref="PMID:8638109"} property_value: BFO:0000050 GO:0042613 {evidence="IDA", xref="PMID:7985028"} +property_value: BFO:0000050 GO:0042613 {evidence="IDA", xref="PMID:8638109"} property_value: BFO:0000050 GO:0042613 {evidence="IDA", xref="PMID:7679955"} property_value: BFO:0000050 GO:0042613 {evidence="IDA", xref="PMID:9492004"} property_value: BFO:0000050 GO:0042613 {evidence="IDA", xref="PMID:11148202"} @@ -91177,8 +91177,8 @@ name: HLA class I histocompatibility antigen, A alpha chain is_a: PR:000000001 property_value: BFO:0000050 GO:0042612 {evidence="IDA", xref="PMID:22031944"} property_value: BFO:0000050 GO:0042612 {evidence="IDA", xref="PMID:7694806"} -property_value: BFO:0000050 GO:0042612 {evidence="IDA", xref="PMID:8906788"} property_value: BFO:0000050 GO:0042612 {evidence="IDA", xref="PMID:25631937"} +property_value: BFO:0000050 GO:0042612 {evidence="IDA", xref="PMID:8906788"} property_value: BFO:0000050 GO:0042612 {evidence="IDA", xref="PMID:8805302"} property_value: BFO:0000050 GO:0042824 {evidence="IDA", xref="PMID:21263072"} property_value: IAO:0000028 "HLA-A" xsd:string @@ -91248,8 +91248,8 @@ property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:7679955"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:15322158"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:19723499"} property_value: RO:0002162 NCBITaxon:10090 -property_value: RO:0002264 GO:0006886 {evidence="IMP", xref="PMID:7679955"} property_value: RO:0002264 GO:0006886 {evidence="IDA", xref="PMID:15294975"} +property_value: RO:0002264 GO:0006886 {evidence="IMP", xref="PMID:7679955"} property_value: RO:0002264 GO:0006886 {evidence="IDA", xref="PMID:11754812"} property_value: RO:0002264 GO:0016064 {evidence="IMP", xref="PMID:7679955"} property_value: RO:0002264 GO:0019882 {evidence="IMP", xref="PMID:9432982"} @@ -91382,8 +91382,8 @@ is_a: PR:000000001 property_value: IAO:0000028 "Chrng" xsd:string property_value: RO:0001025 GO:0045211 {evidence="IDA", xref="PMID:15883046"} property_value: RO:0002162 NCBITaxon:10090 -property_value: RO:0002327 GO:0022848 {evidence="IGI", xref="PMID:8798466"} property_value: RO:0002327 GO:0022848 {evidence="IGI", xref="PMID:2383398"} +property_value: RO:0002327 GO:0022848 {evidence="IGI", xref="PMID:8798466"} [Term] id: https://identifiers.org/uniprot:P04768 @@ -92016,8 +92016,8 @@ is_a: PR:000000001 property_value: BFO:0000050 GO:0005634 {evidence="IDA", xref="PMID:12370307"} property_value: BFO:0000050 GO:0005634 {evidence="IDA", xref="PMID:9443941"} property_value: BFO:0000050 GO:0005634 {evidence="IDA", xref="PMID:21113145"} -property_value: BFO:0000050 GO:0035976 {evidence="IPI", xref="PMID:8662824"} property_value: BFO:0000050 GO:0035976 {evidence="IMP", xref="PMID:26514923"} +property_value: BFO:0000050 GO:0035976 {evidence="IPI", xref="PMID:8662824"} property_value: BFO:0000050 GO:0035976 {evidence="IPI", xref="PMID:9510247"} property_value: BFO:0000050 GO:0035976 {evidence="IDA", xref="PMID:10508860"} property_value: BFO:0000050 GO:0035976 {evidence="IPI", xref="PMID:7816143"} @@ -92035,8 +92035,8 @@ id: https://identifiers.org/uniprot:P05423 name: DNA-directed RNA polymerase III subunit RPC4 is_a: PR:000000001 property_value: BFO:0000050 GO:0005666 {evidence="IDA", xref="PMID:33335104"} -property_value: BFO:0000050 GO:0005666 {evidence="IDA", xref="PMID:34675218"} property_value: BFO:0000050 GO:0005666 {evidence="IDA", xref="PMID:24107381"} +property_value: BFO:0000050 GO:0005666 {evidence="IDA", xref="PMID:34675218"} property_value: IAO:0000028 "POLR3D" xsd:string property_value: RO:0001025 GO:0005654 {evidence="IDA", xref="GO_REF:0000052"} property_value: RO:0002162 NCBITaxon:9606 @@ -92095,8 +92095,8 @@ property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:15947484"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:18971422"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:16455951"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:12714519"} -property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:14990792"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:12714518"} +property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:14990792"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:18958875"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:15909309"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:10943842"} @@ -92139,8 +92139,8 @@ is_a: PR:000000001 property_value: IAO:0000028 "Ly6a" xsd:string property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:18971422"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:21708977"} -property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:20660734"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:16455951"} +property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:20660734"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:21508411"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:12714519"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:12935903"} @@ -92210,8 +92210,8 @@ property_value: RO:0001025 GO:0009986 {evidence="IDA", xref="PMID:17158881"} property_value: RO:0001025 GO:0009986 {evidence="HDA", xref="PMID:23658023"} property_value: RO:0001025 GO:0009986 {evidence="IDA", xref="PMID:23620790"} property_value: RO:0001025 GO:0009986 {evidence="IDA", xref="PMID:24036928"} -property_value: RO:0001025 GO:0009986 {evidence="IDA", xref="PMID:25063885"} property_value: RO:0001025 GO:0009986 {evidence="IDA", xref="PMID:1715889"} +property_value: RO:0001025 GO:0009986 {evidence="IDA", xref="PMID:25063885"} property_value: RO:0001025 GO:0009986 {evidence="IDA", xref="PMID:21310825"} property_value: RO:0001025 GO:0009986 {evidence="IDA", xref="PMID:19234460"} property_value: RO:0001025 GO:0009986 {evidence="IDA", xref="PMID:23023225"} @@ -92323,8 +92323,8 @@ property_value: BFO:0000050 GO:0005588 {evidence="IMP", xref="PMID:9425231"} property_value: IAO:0000028 "COL5A2" xsd:string property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:25037231"} property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:27068509"} -property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:27559042"} property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:28344315"} +property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:27559042"} property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:28327460"} property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:28675934"} property_value: RO:0002162 NCBITaxon:9606 @@ -92431,31 +92431,31 @@ property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:10704459"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:10072077"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:8755570"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:21460847"} -property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:7630421"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:8788039"} +property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:7630421"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:7477353"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:20399120"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:19934022"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:19838199"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:9133426"} -property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:19349303"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:16455951"} +property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:19349303"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:12421911"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:15322158"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:18836449"} -property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:16287714"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:8524870"} +property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:16287714"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:7589135"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:17082577"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:14609575"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:20706986"} -property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:15368291"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:9208839"} +property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:15368291"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:10943842"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:19723499"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:15795238"} -property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:18641307"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:18776904"} +property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:18641307"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:22072979"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:21508411"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:19008373"} @@ -92500,8 +92500,8 @@ property_value: BFO:0000050 GO:0042613 {evidence="IDA", xref="PMID:11148202"} property_value: BFO:0000050 GO:0042613 {evidence="IDA", xref="PMID:9492004"} property_value: BFO:0000050 GO:0042613 {evidence="IDA", xref="PMID:9432982"} property_value: BFO:0000050 GO:0042613 {evidence="IDA", xref="PMID:7679955"} -property_value: BFO:0000050 GO:0042613 {evidence="IDA", xref="PMID:7985028"} property_value: BFO:0000050 GO:0042613 {evidence="IDA", xref="PMID:8638109"} +property_value: BFO:0000050 GO:0042613 {evidence="IDA", xref="PMID:7985028"} property_value: BFO:0000050 GO:0042613 {evidence="IDA", xref="PMID:8598041"} property_value: BFO:0000050 GO:0042613 {evidence="IDA", xref="PMID:8598040"} property_value: IAO:0000028 "H2-Ab1" xsd:string @@ -92574,8 +92574,8 @@ name: H-2 class II histocompatibility antigen, A-S beta chain is_a: PR:000000001 property_value: BFO:0000050 GO:0042613 {evidence="IDA", xref="PMID:11148202"} property_value: BFO:0000050 GO:0042613 {evidence="IDA", xref="PMID:9492004"} -property_value: BFO:0000050 GO:0042613 {evidence="IDA", xref="PMID:8638109"} property_value: BFO:0000050 GO:0042613 {evidence="IDA", xref="PMID:7985028"} +property_value: BFO:0000050 GO:0042613 {evidence="IDA", xref="PMID:8638109"} property_value: BFO:0000050 GO:0042613 {evidence="IDA", xref="PMID:7679955"} property_value: BFO:0000050 GO:0042613 {evidence="IDA", xref="PMID:9432982"} property_value: BFO:0000050 GO:0042613 {evidence="IDA", xref="PMID:8598040"} @@ -92612,8 +92612,8 @@ name: H-2 class II histocompatibility antigen, A-F beta chain is_a: PR:000000001 property_value: BFO:0000050 GO:0042613 {evidence="IDA", xref="PMID:9492004"} property_value: BFO:0000050 GO:0042613 {evidence="IDA", xref="PMID:11148202"} -property_value: BFO:0000050 GO:0042613 {evidence="IDA", xref="PMID:7985028"} property_value: BFO:0000050 GO:0042613 {evidence="IDA", xref="PMID:8638109"} +property_value: BFO:0000050 GO:0042613 {evidence="IDA", xref="PMID:7985028"} property_value: BFO:0000050 GO:0042613 {evidence="IDA", xref="PMID:9432982"} property_value: BFO:0000050 GO:0042613 {evidence="IDA", xref="PMID:7679955"} property_value: BFO:0000050 GO:0042613 {evidence="IDA", xref="PMID:8598041"} @@ -92965,8 +92965,8 @@ id: https://identifiers.org/uniprot:P06800 name: Receptor-type tyrosine-protein phosphatase C is_a: PR:000000001 property_value: IAO:0000028 "Ptprc" xsd:string -property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:18628982"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:15909309"} +property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:18628982"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:15843532"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:21606356"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:20709950"} @@ -92983,16 +92983,16 @@ property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:6610701"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:19015308"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:15795238"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:17277142"} -property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:12900455"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:15845452"} +property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:12900455"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:10943842"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:14609575"} -property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:9208839"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:8043862"} +property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:9208839"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:16287714"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:15240667"} -property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:16455951"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:20660734"} +property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:16455951"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:12714519"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:19934022"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:24029230"} @@ -93000,8 +93000,8 @@ property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:61878"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:19838199"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:10848813"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:7751624"} -property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:7630421"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:8788039"} +property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:7630421"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:16493007"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:7589135"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:18762567"} @@ -93733,8 +93733,8 @@ property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:20399120"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:20956546"} property_value: RO:0002162 NCBITaxon:10090 property_value: RO:0002263 GO:0042098 {evidence="IDA", xref="PMID:1588041"} -property_value: RO:0002263 GO:0042100 {evidence="IDA", xref="PMID:14607964"} property_value: RO:0002263 GO:0042100 {evidence="IDA", xref="PMID:10979977"} +property_value: RO:0002263 GO:0042100 {evidence="IDA", xref="PMID:14607964"} property_value: RO:0002263 GO:0042113 {evidence="IDA", xref="PMID:8566034"} property_value: RO:0002263 GO:0048289 {evidence="IDA", xref="PMID:14988498"} property_value: RO:0002263 GO:0048291 {evidence="IDA", xref="PMID:14988498"} @@ -93953,8 +93953,8 @@ is_a: PR:000000001 property_value: IAO:0000028 "Prm2" xsd:string property_value: RO:0001025 GO:0001673 {evidence="IDA", xref="PMID:14680821"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:17261847"} -property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:11326282"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:10369260"} +property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:11326282"} property_value: RO:0002162 NCBITaxon:10090 property_value: RO:0002264 GO:0007286 {evidence="IMP", xref="PMID:11326282"} property_value: RO:0002331 GO:0007283 {evidence="IMP", xref="PMID:12620939"} @@ -95069,8 +95069,8 @@ property_value: RO:0001025 GO:0031902 {evidence="IDA", xref="PMID:23632027"} property_value: RO:0001025 GO:0031904 {evidence="IDA", xref="PMID:22660413"} property_value: RO:0001025 GO:0032585 {evidence="HDA", xref="PMID:12519789"} property_value: RO:0001025 GO:0032585 {evidence="IDA", xref="PMID:26280656"} -property_value: RO:0001025 GO:0097487 {evidence="IDA", xref="PMID:21962903"} property_value: RO:0001025 GO:0097487 {evidence="IDA", xref="PMID:26387950"} +property_value: RO:0001025 GO:0097487 {evidence="IDA", xref="PMID:21962903"} property_value: RO:0001025 GO:0097487 {evidence="IDA", xref="PMID:26280656"} property_value: RO:0002162 NCBITaxon:9606 property_value: RO:0002331 GO:0016477 {evidence="IMP", xref="PMID:23632027"} @@ -95087,8 +95087,8 @@ property_value: RO:0001025 GO:0005929 {evidence="IDA", xref="PMID:17470460"} property_value: RO:0001025 GO:0005929 {evidence="IDA", xref="PMID:15458427"} property_value: RO:0001025 GO:0005929 {evidence="IMP", xref="PMID:20048263"} property_value: RO:0001025 GO:0016324 {evidence="IDA", xref="PMID:16243292"} -property_value: RO:0001025 GO:0036064 {evidence="IDA", xref="PMID:14983006"} property_value: RO:0001025 GO:0036064 {evidence="IDA", xref="PMID:14978161"} +property_value: RO:0001025 GO:0036064 {evidence="IDA", xref="PMID:14983006"} property_value: RO:0002162 NCBITaxon:9606 property_value: RO:0002331 GO:0006874 {evidence="IMP", xref="PMID:17669261"} @@ -95211,8 +95211,8 @@ property_value: RO:0002331 GO:0002042 {evidence="IDA", xref="PMID:18059339"} property_value: RO:0002331 GO:0002042 {evidence="IGI", xref="PMID:19351956"} property_value: RO:0002331 GO:0045766 {evidence="IDA", xref="PMID:16774925"} property_value: RO:0002331 GO:0045766 {evidence="IDA", xref="PMID:28302677"} -property_value: RO:0002331 GO:0045766 {evidence="IGI", xref="PMID:16774925"} property_value: RO:0002331 GO:0045766 {evidence="IDA", xref="PMID:20011604"} +property_value: RO:0002331 GO:0045766 {evidence="IGI", xref="PMID:16774925"} property_value: RO:0002331 GO:0060591 {evidence="IDA", xref="PMID:17167778"} property_value: RO:0002331 GO:1903672 {evidence="IMP", xref="PMID:23469107"} property_value: RO:0002331 GO:1903672 {evidence="IDA", xref="PMID:16756958"} @@ -95357,8 +95357,8 @@ is_a: PR:000000001 property_value: BFO:0000050 GO:0034663 {evidence="IDA", xref="PMID:12475965"} property_value: IAO:0000028 "P4hb" xsd:string property_value: RO:0001025 GO:0005783 {evidence="IDA", xref="PMID:14622145"} -property_value: RO:0001025 GO:0005783 {evidence="IDA", xref="PMID:28053051"} property_value: RO:0001025 GO:0005783 {evidence="IDA", xref="PMID:15767459"} +property_value: RO:0001025 GO:0005783 {evidence="IDA", xref="PMID:28053051"} property_value: RO:0001025 GO:0005783 {evidence="IDA", xref="PMID:15767678"} property_value: RO:0001025 GO:0005783 {evidence="IDA", xref="PMID:9493907"} property_value: RO:0001025 GO:0005783 {evidence="IDA", xref="PMID:9806833"} @@ -95846,8 +95846,8 @@ property_value: RO:0002264 GO:0048666 {evidence="IMP", xref="PMID:8790408"} property_value: RO:0002264 GO:0048773 {evidence="IMP", xref="PMID:15205258"} property_value: RO:0002327 GO:0004784 {evidence="IMP", xref="PMID:15182862"} property_value: RO:0002327 GO:0004784 {evidence="IDA", xref="PMID:18218638"} -property_value: RO:0002327 GO:0004784 {evidence="IMP", xref="PMID:23195678"} property_value: RO:0002327 GO:0004784 {evidence="IDA", xref="PMID:12646716"} +property_value: RO:0002327 GO:0004784 {evidence="IMP", xref="PMID:23195678"} property_value: RO:0002327 GO:0004784 {evidence="IMP", xref="PMID:12176043"} property_value: RO:0002327 GO:0004784 {evidence="IDA", xref="PMID:9651187"} property_value: RO:0002327 GO:0004784 {evidence="IDA", xref="PMID:7333654"} @@ -95889,8 +95889,8 @@ property_value: RO:0001025 GO:0005902 {evidence="IDA", xref="PMID:33129760"} property_value: RO:0001025 GO:0009986 {evidence="IDA", xref="PMID:11511678"} property_value: RO:0001025 GO:0016323 {evidence="IDA", xref="PMID:20089884"} property_value: RO:0001025 GO:0016323 {evidence="IDA", xref="PMID:15788452"} -property_value: RO:0001025 GO:0016323 {evidence="IDA", xref="PMID:20551175"} property_value: RO:0001025 GO:0016323 {evidence="IDA", xref="PMID:20016102"} +property_value: RO:0001025 GO:0016323 {evidence="IDA", xref="PMID:20551175"} property_value: RO:0001025 GO:0016323 {evidence="IDA", xref="PMID:24191021"} property_value: RO:0001025 GO:0016323 {evidence="IDA", xref="PMID:23266329"} property_value: RO:0001025 GO:0016323 {evidence="IDA", xref="PMID:20637190"} @@ -95937,8 +95937,8 @@ property_value: RO:0002331 GO:0160049 {evidence="IDA", xref="PMID:35460603"} property_value: RO:0002432 GO:0005634 {evidence="IDA", xref="PMID:35393539"} property_value: RO:0002432 GO:0005634 {evidence="IDA", xref="PMID:35460603"} property_value: RO:0002432 GO:0005634 {evidence="IDA", xref="PMID:27256882"} -property_value: RO:0002432 GO:0005634 {evidence="IDA", xref="PMID:22464733"} property_value: RO:0002432 GO:0005634 {evidence="IDA", xref="PMID:34102106"} +property_value: RO:0002432 GO:0005634 {evidence="IDA", xref="PMID:22464733"} property_value: RO:0002432 GO:0043596 {evidence="IDA", xref="PMID:33412112"} [Term] @@ -96110,8 +96110,8 @@ property_value: RO:0001025 GO:0000792 {evidence="IDA", xref="PMID:19834540"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:16319397"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:22720776"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:11331621"} -property_value: RO:0001025 GO:0005634 {evidence="HDA", xref="PMID:21630459"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:16457589"} +property_value: RO:0001025 GO:0005634 {evidence="HDA", xref="PMID:21630459"} property_value: RO:0002162 NCBITaxon:9606 [Term] @@ -96127,8 +96127,8 @@ id: https://identifiers.org/uniprot:P0C0S8 name: Histone H2A type 1 is_a: PR:000000001 property_value: IAO:0000028 "H2AC11" xsd:string -property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:16457589"} property_value: RO:0001025 GO:0005634 {evidence="HDA", xref="PMID:21630459"} +property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:16457589"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:16319397"} property_value: RO:0002162 NCBITaxon:9606 @@ -96182,8 +96182,8 @@ is_a: PR:000000001 property_value: IAO:0000028 "Ptprq" xsd:string property_value: RO:0001025 GO:0016324 {evidence="IDA", xref="PMID:24285636"} property_value: RO:0001025 GO:0032421 {evidence="IDA", xref="PMID:22357859"} -property_value: RO:0001025 GO:0120044 {evidence="IDA", xref="PMID:24285636"} property_value: RO:0001025 GO:0120044 {evidence="IDA", xref="PMID:37952086"} +property_value: RO:0001025 GO:0120044 {evidence="IDA", xref="PMID:24285636"} property_value: RO:0002162 NCBITaxon:10090 property_value: RO:0002264 GO:0002244 {evidence="IMP", xref="PMID:24029230"} property_value: RO:0002264 GO:0050910 {evidence="IMP", xref="PMID:22357859"} @@ -96853,16 +96853,16 @@ property_value: RO:0002331 GO:0002286 {evidence="IDA", xref="PMID:27036003"} id: https://identifiers.org/uniprot:P0DSE2 name: M1-specific T cell receptor beta chain is_a: PR:000000001 -property_value: BFO:0000050 GO:0042101 {evidence="IDA", xref="PMID:29997621"} property_value: BFO:0000050 GO:0042101 {evidence="IDA", xref="PMID:27036003"} +property_value: BFO:0000050 GO:0042101 {evidence="IDA", xref="PMID:29997621"} property_value: BFO:0000050 GO:0042101 {evidence="IDA", xref="PMID:12796775"} property_value: BFO:0000050 GO:0042101 {evidence="IDA", xref="PMID:18275829"} property_value: IAO:0000028 "TRB" xsd:string property_value: RO:0001025 GO:0009986 {evidence="IDA", xref="PMID:29997621"} property_value: RO:0002162 NCBITaxon:9606 property_value: RO:0002331 GO:0002250 {evidence="IDA", xref="PMID:18275829"} -property_value: RO:0002331 GO:0002250 {evidence="IDA", xref="PMID:29997621"} property_value: RO:0002331 GO:0002250 {evidence="IDA", xref="PMID:27036003"} +property_value: RO:0002331 GO:0002250 {evidence="IDA", xref="PMID:29997621"} property_value: RO:0002331 GO:0002286 {evidence="IDA", xref="PMID:27036003"} [Term] @@ -97353,8 +97353,8 @@ name: Nidogen-1 is_a: PR:000000001 property_value: IAO:0000028 "Nid1" xsd:string property_value: RO:0001025 GO:0005604 {evidence="IDA", xref="PMID:16330543"} -property_value: RO:0001025 GO:0005604 {evidence="IDA", xref="PMID:12588956"} property_value: RO:0001025 GO:0005604 {evidence="IDA", xref="PMID:14566019"} +property_value: RO:0001025 GO:0005604 {evidence="IDA", xref="PMID:12588956"} property_value: RO:0001025 GO:0005604 {evidence="IDA", xref="PMID:15895400"} property_value: RO:0001025 GO:0005604 {evidence="IDA", xref="PMID:18757743"} property_value: RO:0001025 GO:0005604 {evidence="IDA", xref="PMID:17596926"} @@ -97604,8 +97604,8 @@ property_value: RO:0002331 GO:0001809 {evidence="IDA", xref="PMID:15579591"} property_value: RO:0002331 GO:0002455 {evidence="IDA", xref="PMID:20382503"} property_value: RO:0002331 GO:0007339 {evidence="IMP", xref="PMID:11417900"} property_value: RO:0002331 GO:0007339 {evidence="IGI", xref="PMID:9609824"} -property_value: RO:0002331 GO:0035803 {evidence="IMP", xref="PMID:14645511"} property_value: RO:0002331 GO:0035803 {evidence="IMP", xref="PMID:18420282"} +property_value: RO:0002331 GO:0035803 {evidence="IMP", xref="PMID:14645511"} property_value: RO:0002331 GO:0048599 {evidence="IMP", xref="PMID:18420282"} property_value: RO:0002331 GO:0050729 {evidence="IDA", xref="PMID:18667753"} @@ -98069,11 +98069,11 @@ property_value: RO:0001025 GO:0005604 {evidence="IDA", xref="PMID:11511678"} property_value: RO:0001025 GO:0005604 {evidence="IDA", xref="PMID:8984825"} property_value: RO:0001025 GO:0016324 {evidence="IDA", xref="PMID:10742111"} property_value: RO:0001025 GO:0031012 {evidence="IDA", xref="PMID:22984613"} -property_value: RO:0001025 GO:0031012 {evidence="IDA", xref="PMID:11511678"} property_value: RO:0001025 GO:0031012 {evidence="IDA", xref="PMID:22821713"} +property_value: RO:0001025 GO:0031012 {evidence="IDA", xref="PMID:11511678"} property_value: RO:0001025 GO:0031012 {evidence="IDA", xref="PMID:2209468"} -property_value: RO:0001025 GO:0031012 {evidence="IDA", xref="PMID:15065125"} property_value: RO:0001025 GO:0031012 {evidence="IDA", xref="PMID:18559979"} +property_value: RO:0001025 GO:0031012 {evidence="IDA", xref="PMID:15065125"} property_value: RO:0001025 GO:0031012 {evidence="IDA", xref="PMID:9421166"} property_value: RO:0001025 GO:0031012 {evidence="IDA", xref="PMID:15728191"} property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:23658023"} @@ -98088,8 +98088,8 @@ name: Lysosome-associated membrane glycoprotein 1 is_a: PR:000000001 property_value: IAO:0000028 "LAMP1" xsd:string property_value: RO:0001025 GO:0005770 {evidence="IDA", xref="PMID:18767904"} -property_value: RO:0001025 GO:0005770 {evidence="IDA", xref="PMID:16542649"} property_value: RO:0001025 GO:0005770 {evidence="IDA", xref="PMID:15292400"} +property_value: RO:0001025 GO:0005770 {evidence="IDA", xref="PMID:16542649"} property_value: RO:0001025 GO:0005770 {evidence="IDA", xref="PMID:15792797"} property_value: RO:0001025 GO:0005770 {evidence="IDA", xref="PMID:15052268"} property_value: RO:0001025 GO:0005770 {evidence="IDA", xref="PMID:18388320"} @@ -98162,8 +98162,8 @@ property_value: RO:0002264 GO:0051450 {evidence="IMP", xref="PMID:12368211"} property_value: RO:0002264 GO:0051450 {evidence="IMP", xref="PMID:16962942"} property_value: RO:0002264 GO:0060047 {evidence="IMP", xref="PMID:12196344"} property_value: RO:0002327 GO:0004601 {evidence="IDA", xref="PMID:9126277"} -property_value: RO:0002327 GO:0004602 {evidence="IMP", xref="PMID:15182862"} property_value: RO:0002327 GO:0004602 {evidence="IDA", xref="PMID:12521604"} +property_value: RO:0002327 GO:0004602 {evidence="IMP", xref="PMID:15182862"} property_value: RO:0002327 GO:0004602 {evidence="IMP", xref="PMID:9788901"} property_value: RO:0002327 GO:0004602 {evidence="IMP", xref="PMID:11518697"} property_value: RO:0002327 GO:0004602 {evidence="IMP", xref="PMID:10490281"} @@ -98498,8 +98498,8 @@ property_value: RO:0002264 GO:0007159 {evidence="IMP", xref="PMID:8557754"} property_value: RO:0002264 GO:0007159 {evidence="IMP", xref="PMID:8117278"} property_value: RO:0002264 GO:0007411 {evidence="IMP", xref="PMID:12533613"} property_value: RO:0002264 GO:0007411 {evidence="IGI", xref="PMID:18550718"} -property_value: RO:0002264 GO:0007411 {evidence="IMP", xref="PMID:18550718"} property_value: RO:0002264 GO:0007411 {evidence="IDA", xref="PMID:18650339"} +property_value: RO:0002264 GO:0007411 {evidence="IMP", xref="PMID:18550718"} property_value: RO:0002264 GO:0031175 {evidence="IMP", xref="PMID:11283023"} property_value: RO:0002264 GO:0031175 {evidence="IDA", xref="PMID:11283023"} property_value: RO:0002432 GO:0042734 {evidence="IDA", xref="PMID:16537644"} @@ -98787,8 +98787,8 @@ property_value: BFO:0000050 GO:0070557 {evidence="IDA", xref="PMID:11595739"} property_value: BFO:0000050 GO:0070557 {evidence="IDA", xref="PMID:18794347"} property_value: IAO:0000028 "PCNA" xsd:string property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:24939902"} -property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:19736315"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:15494374"} +property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:19736315"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:19734146"} property_value: RO:0001025 GO:0005654 {evidence="IDA", xref="GO_REF:0000052"} property_value: RO:0001025 GO:0016604 {evidence="IDA", xref="GO_REF:0000052"} @@ -98900,8 +98900,8 @@ id: https://identifiers.org/uniprot:P12109 name: Collagen alpha-1(VI) chain is_a: PR:000000001 property_value: IAO:0000028 "COL6A1" xsd:string -property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:28675934"} property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:28327460"} +property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:28675934"} property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:25037231"} property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:23658023"} property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:27559042"} @@ -98917,8 +98917,8 @@ is_a: PR:000000001 property_value: IAO:0000028 "COL6A2" xsd:string property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:28675934"} property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:28327460"} -property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:28344315"} property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:27559042"} +property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:28344315"} property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:23658023"} property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:25037231"} property_value: RO:0002162 NCBITaxon:9606 @@ -98931,8 +98931,8 @@ name: Collagen alpha-3(VI) chain is_a: PR:000000001 property_value: IAO:0000028 "COL6A3" xsd:string property_value: RO:0001025 GO:0031012 {evidence="IDA", xref="PMID:18400749"} -property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:28327460"} property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:28675934"} +property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:28327460"} property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:27559042"} property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:23658023"} property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:25037231"} @@ -99119,8 +99119,8 @@ property_value: RO:0002264 GO:0001649 {evidence="IDA", xref="PMID:22705305"} property_value: RO:0002264 GO:0001837 {evidence="IDA", xref="PMID:15110716"} property_value: RO:0002264 GO:0035051 {evidence="IDA", xref="PMID:15110716"} property_value: RO:0002331 GO:0001649 {evidence="IDA", xref="PMID:15254224"} -property_value: RO:0002331 GO:0001649 {evidence="IDA", xref="PMID:23399447"} property_value: RO:0002331 GO:0001649 {evidence="IDA", xref="PMID:18436533"} +property_value: RO:0002331 GO:0001649 {evidence="IDA", xref="PMID:23399447"} property_value: RO:0002331 GO:0001649 {evidence="IDA", xref="PMID:20576608"} property_value: RO:0002331 GO:0001837 {evidence="IDA", xref="PMID:18184661"} property_value: RO:0002331 GO:0002062 {evidence="IDA", xref="PMID:16194878"} @@ -99245,8 +99245,8 @@ name: Ski oncogene is_a: PR:000000001 property_value: IAO:0000028 "SKI" xsd:string property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:17054724"} -property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:10049357"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:17510063"} +property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:10049357"} property_value: RO:0001025 GO:0005654 {evidence="IDA", xref="GO_REF:0000052"} property_value: RO:0001025 GO:0016604 {evidence="IDA", xref="GO_REF:0000052"} property_value: RO:0001025 GO:0016604 {evidence="IDA", xref="PMID:12874272"} @@ -99885,8 +99885,8 @@ is_a: PR:000000001 property_value: IAO:0000028 "VCAN" xsd:string property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:23658023"} property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:27559042"} -property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:28327460"} property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:28675934"} +property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:28327460"} property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:25037231"} property_value: RO:0002162 NCBITaxon:9606 property_value: RO:0002325 GO:0062023 {evidence="HDA", xref="PMID:20551380"} @@ -100080,8 +100080,8 @@ property_value: BFO:0000050 GO:0032398 {evidence="IDA", xref="PMID:25631937"} property_value: BFO:0000050 GO:0032398 {evidence="IDA", xref="PMID:9427624"} property_value: BFO:0000050 GO:0032398 {evidence="IDA", xref="PMID:30087334"} property_value: BFO:0000050 GO:0032398 {evidence="IDA", xref="PMID:23335510"} -property_value: BFO:0000050 GO:0042612 {evidence="IDA", xref="PMID:16474394"} property_value: BFO:0000050 GO:0042612 {evidence="IDA", xref="PMID:18448674"} +property_value: BFO:0000050 GO:0042612 {evidence="IDA", xref="PMID:16474394"} property_value: BFO:0000050 GO:0042612 {evidence="IDA", xref="PMID:12411439"} property_value: IAO:0000028 "HLA-E" xsd:string property_value: RO:0001025 GO:0009986 {evidence="IDA", xref="PMID:25631937"} @@ -100168,13 +100168,13 @@ property_value: RO:0001025 GO:0016323 {evidence="IDA", xref="PMID:21705333"} property_value: RO:0001025 GO:0016323 {evidence="IDA", xref="PMID:12958022"} property_value: RO:0001025 GO:0016323 {evidence="IDA", xref="PMID:2371270"} property_value: RO:0001025 GO:0016323 {evidence="IDA", xref="PMID:14592810"} -property_value: RO:0001025 GO:0016323 {evidence="IDA", xref="PMID:23341620"} property_value: RO:0001025 GO:0016323 {evidence="IDA", xref="PMID:18971331"} +property_value: RO:0001025 GO:0016323 {evidence="IDA", xref="PMID:23341620"} property_value: RO:0002162 NCBITaxon:10090 property_value: RO:0002327 GO:0140900 {evidence="IMP", xref="PMID:23341620"} property_value: RO:0002327 GO:0140900 {evidence="IDA", xref="PMID:2371270"} -property_value: RO:0002327 GO:0140900 {evidence="IMP", xref="PMID:24515893"} property_value: RO:0002327 GO:0140900 {evidence="IDA", xref="PMID:12958022"} +property_value: RO:0002327 GO:0140900 {evidence="IMP", xref="PMID:24515893"} property_value: RO:0002331 GO:0030316 {evidence="IMP", xref="PMID:18971331"} property_value: RO:0002331 GO:0043377 {evidence="IMP", xref="PMID:24515893"} property_value: RO:0002331 GO:0097186 {evidence="IDA", xref="PMID:26403673"} @@ -100436,10 +100436,10 @@ property_value: IAO:0000028 "Calr" xsd:string property_value: RO:0001025 GO:0005783 {evidence="IDA", xref="PMID:14517290"} property_value: RO:0001025 GO:0005783 {evidence="IDA", xref="PMID:15131110"} property_value: RO:0001025 GO:0005783 {evidence="IDA", xref="PMID:28053051"} -property_value: RO:0001025 GO:0005783 {evidence="IDA", xref="PMID:27435297"} property_value: RO:0001025 GO:0005783 {evidence="IDA", xref="PMID:12676993"} -property_value: RO:0001025 GO:0005783 {evidence="IDA", xref="PMID:21892174"} +property_value: RO:0001025 GO:0005783 {evidence="IDA", xref="PMID:27435297"} property_value: RO:0001025 GO:0005783 {evidence="IDA", xref="PMID:15977177"} +property_value: RO:0001025 GO:0005783 {evidence="IDA", xref="PMID:21892174"} property_value: RO:0001025 GO:0005783 {evidence="IDA", xref="PMID:23530063"} property_value: RO:0001025 GO:0005783 {evidence="IDA", xref="PMID:17923681"} property_value: RO:0001025 GO:0005783 {evidence="IDA", xref="PMID:21532570"} @@ -100636,8 +100636,8 @@ property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:12902470"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:9133426"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:15314074"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:1538753"} -property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:14990792"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:11754812"} +property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:14990792"} property_value: RO:0002162 NCBITaxon:10090 property_value: RO:0002263 GO:0001913 {evidence="IDA", xref="PMID:1538753"} property_value: RO:0002264 GO:0001916 {evidence="IDA", xref="PMID:16461341"} @@ -100710,8 +100710,8 @@ property_value: BFO:0000050 GO:0042613 {evidence="IDA", xref="PMID:11148202"} property_value: BFO:0000050 GO:0042613 {evidence="IDA", xref="PMID:8598040"} property_value: BFO:0000050 GO:0042613 {evidence="IDA", xref="PMID:8598041"} property_value: BFO:0000050 GO:0042613 {evidence="IDA", xref="PMID:7679955"} -property_value: BFO:0000050 GO:0042613 {evidence="IDA", xref="PMID:8638109"} property_value: BFO:0000050 GO:0042613 {evidence="IDA", xref="PMID:7985028"} +property_value: BFO:0000050 GO:0042613 {evidence="IDA", xref="PMID:8638109"} property_value: IAO:0000028 "H2-Aa" xsd:string property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:7679955"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:8638109"} @@ -100774,8 +100774,8 @@ property_value: BFO:0000050 GO:0042613 {evidence="IDA", xref="PMID:11148202"} property_value: BFO:0000050 GO:0042613 {evidence="IDA", xref="PMID:9492004"} property_value: BFO:0000050 GO:0042613 {evidence="IDA", xref="PMID:8598041"} property_value: BFO:0000050 GO:0042613 {evidence="IDA", xref="PMID:8598040"} -property_value: BFO:0000050 GO:0042613 {evidence="IDA", xref="PMID:7985028"} property_value: BFO:0000050 GO:0042613 {evidence="IDA", xref="PMID:8638109"} +property_value: BFO:0000050 GO:0042613 {evidence="IDA", xref="PMID:7985028"} property_value: IAO:0000028 "H2-Aa" xsd:string property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:8638109"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:9492004"} @@ -100801,8 +100801,8 @@ property_value: RO:0002264 GO:0048002 {evidence="IDA", xref="PMID:11069069"} id: https://identifiers.org/uniprot:P14438 name: H-2 class II histocompatibility antigen, A-U alpha chain is_a: PR:000000001 -property_value: BFO:0000050 GO:0042613 {evidence="IDA", xref="PMID:8638109"} property_value: BFO:0000050 GO:0042613 {evidence="IDA", xref="PMID:7985028"} +property_value: BFO:0000050 GO:0042613 {evidence="IDA", xref="PMID:8638109"} property_value: BFO:0000050 GO:0042613 {evidence="IDA", xref="PMID:7679955"} property_value: BFO:0000050 GO:0042613 {evidence="IDA", xref="PMID:9492004"} property_value: BFO:0000050 GO:0042613 {evidence="IDA", xref="PMID:11148202"} @@ -100848,8 +100848,8 @@ id: https://identifiers.org/uniprot:P14483 name: H-2 class II histocompatibility antigen, A beta chain is_a: PR:000000001 property_value: BFO:0000050 GO:0042613 {evidence="IDA", xref="PMID:9492004"} -property_value: BFO:0000050 GO:0042613 {evidence="IDA", xref="PMID:7985028"} property_value: BFO:0000050 GO:0042613 {evidence="IDA", xref="PMID:8638109"} +property_value: BFO:0000050 GO:0042613 {evidence="IDA", xref="PMID:7985028"} property_value: BFO:0000050 GO:0042613 {evidence="IDA", xref="PMID:7679955"} property_value: BFO:0000050 GO:0042613 {evidence="IDA", xref="PMID:9432982"} property_value: BFO:0000050 GO:0042613 {evidence="IDA", xref="PMID:8598040"} @@ -100884,8 +100884,8 @@ property_value: RO:0002331 GO:0002344 {evidence="IDA", xref="PMID:1378867"} property_value: RO:0002331 GO:0002827 {evidence="IDA", xref="PMID:14607905"} property_value: RO:0002331 GO:0071346 {evidence="IDA", xref="PMID:9244347"} property_value: RO:0002331 GO:0071346 {evidence="IDA", xref="PMID:2502420"} -property_value: RO:0002331 GO:0071346 {evidence="IDA", xref="PMID:1845803"} property_value: RO:0002331 GO:0071346 {evidence="IDA", xref="PMID:2493384"} +property_value: RO:0002331 GO:0071346 {evidence="IDA", xref="PMID:1845803"} property_value: RO:0002331 GO:0071346 {evidence="IDA", xref="PMID:7691725"} [Term] @@ -100936,8 +100936,8 @@ is_a: PR:000000001 property_value: IAO:0000028 "PKM" xsd:string property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:17308100"} property_value: RO:0001025 GO:0005634 {evidence="HDA", xref="PMID:21630459"} -property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:18191611"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:27573352"} +property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:18191611"} property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:23658023"} property_value: RO:0002162 NCBITaxon:9606 property_value: RO:0002331 GO:1903672 {evidence="IMP", xref="PMID:27199445"} @@ -101140,8 +101140,8 @@ is_a: PR:000000001 property_value: BFO:0000050 GO:0090575 {evidence="IMP", xref="PMID:11380252"} property_value: BFO:0000050 GO:0090575 {evidence="IMP", xref="PMID:10329190"} property_value: IAO:0000028 "POU2F1" xsd:string -property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:11891224"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:9242494"} +property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:11891224"} property_value: RO:0001025 GO:0005654 {evidence="IDA", xref="GO_REF:0000052"} property_value: RO:0001025 GO:0005783 {evidence="IDA", xref="GO_REF:0000052"} property_value: RO:0002162 NCBITaxon:9606 @@ -101611,8 +101611,8 @@ property_value: RO:0001025 GO:0005902 {evidence="IDA", xref="PMID:9472040"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:16203996"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:8769481"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:16973387"} -property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:18958875"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:15843532"} +property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:18958875"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:15728238"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:10943842"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:20711497"} @@ -101635,8 +101635,8 @@ property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:19008373"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:21708977"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:9133426"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:14609575"} -property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:7584142"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:17082577"} +property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:7584142"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:21460847"} property_value: RO:0001025 GO:0009986 {evidence="IDA", xref="PMID:17716972"} property_value: RO:0001025 GO:0009986 {evidence="IDA", xref="PMID:9324354"} @@ -101776,8 +101776,8 @@ name: Elastin is_a: PR:000000001 property_value: IAO:0000028 "ELN" xsd:string property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:25037231"} -property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:28327460"} property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:28675934"} +property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:28327460"} property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:27559042"} property_value: RO:0001025 GO:0071953 {evidence="IDA", xref="PMID:10424889"} property_value: RO:0001025 GO:0071953 {evidence="IDA", xref="PMID:7534784"} @@ -101978,8 +101978,8 @@ property_value: RO:0002331 GO:0035767 {evidence="IDA", xref="PMID:18440775"} property_value: RO:0002331 GO:0035767 {evidence="IDA", xref="PMID:21245381"} property_value: RO:0002331 GO:0043117 {evidence="IDA", xref="PMID:26598555"} property_value: RO:0002331 GO:0045766 {evidence="IDA", xref="PMID:18440775"} -property_value: RO:0002331 GO:0045766 {evidence="IDA", xref="PMID:19033661"} property_value: RO:0002331 GO:0045766 {evidence="IMP", xref="PMID:18275976"} +property_value: RO:0002331 GO:0045766 {evidence="IDA", xref="PMID:19033661"} property_value: RO:0002331 GO:0045766 {evidence="IDA", xref="PMID:18577655"} property_value: RO:0002331 GO:0045766 {evidence="IDA", xref="PMID:20497126"} property_value: RO:0002331 GO:1903672 {evidence="IGI", xref="PMID:25251394"} @@ -102355,8 +102355,8 @@ property_value: IAO:0000028 "H2AX" xsd:string property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:11331621"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:19734146"} property_value: RO:0001025 GO:0005634 {evidence="HDA", xref="PMID:21630459"} -property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:17974976"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:23235539"} +property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:17974976"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:16319397"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:15604234"} property_value: RO:0001025 GO:0005634 {evidence="IMP", xref="PMID:24507776"} @@ -102537,8 +102537,8 @@ id: https://identifiers.org/uniprot:P16298 name: Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform is_a: PR:000000001 property_value: BFO:0000050 GO:0005955 {evidence="IDA", xref="PMID:26794871"} -property_value: BFO:0000050 GO:0005955 {evidence="IDA", xref="PMID:8524402"} property_value: BFO:0000050 GO:0005955 {evidence="IDA", xref="PMID:22688515"} +property_value: BFO:0000050 GO:0005955 {evidence="IDA", xref="PMID:8524402"} property_value: IAO:0000028 "PPP3CB" xsd:string property_value: RO:0002162 NCBITaxon:9606 @@ -102863,8 +102863,8 @@ property_value: RO:0002264 GO:0022011 {evidence="IGI", xref="PMID:29315582"} property_value: RO:0002264 GO:0022011 {evidence="IMP", xref="PMID:16436605"} property_value: RO:0002264 GO:0030913 {evidence="IMP", xref="PMID:16436605"} property_value: RO:0002264 GO:0032288 {evidence="IMP", xref="PMID:16405874"} -property_value: RO:0002264 GO:0032288 {evidence="IMP", xref="PMID:27583434"} property_value: RO:0002264 GO:0032288 {evidence="IMP", xref="PMID:20071523"} +property_value: RO:0002264 GO:0032288 {evidence="IMP", xref="PMID:27583434"} property_value: RO:0002264 GO:0032288 {evidence="IMP", xref="PMID:20427655"} property_value: RO:0002264 GO:0032288 {evidence="IMP", xref="PMID:25453108"} property_value: RO:0002264 GO:0036135 {evidence="IMP", xref="PMID:25429154"} @@ -103166,8 +103166,8 @@ property_value: RO:0002162 NCBITaxon:9606 property_value: RO:0002327 GO:0004905 {evidence="IMP", xref="PMID:35442418"} property_value: RO:0002327 GO:0004905 {evidence="IDA", xref="PMID:7665574"} property_value: RO:0002327 GO:0004905 {evidence="IDA", xref="PMID:21854986"} -property_value: RO:0002327 GO:0004905 {evidence="IDA", xref="PMID:7813427"} property_value: RO:0002327 GO:0004905 {evidence="IMP", xref="PMID:31270247"} +property_value: RO:0002327 GO:0004905 {evidence="IDA", xref="PMID:7813427"} property_value: RO:0002327 GO:0004905 {evidence="IMP", xref="PMID:33252644"} property_value: RO:0002331 GO:0060337 {evidence="IDA", xref="PMID:7665574"} property_value: RO:0002331 GO:0060337 {evidence="IDA", xref="PMID:21854986"} @@ -103563,8 +103563,8 @@ property_value: RO:0002264 GO:0030218 {evidence="IMP", xref="PMID:1987478"} property_value: RO:0002264 GO:0030218 {evidence="IMP", xref="PMID:9576834"} property_value: RO:0002264 GO:0030218 {evidence="IMP", xref="PMID:7867497"} property_value: RO:0002264 GO:0030218 {evidence="IMP", xref="PMID:1302015"} -property_value: RO:0002264 GO:0030219 {evidence="IMP", xref="PMID:9233806"} property_value: RO:0002264 GO:0030219 {evidence="IGI", xref="PMID:9230307"} +property_value: RO:0002264 GO:0030219 {evidence="IMP", xref="PMID:9233806"} property_value: RO:0002264 GO:0030219 {evidence="IDA", xref="PMID:9427697"} property_value: RO:0002264 GO:0030220 {evidence="IMP", xref="PMID:9233806"} property_value: RO:0002264 GO:0035162 {evidence="IMP", xref="PMID:9576834"} @@ -103724,8 +103724,8 @@ property_value: RO:0001025 GO:0001673 {evidence="IDA", xref="PMID:12638230"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:20531390"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:19023449"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:18692037"} -property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:12040017"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:23284756"} +property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:12040017"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:12203718"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:11981756"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:11942627"} @@ -104258,8 +104258,8 @@ property_value: RO:0001025 GO:0016324 {evidence="IDA", xref="PMID:14625387"} property_value: RO:0002162 NCBITaxon:10090 property_value: RO:0002264 GO:0001993 {evidence="IMP", xref="PMID:10358008"} property_value: RO:0002264 GO:0002025 {evidence="IMP", xref="PMID:10358009"} -property_value: RO:0002264 GO:0002025 {evidence="IGI", xref="PMID:10358009"} property_value: RO:0002264 GO:0002025 {evidence="IGI", xref="PMID:11641423"} +property_value: RO:0002264 GO:0002025 {evidence="IGI", xref="PMID:10358009"} property_value: RO:0002264 GO:0045453 {evidence="IMP", xref="PMID:15724149"} property_value: RO:0002264 GO:0050873 {evidence="IGI", xref="PMID:12387862"} property_value: RO:0002432 GO:0098992 {evidence="EXP", xref="PMID:21321602"} @@ -104560,8 +104560,8 @@ property_value: BFO:0000050 GO:0005606 {evidence="IDA", xref="PMID:9264260"} property_value: BFO:0000050 GO:0043256 {evidence="IDA", xref="PMID:8034675"} property_value: IAO:0000028 "Lama1" xsd:string property_value: RO:0001025 GO:0005604 {evidence="IDA", xref="PMID:15895400"} -property_value: RO:0001025 GO:0005604 {evidence="IDA", xref="PMID:12670870"} property_value: RO:0001025 GO:0005604 {evidence="IDA", xref="PMID:21146513"} +property_value: RO:0001025 GO:0005604 {evidence="IDA", xref="PMID:12670870"} property_value: RO:0001025 GO:0005604 {evidence="IDA", xref="PMID:11511678"} property_value: RO:0001025 GO:0005604 {evidence="IDA", xref="PMID:1292752"} property_value: RO:0001025 GO:0005604 {evidence="IDA", xref="PMID:9299121"} @@ -104729,8 +104729,8 @@ property_value: IAO:0000028 "NCL" xsd:string property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:15121898"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:24071584"} property_value: RO:0001025 GO:0005654 {evidence="IDA", xref="GO_REF:0000052"} -property_value: RO:0001025 GO:0005730 {evidence="IDA", xref="PMID:12944467"} property_value: RO:0001025 GO:0005730 {evidence="IDA", xref="GO_REF:0000052"} +property_value: RO:0001025 GO:0005730 {evidence="IDA", xref="PMID:12944467"} property_value: RO:0001025 GO:0005730 {evidence="IDA", xref="PMID:19393617"} property_value: RO:0001025 GO:0005730 {evidence="IDA", xref="PMID:24071584"} property_value: RO:0002162 NCBITaxon:9606 @@ -104760,8 +104760,8 @@ is_a: PR:000000001 property_value: BFO:0000050 GO:0005665 {evidence="IDA", xref="PMID:9852112"} property_value: BFO:0000050 GO:0005666 {evidence="IDA", xref="PMID:33335104"} property_value: BFO:0000050 GO:0005666 {evidence="IDA", xref="PMID:34675218"} -property_value: BFO:0000050 GO:0005736 {evidence="IDA", xref="PMID:34671025"} property_value: BFO:0000050 GO:0005736 {evidence="IDA", xref="PMID:36271492"} +property_value: BFO:0000050 GO:0005736 {evidence="IDA", xref="PMID:34671025"} property_value: IAO:0000028 "POLR2E" xsd:string property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:9852112"} property_value: RO:0001025 GO:0005654 {evidence="IDA", xref="GO_REF:0000052"} @@ -104840,8 +104840,8 @@ name: Transcription factor EB is_a: PR:000000001 property_value: IAO:0000028 "TFEB" xsd:string property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:27278822"} -property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:21617040"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:28552616"} +property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:21617040"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:22576015"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:19556463"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:22343943"} @@ -105278,8 +105278,8 @@ name: TATA-box-binding protein is_a: PR:000000001 property_value: BFO:0000050 GO:0005634 {evidence="EXP", xref="PMID:23332750"} property_value: BFO:0000050 GO:0005668 {evidence="IDA", xref="PMID:11250903"} -property_value: BFO:0000050 GO:0005669 {evidence="IDA", xref="PMID:7729427"} property_value: BFO:0000050 GO:0005669 {evidence="IDA", xref="PMID:14580349"} +property_value: BFO:0000050 GO:0005669 {evidence="IDA", xref="PMID:7729427"} property_value: BFO:0000050 GO:0005669 {evidence="IDA", xref="PMID:29111974"} property_value: BFO:0000050 GO:0005669 {evidence="IDA", xref="PMID:27193682"} property_value: BFO:0000050 GO:0005669 {evidence="IDA", xref="PMID:27007846"} @@ -105350,22 +105350,22 @@ property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:24315442"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:22992956"} property_value: RO:0001025 GO:0005634 {evidence="IMP", xref="PMID:23376973"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:16325584"} -property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:15525667"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:18425773"} +property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:15525667"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:16611995"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:19915186"} -property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:22948967"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:14502573"} +property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:22948967"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:18423437"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:21258368"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:18755297"} property_value: RO:0001025 GO:0005634 {evidence="IMP", xref="PMID:29153991"} -property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:20123909"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:7969117"} +property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:20123909"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:18448678"} -property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:18662995"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:15183310"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:25335925"} +property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:18662995"} property_value: RO:0001025 GO:0005654 {evidence="IDA", xref="PMID:21076177"} property_value: RO:0001025 GO:0005730 {evidence="IDA", xref="PMID:19480014"} property_value: RO:0001025 GO:0043073 {evidence="IDA", xref="PMID:12641567"} @@ -105435,8 +105435,8 @@ is_a: PR:000000001 property_value: IAO:0000028 "Tbxt" xsd:string property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:8293872"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:16801560"} -property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:19796622"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:7588606"} +property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:19796622"} property_value: RO:0002162 NCBITaxon:10090 property_value: RO:0002263 GO:0008283 {evidence="IMP", xref="PMID:16835439"} property_value: RO:0002264 GO:0001570 {evidence="IMP", xref="PMID:16835439"} @@ -105508,8 +105508,8 @@ name: Ras-related protein Rab-6A is_a: PR:000000001 property_value: IAO:0000028 "RAB6A" xsd:string property_value: RO:0001025 GO:0000139 {evidence="IDA", xref="PMID:25962623"} -property_value: RO:0001025 GO:0005794 {evidence="IDA", xref="PMID:23091056"} property_value: RO:0001025 GO:0005794 {evidence="IDA", xref="PMID:18243103"} +property_value: RO:0001025 GO:0005794 {evidence="IDA", xref="PMID:23091056"} property_value: RO:0001025 GO:0005794 {evidence="IDA", xref="GO_REF:0000052"} property_value: RO:0001025 GO:0005794 {evidence="IDA", xref="PMID:17562788"} property_value: RO:0001025 GO:0005794 {evidence="IDA", xref="PMID:11121396"} @@ -105530,9 +105530,9 @@ property_value: RO:0001025 GO:0014069 {evidence="IDA", xref="PMID:17114649"} property_value: RO:0001025 GO:0030425 {evidence="IDA", xref="PMID:12074840"} property_value: RO:0001025 GO:0030425 {evidence="IDA", xref="PMID:15255972"} property_value: RO:0001025 GO:0030425 {evidence="IDA", xref="PMID:19208628"} +property_value: RO:0001025 GO:0030425 {evidence="IDA", xref="PMID:24554721"} property_value: RO:0001025 GO:0030425 {evidence="IDA", xref="PMID:22022532"} property_value: RO:0001025 GO:0030425 {evidence="IDA", xref="PMID:22523538"} -property_value: RO:0001025 GO:0030425 {evidence="IDA", xref="PMID:24554721"} property_value: RO:0001025 GO:0030425 {evidence="IDA", xref="PMID:24035762"} property_value: RO:0001025 GO:0030425 {evidence="IDA", xref="PMID:16980967"} property_value: RO:0001025 GO:0030425 {evidence="IDA", xref="PMID:17984326"} @@ -105797,10 +105797,10 @@ name: Low affinity immunoglobulin epsilon Fc receptor is_a: PR:000000001 property_value: IAO:0000028 "Fcer2" xsd:string property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:11435465"} -property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:14662849"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:15909309"} -property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:8418208"} +property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:14662849"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:8041705"} +property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:8418208"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:12882831"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:8566034"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:19414760"} @@ -106133,8 +106133,8 @@ is_a: PR:000000001 property_value: BFO:0000050 GO:0033001 {evidence="IDA", xref="PMID:1825220"} property_value: BFO:0000050 GO:0033001 {evidence="IDA", xref="PMID:28652325"} property_value: BFO:0000050 GO:0042101 {evidence="IDA", xref="PMID:8176201"} -property_value: BFO:0000050 GO:0042105 {evidence="IDA", xref="PMID:9485181"} property_value: BFO:0000050 GO:0042105 {evidence="IPI", xref="PMID:31461748"} +property_value: BFO:0000050 GO:0042105 {evidence="IDA", xref="PMID:9485181"} property_value: IAO:0000028 "CD247" xsd:string property_value: RO:0002162 NCBITaxon:9606 property_value: RO:0002331 GO:0038094 {evidence="IDA", xref="PMID:8478617"} @@ -106603,8 +106603,8 @@ property_value: RO:0001025 GO:0062023 {evidence="IDA", xref="PMID:19246320"} property_value: RO:0002162 NCBITaxon:9606 property_value: RO:0002327 GO:0005201 {evidence="HDA", xref="PMID:28344315"} property_value: RO:0002331 GO:0002922 {evidence="IDA", xref="PMID:19004505"} -property_value: RO:0002331 GO:0007339 {evidence="IDA", xref="PMID:19700799"} property_value: RO:0002331 GO:0007339 {evidence="IMP", xref="PMID:19004505"} +property_value: RO:0002331 GO:0007339 {evidence="IDA", xref="PMID:19700799"} property_value: RO:0002331 GO:0007339 {evidence="IDA", xref="PMID:19246320"} property_value: RO:0002331 GO:0007339 {evidence="IGI", xref="PMID:9609824"} @@ -106723,8 +106723,8 @@ property_value: IAO:0000028 "BGN" xsd:string property_value: RO:0001025 GO:0009986 {evidence="IDA", xref="PMID:2212616"} property_value: RO:0001025 GO:0030133 {evidence="IDA", xref="GO_REF:0000054"} property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:25037231"} -property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:28327460"} property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:28675934"} +property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:28327460"} property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:27559042"} property_value: RO:0002162 NCBITaxon:9606 property_value: RO:0002325 GO:0062023 {evidence="HDA", xref="PMID:20551380"} @@ -107141,8 +107141,8 @@ property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:2263635"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:8330635"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:8598044"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:2044952"} -property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:1685988"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:17272516"} +property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:1685988"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:12367519"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:16223943"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:14656222"} @@ -107263,9 +107263,9 @@ is_a: PR:000000001 property_value: IAO:0000028 "USF1" xsd:string property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:18234320"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:2249772"} -property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:15358760"} -property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="GO_REF:0000054"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:8576131"} +property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="GO_REF:0000054"} +property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:15358760"} property_value: RO:0001025 GO:0005654 {evidence="IDA", xref="GO_REF:0000052"} property_value: RO:0001025 GO:0005794 {evidence="IDA", xref="GO_REF:0000052"} property_value: RO:0002162 NCBITaxon:9606 @@ -108073,8 +108073,8 @@ property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:19460357"} property_value: RO:0001025 GO:0005634 {evidence="IMP", xref="PMID:21871177"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:18045535"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:19059439"} -property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:17560175"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:20041225"} +property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:17560175"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:16814409"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:14988002"} property_value: RO:0001025 GO:0005634 {evidence="IMP", xref="PMID:21399639"} @@ -108229,8 +108229,8 @@ property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:17332504"} property_value: RO:0001025 GO:0005654 {evidence="IDA", xref="GO_REF:0000052"} property_value: RO:0001025 GO:0016604 {evidence="IDA", xref="GO_REF:0000052"} property_value: RO:0001025 GO:0016605 {evidence="IDA", xref="PMID:9230084"} -property_value: RO:0001025 GO:0016605 {evidence="IDA", xref="PMID:15247905"} property_value: RO:0001025 GO:0016605 {evidence="IDA", xref="PMID:17332504"} +property_value: RO:0001025 GO:0016605 {evidence="IDA", xref="PMID:15247905"} property_value: RO:0001025 GO:0016605 {evidence="IDA", xref="PMID:17245429"} property_value: RO:0001025 GO:0016605 {evidence="IDA", xref="PMID:12470659"} property_value: RO:0001025 GO:0016605 {evidence="IDA", xref="PMID:14647468"} @@ -108646,8 +108646,8 @@ id: https://identifiers.org/uniprot:P23949 name: mRNA decay activator protein ZFP36L2 is_a: PR:000000001 property_value: IAO:0000028 "Zfp36l2" xsd:string -property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:24733888"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:22367205"} +property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:24733888"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:11796723"} property_value: RO:0002162 NCBITaxon:10090 property_value: RO:0002264 GO:0030097 {evidence="IMP", xref="PMID:19633199"} @@ -108736,8 +108736,8 @@ property_value: RO:0002162 NCBITaxon:10090 property_value: RO:0002327 GO:0004096 {evidence="IMP", xref="PMID:5929246"} property_value: RO:0002327 GO:0004096 {evidence="IDA", xref="PMID:15317809"} property_value: RO:0002327 GO:0004096 {evidence="IDA", xref="PMID:12521604"} -property_value: RO:0002327 GO:0004096 {evidence="IMP", xref="PMID:4975476"} property_value: RO:0002327 GO:0004096 {evidence="IDA", xref="PMID:9600348"} +property_value: RO:0002327 GO:0004096 {evidence="IMP", xref="PMID:4975476"} property_value: RO:0002327 GO:0004096 {evidence="IDA", xref="PMID:17275685"} property_value: RO:0002327 GO:0004096 {evidence="IMP", xref="PMID:642030"} property_value: RO:0002327 GO:0004096 {evidence="IDA", xref="PMID:12646716"} @@ -108795,8 +108795,8 @@ id: https://identifiers.org/uniprot:P24385 name: G1/S-specific cyclin-D1 is_a: PR:000000001 property_value: IAO:0000028 "CCND1" xsd:string -property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:11793365"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:20399237"} +property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:11793365"} property_value: RO:0001025 GO:0005654 {evidence="IDA", xref="GO_REF:0000052"} property_value: RO:0002162 NCBITaxon:9606 property_value: RO:0002331 GO:0000082 {evidence="IDA", xref="PMID:33854232"} @@ -108813,8 +108813,8 @@ property_value: IAO:0000028 "CRHBP" xsd:string property_value: RO:0001025 GO:0030141 {evidence="IDA", xref="PMID:21624661"} property_value: RO:0002162 NCBITaxon:9606 property_value: RO:0002331 GO:0006954 {evidence="IDA", xref="PMID:18559919"} -property_value: RO:0002331 GO:0007565 {evidence="IEP", xref="PMID:1846945"} property_value: RO:0002331 GO:0007565 {evidence="IDA", xref="PMID:18559919"} +property_value: RO:0002331 GO:0007565 {evidence="IEP", xref="PMID:1846945"} property_value: RO:0002331 GO:0045055 {evidence="IDA", xref="PMID:21624661"} [Term] @@ -109045,12 +109045,12 @@ property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:1346270"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:19487454"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:8125140"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:7477352"} -property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:7795661"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:19299737"} +property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:7795661"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:8920854"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:7774619"} -property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:12882831"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:15477346"} +property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:12882831"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:1385153"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:9028339"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:10365441"} @@ -109102,8 +109102,8 @@ property_value: BFO:0000050 GO:0062023 {evidence="IDA", xref="PMID:23658023"} property_value: IAO:0000028 "TNC" xsd:string property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:23658023"} property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:27559042"} -property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:28327460"} property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:28675934"} +property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:28327460"} property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:25037231"} property_value: RO:0002162 NCBITaxon:9606 property_value: RO:0002325 GO:0062023 {evidence="HDA", xref="PMID:20551380"} @@ -110527,9 +110527,9 @@ property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:8566034"} property_value: RO:0001025 GO:0009986 {evidence="IDA", xref="PMID:20685650"} property_value: RO:0002162 NCBITaxon:10090 property_value: RO:0002263 GO:0042100 {evidence="IDA", xref="PMID:11894097"} -property_value: RO:0002263 GO:0042100 {evidence="IDA", xref="PMID:10979977"} property_value: RO:0002263 GO:0042100 {evidence="IDA", xref="PMID:8666928"} property_value: RO:0002263 GO:0042100 {evidence="IDA", xref="PMID:14607964"} +property_value: RO:0002263 GO:0042100 {evidence="IDA", xref="PMID:10979977"} property_value: RO:0002263 GO:0042100 {evidence="IDA", xref="PMID:8920854"} property_value: RO:0002263 GO:0042100 {evidence="IGI", xref="PMID:15963492"} property_value: RO:0002264 GO:0002768 {evidence="IDA", xref="PMID:15240714"} @@ -110705,9 +110705,9 @@ property_value: RO:0001025 GO:0001673 {evidence="IDA", xref="PMID:19176879"} property_value: RO:0001025 GO:0001673 {evidence="IDA", xref="PMID:17475928"} property_value: RO:0001025 GO:0001673 {evidence="IDA", xref="PMID:17696610"} property_value: RO:0001025 GO:0001673 {evidence="IDA", xref="PMID:14611631"} -property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:20360685"} -property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:21991325"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:22297488"} +property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:21991325"} +property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:20360685"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:21911473"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:20516196"} property_value: RO:0002162 NCBITaxon:10090 @@ -110737,8 +110737,8 @@ id: https://identifiers.org/uniprot:P27694 name: Replication protein A 70 kDa DNA-binding subunit is_a: PR:000000001 property_value: BFO:0000050 GO:0005662 {evidence="IPI", xref="PMID:7760808"} -property_value: BFO:0000050 GO:0005662 {evidence="IDA", xref="PMID:11927569"} property_value: BFO:0000050 GO:0005662 {evidence="IDA", xref="PMID:27723717"} +property_value: BFO:0000050 GO:0005662 {evidence="IDA", xref="PMID:11927569"} property_value: BFO:0000050 GO:0005662 {evidence="IPI", xref="PMID:11927569"} property_value: BFO:0000050 GO:0005662 {evidence="IDA", xref="PMID:27723720"} property_value: IAO:0000028 "RPA1" xsd:string @@ -110907,8 +110907,8 @@ property_value: IAO:0000028 "Klrb1c" xsd:string property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:16973387"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:14990792"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:10229828"} -property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:14607906"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:1506685"} +property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:14607906"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:16455951"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:23034280"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:9133426"} @@ -110952,10 +110952,10 @@ is_a: PR:000000001 property_value: IAO:0000028 "CANX" xsd:string property_value: RO:0001025 GO:0005783 {evidence="IDA", xref="GO_REF:0000052"} property_value: RO:0001025 GO:0005783 {evidence="IDA", xref="PMID:21190736"} -property_value: RO:0001025 GO:0005783 {evidence="IDA", xref="PMID:24454821"} property_value: RO:0001025 GO:0005783 {evidence="IDA", xref="PMID:24263861"} -property_value: RO:0001025 GO:0005783 {evidence="IDA", xref="PMID:22572157"} +property_value: RO:0001025 GO:0005783 {evidence="IDA", xref="PMID:24454821"} property_value: RO:0001025 GO:0005783 {evidence="IDA", xref="PMID:30188326"} +property_value: RO:0001025 GO:0005783 {evidence="IDA", xref="PMID:22572157"} property_value: RO:0001025 GO:0005783 {evidence="IDA", xref="PMID:23826168"} property_value: RO:0001025 GO:0005783 {evidence="IDA", xref="PMID:14966132"} property_value: RO:0001025 GO:0005783 {evidence="IDA", xref="PMID:18458083"} @@ -110983,8 +110983,8 @@ name: Hepatocyte nuclear factor 1-beta is_a: PR:000000001 property_value: IAO:0000028 "Hnf1b" xsd:string property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:1685988"} -property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:1363228"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:15509593"} +property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:1363228"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:2044952"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:8598044"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:15647252"} @@ -111061,11 +111061,11 @@ property_value: BFO:0000050 GO:1990647 {evidence="IPI", xref="PMID:17264204"} property_value: IAO:0000028 "Cebpb" xsd:string property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:11733516"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:15519652"} -property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:15870285"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:18824566"} +property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:15870285"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:12821655"} -property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:12871593"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:15509789"} +property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:12871593"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:10588870"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:11940593"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:21122806"} @@ -111584,11 +111584,11 @@ property_value: BFO:0000050 GO:0005585 {evidence="IMP", xref="PMID:7276808"} property_value: IAO:0000028 "Col2a1" xsd:string property_value: RO:0001025 GO:0005604 {evidence="IDA", xref="PMID:11273670"} property_value: RO:0001025 GO:0031012 {evidence="IDA", xref="PMID:23900597"} -property_value: RO:0001025 GO:0031012 {evidence="IDA", xref="PMID:21624478"} property_value: RO:0001025 GO:0031012 {evidence="IDA", xref="PMID:22206015"} +property_value: RO:0001025 GO:0031012 {evidence="IDA", xref="PMID:21624478"} property_value: RO:0001025 GO:0031012 {evidence="IDA", xref="PMID:1879364"} -property_value: RO:0001025 GO:0031012 {evidence="IDA", xref="PMID:16079159"} property_value: RO:0001025 GO:0031012 {evidence="IDA", xref="PMID:24191021"} +property_value: RO:0001025 GO:0031012 {evidence="IDA", xref="PMID:16079159"} property_value: RO:0001025 GO:0031012 {evidence="IDA", xref="PMID:9449075"} property_value: RO:0002162 NCBITaxon:10090 property_value: RO:0002264 GO:0002062 {evidence="IMP", xref="PMID:7590256"} @@ -112089,8 +112089,8 @@ property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:15927180"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:12471023"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:17242199"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:11861477"} -property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:16522640"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:22194471"} +property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:16522640"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:17641088"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:18722179"} property_value: RO:0001025 GO:0045120 {evidence="IDA", xref="PMID:16822332"} @@ -112422,8 +112422,8 @@ name: Caspase-1 is_a: PR:000000001 property_value: IAO:0000028 "CASP1" xsd:string property_value: RO:0002162 NCBITaxon:9606 -property_value: RO:0002331 GO:0050729 {evidence="IDA", xref="PMID:32109412"} property_value: RO:0002331 GO:0050729 {evidence="IDA", xref="PMID:12191486"} +property_value: RO:0002331 GO:0050729 {evidence="IDA", xref="PMID:32109412"} property_value: RO:0002331 GO:0050729 {evidence="IDA", xref="PMID:32553275"} property_value: RO:0002331 GO:0050729 {evidence="IDA", xref="PMID:15326478"} property_value: RO:0002331 GO:0070269 {evidence="IDA", xref="PMID:32553275"} @@ -112470,8 +112470,8 @@ id: https://identifiers.org/uniprot:P29508 name: Serpin B3 is_a: PR:000000001 property_value: IAO:0000028 "SERPINB3" xsd:string -property_value: RO:0001025 GO:0005634 {evidence="HDA", xref="PMID:21630459"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:21383048"} +property_value: RO:0001025 GO:0005634 {evidence="HDA", xref="PMID:21630459"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:20527027"} property_value: RO:0002162 NCBITaxon:9606 @@ -112504,8 +112504,8 @@ property_value: RO:0001025 GO:0005654 {evidence="IDA", xref="PMID:12915590"} property_value: RO:0001025 GO:0005730 {evidence="IDA", xref="PMID:15195100"} property_value: RO:0001025 GO:0016605 {evidence="IDA", xref="PMID:36373674"} property_value: RO:0001025 GO:0016605 {evidence="IDA", xref="PMID:15195100"} -property_value: RO:0001025 GO:0016605 {evidence="IDA", xref="PMID:9448006"} property_value: RO:0001025 GO:0016605 {evidence="IDA", xref="PMID:17081985"} +property_value: RO:0001025 GO:0016605 {evidence="IDA", xref="PMID:9448006"} property_value: RO:0001025 GO:0016605 {evidence="IDA", xref="PMID:22869143"} property_value: RO:0001025 GO:0016605 {evidence="IDA", xref="PMID:9412458"} property_value: RO:0001025 GO:0016605 {evidence="IDA", xref="PMID:10910364"} @@ -112630,8 +112630,8 @@ id: https://identifiers.org/uniprot:P29812 name: L-dopachrome tautomerase is_a: PR:000000001 property_value: IAO:0000028 "Dct" xsd:string -property_value: RO:0001025 GO:0042470 {evidence="IDA", xref="PMID:2169885"} property_value: RO:0001025 GO:0042470 {evidence="IDA", xref="PMID:26620560"} +property_value: RO:0001025 GO:0042470 {evidence="IDA", xref="PMID:2169885"} property_value: RO:0002162 NCBITaxon:10090 property_value: RO:0002263 GO:0007405 {evidence="IMP", xref="PMID:16857183"} property_value: RO:0002264 GO:0021847 {evidence="IMP", xref="PMID:16857183"} @@ -112932,8 +112932,8 @@ id: https://identifiers.org/uniprot:P30282 name: G1/S-specific cyclin-D3 is_a: PR:000000001 property_value: IAO:0000028 "Ccnd3" xsd:string -property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:23109711"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:21539824"} +property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:23109711"} property_value: RO:0002162 NCBITaxon:10090 property_value: RO:0002264 GO:0042098 {evidence="IMP", xref="PMID:14706337"} @@ -113168,8 +113168,8 @@ property_value: RO:0002325 GO:0042584 {evidence="IDA", xref="PMID:9268363"} id: https://identifiers.org/uniprot:P30658 name: Chromobox protein homolog 2 is_a: PR:000000001 -property_value: BFO:0000050 GO:0031519 {evidence="IDA", xref="PMID:17001316"} property_value: BFO:0000050 GO:0031519 {evidence="IDA", xref="PMID:9312051"} +property_value: BFO:0000050 GO:0031519 {evidence="IDA", xref="PMID:17001316"} property_value: IAO:0000028 "Cbx2" xsd:string property_value: RO:0001025 GO:0000791 {evidence="IDA", xref="PMID:18311137"} property_value: RO:0001025 GO:0000792 {evidence="IDA", xref="PMID:18311137"} @@ -113242,8 +113242,8 @@ id: https://identifiers.org/uniprot:P30740 name: Leukocyte elastase inhibitor is_a: PR:000000001 property_value: IAO:0000028 "SERPINB1" xsd:string -property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:28344315"} property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:27559042"} +property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:28344315"} property_value: RO:0002162 NCBITaxon:9606 property_value: RO:0002331 GO:0044342 {evidence="IDA", xref="PMID:26701651"} @@ -113376,8 +113376,8 @@ property_value: IAO:0000028 "Des" xsd:string property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:26787680"} property_value: RO:0001025 GO:0005635 {evidence="IDA", xref="PMID:35959657"} property_value: RO:0001025 GO:0030018 {evidence="IDA", xref="PMID:11694502"} -property_value: RO:0001025 GO:0030018 {evidence="IDA", xref="PMID:32878913"} property_value: RO:0001025 GO:0030018 {evidence="IDA", xref="PMID:10532952"} +property_value: RO:0001025 GO:0030018 {evidence="IDA", xref="PMID:32878913"} property_value: RO:0001025 GO:0030018 {evidence="IDA", xref="PMID:26787680"} property_value: RO:0001025 GO:0030018 {evidence="IDA", xref="PMID:15138196"} property_value: RO:0001025 GO:0030018 {evidence="IDA", xref="PMID:14627610"} @@ -113416,8 +113416,8 @@ property_value: RO:0002263 GO:0042098 {evidence="IMP", xref="PMID:7688139"} property_value: RO:0002263 GO:0042098 {evidence="IDA", xref="PMID:15240667"} property_value: RO:0002263 GO:0042098 {evidence="IDA", xref="PMID:12925852"} property_value: RO:0002264 GO:0002863 {evidence="IMP", xref="PMID:10791997"} -property_value: RO:0002264 GO:0031295 {evidence="IDA", xref="PMID:15240667"} property_value: RO:0002264 GO:0031295 {evidence="IDA", xref="PMID:8125140"} +property_value: RO:0002264 GO:0031295 {evidence="IDA", xref="PMID:15240667"} property_value: RO:0002264 GO:0031295 {evidence="IGI", xref="PMID:23793062"} property_value: RO:0002264 GO:0031295 {evidence="IDA", xref="PMID:12925852"} property_value: RO:0002264 GO:0031295 {evidence="IMP", xref="PMID:7688139"} @@ -113978,8 +113978,8 @@ id: https://identifiers.org/uniprot:P31809 name: Cell adhesion molecule CEACAM1 is_a: PR:000000001 property_value: IAO:0000028 "Ceacam1" xsd:string -property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:23123061"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:12832451"} +property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:23123061"} property_value: RO:0001025 GO:0009986 {evidence="IDA", xref="PMID:19008452"} property_value: RO:0001025 GO:0060170 {evidence="IDA", xref="PMID:22179047"} property_value: RO:0002162 NCBITaxon:10090 @@ -114449,8 +114449,8 @@ name: Rod outer segment membrane protein 1 is_a: PR:000000001 property_value: IAO:0000028 "Rom1" xsd:string property_value: RO:0001025 GO:0001750 {evidence="IDA", xref="PMID:26420485"} -property_value: RO:0001025 GO:0001750 {evidence="IDA", xref="PMID:22183407"} property_value: RO:0001025 GO:0001750 {evidence="IDA", xref="PMID:20592197"} +property_value: RO:0001025 GO:0001750 {evidence="IDA", xref="PMID:22183407"} property_value: RO:0001025 GO:0042622 {evidence="IDA", xref="PMID:18654668"} property_value: RO:0002162 NCBITaxon:10090 property_value: RO:0002264 GO:0035845 {evidence="IGI", xref="PMID:28053051"} @@ -114727,8 +114727,8 @@ property_value: RO:0002264 GO:0042110 {evidence="IGI", xref="PMID:17164250"} property_value: RO:0002327 GO:0004905 {evidence="IMP", xref="PMID:14532120"} property_value: RO:0002327 GO:0004905 {evidence="IDA", xref="PMID:23872679"} property_value: RO:0002331 GO:0060337 {evidence="IMP", xref="PMID:14532120"} -property_value: RO:0002331 GO:0060337 {evidence="IMP", xref="PMID:27129230"} property_value: RO:0002331 GO:0060337 {evidence="IDA", xref="PMID:23872679"} +property_value: RO:0002331 GO:0060337 {evidence="IMP", xref="PMID:27129230"} [Term] id: https://identifiers.org/uniprot:P33897 @@ -114971,8 +114971,8 @@ property_value: RO:0002264 GO:0001997 {evidence="IDA", xref="PMID:7761854"} property_value: RO:0002264 GO:0001997 {evidence="IMP", xref="PMID:8693001"} property_value: RO:0002264 GO:0002025 {evidence="IMP", xref="PMID:10358009"} property_value: RO:0002264 GO:0002025 {evidence="IMP", xref="PMID:11641423"} -property_value: RO:0002264 GO:0002025 {evidence="IGI", xref="PMID:10358009"} property_value: RO:0002264 GO:0002025 {evidence="IGI", xref="PMID:11641423"} +property_value: RO:0002264 GO:0002025 {evidence="IGI", xref="PMID:10358009"} property_value: RO:0002264 GO:0050873 {evidence="IGI", xref="PMID:12387862"} property_value: RO:0002327 GO:0099579 {evidence="EXP", xref="PMID:10595521"} property_value: RO:0002327 GO:0099579 {evidence="IMP", xref="PMID:10595521"} @@ -115317,8 +115317,8 @@ property_value: RO:0001025 GO:0030425 {evidence="IDA", xref="PMID:22291024"} property_value: RO:0001025 GO:0042470 {evidence="IDA", xref="PMID:21291502"} property_value: RO:0001025 GO:0043025 {evidence="IDA", xref="PMID:22291024"} property_value: RO:0001025 GO:0055037 {evidence="IDA", xref="PMID:21291502"} -property_value: RO:0001025 GO:0055037 {evidence="IDA", xref="PMID:9490718"} property_value: RO:0001025 GO:0055037 {evidence="IDA", xref="PMID:22291024"} +property_value: RO:0001025 GO:0055037 {evidence="IDA", xref="PMID:9490718"} property_value: RO:0001025 GO:0055038 {evidence="IDA", xref="PMID:9624171"} property_value: RO:0002162 NCBITaxon:10090 property_value: RO:0002331 GO:0002415 {evidence="IMP", xref="PMID:9624171"} @@ -115824,8 +115824,8 @@ property_value: RO:0001025 GO:0001527 {evidence="IDA", xref="PMID:3536967"} property_value: RO:0001025 GO:0001527 {evidence="IDA", xref="PMID:7534784"} property_value: RO:0001025 GO:0001527 {evidence="IDA", xref="PMID:1860873"} property_value: RO:0001025 GO:0001527 {evidence="IDA", xref="PMID:22355679"} -property_value: RO:0001025 GO:0001527 {evidence="IDA", xref="PMID:10424889"} property_value: RO:0001025 GO:0001527 {evidence="IDA", xref="PMID:12429738"} +property_value: RO:0001025 GO:0001527 {evidence="IDA", xref="PMID:10424889"} property_value: RO:0001025 GO:0005604 {evidence="IDA", xref="PMID:3536967"} property_value: RO:0001025 GO:0031012 {evidence="IDA", xref="PMID:3536967"} property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:27559042"} @@ -115845,8 +115845,8 @@ is_a: PR:000000001 property_value: IAO:0000028 "FBN2" xsd:string property_value: RO:0001025 GO:0001527 {evidence="IDA", xref="PMID:8120105"} property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:23658023"} -property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:28675934"} property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:28327460"} +property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:28675934"} property_value: RO:0002162 NCBITaxon:9606 [Term] @@ -117548,8 +117548,8 @@ is_a: PR:000000001 property_value: IAO:0000028 "Col18a1" xsd:string property_value: RO:0001025 GO:0005604 {evidence="IDA", xref="PMID:18757743"} property_value: RO:0001025 GO:0005604 {evidence="IDA", xref="PMID:12588956"} -property_value: RO:0001025 GO:0005604 {evidence="IDA", xref="PMID:19651211"} property_value: RO:0001025 GO:0005604 {evidence="IDA", xref="PMID:15254016"} +property_value: RO:0001025 GO:0005604 {evidence="IDA", xref="PMID:19651211"} property_value: RO:0001025 GO:0005604 {evidence="IDA", xref="PMID:7568013"} property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:22159717"} property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:28071719"} @@ -117623,8 +117623,8 @@ property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:16427635"} property_value: RO:0001025 GO:0016324 {evidence="IDA", xref="PMID:21947081"} property_value: RO:0001025 GO:0045177 {evidence="IDA", xref="PMID:23434913"} property_value: RO:0001025 GO:0045177 {evidence="IDA", xref="PMID:24191021"} -property_value: RO:0001025 GO:0045177 {evidence="IDA", xref="PMID:23863479"} property_value: RO:0001025 GO:0045177 {evidence="IDA", xref="PMID:23610556"} +property_value: RO:0001025 GO:0045177 {evidence="IDA", xref="PMID:23863479"} property_value: RO:0002162 NCBITaxon:10090 property_value: RO:0002331 GO:0036305 {evidence="IMP", xref="PMID:27015268"} property_value: RO:0002331 GO:1903672 {evidence="IMP", xref="PMID:25753039"} @@ -118884,8 +118884,8 @@ name: Pre-B-cell leukemia transcription factor 1 is_a: PR:000000001 property_value: IAO:0000028 "Pbx1" xsd:string property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:32190943"} -property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:15087118"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:11010815"} +property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:15087118"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:15581866"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:11566859"} property_value: RO:0001025 GO:0005634 {evidence="IDA", xref="PMID:12724421"} @@ -119462,8 +119462,8 @@ property_value: RO:0002264 GO:0030072 {evidence="IMP", xref="PMID:12223581"} property_value: RO:0002264 GO:0030073 {evidence="IMP", xref="PMID:10078572"} property_value: RO:0002264 GO:0047496 {evidence="IDA", xref="PMID:15242649"} property_value: RO:0002264 GO:0048666 {evidence="IMP", xref="PMID:16978870"} -property_value: RO:0002264 GO:0048666 {evidence="IMP", xref="PMID:7774020"} property_value: RO:0002264 GO:0048666 {evidence="IMP", xref="PMID:10082833"} +property_value: RO:0002264 GO:0048666 {evidence="IMP", xref="PMID:7774020"} [Term] id: https://identifiers.org/uniprot:P42866 @@ -121257,8 +121257,8 @@ property_value: RO:0001025 GO:0030425 {evidence="IDA", xref="PMID:19723286"} property_value: RO:0002162 NCBITaxon:10090 property_value: RO:0002264 GO:0007340 {evidence="IMP", xref="PMID:11076688"} property_value: RO:0002264 GO:0007601 {evidence="IMP", xref="PMID:1338094"} -property_value: RO:0002327 GO:0016934 {evidence="IMP", xref="PMID:16672662"} property_value: RO:0002327 GO:0016934 {evidence="IMP", xref="PMID:12809985"} +property_value: RO:0002327 GO:0016934 {evidence="IMP", xref="PMID:16672662"} property_value: RO:0002327 GO:1904315 {evidence="IMP", xref="PMID:16672662"} property_value: RO:0002327 GO:1904315 {evidence="IDA", xref="PMID:16672662"} @@ -121384,8 +121384,8 @@ property_value: RO:0002263 GO:0001779 {evidence="IMP", xref="PMID:14607906"} property_value: RO:0002263 GO:0001787 {evidence="IDA", xref="PMID:14607906"} property_value: RO:0002264 GO:0001866 {evidence="IMP", xref="PMID:10704459"} property_value: RO:0002264 GO:0032819 {evidence="IDA", xref="PMID:14607906"} -property_value: RO:0002264 GO:0032825 {evidence="IGI", xref="PMID:17318811"} property_value: RO:0002264 GO:0032825 {evidence="IMP", xref="PMID:14607906"} +property_value: RO:0002264 GO:0032825 {evidence="IGI", xref="PMID:17318811"} property_value: RO:0002264 GO:0032825 {evidence="IDA", xref="PMID:14607906"} property_value: RO:0002264 GO:0045062 {evidence="IMP", xref="PMID:10704459"} property_value: RO:0002264 GO:0045580 {evidence="IMP", xref="PMID:10704459"} @@ -121996,8 +121996,8 @@ property_value: BFO:0000050 GO:0043529 {evidence="IPI", xref="PMID:32910895"} property_value: BFO:0000050 GO:0043529 {evidence="IDA", xref="PMID:32910895"} property_value: BFO:0000050 GO:0043529 {evidence="IPI", xref="PMID:23041287"} property_value: IAO:0000028 "CAMLG" xsd:string -property_value: RO:0001025 GO:0005783 {evidence="IDA", xref="PMID:12919676"} property_value: RO:0001025 GO:0005783 {evidence="IDA", xref="PMID:23041287"} +property_value: RO:0001025 GO:0005783 {evidence="IDA", xref="PMID:12919676"} property_value: RO:0001025 GO:0005789 {evidence="IDA", xref="PMID:31417168"} property_value: RO:0002162 NCBITaxon:9606 @@ -122922,8 +122922,8 @@ id: https://identifiers.org/uniprot:P50289 name: Acrosomal protein SP-10 is_a: PR:000000001 property_value: IAO:0000028 "Acrv1" xsd:string -property_value: RO:0001025 GO:0001669 {evidence="IDA", xref="PMID:16093322"} property_value: RO:0001025 GO:0001669 {evidence="IDA", xref="PMID:1591350"} +property_value: RO:0001025 GO:0001669 {evidence="IDA", xref="PMID:16093322"} property_value: RO:0002162 NCBITaxon:10090 [Term] @@ -123212,8 +123212,8 @@ name: Tubby protein is_a: PR:000000001 property_value: IAO:0000028 "Tub" xsd:string property_value: RO:0002162 NCBITaxon:10090 -property_value: RO:0002264 GO:0006910 {evidence="IMP", xref="PMID:19837063"} property_value: RO:0002264 GO:0006910 {evidence="IDA", xref="PMID:20978472"} +property_value: RO:0002264 GO:0006910 {evidence="IMP", xref="PMID:19837063"} [Term] id: https://identifiers.org/uniprot:P50607 @@ -123457,8 +123457,8 @@ property_value: RO:0001025 GO:0005768 {evidence="IDA", xref="PMID:26582200"} property_value: RO:0001025 GO:0005770 {evidence="IDA", xref="PMID:24035762"} property_value: RO:0001025 GO:0005770 {evidence="IDA", xref="PMID:24334765"} property_value: RO:0001025 GO:0005770 {evidence="IDA", xref="PMID:11172003"} -property_value: RO:0001025 GO:0005770 {evidence="IDA", xref="PMID:25592972"} property_value: RO:0001025 GO:0005770 {evidence="IDA", xref="PMID:15588329"} +property_value: RO:0001025 GO:0005770 {evidence="IDA", xref="PMID:25592972"} property_value: RO:0001025 GO:0005770 {evidence="IDA", xref="PMID:27390154"} property_value: RO:0001025 GO:0005770 {evidence="IDA", xref="PMID:24760869"} property_value: RO:0001025 GO:0005770 {evidence="IDA", xref="PMID:35353806"} @@ -123821,8 +123821,8 @@ property_value: RO:0001025 GO:0042383 {evidence="IDA", xref="PMID:11115849"} property_value: RO:0001025 GO:0042383 {evidence="IDA", xref="PMID:24066022"} property_value: RO:0001025 GO:0042383 {evidence="IDA", xref="PMID:21084288"} property_value: RO:0001025 GO:0042383 {evidence="IDA", xref="PMID:16319126"} -property_value: RO:0001025 GO:0042383 {evidence="IDA", xref="PMID:9008709"} property_value: RO:0001025 GO:0042383 {evidence="IDA", xref="PMID:12138167"} +property_value: RO:0001025 GO:0042383 {evidence="IDA", xref="PMID:9008709"} property_value: RO:0002162 NCBITaxon:10090 property_value: RO:0002263 GO:0014902 {evidence="IMP", xref="PMID:14517320"} property_value: RO:0002263 GO:0051649 {evidence="IMP", xref="PMID:21084288"} @@ -124547,8 +124547,8 @@ property_value: RO:0002162 NCBITaxon:10090 id: https://identifiers.org/uniprot:P52434 name: DNA-directed RNA polymerases I, II, and III subunit RPABC3 is_a: PR:000000001 -property_value: BFO:0000050 GO:0005736 {evidence="IDA", xref="PMID:36271492"} property_value: BFO:0000050 GO:0005736 {evidence="IDA", xref="PMID:34671025"} +property_value: BFO:0000050 GO:0005736 {evidence="IDA", xref="PMID:36271492"} property_value: IAO:0000028 "POLR2H" xsd:string property_value: RO:0002162 NCBITaxon:9606 @@ -124773,8 +124773,8 @@ property_value: RO:0002162 NCBITaxon:10090 property_value: RO:0002264 GO:0002002 {evidence="IMP", xref="PMID:15173164"} property_value: RO:0002264 GO:0002448 {evidence="IMP", xref="PMID:10466726"} property_value: RO:0002264 GO:0002448 {evidence="IMP", xref="PMID:10466727"} -property_value: RO:0002432 GO:0005794 {evidence="IDA", xref="PMID:8294485"} property_value: RO:0002432 GO:0005794 {evidence="IDA", xref="PMID:10639137"} +property_value: RO:0002432 GO:0005794 {evidence="IDA", xref="PMID:8294485"} property_value: RO:0002432 GO:0005794 {evidence="IDA", xref="PMID:24326668"} [Term] @@ -125207,8 +125207,8 @@ property_value: RO:0002331 GO:0006606 {evidence="IDA", xref="PMID:10781616"} id: https://identifiers.org/uniprot:P53803 name: DNA-directed RNA polymerases I, II, and III subunit RPABC4 is_a: PR:000000001 -property_value: BFO:0000050 GO:0005736 {evidence="IDA", xref="PMID:34671025"} property_value: BFO:0000050 GO:0005736 {evidence="IDA", xref="PMID:36271492"} +property_value: BFO:0000050 GO:0005736 {evidence="IDA", xref="PMID:34671025"} property_value: IAO:0000028 "POLR2K" xsd:string property_value: RO:0002162 NCBITaxon:9606 @@ -125255,8 +125255,8 @@ id: https://identifiers.org/uniprot:P53990 name: IST1 homolog is_a: PR:000000001 property_value: IAO:0000028 "IST1" xsd:string -property_value: RO:0001025 GO:0030496 {evidence="IDA", xref="PMID:20719964"} property_value: RO:0001025 GO:0030496 {evidence="IDA", xref="PMID:19129479"} +property_value: RO:0001025 GO:0030496 {evidence="IDA", xref="PMID:20719964"} property_value: RO:0001025 GO:0090543 {evidence="IDA", xref="PMID:19129479"} property_value: RO:0002162 NCBITaxon:9606 property_value: RO:0002331 GO:0061640 {evidence="IMP", xref="PMID:19525971"} @@ -126759,8 +126759,8 @@ property_value: RO:0001025 GO:0005929 {evidence="IDA", xref="PMID:18488998"} property_value: RO:0001025 GO:0005929 {evidence="IDA", xref="PMID:22689656"} property_value: RO:0001025 GO:0005929 {evidence="IDA", xref="PMID:33886552"} property_value: RO:0001025 GO:0005929 {evidence="IDA", xref="PMID:19684112"} -property_value: RO:0001025 GO:0005929 {evidence="IDA", xref="PMID:25644602"} property_value: RO:0001025 GO:0005929 {evidence="IDA", xref="PMID:19654211"} +property_value: RO:0001025 GO:0005929 {evidence="IDA", xref="PMID:25644602"} property_value: RO:0001025 GO:0005929 {evidence="IDA", xref="PMID:35353806"} property_value: RO:0001025 GO:0005929 {evidence="IDA", xref="PMID:29487109"} property_value: RO:0001025 GO:0005929 {evidence="IDA", xref="PMID:21209331"} @@ -127183,8 +127183,8 @@ id: https://identifiers.org/uniprot:P57780 name: Alpha-actinin-4 is_a: PR:000000001 property_value: IAO:0000028 "Actn4" xsd:string -property_value: RO:0001025 GO:0030018 {evidence="IDA", xref="PMID:20368620"} property_value: RO:0001025 GO:0030018 {evidence="IDA", xref="PMID:20215401"} +property_value: RO:0001025 GO:0030018 {evidence="IDA", xref="PMID:20368620"} property_value: RO:0001025 GO:0031143 {evidence="IDA", xref="PMID:15633123"} property_value: RO:0002162 NCBITaxon:10090 property_value: RO:0002331 GO:0090521 {evidence="IMP", xref="PMID:16837921"} @@ -128476,8 +128476,8 @@ property_value: RO:0001025 GO:0005769 {evidence="IDA", xref="PMID:21540189"} property_value: RO:0001025 GO:0005770 {evidence="IDA", xref="PMID:21540189"} property_value: RO:0001025 GO:0009986 {evidence="IDA", xref="PMID:23620790"} property_value: RO:0001025 GO:0009986 {evidence="IDA", xref="PMID:19106094"} -property_value: RO:0001025 GO:0009986 {evidence="IDA", xref="PMID:19665027"} property_value: RO:0001025 GO:0009986 {evidence="IDA", xref="PMID:10521508"} +property_value: RO:0001025 GO:0009986 {evidence="IDA", xref="PMID:19665027"} property_value: RO:0001025 GO:0009986 {evidence="IDA", xref="PMID:10644702"} property_value: RO:0001025 GO:0009986 {evidence="IDA", xref="PMID:18308860"} property_value: RO:0001025 GO:0031252 {evidence="IDA", xref="PMID:12421915"} @@ -129366,8 +129366,8 @@ property_value: BFO:0000050 GO:0022627 {evidence="IDA", xref="PMID:25957688"} property_value: IAO:0000028 "RPS23" xsd:string property_value: RO:0001025 GO:0005783 {evidence="IDA", xref="GO_REF:0000052"} property_value: RO:0002162 NCBITaxon:9606 -property_value: RO:0002327 GO:0003735 {evidence="IMP", xref="PMID:28257692"} property_value: RO:0002327 GO:0003735 {evidence="IDA", xref="PMID:23636399"} +property_value: RO:0002327 GO:0003735 {evidence="IMP", xref="PMID:28257692"} property_value: RO:0002327 GO:0003735 {evidence="HDA", xref="PMID:15883184"} [Term] @@ -129627,8 +129627,8 @@ id: https://identifiers.org/uniprot:P62492 name: Ras-related protein Rab-11A is_a: PR:000000001 property_value: IAO:0000028 "Rab11a" xsd:string -property_value: RO:0001025 GO:0055037 {evidence="IDA", xref="PMID:24035762"} property_value: RO:0001025 GO:0055037 {evidence="IDA", xref="PMID:19061864"} +property_value: RO:0001025 GO:0055037 {evidence="IDA", xref="PMID:24035762"} property_value: RO:0001025 GO:0055037 {evidence="IDA", xref="PMID:21291502"} property_value: RO:0002162 NCBITaxon:10090 property_value: RO:0002331 GO:0032402 {evidence="IMP", xref="PMID:21291502"} @@ -130196,8 +130196,8 @@ id: https://identifiers.org/uniprot:P62888 name: Large ribosomal subunit protein eL30 is_a: PR:000000001 property_value: BFO:0000050 GO:0022625 {evidence="HDA", xref="PMID:12962325"} -property_value: BFO:0000050 GO:0022625 {evidence="IDA", xref="PMID:25957688"} property_value: BFO:0000050 GO:0022625 {evidence="IDA", xref="PMID:32669547"} +property_value: BFO:0000050 GO:0022625 {evidence="IDA", xref="PMID:25957688"} property_value: BFO:0000050 GO:0022625 {evidence="IPI", xref="PMID:25901680"} property_value: BFO:0000050 GO:0022626 {evidence="IDA", xref="PMID:23636399"} property_value: IAO:0000028 "RPL30" xsd:string @@ -130262,8 +130262,8 @@ name: Large ribosomal subunit protein eL31 is_a: PR:000000001 property_value: BFO:0000050 GO:0022625 {evidence="HDA", xref="PMID:12962325"} property_value: BFO:0000050 GO:0022625 {evidence="IPI", xref="PMID:25901680"} -property_value: BFO:0000050 GO:0022625 {evidence="IDA", xref="PMID:32669547"} property_value: BFO:0000050 GO:0022625 {evidence="IDA", xref="PMID:25957688"} +property_value: BFO:0000050 GO:0022625 {evidence="IDA", xref="PMID:32669547"} property_value: BFO:0000050 GO:0022626 {evidence="IDA", xref="PMID:23636399"} property_value: IAO:0000028 "RPL31" xsd:string property_value: RO:0002162 NCBITaxon:9606 @@ -130309,8 +130309,8 @@ name: Large ribosomal subunit protein eL32 is_a: PR:000000001 property_value: BFO:0000050 GO:0022625 {evidence="HDA", xref="PMID:12962325"} property_value: BFO:0000050 GO:0022625 {evidence="IPI", xref="PMID:25901680"} -property_value: BFO:0000050 GO:0022625 {evidence="IDA", xref="PMID:25957688"} property_value: BFO:0000050 GO:0022625 {evidence="IDA", xref="PMID:32669547"} +property_value: BFO:0000050 GO:0022625 {evidence="IDA", xref="PMID:25957688"} property_value: BFO:0000050 GO:0022626 {evidence="IDA", xref="PMID:23636399"} property_value: IAO:0000028 "RPL32" xsd:string property_value: RO:0002162 NCBITaxon:9606 @@ -130334,12 +130334,12 @@ name: Large ribosomal subunit protein uL5 is_a: PR:000000001 property_value: BFO:0000050 GO:0022625 {evidence="HDA", xref="PMID:12962325"} property_value: BFO:0000050 GO:0022625 {evidence="IPI", xref="PMID:25901680"} -property_value: BFO:0000050 GO:0022625 {evidence="IDA", xref="PMID:25957688"} property_value: BFO:0000050 GO:0022625 {evidence="IDA", xref="PMID:32669547"} +property_value: BFO:0000050 GO:0022625 {evidence="IDA", xref="PMID:25957688"} property_value: BFO:0000050 GO:0022626 {evidence="IDA", xref="PMID:23636399"} property_value: IAO:0000028 "RPL11" xsd:string -property_value: RO:0001025 GO:0005730 {evidence="HDA", xref="PMID:16791210"} property_value: RO:0001025 GO:0005730 {evidence="IDA", xref="PMID:15195100"} +property_value: RO:0001025 GO:0005730 {evidence="HDA", xref="PMID:16791210"} property_value: RO:0001025 GO:0005730 {evidence="IDA", xref="PMID:23776465"} property_value: RO:0002162 NCBITaxon:9606 property_value: RO:0002327 GO:0003735 {evidence="IDA", xref="PMID:32669547"} @@ -131420,8 +131420,8 @@ property_value: IAO:0000028 "ACTC1" xsd:string property_value: RO:0001025 GO:0030017 {evidence="IDA", xref="PMID:16288873"} property_value: RO:0002162 NCBITaxon:9606 property_value: RO:0002331 GO:0033275 {evidence="IMP", xref="PMID:19799913"} -property_value: RO:0002331 GO:0060047 {evidence="IMP", xref="PMID:17947298"} property_value: RO:0002331 GO:0060047 {evidence="IMP", xref="PMID:9563954"} +property_value: RO:0002331 GO:0060047 {evidence="IMP", xref="PMID:17947298"} property_value: RO:0002331 GO:0060047 {evidence="IMP", xref="PMID:17611253"} [Term] @@ -131544,11 +131544,11 @@ is_a: PR:000000001 property_value: IAO:0000028 "Tubb4b" xsd:string property_value: RO:0001025 GO:0043209 {evidence="HDA", xref="PMID:17634366"} property_value: RO:0002162 NCBITaxon:10090 -property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37989994"} property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37865089"} +property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37989994"} property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37295417"} -property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37865089"} property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37989994"} +property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37865089"} property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37295417"} [Term] @@ -132485,15 +132485,15 @@ property_value: RO:0002264 GO:0070269 {evidence="IMP", xref="PMID:22002608"} property_value: RO:0002331 GO:0042742 {evidence="IDA", xref="PMID:38632402"} property_value: RO:0002331 GO:0042742 {evidence="IMP", xref="PMID:23348507"} property_value: RO:0002331 GO:0042742 {evidence="IDA", xref="PMID:25119034"} -property_value: RO:0002331 GO:0050729 {evidence="IDA", xref="PMID:34671164"} property_value: RO:0002331 GO:0050729 {evidence="IMP", xref="PMID:23348507"} +property_value: RO:0002331 GO:0050729 {evidence="IDA", xref="PMID:34671164"} property_value: RO:0002331 GO:0050729 {evidence="IDA", xref="PMID:30392956"} property_value: RO:0002331 GO:0050830 {evidence="IDA", xref="PMID:30392956"} property_value: RO:0002331 GO:0070269 {evidence="IMP", xref="PMID:23348507"} property_value: RO:0002331 GO:0070269 {evidence="IDA", xref="PMID:34671164"} property_value: RO:0002331 GO:0070269 {evidence="IDA", xref="PMID:30135078"} -property_value: RO:0002331 GO:0070269 {evidence="IDA", xref="PMID:30589883"} property_value: RO:0002331 GO:0070269 {evidence="IDA", xref="PMID:32109412"} +property_value: RO:0002331 GO:0070269 {evidence="IDA", xref="PMID:30589883"} property_value: RO:0002331 GO:0141201 {evidence="IDA", xref="PMID:38632402"} property_value: RO:0002331 GO:1900227 {evidence="IDA", xref="PMID:26173909"} @@ -133276,8 +133276,8 @@ is_a: PR:000000001 property_value: IAO:0000028 "CX3CL1" xsd:string property_value: RO:0001025 GO:0009986 {evidence="IDA", xref="PMID:12714508"} property_value: RO:0002162 NCBITaxon:9606 -property_value: RO:0002327 GO:0008009 {evidence="IDA", xref="PMID:21829356"} property_value: RO:0002327 GO:0008009 {evidence="IGI", xref="PMID:10415068"} +property_value: RO:0002327 GO:0008009 {evidence="IDA", xref="PMID:21829356"} property_value: RO:0002331 GO:0002523 {evidence="IMP", xref="PMID:23125415"} property_value: RO:0002331 GO:0050729 {evidence="IEP", xref="PMID:11777952"} property_value: RO:0002331 GO:0060326 {evidence="IDA", xref="PMID:10415068"} @@ -133721,8 +133721,8 @@ name: Alpha-sarcoglycan is_a: PR:000000001 property_value: IAO:0000028 "Sgca" xsd:string property_value: RO:0001025 GO:0042383 {evidence="IDA", xref="PMID:10481911"} -property_value: RO:0001025 GO:0042383 {evidence="IDA", xref="PMID:10678176"} property_value: RO:0001025 GO:0042383 {evidence="IDA", xref="PMID:11115849"} +property_value: RO:0001025 GO:0042383 {evidence="IDA", xref="PMID:10678176"} property_value: RO:0001025 GO:0042383 {evidence="IDA", xref="PMID:19531352"} property_value: RO:0001025 GO:0042383 {evidence="IDA", xref="PMID:11259414"} property_value: RO:0002162 NCBITaxon:10090 @@ -133828,8 +133828,8 @@ is_a: PR:000000001 property_value: BFO:0000050 GO:0017119 {evidence="IDA", xref="PMID:15047703"} property_value: IAO:0000028 "COG7" xsd:string property_value: RO:0001025 GO:0005730 {evidence="IDA", xref="GO_REF:0000052"} -property_value: RO:0001025 GO:0005794 {evidence="IDA", xref="PMID:11980916"} property_value: RO:0001025 GO:0005794 {evidence="IDA", xref="GO_REF:0000052"} +property_value: RO:0001025 GO:0005794 {evidence="IDA", xref="PMID:11980916"} property_value: RO:0002162 NCBITaxon:9606 property_value: RO:0002331 GO:0006886 {evidence="IMP", xref="PMID:15107842"} @@ -133900,8 +133900,8 @@ property_value: RO:0002331 GO:0048863 {evidence="IEP", xref="PMID:27749823"} id: https://identifiers.org/uniprot:P83881 name: Large ribosomal subunit protein eL42 is_a: PR:000000001 -property_value: BFO:0000050 GO:0022625 {evidence="IDA", xref="PMID:25957688"} property_value: BFO:0000050 GO:0022625 {evidence="IDA", xref="PMID:32669547"} +property_value: BFO:0000050 GO:0022625 {evidence="IDA", xref="PMID:25957688"} property_value: BFO:0000050 GO:0022625 {evidence="HDA", xref="PMID:12962325"} property_value: BFO:0000050 GO:0022626 {evidence="IDA", xref="PMID:23636399"} property_value: IAO:0000028 "RPL36A" xsd:string @@ -134022,8 +134022,8 @@ id: https://identifiers.org/uniprot:P84098 name: Large ribosomal subunit protein eL19 is_a: PR:000000001 property_value: BFO:0000050 GO:0022625 {evidence="HDA", xref="PMID:12962325"} -property_value: BFO:0000050 GO:0022625 {evidence="IDA", xref="PMID:32669547"} property_value: BFO:0000050 GO:0022625 {evidence="IDA", xref="PMID:25957688"} +property_value: BFO:0000050 GO:0022625 {evidence="IDA", xref="PMID:32669547"} property_value: BFO:0000050 GO:0022625 {evidence="IPI", xref="PMID:25901680"} property_value: BFO:0000050 GO:0022626 {evidence="IDA", xref="PMID:23636399"} property_value: IAO:0000028 "RPL19" xsd:string @@ -134036,8 +134036,8 @@ property_value: RO:0002327 GO:0003735 {evidence="IDA", xref="PMID:23636399"} id: https://identifiers.org/uniprot:P84099 name: Large ribosomal subunit protein eL19 is_a: PR:000000001 -property_value: BFO:0000050 GO:0022625 {evidence="IPI", xref="PMID:36517592"} property_value: BFO:0000050 GO:0022625 {evidence="IDA", xref="PMID:23500592"} +property_value: BFO:0000050 GO:0022625 {evidence="IPI", xref="PMID:36517592"} property_value: BFO:0000050 GO:0022625 {evidence="IDA", xref="PMID:36517592"} property_value: BFO:0000050 GO:0022625 {evidence="IDA", xref="PMID:6993285"} property_value: IAO:0000028 "Rpl19" xsd:string @@ -134780,8 +134780,8 @@ property_value: RO:0002162 NCBITaxon:10090 property_value: RO:0002263 GO:0050673 {evidence="IMP", xref="PMID:11002344"} property_value: RO:0002263 GO:0060767 {evidence="IMP", xref="PMID:11002344"} property_value: RO:0002263 GO:0060767 {evidence="IMP", xref="PMID:11839815"} -property_value: RO:0002264 GO:0060442 {evidence="IMP", xref="PMID:11002344"} property_value: RO:0002264 GO:0060442 {evidence="IMP", xref="PMID:10215624"} +property_value: RO:0002264 GO:0060442 {evidence="IMP", xref="PMID:11002344"} property_value: RO:0002264 GO:0060442 {evidence="IMP", xref="PMID:10906459"} property_value: RO:0002264 GO:0060664 {evidence="IMP", xref="PMID:10906459"} property_value: RO:0002331 GO:0008584 {evidence="IEP", xref="PMID:9142502"} @@ -135594,8 +135594,8 @@ property_value: IAO:0000028 "Lama4" xsd:string property_value: RO:0001025 GO:0005604 {evidence="IDA", xref="PMID:9396756"} property_value: RO:0001025 GO:0005604 {evidence="IDA", xref="PMID:9346933"} property_value: RO:0001025 GO:0005604 {evidence="IDA", xref="PMID:9614228"} -property_value: RO:0001025 GO:0005604 {evidence="IDA", xref="PMID:18757743"} property_value: RO:0001025 GO:0005604 {evidence="IDA", xref="PMID:15895400"} +property_value: RO:0001025 GO:0005604 {evidence="IDA", xref="PMID:18757743"} property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:28071719"} property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:22159717"} property_value: RO:0002162 NCBITaxon:10090 @@ -135758,8 +135758,8 @@ id: https://identifiers.org/uniprot:P98160 name: Basement membrane-specific heparan sulfate proteoglycan core protein is_a: PR:000000001 property_value: IAO:0000028 "HSPG2" xsd:string -property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:28675934"} property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:28327460"} +property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:28675934"} property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:23658023"} property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:27559042"} property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:25037231"} @@ -135969,8 +135969,8 @@ property_value: RO:0002162 NCBITaxon:10090 property_value: RO:0002263 GO:0008283 {evidence="IMP", xref="PMID:16556738"} property_value: RO:0002264 GO:0001708 {evidence="IDA", xref="PMID:10367888"} property_value: RO:0002264 GO:0030183 {evidence="IMP", xref="PMID:9300691"} -property_value: RO:0002264 GO:0060126 {evidence="IMP", xref="PMID:1334535"} property_value: RO:0002264 GO:0060126 {evidence="IMP", xref="PMID:6194978"} +property_value: RO:0002264 GO:0060126 {evidence="IMP", xref="PMID:1334535"} property_value: RO:0002264 GO:0060133 {evidence="IMP", xref="PMID:17015435"} [Term] @@ -136420,8 +136420,8 @@ id: https://identifiers.org/uniprot:Q01102 name: P-selectin is_a: PR:000000001 property_value: IAO:0000028 "Selp" xsd:string -property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:19349303"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:23583643"} +property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:19349303"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:17114491"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:8562500"} property_value: RO:0002162 NCBITaxon:10090 @@ -136809,8 +136809,8 @@ property_value: RO:0002264 GO:0019229 {evidence="IMP", xref="PMID:14609949"} property_value: RO:0002264 GO:0030073 {evidence="IMP", xref="PMID:12881419"} property_value: RO:0002264 GO:0030252 {evidence="IDA", xref="PMID:1385406"} property_value: RO:0002264 GO:0051649 {evidence="IDA", xref="PMID:32109384"} -property_value: RO:0002264 GO:0051649 {evidence="IMP", xref="PMID:12881419"} property_value: RO:0002264 GO:0051649 {evidence="IMP", xref="PMID:15132976"} +property_value: RO:0002264 GO:0051649 {evidence="IMP", xref="PMID:12881419"} property_value: RO:0002327 GO:0086007 {evidence="IDA", xref="PMID:32109384"} [Term] @@ -137109,8 +137109,8 @@ name: Kinesin-like protein KIF23 is_a: PR:000000001 property_value: IAO:0000028 "KIF23" xsd:string property_value: RO:0001025 GO:0030496 {evidence="IDA", xref="PMID:15843429"} -property_value: RO:0001025 GO:0030496 {evidence="IDA", xref="PMID:11782313"} property_value: RO:0001025 GO:0030496 {evidence="IDA", xref="PMID:15197175"} +property_value: RO:0001025 GO:0030496 {evidence="IDA", xref="PMID:11782313"} property_value: RO:0001025 GO:0030496 {evidence="IDA", xref="PMID:20186884"} property_value: RO:0001025 GO:0090543 {evidence="IDA", xref="GO_REF:0000052"} property_value: RO:0002162 NCBITaxon:9606 @@ -137158,8 +137158,8 @@ property_value: RO:0001025 GO:0016323 {evidence="IDA", xref="PMID:9950951"} property_value: RO:0001025 GO:0016323 {evidence="IDA", xref="PMID:15226261"} property_value: RO:0001025 GO:0016323 {evidence="IDA", xref="PMID:12885771"} property_value: RO:0001025 GO:0016323 {evidence="IDA", xref="PMID:20089884"} -property_value: RO:0001025 GO:0016323 {evidence="IDA", xref="PMID:20016102"} property_value: RO:0001025 GO:0016323 {evidence="IDA", xref="PMID:14625387"} +property_value: RO:0001025 GO:0016323 {evidence="IDA", xref="PMID:20016102"} property_value: RO:0001025 GO:0016323 {evidence="IDA", xref="PMID:17671182"} property_value: RO:0001025 GO:0030018 {evidence="IDA", xref="PMID:8821035"} property_value: RO:0001025 GO:0030027 {evidence="IDA", xref="PMID:14657280"} @@ -137351,8 +137351,8 @@ property_value: RO:0002162 NCBITaxon:9606 id: https://identifiers.org/uniprot:Q02543 name: Large ribosomal subunit protein eL20 is_a: PR:000000001 -property_value: BFO:0000050 GO:0022625 {evidence="IDA", xref="PMID:25957688"} property_value: BFO:0000050 GO:0022625 {evidence="IDA", xref="PMID:32669547"} +property_value: BFO:0000050 GO:0022625 {evidence="IDA", xref="PMID:25957688"} property_value: BFO:0000050 GO:0022625 {evidence="HDA", xref="PMID:12962325"} property_value: BFO:0000050 GO:0022625 {evidence="IPI", xref="PMID:25901680"} property_value: BFO:0000050 GO:0022626 {evidence="IDA", xref="PMID:23636399"} @@ -137753,8 +137753,8 @@ id: https://identifiers.org/uniprot:Q03173 name: Protein enabled homolog is_a: PR:000000001 property_value: IAO:0000028 "Enah" xsd:string -property_value: RO:0001025 GO:0030027 {evidence="IDA", xref="PMID:12672821"} property_value: RO:0001025 GO:0030027 {evidence="IDA", xref="PMID:15148305"} +property_value: RO:0001025 GO:0030027 {evidence="IDA", xref="PMID:12672821"} property_value: RO:0001025 GO:0030175 {evidence="IDA", xref="PMID:10069337"} property_value: RO:0001025 GO:0030175 {evidence="IDA", xref="PMID:15148305"} property_value: RO:0001025 GO:0043005 {evidence="IDA", xref="PMID:10069337"} @@ -138328,8 +138328,8 @@ property_value: RO:0002264 GO:0098528 {evidence="IGI", xref="PMID:19293339"} property_value: RO:0002432 GO:0005604 {evidence="IDA", xref="PMID:31837950"} property_value: RO:0002432 GO:0016529 {evidence="IMP", xref="PMID:22024752"} property_value: RO:0002432 GO:0030016 {evidence="IMP", xref="PMID:20716577"} -property_value: RO:0002432 GO:0031012 {evidence="IDA", xref="PMID:19248115"} property_value: RO:0002432 GO:0031012 {evidence="IDA", xref="PMID:23300779"} +property_value: RO:0002432 GO:0031012 {evidence="IDA", xref="PMID:19248115"} property_value: RO:0002432 GO:0031012 {evidence="IMP", xref="PMID:20951202"} [Term] @@ -138716,8 +138716,8 @@ property_value: RO:0001025 GO:0005604 {evidence="IDA", xref="PMID:18757743"} property_value: RO:0001025 GO:0005604 {evidence="IDA", xref="PMID:15895400"} property_value: RO:0001025 GO:0005604 {evidence="IDA", xref="PMID:10352025"} property_value: RO:0001025 GO:0005604 {evidence="IDA", xref="PMID:11787818"} -property_value: RO:0001025 GO:0005604 {evidence="IDA", xref="PMID:12588956"} property_value: RO:0001025 GO:0005604 {evidence="IDA", xref="PMID:10579729"} +property_value: RO:0001025 GO:0005604 {evidence="IDA", xref="PMID:12588956"} property_value: RO:0001025 GO:0005604 {evidence="IDA", xref="PMID:15928325"} property_value: RO:0001025 GO:0005604 {evidence="IDA", xref="PMID:11802174"} property_value: RO:0001025 GO:0005604 {evidence="IDA", xref="PMID:7670489"} @@ -139210,8 +139210,8 @@ property_value: RO:0002432 GO:0031594 {evidence="IMP", xref="PMID:11435464"} id: https://identifiers.org/uniprot:Q07020 name: Large ribosomal subunit protein eL18 is_a: PR:000000001 -property_value: BFO:0000050 GO:0022625 {evidence="IDA", xref="PMID:25957688"} property_value: BFO:0000050 GO:0022625 {evidence="IDA", xref="PMID:32669547"} +property_value: BFO:0000050 GO:0022625 {evidence="IDA", xref="PMID:25957688"} property_value: BFO:0000050 GO:0022625 {evidence="HDA", xref="PMID:12962325"} property_value: BFO:0000050 GO:0022625 {evidence="IPI", xref="PMID:25901680"} property_value: BFO:0000050 GO:0022626 {evidence="IDA", xref="PMID:23636399"} @@ -139298,8 +139298,8 @@ id: https://identifiers.org/uniprot:Q07092 name: Collagen alpha-1(XVI) chain is_a: PR:000000001 property_value: IAO:0000028 "COL16A1" xsd:string -property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:28675934"} property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:28327460"} +property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:28675934"} property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:28344315"} property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:25037231"} property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:27068509"} @@ -139544,8 +139544,8 @@ property_value: RO:0002264 GO:0002352 {evidence="IGI", xref="PMID:16055554"} property_value: RO:0002264 GO:0002358 {evidence="IMP", xref="PMID:7569956"} property_value: RO:0002264 GO:0007281 {evidence="IGI", xref="PMID:10894153"} property_value: RO:0002264 GO:0007283 {evidence="IMP", xref="PMID:7569956"} -property_value: RO:0002264 GO:0007283 {evidence="IGI", xref="PMID:10894153"} property_value: RO:0002264 GO:0007283 {evidence="IMP", xref="PMID:11906913"} +property_value: RO:0002264 GO:0007283 {evidence="IGI", xref="PMID:10894153"} property_value: RO:0002264 GO:0007548 {evidence="IMP", xref="PMID:15342910"} property_value: RO:0002264 GO:0008283 {evidence="IGI", xref="PMID:10762311"} property_value: RO:0002264 GO:0008584 {evidence="IMP", xref="PMID:16270031"} @@ -139851,13 +139851,13 @@ property_value: IAO:0000028 "GOLGA2" xsd:string property_value: RO:0001025 GO:0005794 {evidence="IDA", xref="GO_REF:0000052"} property_value: RO:0001025 GO:0005794 {evidence="IDA", xref="PMID:17724343"} property_value: RO:0001025 GO:0005794 {evidence="IDA", xref="PMID:15229288"} -property_value: RO:0001025 GO:0005794 {evidence="IDA", xref="PMID:20605918"} property_value: RO:0001025 GO:0005794 {evidence="IDA", xref="PMID:22792322"} +property_value: RO:0001025 GO:0005794 {evidence="IDA", xref="PMID:20605918"} property_value: RO:0001025 GO:0005801 {evidence="IDA", xref="PMID:24648492"} property_value: RO:0001025 GO:0005801 {evidence="IDA", xref="PMID:21525244"} property_value: RO:0001025 GO:0005801 {evidence="IDA", xref="PMID:22802641"} -property_value: RO:0001025 GO:0005801 {evidence="IDA", xref="PMID:18166528"} property_value: RO:0001025 GO:0005801 {evidence="IDA", xref="PMID:23814182"} +property_value: RO:0001025 GO:0005801 {evidence="IDA", xref="PMID:18166528"} property_value: RO:0002162 NCBITaxon:9606 property_value: RO:0002331 GO:0007098 {evidence="IDA", xref="PMID:19109421"} property_value: RO:0002331 GO:0007098 {evidence="IMP", xref="PMID:18045989"} @@ -140032,8 +140032,8 @@ property_value: RO:0002263 GO:0008283 {evidence="IGI", xref="PMID:16476422"} property_value: RO:0002263 GO:0008283 {evidence="IMP", xref="PMID:15668330"} property_value: RO:0002263 GO:0050673 {evidence="IMP", xref="PMID:15668330"} property_value: RO:0002263 GO:0072089 {evidence="IMP", xref="PMID:15668330"} -property_value: RO:0002264 GO:0001649 {evidence="IGI", xref="PMID:16099986"} property_value: RO:0002264 GO:0001649 {evidence="IMP", xref="PMID:15389629"} +property_value: RO:0002264 GO:0001649 {evidence="IGI", xref="PMID:16099986"} property_value: RO:0002264 GO:0001649 {evidence="IGI", xref="PMID:15565649"} property_value: RO:0002264 GO:0002051 {evidence="IGI", xref="PMID:15150273"} property_value: RO:0002264 GO:0002062 {evidence="IGI", xref="PMID:16476422"} @@ -140545,8 +140545,8 @@ property_value: BFO:0000050 GO:0005930 {evidence="IDA", xref="PMID:21209331"} property_value: IAO:0000028 "Gli2" xsd:string property_value: RO:0001025 GO:0005929 {evidence="IDA", xref="PMID:19286674"} property_value: RO:0001025 GO:0005929 {evidence="IDA", xref="PMID:22689656"} -property_value: RO:0001025 GO:0005929 {evidence="IDA", xref="PMID:19654211"} property_value: RO:0001025 GO:0005929 {evidence="IDA", xref="PMID:25644602"} +property_value: RO:0001025 GO:0005929 {evidence="IDA", xref="PMID:19654211"} property_value: RO:0001025 GO:0005929 {evidence="IDA", xref="PMID:19684112"} property_value: RO:0001025 GO:0005929 {evidence="IDA", xref="PMID:16254602"} property_value: RO:0001025 GO:0005929 {evidence="IDA", xref="PMID:29487109"} @@ -142582,8 +142582,8 @@ id: https://identifiers.org/uniprot:Q13795 name: ADP-ribosylation factor-related protein 1 is_a: PR:000000001 property_value: IAO:0000028 "ARFRP1" xsd:string -property_value: RO:0001025 GO:0005794 {evidence="IDA", xref="PMID:19224922"} property_value: RO:0001025 GO:0005794 {evidence="IDA", xref="GO_REF:0000052"} +property_value: RO:0001025 GO:0005794 {evidence="IDA", xref="PMID:19224922"} property_value: RO:0001025 GO:0005802 {evidence="IDA", xref="PMID:16129887"} property_value: RO:0002162 NCBITaxon:9606 property_value: RO:0002331 GO:0042147 {evidence="IMP", xref="PMID:16129887"} @@ -142860,8 +142860,8 @@ property_value: RO:0001025 GO:0005604 {evidence="IDA", xref="PMID:22952693"} property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:27068509"} property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:23658023"} property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:27559042"} -property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:28675934"} property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:28327460"} +property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:28675934"} property_value: RO:0002162 NCBITaxon:9606 property_value: RO:0002325 GO:0062023 {evidence="HDA", xref="PMID:20551380"} @@ -143050,8 +143050,8 @@ property_value: RO:0001025 GO:0005730 {evidence="IDA", xref="PMID:15200954"} property_value: RO:0001025 GO:0005730 {evidence="IDA", xref="PMID:9618508"} property_value: RO:0001025 GO:0005730 {evidence="IDA", xref="PMID:11420665"} property_value: RO:0001025 GO:0005730 {evidence="IDA", xref="PMID:17498979"} -property_value: RO:0001025 GO:0005730 {evidence="IDA", xref="PMID:25801465"} property_value: RO:0001025 GO:0005730 {evidence="IDA", xref="PMID:12944467"} +property_value: RO:0001025 GO:0005730 {evidence="IDA", xref="PMID:25801465"} property_value: RO:0002162 NCBITaxon:9606 [Term] @@ -143259,8 +143259,8 @@ id: https://identifiers.org/uniprot:Q14442 name: Phosphatidylinositol N-acetylglucosaminyltransferase subunit H is_a: PR:000000001 property_value: BFO:0000050 GO:0000506 {evidence="IDA", xref="PMID:16162815"} -property_value: BFO:0000050 GO:0000506 {evidence="IDA", xref="PMID:10944123"} property_value: BFO:0000050 GO:0000506 {evidence="IPI", xref="PMID:16162815"} +property_value: BFO:0000050 GO:0000506 {evidence="IDA", xref="PMID:10944123"} property_value: BFO:0000050 GO:0005789 {evidence="IDA", xref="PMID:16162815"} property_value: IAO:0000028 "PIGH" xsd:string property_value: RO:0002162 NCBITaxon:9606 @@ -143318,8 +143318,8 @@ property_value: IAO:0000028 "SCN5A" xsd:string property_value: RO:0001025 GO:0005730 {evidence="IDA", xref="GO_REF:0000052"} property_value: RO:0001025 GO:0005783 {evidence="IDA", xref="PMID:22529811"} property_value: RO:0001025 GO:0009986 {evidence="IDA", xref="PMID:19943616"} -property_value: RO:0001025 GO:0009986 {evidence="IDA", xref="PMID:19666841"} property_value: RO:0001025 GO:0009986 {evidence="IDA", xref="PMID:14500339"} +property_value: RO:0001025 GO:0009986 {evidence="IDA", xref="PMID:19666841"} property_value: RO:0001025 GO:0030018 {evidence="IDA", xref="PMID:19943616"} property_value: RO:0001025 GO:0030315 {evidence="IDA", xref="PMID:15579534"} property_value: RO:0001025 GO:0042383 {evidence="IDA", xref="PMID:17060380"} @@ -143624,8 +143624,8 @@ property_value: RO:0001025 GO:0001527 {evidence="IDA", xref="PMID:12429738"} property_value: RO:0001025 GO:0031012 {evidence="IDA", xref="PMID:8617200"} property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:25037231"} property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:23979707"} -property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:28675934"} property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:28327460"} +property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:28675934"} property_value: RO:0001025 GO:0062023 {evidence="IDA", xref="PMID:16157329"} property_value: RO:0002162 NCBITaxon:9606 property_value: RO:0002325 GO:0062023 {evidence="HDA", xref="PMID:20551380"} @@ -143663,8 +143663,8 @@ name: Golgin subfamily B member 1 is_a: PR:000000001 property_value: IAO:0000028 "GOLGB1" xsd:string property_value: RO:0001025 GO:0005794 {evidence="IDA", xref="GO_REF:0000052"} -property_value: RO:0001025 GO:0005794 {evidence="IDA", xref="PMID:22792322"} property_value: RO:0001025 GO:0005794 {evidence="IDA", xref="PMID:22572157"} +property_value: RO:0001025 GO:0005794 {evidence="IDA", xref="PMID:22792322"} property_value: RO:0002162 NCBITaxon:9606 [Term] @@ -143934,8 +143934,8 @@ property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37865089"} property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37989994"} property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37295417"} property_value: RO:0002432 GO:0160111 {evidence="IDA", xref="PMID:37295417"} -property_value: RO:0002432 GO:0160111 {evidence="IDA", xref="PMID:37865089"} property_value: RO:0002432 GO:0160111 {evidence="IDA", xref="PMID:37989994"} +property_value: RO:0002432 GO:0160111 {evidence="IDA", xref="PMID:37865089"} property_value: RO:0004034 GO:0060378 {evidence="IGI", xref="PMID:18951373"} [Term] @@ -144021,13 +144021,13 @@ is_a: PR:000000001 property_value: IAO:0000028 "Kcnc2" xsd:string property_value: RO:0001025 GO:0030424 {evidence="IDA", xref="PMID:10903572"} property_value: RO:0001025 GO:0030425 {evidence="IDA", xref="PMID:10903572"} -property_value: RO:0001025 GO:0030425 {evidence="IDA", xref="PMID:12000114"} property_value: RO:0001025 GO:0030425 {evidence="IDA", xref="PMID:10531438"} +property_value: RO:0001025 GO:0030425 {evidence="IDA", xref="PMID:12000114"} property_value: RO:0001025 GO:0030425 {evidence="IDA", xref="PMID:15317859"} property_value: RO:0001025 GO:0032809 {evidence="IDA", xref="PMID:10531438"} property_value: RO:0001025 GO:0042734 {evidence="IDA", xref="PMID:10531438"} -property_value: RO:0001025 GO:0043204 {evidence="IDA", xref="PMID:12000114"} property_value: RO:0001025 GO:0043204 {evidence="IDA", xref="PMID:10531438"} +property_value: RO:0001025 GO:0043204 {evidence="IDA", xref="PMID:12000114"} property_value: RO:0001025 GO:0044297 {evidence="IDA", xref="PMID:15317859"} property_value: RO:0001025 GO:0045211 {evidence="IDA", xref="PMID:10531438"} property_value: RO:0002162 NCBITaxon:10090 @@ -144057,8 +144057,8 @@ id: https://identifiers.org/uniprot:Q14BI5 name: Myomesin 2 is_a: PR:000000001 property_value: IAO:0000028 "Myom2" xsd:string -property_value: RO:0001025 GO:0031430 {evidence="IDA", xref="PMID:20368620"} property_value: RO:0001025 GO:0031430 {evidence="IDA", xref="PMID:20215401"} +property_value: RO:0001025 GO:0031430 {evidence="IDA", xref="PMID:20368620"} property_value: RO:0002162 NCBITaxon:10090 [Term] @@ -144229,8 +144229,8 @@ id: https://identifiers.org/uniprot:Q15011 name: Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein is_a: PR:000000001 property_value: IAO:0000028 "HERPUD1" xsd:string -property_value: RO:0001025 GO:0005783 {evidence="IDA", xref="PMID:22045699"} property_value: RO:0001025 GO:0005783 {evidence="IDA", xref="PMID:19788048"} +property_value: RO:0001025 GO:0005783 {evidence="IDA", xref="PMID:22045699"} property_value: RO:0001025 GO:0005783 {evidence="IDA", xref="PMID:15102845"} property_value: RO:0001025 GO:0005789 {evidence="IDA", xref="PMID:10922362"} property_value: RO:0001025 GO:1990037 {evidence="IDA", xref="PMID:19788048"} @@ -144805,8 +144805,8 @@ property_value: IAO:0000028 "ANGPT1" xsd:string property_value: RO:0001025 GO:0005902 {evidence="IDA", xref="PMID:19424712"} property_value: RO:0002162 NCBITaxon:9606 property_value: RO:0002331 GO:0030210 {evidence="IDA", xref="PMID:19297368"} -property_value: RO:0002331 GO:0043116 {evidence="IDA", xref="PMID:19297368"} property_value: RO:0002331 GO:0043116 {evidence="IDA", xref="PMID:14978158"} +property_value: RO:0002331 GO:0043116 {evidence="IDA", xref="PMID:19297368"} property_value: RO:0002331 GO:1905605 {evidence="IMP", xref="PMID:19148554"} [Term] @@ -145020,8 +145020,8 @@ is_a: PR:000000001 property_value: IAO:0000028 "TGFBI" xsd:string property_value: RO:0001025 GO:0005802 {evidence="IDA", xref="PMID:19478074"} property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:23979707"} -property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:28327460"} property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:28675934"} +property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:28327460"} property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:25037231"} property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:27559042"} property_value: RO:0002162 NCBITaxon:9606 @@ -146517,8 +146517,8 @@ property_value: RO:0001025 GO:0000139 {evidence="IDA", xref="PMID:28569745"} property_value: RO:0001025 GO:0005789 {evidence="IDA", xref="PMID:28569745"} property_value: RO:0002162 NCBITaxon:10090 property_value: RO:0002331 GO:0007520 {evidence="IDA", xref="PMID:28569755"} -property_value: RO:0002331 GO:0007520 {evidence="IDA", xref="PMID:30197239"} property_value: RO:0002331 GO:0007520 {evidence="IDA", xref="PMID:28569745"} +property_value: RO:0002331 GO:0007520 {evidence="IDA", xref="PMID:30197239"} property_value: RO:0002331 GO:0007520 {evidence="IMP", xref="PMID:28386024"} property_value: RO:0002331 GO:0014905 {evidence="IMP", xref="PMID:29581287"} @@ -147331,8 +147331,8 @@ property_value: RO:0002162 NCBITaxon:9606 id: https://identifiers.org/uniprot:Q3SYG4 name: Protein PTHB1 is_a: PR:000000001 -property_value: BFO:0000050 GO:0034464 {evidence="IDA", xref="PMID:20080638"} property_value: BFO:0000050 GO:0034464 {evidence="IDA", xref="PMID:17574030"} +property_value: BFO:0000050 GO:0034464 {evidence="IDA", xref="PMID:20080638"} property_value: BFO:0000050 GO:0034464 {evidence="IPI", xref="PMID:19081074"} property_value: BFO:0000050 GO:0034464 {evidence="IDA", xref="PMID:24550735"} property_value: BFO:0000050 GO:0060170 {evidence="IDA", xref="PMID:19081074"} @@ -147823,8 +147823,8 @@ name: Calponin-homology (CH) domain-containing protein is_a: PR:000000001 property_value: IAO:0000028 "Utrn" xsd:string property_value: RO:0001025 GO:0031594 {evidence="IDA", xref="PMID:17119023"} -property_value: RO:0001025 GO:0031594 {evidence="IDA", xref="PMID:12808150"} property_value: RO:0001025 GO:0031594 {evidence="IDA", xref="PMID:9674605"} +property_value: RO:0001025 GO:0031594 {evidence="IDA", xref="PMID:12808150"} property_value: RO:0001025 GO:0031594 {evidence="IDA", xref="PMID:1461282"} property_value: RO:0001025 GO:0042383 {evidence="IDA", xref="PMID:12808150"} property_value: RO:0002162 NCBITaxon:10090 @@ -149903,8 +149903,8 @@ name: Calponin-homology (CH) domain-containing protein is_a: PR:000000001 property_value: IAO:0000028 "Utrn" xsd:string property_value: RO:0001025 GO:0031594 {evidence="IDA", xref="PMID:17119023"} -property_value: RO:0001025 GO:0031594 {evidence="IDA", xref="PMID:12808150"} property_value: RO:0001025 GO:0031594 {evidence="IDA", xref="PMID:9674605"} +property_value: RO:0001025 GO:0031594 {evidence="IDA", xref="PMID:12808150"} property_value: RO:0001025 GO:0031594 {evidence="IDA", xref="PMID:1461282"} property_value: RO:0001025 GO:0042383 {evidence="IDA", xref="PMID:12808150"} property_value: RO:0002162 NCBITaxon:10090 @@ -150069,8 +150069,8 @@ id: https://identifiers.org/uniprot:Q3V0Q7 name: Transmembrane protease serine 12 is_a: PR:000000001 property_value: IAO:0000028 "Tmprss12" xsd:string -property_value: RO:0001025 GO:0001669 {evidence="IDA", xref="PMID:35547804"} property_value: RO:0001025 GO:0001669 {evidence="IDA", xref="PMID:32529245"} +property_value: RO:0001025 GO:0001669 {evidence="IDA", xref="PMID:35547804"} property_value: RO:0002162 NCBITaxon:10090 property_value: RO:0002264 GO:0007339 {evidence="IMP", xref="PMID:32529245"} property_value: RO:0002331 GO:0001675 {evidence="IMP", xref="PMID:35547804"} @@ -150726,11 +150726,11 @@ is_a: PR:000000001 property_value: IAO:0000028 "Cfap107" xsd:string property_value: RO:0002162 NCBITaxon:10090 property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37295417"} -property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37865089"} property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37989994"} +property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37865089"} property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37295417"} -property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37865089"} property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37989994"} +property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37865089"} property_value: RO:0002432 GO:0160111 {evidence="IDA", xref="PMID:37865089"} property_value: RO:0002432 GO:0160111 {evidence="IDA", xref="PMID:37989994"} property_value: RO:0002432 GO:0160111 {evidence="IDA", xref="PMID:37295417"} @@ -151947,15 +151947,15 @@ name: Piercer of microtubule wall 1 protein is_a: PR:000000001 property_value: IAO:0000028 "Pierce1" xsd:string property_value: RO:0002162 NCBITaxon:10090 -property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37865089"} property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37989994"} +property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37865089"} property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37295417"} property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37295417"} property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37865089"} property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37989994"} property_value: RO:0002432 GO:0160111 {evidence="IDA", xref="PMID:37295417"} -property_value: RO:0002432 GO:0160111 {evidence="IDA", xref="PMID:37989994"} property_value: RO:0002432 GO:0160111 {evidence="IDA", xref="PMID:37865089"} +property_value: RO:0002432 GO:0160111 {evidence="IDA", xref="PMID:37989994"} [Term] id: https://identifiers.org/uniprot:Q5BN46 @@ -152270,8 +152270,8 @@ property_value: RO:0002432 GO:0036126 {evidence="IMP", xref="PMID:37236356"} property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37295417"} property_value: RO:0002432 GO:0097225 {evidence="IMP", xref="PMID:37236356"} property_value: RO:0002432 GO:0160112 {evidence="IDA", xref="PMID:37295417"} -property_value: RO:0002432 GO:0160112 {evidence="IDA", xref="PMID:37865089"} property_value: RO:0002432 GO:0160112 {evidence="IDA", xref="PMID:37989994"} +property_value: RO:0002432 GO:0160112 {evidence="IDA", xref="PMID:37865089"} [Term] id: https://identifiers.org/uniprot:Q5F289 @@ -153827,8 +153827,8 @@ property_value: IAO:0000028 "Sco1" xsd:string property_value: RO:0002162 NCBITaxon:10090 property_value: RO:0002264 GO:0002521 {evidence="IMP", xref="PMID:36301669"} property_value: RO:0002264 GO:0006878 {evidence="IMP", xref="PMID:25683716"} -property_value: RO:0002264 GO:0006878 {evidence="IMP", xref="PMID:28973536"} property_value: RO:0002264 GO:0006878 {evidence="IDA", xref="PMID:28647369"} +property_value: RO:0002264 GO:0006878 {evidence="IMP", xref="PMID:28973536"} property_value: RO:0002264 GO:0006879 {evidence="IMP", xref="PMID:36301669"} property_value: RO:0002264 GO:0006882 {evidence="IMP", xref="PMID:36301669"} property_value: RO:0002264 GO:0006955 {evidence="IMP", xref="PMID:36301669"} @@ -155130,8 +155130,8 @@ is_a: PR:000000001 property_value: IAO:0000028 "IER5" xsd:string property_value: RO:0001025 GO:0005730 {evidence="IDA", xref="GO_REF:0000052"} property_value: RO:0002162 NCBITaxon:9606 -property_value: RO:0002325 GO:0000159 {evidence="IDA", xref="PMID:25816751"} property_value: RO:0002325 GO:0000159 {evidence="IDA", xref="PMID:26496226"} +property_value: RO:0002325 GO:0000159 {evidence="IDA", xref="PMID:25816751"} [Term] id: https://identifiers.org/uniprot:Q5VY43 @@ -156261,8 +156261,8 @@ property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:28071719"} property_value: RO:0002162 NCBITaxon:10090 property_value: RO:0002264 GO:0000902 {evidence="IMP", xref="PMID:12925587"} property_value: RO:0002264 GO:0001764 {evidence="IGI", xref="PMID:11226314"} -property_value: RO:0002264 GO:0001764 {evidence="IMP", xref="PMID:12724835"} property_value: RO:0002264 GO:0001764 {evidence="IMP", xref="PMID:12223565"} +property_value: RO:0002264 GO:0001764 {evidence="IMP", xref="PMID:12724835"} property_value: RO:0002264 GO:0007411 {evidence="IMP", xref="PMID:16324103"} property_value: RO:0002264 GO:0010001 {evidence="IMP", xref="PMID:12925587"} property_value: RO:0002264 GO:0016358 {evidence="IMP", xref="PMID:14715136"} @@ -156674,8 +156674,8 @@ is_a: PR:000000001 property_value: BFO:0000050 GO:0043259 {evidence="IPI", xref="PMID:9299121"} property_value: IAO:0000028 "Lama5" xsd:string property_value: RO:0001025 GO:0005604 {evidence="IDA", xref="PMID:19651211"} -property_value: RO:0001025 GO:0005604 {evidence="IDA", xref="PMID:12051813"} property_value: RO:0001025 GO:0005604 {evidence="IDA", xref="PMID:9735344"} +property_value: RO:0001025 GO:0005604 {evidence="IDA", xref="PMID:12051813"} property_value: RO:0001025 GO:0005604 {evidence="IDA", xref="PMID:11507772"} property_value: RO:0001025 GO:0005604 {evidence="IDA", xref="PMID:9396756"} property_value: RO:0001025 GO:0005604 {evidence="IDA", xref="PMID:12743034"} @@ -156705,8 +156705,8 @@ name: Muscle, skeletal receptor tyrosine-protein kinase is_a: PR:000000001 property_value: IAO:0000028 "Musk" xsd:string property_value: RO:0001025 GO:0031594 {evidence="IDA", xref="PMID:18957220"} -property_value: RO:0001025 GO:0031594 {evidence="IDA", xref="PMID:20053883"} property_value: RO:0001025 GO:0031594 {evidence="IDA", xref="PMID:19038220"} +property_value: RO:0001025 GO:0031594 {evidence="IDA", xref="PMID:20053883"} property_value: RO:0001025 GO:0031594 {evidence="IDA", xref="PMID:17119023"} property_value: RO:0001025 GO:0045211 {evidence="IDA", xref="PMID:19038220"} property_value: RO:0002162 NCBITaxon:10090 @@ -157046,8 +157046,8 @@ is_a: PR:000000001 property_value: BFO:0000050 GO:0005610 {evidence="IDA", xref="PMID:9264260"} property_value: IAO:0000028 "Lamc2" xsd:string property_value: RO:0001025 GO:0005604 {evidence="IDA", xref="PMID:9264260"} -property_value: RO:0001025 GO:0005604 {evidence="IDA", xref="PMID:18757743"} property_value: RO:0001025 GO:0005604 {evidence="IDA", xref="PMID:15895400"} +property_value: RO:0001025 GO:0005604 {evidence="IDA", xref="PMID:18757743"} property_value: RO:0001025 GO:0005604 {evidence="IDA", xref="PMID:11733994"} property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:22159717"} property_value: RO:0002162 NCBITaxon:10090 @@ -157574,8 +157574,8 @@ property_value: RO:0002264 GO:0019226 {evidence="IMP", xref="PMID:19193890"} property_value: RO:0002264 GO:0030317 {evidence="IMP", xref="PMID:11959138"} property_value: RO:0002264 GO:0051649 {evidence="IMP", xref="PMID:11959138"} property_value: RO:0002264 GO:0051649 {evidence="IMP", xref="PMID:12074836"} -property_value: RO:0002264 GO:0051649 {evidence="IMP", xref="PMID:17369816"} property_value: RO:0002264 GO:0051649 {evidence="IMP", xref="PMID:11854466"} +property_value: RO:0002264 GO:0051649 {evidence="IMP", xref="PMID:17369816"} property_value: RO:0002264 GO:0051649 {evidence="IMP", xref="PMID:15630454"} property_value: RO:0002432 GO:0042734 {evidence="IDA", xref="PMID:23015445"} property_value: RO:0002432 GO:0045211 {evidence="IDA", xref="PMID:23015445"} @@ -157664,9 +157664,9 @@ property_value: RO:0001025 GO:0044295 {evidence="IDA", xref="PMID:18716223"} property_value: RO:0002162 NCBITaxon:10090 property_value: RO:0002263 GO:0001935 {evidence="IGI", xref="PMID:9159163"} property_value: RO:0002263 GO:0001935 {evidence="IMP", xref="PMID:9060821"} +property_value: RO:0002263 GO:0008283 {evidence="IMP", xref="PMID:18656477"} property_value: RO:0002263 GO:0008283 {evidence="IGI", xref="PMID:11381263"} property_value: RO:0002263 GO:0008283 {evidence="IGI", xref="PMID:17615359"} -property_value: RO:0002263 GO:0008283 {evidence="IMP", xref="PMID:18656477"} property_value: RO:0002263 GO:0008283 {evidence="IGI", xref="PMID:17875695"} property_value: RO:0002263 GO:0008283 {evidence="IGI", xref="PMID:11385109"} property_value: RO:0002263 GO:0008283 {evidence="IGI", xref="PMID:9506519"} @@ -157679,10 +157679,10 @@ property_value: RO:0002263 GO:0008283 {evidence="IGI", xref="PMID:10783317"} property_value: RO:0002263 GO:0008283 {evidence="IMP", xref="PMID:8945508"} property_value: RO:0002263 GO:0008283 {evidence="IMP", xref="PMID:9135000"} property_value: RO:0002263 GO:0008283 {evidence="IGI", xref="PMID:10626800"} -property_value: RO:0002263 GO:0008283 {evidence="IGI", xref="PMID:11606502"} property_value: RO:0002263 GO:0008283 {evidence="IGI", xref="PMID:16007074"} -property_value: RO:0002263 GO:0008283 {evidence="IMP", xref="PMID:15550389"} +property_value: RO:0002263 GO:0008283 {evidence="IGI", xref="PMID:11606502"} property_value: RO:0002263 GO:0008283 {evidence="IGI", xref="PMID:17299058"} +property_value: RO:0002263 GO:0008283 {evidence="IMP", xref="PMID:15550389"} property_value: RO:0002263 GO:0008283 {evidence="IGI", xref="PMID:18056981"} property_value: RO:0002263 GO:0008283 {evidence="IGI", xref="PMID:11731407"} property_value: RO:0002263 GO:0008283 {evidence="IMP", xref="PMID:15198980"} @@ -157717,8 +157717,8 @@ property_value: RO:0002263 GO:0008283 {evidence="IGI", xref="PMID:17596282"} property_value: RO:0002263 GO:0008283 {evidence="IGI", xref="PMID:15958588"} property_value: RO:0002263 GO:0008283 {evidence="IGI", xref="PMID:18719115"} property_value: RO:0002263 GO:0008283 {evidence="IMP", xref="PMID:11559569"} -property_value: RO:0002263 GO:0008283 {evidence="IGI", xref="PMID:11773073"} property_value: RO:0002263 GO:0008283 {evidence="IMP", xref="PMID:10334197"} +property_value: RO:0002263 GO:0008283 {evidence="IGI", xref="PMID:11773073"} property_value: RO:0002263 GO:0008283 {evidence="IGI", xref="PMID:11197776"} property_value: RO:0002263 GO:0008283 {evidence="IGI", xref="PMID:8978063"} property_value: RO:0002263 GO:0008283 {evidence="IGI", xref="PMID:8978062"} @@ -158598,8 +158598,8 @@ property_value: RO:0002264 GO:0042711 {evidence="IMP", xref="PMID:17360497"} property_value: RO:0002264 GO:0042711 {evidence="IMP", xref="PMID:7809078"} property_value: RO:0002327 GO:0001588 {evidence="IDA", xref="PMID:8738226"} property_value: RO:0002327 GO:0001588 {evidence="IDA", xref="PMID:12930822"} -property_value: RO:0002327 GO:0001588 {evidence="IDA", xref="PMID:16962565"} property_value: RO:0002327 GO:0001588 {evidence="IDA", xref="PMID:8294904"} +property_value: RO:0002327 GO:0001588 {evidence="IDA", xref="PMID:16962565"} property_value: RO:0002327 GO:0001588 {evidence="IMP", xref="PMID:13679419"} property_value: RO:0002327 GO:0001588 {evidence="IMP", xref="PMID:7809078"} property_value: RO:0002327 GO:0001588 {evidence="IDA", xref="PMID:7954836"} @@ -158688,8 +158688,8 @@ is_a: PR:000000001 property_value: IAO:0000028 "Utrn" xsd:string property_value: RO:0001025 GO:0031594 {evidence="IDA", xref="PMID:17119023"} property_value: RO:0001025 GO:0031594 {evidence="IDA", xref="PMID:1461282"} -property_value: RO:0001025 GO:0031594 {evidence="IDA", xref="PMID:12808150"} property_value: RO:0001025 GO:0031594 {evidence="IDA", xref="PMID:9674605"} +property_value: RO:0001025 GO:0031594 {evidence="IDA", xref="PMID:12808150"} property_value: RO:0001025 GO:0042383 {evidence="IDA", xref="PMID:12808150"} property_value: RO:0002162 NCBITaxon:10090 @@ -159269,13 +159269,13 @@ property_value: RO:0002162 NCBITaxon:10090 property_value: RO:0002331 GO:0007283 {evidence="IMP", xref="PMID:22396656"} property_value: RO:0002331 GO:0007288 {evidence="IMP", xref="PMID:22396656"} property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37295417"} -property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37989994"} property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37865089"} -property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37989994"} +property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37989994"} property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37865089"} +property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37989994"} property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37295417"} -property_value: RO:0002432 GO:0160111 {evidence="IDA", xref="PMID:37989994"} property_value: RO:0002432 GO:0160111 {evidence="IDA", xref="PMID:37865089"} +property_value: RO:0002432 GO:0160111 {evidence="IDA", xref="PMID:37989994"} property_value: RO:0002432 GO:0160111 {evidence="IDA", xref="PMID:37295417"} [Term] @@ -159320,16 +159320,16 @@ property_value: BFO:0000050 GO:0015935 {evidence="IDA", xref="PMID:18809582"} property_value: IAO:0000028 "Npm1" xsd:string property_value: RO:0001025 GO:0001652 {evidence="IDA", xref="PMID:15485902"} property_value: RO:0001025 GO:0005730 {evidence="IDA", xref="PMID:10716735"} -property_value: RO:0001025 GO:0005730 {evidence="IDA", xref="PMID:12374805"} property_value: RO:0001025 GO:0005730 {evidence="IDA", xref="PMID:15485902"} -property_value: RO:0001025 GO:0005730 {evidence="IDA", xref="PMID:16297385"} +property_value: RO:0001025 GO:0005730 {evidence="IDA", xref="PMID:12374805"} property_value: RO:0001025 GO:0005730 {evidence="IDA", xref="PMID:16855206"} +property_value: RO:0001025 GO:0005730 {evidence="IDA", xref="PMID:16297385"} property_value: RO:0001025 GO:0005730 {evidence="IDA", xref="PMID:2100262"} property_value: RO:0001025 GO:0005730 {evidence="IDA", xref="PMID:15596447"} property_value: RO:0001025 GO:0005730 {evidence="IDA", xref="PMID:15615785"} property_value: RO:0001025 GO:0005730 {evidence="IDA", xref="PMID:16648475"} -property_value: RO:0001025 GO:0005730 {evidence="IDA", xref="PMID:16027046"} property_value: RO:0001025 GO:0005730 {evidence="IDA", xref="PMID:18625840"} +property_value: RO:0001025 GO:0005730 {evidence="IDA", xref="PMID:16027046"} property_value: RO:0001025 GO:0005730 {evidence="IDA", xref="PMID:18809582"} property_value: RO:0001025 GO:0005730 {evidence="IDA", xref="PMID:18023416"} property_value: RO:0001025 GO:0005730 {evidence="IDA", xref="PMID:16129783"} @@ -159634,8 +159634,8 @@ property_value: RO:0001025 GO:0008021 {evidence="IDA", xref="PMID:16520334"} property_value: RO:0001025 GO:0014069 {evidence="IDA", xref="PMID:17018287"} property_value: RO:0001025 GO:0014069 {evidence="IDA", xref="PMID:23791195"} property_value: RO:0001025 GO:0014069 {evidence="IDA", xref="PMID:15748150"} -property_value: RO:0001025 GO:0014069 {evidence="IDA", xref="PMID:17093100"} property_value: RO:0001025 GO:0014069 {evidence="IDA", xref="PMID:17114649"} +property_value: RO:0001025 GO:0014069 {evidence="IDA", xref="PMID:17093100"} property_value: RO:0001025 GO:0014069 {evidence="IDA", xref="PMID:29490264"} property_value: RO:0001025 GO:0014069 {evidence="IDA", xref="PMID:21144999"} property_value: RO:0001025 GO:0014069 {evidence="IDA", xref="PMID:15317856"} @@ -159983,8 +159983,8 @@ property_value: RO:0002264 GO:0008283 {evidence="IMP", xref="PMID:20515681"} property_value: RO:0002264 GO:0072137 {evidence="IGI", xref="PMID:26116661"} property_value: RO:0002331 GO:0003337 {evidence="IEP", xref="PMID:10322633"} property_value: RO:0002331 GO:0007501 {evidence="IDA", xref="PMID:17785448"} -property_value: RO:0002331 GO:0072038 {evidence="IMP", xref="PMID:21350016"} property_value: RO:0002331 GO:0072038 {evidence="IDA", xref="PMID:24598167"} +property_value: RO:0002331 GO:0072038 {evidence="IMP", xref="PMID:21350016"} property_value: RO:0002331 GO:0072038 {evidence="IDA", xref="PMID:22902740"} property_value: RO:0002331 GO:0072038 {evidence="IMP", xref="PMID:18682239"} property_value: RO:0002331 GO:0072161 {evidence="IMP", xref="PMID:17036046"} @@ -160015,8 +160015,8 @@ property_value: RO:0001025 GO:0030017 {evidence="IDA", xref="PMID:16702235"} property_value: RO:0001025 GO:0031430 {evidence="IDA", xref="PMID:22562206"} property_value: RO:0001025 GO:0031430 {evidence="IDA", xref="PMID:18310078"} property_value: RO:0001025 GO:0031430 {evidence="IDA", xref="PMID:18177667"} -property_value: RO:0001025 GO:0031430 {evidence="IDA", xref="PMID:20368620"} property_value: RO:0001025 GO:0031430 {evidence="IDA", xref="PMID:20215401"} +property_value: RO:0001025 GO:0031430 {evidence="IDA", xref="PMID:20368620"} property_value: RO:0002162 NCBITaxon:10090 [Term] @@ -160975,8 +160975,8 @@ property_value: BFO:0000050 GO:0005930 {evidence="IDA", xref="PMID:21209331"} property_value: IAO:0000028 "Arl13b" xsd:string property_value: RO:0001025 GO:0005929 {evidence="IDA", xref="PMID:23351563"} property_value: RO:0001025 GO:0005929 {evidence="IDA", xref="PMID:24336288"} -property_value: RO:0001025 GO:0005929 {evidence="IDA", xref="PMID:22179047"} property_value: RO:0001025 GO:0005929 {evidence="IDA", xref="PMID:22689656"} +property_value: RO:0001025 GO:0005929 {evidence="IDA", xref="PMID:22179047"} property_value: RO:0001025 GO:0005929 {evidence="IDA", xref="PMID:23153492"} property_value: RO:0001025 GO:0005929 {evidence="IDA", xref="PMID:21209331"} property_value: RO:0001025 GO:0005929 {evidence="IDA", xref="PMID:31887266"} @@ -161657,8 +161657,8 @@ property_value: RO:0002264 GO:0006878 {evidence="IMP", xref="PMID:9484715"} property_value: RO:0002264 GO:0006878 {evidence="IMP", xref="PMID:8040371"} property_value: RO:0002264 GO:0006878 {evidence="IMP", xref="PMID:9392450"} property_value: RO:0002264 GO:0006878 {evidence="IMP", xref="PMID:8257436"} -property_value: RO:0002264 GO:0006878 {evidence="IMP", xref="PMID:11085952"} property_value: RO:0002264 GO:0006878 {evidence="IMP", xref="PMID:1588441"} +property_value: RO:0002264 GO:0006878 {evidence="IMP", xref="PMID:11085952"} property_value: RO:0002264 GO:0006878 {evidence="IMP", xref="PMID:6863890"} property_value: RO:0002264 GO:0006882 {evidence="IMP", xref="PMID:8040371"} property_value: RO:0002264 GO:0006882 {evidence="IMP", xref="PMID:8257436"} @@ -162735,8 +162735,8 @@ property_value: BFO:0000050 GO:0036038 {evidence="IDA", xref="PMID:21725307"} property_value: IAO:0000028 "Cep290" xsd:string property_value: RO:0001025 GO:0001750 {evidence="IDA", xref="PMID:23943788"} property_value: RO:0001025 GO:0032391 {evidence="IDA", xref="PMID:16682973"} -property_value: RO:0001025 GO:0032391 {evidence="IDA", xref="PMID:23943788"} property_value: RO:0001025 GO:0032391 {evidence="IDA", xref="PMID:16632484"} +property_value: RO:0001025 GO:0032391 {evidence="IDA", xref="PMID:23943788"} property_value: RO:0001025 GO:0035869 {evidence="IDA", xref="PMID:22446187"} property_value: RO:0001025 GO:0120205 {evidence="IDA", xref="PMID:29899041"} property_value: RO:0001025 GO:0120206 {evidence="IDA", xref="PMID:29899041"} @@ -163617,8 +163617,8 @@ name: Nipped-B-like protein is_a: PR:000000001 property_value: IAO:0000028 "NIPBL" xsd:string property_value: RO:0002162 NCBITaxon:9606 -property_value: RO:0002331 GO:0007064 {evidence="IDA", xref="PMID:22628566"} property_value: RO:0002331 GO:0007064 {evidence="IMP", xref="PMID:16100726"} +property_value: RO:0002331 GO:0007064 {evidence="IDA", xref="PMID:22628566"} property_value: RO:0002331 GO:0034088 {evidence="IMP", xref="PMID:16682347"} property_value: RO:0002331 GO:0035261 {evidence="IMP", xref="PMID:19242925"} property_value: RO:0002331 GO:0035261 {evidence="IMP", xref="PMID:15146186"} @@ -164190,8 +164190,8 @@ is_a: PR:000000001 property_value: IAO:0000028 "Efcab6" xsd:string property_value: RO:0002162 NCBITaxon:10090 property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37295417"} -property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37865089"} property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37989994"} +property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37865089"} property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37295417"} property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37865089"} property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37989994"} @@ -164492,8 +164492,8 @@ property_value: RO:0002162 NCBITaxon:10090 property_value: RO:0002264 GO:0006611 {evidence="IMP", xref="PMID:18496528"} property_value: RO:0002264 GO:0006611 {evidence="IDA", xref="PMID:11796723"} property_value: RO:0002264 GO:0006611 {evidence="IMP", xref="PMID:19952108"} -property_value: RO:0002264 GO:0006611 {evidence="IMP", xref="PMID:11092755"} property_value: RO:0002264 GO:0006611 {evidence="IMP", xref="PMID:19699716"} +property_value: RO:0002264 GO:0006611 {evidence="IMP", xref="PMID:11092755"} property_value: RO:0002264 GO:0006611 {evidence="IDA", xref="PMID:12446771"} property_value: RO:0002264 GO:0006611 {evidence="IMP", xref="PMID:15767664"} property_value: RO:0002264 GO:0006611 {evidence="IMP", xref="PMID:16316410"} @@ -164602,8 +164602,8 @@ name: Calponin-homology (CH) domain-containing protein is_a: PR:000000001 property_value: IAO:0000028 "Utrn" xsd:string property_value: RO:0001025 GO:0031594 {evidence="IDA", xref="PMID:1461282"} -property_value: RO:0001025 GO:0031594 {evidence="IDA", xref="PMID:9674605"} property_value: RO:0001025 GO:0031594 {evidence="IDA", xref="PMID:12808150"} +property_value: RO:0001025 GO:0031594 {evidence="IDA", xref="PMID:9674605"} property_value: RO:0001025 GO:0031594 {evidence="IDA", xref="PMID:17119023"} property_value: RO:0001025 GO:0042383 {evidence="IDA", xref="PMID:12808150"} property_value: RO:0002162 NCBITaxon:10090 @@ -164682,15 +164682,15 @@ property_value: RO:0001025 GO:0005929 {evidence="IDA", xref="PMID:25296022"} property_value: RO:0001025 GO:0016324 {evidence="IDA", xref="PMID:25296022"} property_value: RO:0001025 GO:0036064 {evidence="IDA", xref="PMID:25296022"} property_value: RO:0002162 NCBITaxon:10090 -property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37865089"} property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37989994"} +property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37865089"} property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37295417"} -property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37989994"} property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37865089"} +property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37989994"} property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37295417"} property_value: RO:0002432 GO:0160112 {evidence="IDA", xref="PMID:37295417"} -property_value: RO:0002432 GO:0160112 {evidence="IDA", xref="PMID:37865089"} property_value: RO:0002432 GO:0160112 {evidence="IDA", xref="PMID:37989994"} +property_value: RO:0002432 GO:0160112 {evidence="IDA", xref="PMID:37865089"} [Term] id: https://identifiers.org/uniprot:Q6P8Y0 @@ -164698,14 +164698,14 @@ name: Cilia- and flagella-associated protein 161 is_a: PR:000000001 property_value: IAO:0000028 "Cfap161" xsd:string property_value: RO:0002162 NCBITaxon:10090 -property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37865089"} property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37989994"} +property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37865089"} property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37295417"} -property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37865089"} property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37989994"} +property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37865089"} property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37295417"} -property_value: RO:0002432 GO:0160111 {evidence="IDA", xref="PMID:37989994"} property_value: RO:0002432 GO:0160111 {evidence="IDA", xref="PMID:37865089"} +property_value: RO:0002432 GO:0160111 {evidence="IDA", xref="PMID:37989994"} property_value: RO:0002432 GO:0160111 {evidence="IDA", xref="PMID:37295417"} [Term] @@ -165897,8 +165897,8 @@ name: Relaxin receptor 1 is_a: PR:000000001 property_value: IAO:0000028 "Rxfp1" xsd:string property_value: RO:0002162 NCBITaxon:10090 -property_value: RO:0002264 GO:0007567 {evidence="IMP", xref="PMID:15256493"} property_value: RO:0002264 GO:0007567 {evidence="IMP", xref="PMID:14701741"} +property_value: RO:0002264 GO:0007567 {evidence="IMP", xref="PMID:15256493"} property_value: RO:0002264 GO:0036446 {evidence="IMP", xref="PMID:19073841"} [Term] @@ -166113,15 +166113,15 @@ property_value: RO:0001025 GO:0097728 {evidence="IDA", xref="PMID:29257953"} property_value: RO:0001025 GO:0097729 {evidence="IDA", xref="PMID:29257953"} property_value: RO:0002162 NCBITaxon:10090 property_value: RO:0002264 GO:0030317 {evidence="IMP", xref="PMID:29733335"} -property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37865089"} property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37989994"} +property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37865089"} property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37295417"} property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37989994"} property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37865089"} property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37295417"} property_value: RO:0002432 GO:0160112 {evidence="IDA", xref="PMID:37295417"} -property_value: RO:0002432 GO:0160112 {evidence="IDA", xref="PMID:37989994"} property_value: RO:0002432 GO:0160112 {evidence="IDA", xref="PMID:37865089"} +property_value: RO:0002432 GO:0160112 {evidence="IDA", xref="PMID:37989994"} [Term] id: https://identifiers.org/uniprot:Q6STE5 @@ -166656,8 +166656,8 @@ property_value: RO:0002331 GO:0050872 {evidence="IMP", xref="PMID:32901096"} property_value: RO:0002331 GO:0051402 {evidence="IMP", xref="PMID:29501420"} property_value: RO:0002331 GO:0060385 {evidence="IMP", xref="PMID:25473838"} property_value: RO:0002331 GO:0060466 {evidence="IMP", xref="PMID:22987720"} -property_value: RO:0002331 GO:0060466 {evidence="IMP", xref="PMID:23065701"} property_value: RO:0002331 GO:0060466 {evidence="IMP", xref="PMID:26522847"} +property_value: RO:0002331 GO:0060466 {evidence="IMP", xref="PMID:23065701"} property_value: RO:0002331 GO:1903537 {evidence="IMP", xref="PMID:22696190"} property_value: RO:0002331 GO:1903537 {evidence="IMP", xref="PMID:22987720"} property_value: RO:0002432 GO:0005929 {evidence="IDA", xref="PMID:28054671"} @@ -166821,8 +166821,8 @@ property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37295417"} property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37295417"} property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37989994"} property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37865089"} -property_value: RO:0002432 GO:0160111 {evidence="IDA", xref="PMID:37989994"} property_value: RO:0002432 GO:0160111 {evidence="IDA", xref="PMID:37865089"} +property_value: RO:0002432 GO:0160111 {evidence="IDA", xref="PMID:37989994"} property_value: RO:0002432 GO:0160111 {evidence="IDA", xref="PMID:37295417"} property_value: RO:0004034 GO:0060378 {evidence="IGI", xref="PMID:18951373"} @@ -167502,8 +167502,8 @@ name: Nesprin-2 is_a: PR:000000001 property_value: IAO:0000028 "Syne2" xsd:string property_value: RO:0001025 GO:0005635 {evidence="IDA", xref="PMID:15671068"} -property_value: RO:0001025 GO:0005635 {evidence="IDA", xref="PMID:20457914"} property_value: RO:0001025 GO:0005635 {evidence="IDA", xref="PMID:26506308"} +property_value: RO:0001025 GO:0005635 {evidence="IDA", xref="PMID:20457914"} property_value: RO:0001025 GO:0030016 {evidence="IDA", xref="PMID:15671068"} property_value: RO:0001025 GO:0030018 {evidence="IDA", xref="PMID:15671068"} property_value: RO:0001025 GO:0031965 {evidence="IDA", xref="PMID:22349700"} @@ -168785,8 +168785,8 @@ id: https://identifiers.org/uniprot:Q7TNH6 name: Nephrocystin-3 is_a: PR:000000001 property_value: IAO:0000028 "Nphp3" xsd:string -property_value: RO:0001025 GO:0097543 {evidence="IDA", xref="PMID:20169535"} property_value: RO:0001025 GO:0097543 {evidence="IDA", xref="PMID:29395339"} +property_value: RO:0001025 GO:0097543 {evidence="IDA", xref="PMID:20169535"} property_value: RO:0001025 GO:0097546 {evidence="IDA", xref="PMID:20169535"} property_value: RO:0002162 NCBITaxon:10090 @@ -171544,8 +171544,8 @@ id: https://identifiers.org/uniprot:Q80Z19 name: Mucin-2 is_a: PR:000000001 property_value: IAO:0000028 "Muc2" xsd:string -property_value: RO:0001025 GO:0031012 {evidence="IDA", xref="PMID:11352827"} property_value: RO:0001025 GO:0031012 {evidence="IDA", xref="PMID:19411636"} +property_value: RO:0001025 GO:0031012 {evidence="IDA", xref="PMID:11352827"} property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:22159717"} property_value: RO:0002162 NCBITaxon:10090 property_value: RO:0002264 GO:0002068 {evidence="IMP", xref="PMID:11872843"} @@ -171617,8 +171617,8 @@ property_value: RO:0002264 GO:0017145 {evidence="IDA", xref="PMID:12787505"} property_value: RO:0002264 GO:0019827 {evidence="IGI", xref="PMID:17938240"} property_value: RO:0002264 GO:0035019 {evidence="IMP", xref="PMID:16767105"} property_value: RO:0002264 GO:0035019 {evidence="IDA", xref="PMID:16801560"} -property_value: RO:0002264 GO:0035019 {evidence="IMP", xref="PMID:12787504"} property_value: RO:0002264 GO:0035019 {evidence="IMP", xref="PMID:20720539"} +property_value: RO:0002264 GO:0035019 {evidence="IMP", xref="PMID:12787504"} property_value: RO:0002264 GO:0048863 {evidence="IDA", xref="PMID:20123909"} property_value: RO:0002264 GO:0048863 {evidence="IMP", xref="PMID:16894029"} property_value: RO:0002331 GO:0008406 {evidence="IEP", xref="PMID:15108323"} @@ -171906,8 +171906,8 @@ name: Calponin-homology (CH) domain-containing protein is_a: PR:000000001 property_value: IAO:0000028 "Utrn" xsd:string property_value: RO:0001025 GO:0031594 {evidence="IDA", xref="PMID:17119023"} -property_value: RO:0001025 GO:0031594 {evidence="IDA", xref="PMID:12808150"} property_value: RO:0001025 GO:0031594 {evidence="IDA", xref="PMID:9674605"} +property_value: RO:0001025 GO:0031594 {evidence="IDA", xref="PMID:12808150"} property_value: RO:0001025 GO:0031594 {evidence="IDA", xref="PMID:1461282"} property_value: RO:0001025 GO:0042383 {evidence="IDA", xref="PMID:12808150"} property_value: RO:0002162 NCBITaxon:10090 @@ -172035,8 +172035,8 @@ id: https://identifiers.org/uniprot:Q811C1 name: Utrophin short isoform, Up109 is_a: PR:000000001 property_value: IAO:0000028 "Utrn" xsd:string -property_value: RO:0001025 GO:0031594 {evidence="IDA", xref="PMID:12808150"} property_value: RO:0001025 GO:0031594 {evidence="IDA", xref="PMID:9674605"} +property_value: RO:0001025 GO:0031594 {evidence="IDA", xref="PMID:12808150"} property_value: RO:0001025 GO:0031594 {evidence="IDA", xref="PMID:17119023"} property_value: RO:0001025 GO:0031594 {evidence="IDA", xref="PMID:1461282"} property_value: RO:0001025 GO:0042383 {evidence="IDA", xref="PMID:12808150"} @@ -172732,8 +172732,8 @@ id: https://identifiers.org/uniprot:Q86V48 name: Leucine zipper protein 1 is_a: PR:000000001 property_value: IAO:0000028 "LUZP1" xsd:string -property_value: RO:0001025 GO:0030496 {evidence="IDA", xref="PMID:32553112"} property_value: RO:0001025 GO:0030496 {evidence="IDA", xref="PMID:32496561"} +property_value: RO:0001025 GO:0030496 {evidence="IDA", xref="PMID:32553112"} property_value: RO:0001025 GO:0030496 {evidence="IDA", xref="PMID:38009294"} property_value: RO:0001025 GO:0036064 {evidence="IDA", xref="PMID:32496561"} property_value: RO:0002162 NCBITaxon:9606 @@ -174412,8 +174412,8 @@ is_a: PR:000000001 property_value: IAO:0000028 "Hook1" xsd:string property_value: RO:0002162 NCBITaxon:10090 property_value: RO:0002264 GO:0007286 {evidence="IMP", xref="PMID:12075009"} -property_value: RO:0002264 GO:1905198 {evidence="IMP", xref="PMID:16540102"} property_value: RO:0002264 GO:1905198 {evidence="IMP", xref="PMID:9674995"} +property_value: RO:0002264 GO:1905198 {evidence="IMP", xref="PMID:16540102"} [Term] id: https://identifiers.org/uniprot:Q8BIT2 @@ -175197,8 +175197,8 @@ name: Serine/threonine-protein kinase VRK2 is_a: PR:000000001 property_value: IAO:0000028 "Vrk2" xsd:string property_value: RO:0001025 GO:0005635 {evidence="IDA", xref="PMID:31142202"} -property_value: RO:0001025 GO:0005783 {evidence="IDA", xref="PMID:14645249"} property_value: RO:0001025 GO:0005783 {evidence="IDA", xref="PMID:31142202"} +property_value: RO:0001025 GO:0005783 {evidence="IDA", xref="PMID:14645249"} property_value: RO:0002162 NCBITaxon:10090 [Term] @@ -175328,8 +175328,8 @@ name: C-type lectin domain family 4 member G is_a: PR:000000001 property_value: IAO:0000028 "Clec4g" xsd:string property_value: RO:0002162 NCBITaxon:10090 -property_value: RO:0002263 GO:0002456 {evidence="IMP", xref="PMID:23487419"} property_value: RO:0002263 GO:0002456 {evidence="IMP", xref="PMID:19632227"} +property_value: RO:0002263 GO:0002456 {evidence="IMP", xref="PMID:23487419"} property_value: RO:0002263 GO:0033080 {evidence="IMP", xref="PMID:23487419"} property_value: RO:0002263 GO:0046633 {evidence="IMP", xref="PMID:23487419"} property_value: RO:0002264 GO:0002710 {evidence="IDA", xref="PMID:19632227"} @@ -175709,8 +175709,8 @@ name: Intraflagellar transport protein 56 is_a: PR:000000001 property_value: IAO:0000028 "Ift56" xsd:string property_value: RO:0001025 GO:0005929 {evidence="IDA", xref="PMID:24596149"} -property_value: RO:0001025 GO:0005929 {evidence="IDA", xref="PMID:19253336"} property_value: RO:0001025 GO:0005929 {evidence="IDA", xref="PMID:22718903"} +property_value: RO:0001025 GO:0005929 {evidence="IDA", xref="PMID:19253336"} property_value: RO:0001025 GO:0036064 {evidence="IDA", xref="PMID:22718903"} property_value: RO:0001025 GO:0036064 {evidence="IDA", xref="PMID:24596149"} property_value: RO:0001025 GO:0043005 {evidence="IDA", xref="PMID:22718903"} @@ -175876,8 +175876,8 @@ is_a: PR:000000001 property_value: IAO:0000028 "Lig4" xsd:string property_value: RO:0002162 NCBITaxon:10090 property_value: RO:0002263 GO:0022008 {evidence="IMP", xref="PMID:16777961"} -property_value: RO:0002263 GO:0022008 {evidence="IMP", xref="PMID:9875844"} property_value: RO:0002263 GO:0022008 {evidence="IMP", xref="PMID:10716994"} +property_value: RO:0002263 GO:0022008 {evidence="IMP", xref="PMID:9875844"} property_value: RO:0002263 GO:0048144 {evidence="IMP", xref="PMID:10911993"} property_value: RO:0002263 GO:0048144 {evidence="IMP", xref="PMID:9823897"} property_value: RO:0002263 GO:0051402 {evidence="IGI", xref="PMID:10911993"} @@ -175954,8 +175954,8 @@ property_value: IAO:0000028 "Cfap20" xsd:string property_value: RO:0001025 GO:0005929 {evidence="IDA", xref="PMID:22326026"} property_value: RO:0002162 NCBITaxon:10090 property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37295417"} -property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37989994"} property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37865089"} +property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37989994"} property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37989994"} property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37865089"} property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37295417"} @@ -177841,8 +177841,8 @@ is_a: PR:000000001 property_value: IAO:0000028 "Casp9" xsd:string property_value: RO:0002162 NCBITaxon:10090 property_value: RO:0002263 GO:0051402 {evidence="IGI", xref="PMID:11150333"} -property_value: RO:0002263 GO:0051402 {evidence="IMP", xref="PMID:11150333"} property_value: RO:0002263 GO:0051402 {evidence="IMP", xref="PMID:11092819"} +property_value: RO:0002263 GO:0051402 {evidence="IMP", xref="PMID:11150333"} property_value: RO:0002264 GO:0044346 {evidence="IDA", xref="PMID:12847083"} property_value: RO:0002264 GO:1904019 {evidence="IDA", xref="PMID:17901126"} @@ -179106,12 +179106,12 @@ name: EF-hand domain-containing family member B is_a: PR:000000001 property_value: IAO:0000028 "Efhb" xsd:string property_value: RO:0002162 NCBITaxon:10090 -property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37989994"} property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37865089"} +property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37989994"} property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37295417"} property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37295417"} -property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37989994"} property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37865089"} +property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37989994"} property_value: RO:0002432 GO:0160111 {evidence="IDA", xref="PMID:37865089"} property_value: RO:0002432 GO:0160111 {evidence="IDA", xref="PMID:37989994"} property_value: RO:0002432 GO:0160111 {evidence="IDA", xref="PMID:37295417"} @@ -179758,8 +179758,8 @@ property_value: RO:0001025 GO:0120199 {evidence="IDA", xref="PMID:28650316"} property_value: RO:0002162 NCBITaxon:10090 property_value: RO:0002331 GO:0007608 {evidence="IMP", xref="PMID:22057188"} property_value: RO:0002331 GO:0050911 {evidence="IMP", xref="PMID:28053034"} -property_value: RO:0002331 GO:0097186 {evidence="IMP", xref="PMID:23375655"} property_value: RO:0002331 GO:0097186 {evidence="IMP", xref="PMID:27752731"} +property_value: RO:0002331 GO:0097186 {evidence="IMP", xref="PMID:23375655"} property_value: RO:0002432 GO:0016324 {evidence="IDA", xref="PMID:27752731"} [Term] @@ -179787,8 +179787,8 @@ is_a: PR:000000001 property_value: IAO:0000028 "Piwil4" xsd:string property_value: RO:0002162 NCBITaxon:10090 property_value: RO:0002264 GO:0007283 {evidence="IMP", xref="PMID:25503965"} -property_value: RO:0002331 GO:0007283 {evidence="IMP", xref="PMID:17395546"} property_value: RO:0002331 GO:0007283 {evidence="IMP", xref="PMID:18381894"} +property_value: RO:0002331 GO:0007283 {evidence="IMP", xref="PMID:17395546"} property_value: RO:0002331 GO:0007283 {evidence="IMP", xref="PMID:22020280"} [Term] @@ -180356,8 +180356,8 @@ property_value: RO:0002264 GO:0006954 {evidence="IDA", xref="PMID:30573509"} property_value: RO:0002264 GO:0007596 {evidence="IMP", xref="PMID:9689113"} property_value: RO:0002264 GO:0007596 {evidence="IMP", xref="PMID:17380206"} property_value: RO:0002264 GO:0007596 {evidence="IMP", xref="PMID:21037087"} -property_value: RO:0002264 GO:0030168 {evidence="IMP", xref="PMID:21037087"} property_value: RO:0002264 GO:0030168 {evidence="IMP", xref="PMID:10930441"} +property_value: RO:0002264 GO:0030168 {evidence="IMP", xref="PMID:21037087"} [Term] id: https://identifiers.org/uniprot:Q8CIZ9 @@ -180406,8 +180406,8 @@ property_value: RO:0001025 GO:0001917 {evidence="IDA", xref="PMID:23178122"} property_value: RO:0001025 GO:0035253 {evidence="IDA", xref="PMID:16018997"} property_value: RO:0001025 GO:0035253 {evidence="IDA", xref="PMID:29891944"} property_value: RO:0001025 GO:0035253 {evidence="IDA", xref="PMID:21212183"} -property_value: RO:0001025 GO:0035253 {evidence="IMP", xref="PMID:15870283"} property_value: RO:0001025 GO:0035253 {evidence="IMP", xref="PMID:23178122"} +property_value: RO:0001025 GO:0035253 {evidence="IMP", xref="PMID:15870283"} property_value: RO:0001025 GO:0035253 {evidence="IDA", xref="PMID:23178122"} property_value: RO:0001025 GO:0097386 {evidence="IDA", xref="PMID:29891944"} property_value: RO:0001025 GO:0097729 {evidence="IDA", xref="PMID:29891944"} @@ -180658,8 +180658,8 @@ name: Adipocyte enhancer-binding protein 1 is_a: PR:000000001 property_value: IAO:0000028 "AEBP1" xsd:string property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:25037231"} -property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:28675934"} property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:28327460"} +property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:28675934"} property_value: RO:0002162 NCBITaxon:9606 property_value: RO:0002325 GO:0062023 {evidence="HDA", xref="PMID:20551380"} @@ -180914,8 +180914,8 @@ is_a: PR:000000001 property_value: IAO:0000028 "GCC2" xsd:string property_value: RO:0001025 GO:0005794 {evidence="IDA", xref="PMID:18243103"} property_value: RO:0001025 GO:0005794 {evidence="IDA", xref="GO_REF:0000052"} -property_value: RO:0001025 GO:0005802 {evidence="IDA", xref="PMID:16885419"} property_value: RO:0001025 GO:0005802 {evidence="IDA", xref="PMID:17488291"} +property_value: RO:0001025 GO:0005802 {evidence="IDA", xref="PMID:16885419"} property_value: RO:0002162 NCBITaxon:9606 property_value: RO:0002331 GO:0006622 {evidence="IMP", xref="PMID:16885419"} property_value: RO:0002331 GO:0034499 {evidence="IMP", xref="PMID:16885419"} @@ -180968,8 +180968,8 @@ is_a: PR:000000001 property_value: IAO:0000028 "LRRC8A" xsd:string property_value: RO:0001025 GO:0009986 {evidence="IDA", xref="PMID:14660746"} property_value: RO:0002162 NCBITaxon:9606 -property_value: RO:0002331 GO:0006884 {evidence="IMP", xref="PMID:24725410"} property_value: RO:0002331 GO:0006884 {evidence="IMP", xref="PMID:24790029"} +property_value: RO:0002331 GO:0006884 {evidence="IMP", xref="PMID:24725410"} property_value: RO:0002331 GO:0006884 {evidence="IDA", xref="PMID:33139539"} [Term] @@ -181017,8 +181017,8 @@ property_value: RO:0001025 GO:0005783 {evidence="IDA", xref="PMID:18687675"} property_value: RO:0001025 GO:0009986 {evidence="IDA", xref="PMID:12686563"} property_value: RO:0001025 GO:0009986 {evidence="IDA", xref="PMID:19520866"} property_value: RO:0001025 GO:0009986 {evidence="IDA", xref="PMID:12368295"} -property_value: RO:0001025 GO:0009986 {evidence="IDA", xref="PMID:19666466"} property_value: RO:0001025 GO:0009986 {evidence="IDA", xref="PMID:18687675"} +property_value: RO:0001025 GO:0009986 {evidence="IDA", xref="PMID:19666466"} property_value: RO:0002162 NCBITaxon:9606 property_value: RO:0002325 GO:0062023 {evidence="HDA", xref="PMID:28327460"} @@ -182284,8 +182284,8 @@ property_value: RO:0002264 GO:0014044 {evidence="IMP", xref="PMID:21068328"} property_value: RO:0002264 GO:0021782 {evidence="IMP", xref="PMID:21068328"} property_value: RO:0002264 GO:0022011 {evidence="IMP", xref="PMID:21068328"} property_value: RO:0002264 GO:0022011 {evidence="IMP", xref="PMID:20220021"} -property_value: RO:0002264 GO:0022011 {evidence="IMP", xref="PMID:1652607"} property_value: RO:0002264 GO:0022011 {evidence="IMP", xref="PMID:9671673"} +property_value: RO:0002264 GO:0022011 {evidence="IMP", xref="PMID:1652607"} property_value: RO:0002264 GO:0042063 {evidence="IGI", xref="PMID:21068328"} property_value: RO:0002264 GO:0042063 {evidence="IMP", xref="PMID:21068328"} property_value: RO:0002264 GO:0042551 {evidence="IMP", xref="PMID:15282162"} @@ -183883,8 +183883,8 @@ property_value: RO:0002162 NCBITaxon:9606 id: https://identifiers.org/uniprot:Q8N3I7 name: BBSome complex member BBS5 is_a: PR:000000001 -property_value: BFO:0000050 GO:0034464 {evidence="IDA", xref="PMID:20080638"} property_value: BFO:0000050 GO:0034464 {evidence="IDA", xref="PMID:17574030"} +property_value: BFO:0000050 GO:0034464 {evidence="IDA", xref="PMID:20080638"} property_value: BFO:0000050 GO:0034464 {evidence="IPI", xref="PMID:19081074"} property_value: BFO:0000050 GO:0034464 {evidence="IDA", xref="PMID:24550735"} property_value: BFO:0000050 GO:0060170 {evidence="IDA", xref="PMID:19081074"} @@ -185249,8 +185249,8 @@ property_value: IAO:0000028 "MCU" xsd:string property_value: RO:0002162 NCBITaxon:9606 property_value: RO:0002331 GO:0051560 {evidence="IDA", xref="PMID:32494073"} property_value: RO:0002331 GO:0051561 {evidence="IDA", xref="PMID:24560927"} -property_value: RO:0002331 GO:0051561 {evidence="IMP", xref="PMID:23755363"} property_value: RO:0002331 GO:0051561 {evidence="IDA", xref="PMID:21685888"} +property_value: RO:0002331 GO:0051561 {evidence="IMP", xref="PMID:23755363"} property_value: RO:0002331 GO:0051561 {evidence="IMP", xref="PMID:21685886"} property_value: RO:0002331 GO:0090023 {evidence="IMP", xref="PMID:28388446"} @@ -185738,8 +185738,8 @@ is_a: PR:000000001 property_value: IAO:0000028 "LILRB1" xsd:string property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:18094328"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:9285411"} -property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:17869268"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:21551166"} +property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:17869268"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:21233315"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:15585844"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:18684926"} @@ -186631,8 +186631,8 @@ id: https://identifiers.org/uniprot:Q8R2N1 name: Aquaporin-3 is_a: PR:000000001 property_value: IAO:0000028 "Aqp3" xsd:string -property_value: RO:0001025 GO:0016323 {evidence="IDA", xref="PMID:10322639"} property_value: RO:0001025 GO:0016323 {evidence="IDA", xref="PMID:15550389"} +property_value: RO:0001025 GO:0016323 {evidence="IDA", xref="PMID:10322639"} property_value: RO:0001025 GO:0016323 {evidence="IDA", xref="PMID:21178974"} property_value: RO:0002162 NCBITaxon:10090 property_value: RO:0002264 GO:0051649 {evidence="IMP", xref="PMID:11382807"} @@ -187818,8 +187818,8 @@ name: Organic anion transporter 3 is_a: PR:000000001 property_value: IAO:0000028 "SLC22A8" xsd:string property_value: RO:0001025 GO:0016323 {evidence="IDA", xref="PMID:27053689"} -property_value: RO:0001025 GO:0016323 {evidence="IDA", xref="PMID:15037815"} property_value: RO:0001025 GO:0016323 {evidence="IDA", xref="PMID:31791063"} +property_value: RO:0001025 GO:0016323 {evidence="IDA", xref="PMID:15037815"} property_value: RO:0001025 GO:0016324 {evidence="IDA", xref="PMID:31791063"} property_value: RO:0002162 NCBITaxon:9606 @@ -188225,8 +188225,8 @@ name: Serine/threonine-protein kinase Nek7 is_a: PR:000000001 property_value: IAO:0000028 "NEK7" xsd:string property_value: RO:0002162 NCBITaxon:9606 -property_value: RO:0002331 GO:1900227 {evidence="IDA", xref="PMID:39173637"} property_value: RO:0002331 GO:1900227 {evidence="IDA", xref="PMID:31189953"} +property_value: RO:0002331 GO:1900227 {evidence="IDA", xref="PMID:39173637"} property_value: RO:0002331 GO:1900227 {evidence="IDA", xref="PMID:36442502"} [Term] @@ -188423,8 +188423,8 @@ property_value: IAO:0000028 "IPO4" xsd:string property_value: RO:0002162 NCBITaxon:9606 property_value: RO:0002327 GO:0061608 {evidence="IDA", xref="PMID:16207705"} property_value: RO:0002327 GO:0061608 {evidence="IDA", xref="PMID:17682055"} -property_value: RO:0002331 GO:0006606 {evidence="IDA", xref="PMID:16207705"} property_value: RO:0002331 GO:0006606 {evidence="IDA", xref="PMID:11823430"} +property_value: RO:0002331 GO:0006606 {evidence="IDA", xref="PMID:16207705"} property_value: RO:0002331 GO:0006606 {evidence="IDA", xref="PMID:17682055"} [Term] @@ -189512,8 +189512,8 @@ name: Olfactory receptor 5AN6 is_a: PR:000000001 property_value: IAO:0000028 "Or5an6" xsd:string property_value: RO:0002162 NCBITaxon:10090 -property_value: RO:0002327 GO:0004984 {evidence="IMP", xref="PMID:27098692"} property_value: RO:0002327 GO:0004984 {evidence="IDA", xref="PMID:25411495"} +property_value: RO:0002327 GO:0004984 {evidence="IMP", xref="PMID:27098692"} property_value: RO:0002327 GO:0004984 {evidence="IMP", xref="PMID:30038239"} property_value: RO:0002331 GO:0007608 {evidence="IMP", xref="PMID:30038239"} property_value: RO:0002331 GO:0007608 {evidence="IMP", xref="PMID:27098692"} @@ -191048,8 +191048,8 @@ id: https://identifiers.org/uniprot:Q91V08 name: C-type lectin domain family 2 member D is_a: PR:000000001 property_value: IAO:0000028 "Clec2d" xsd:string -property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:12858173"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:14990792"} +property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:12858173"} property_value: RO:0002162 NCBITaxon:10090 property_value: RO:0002264 GO:0042270 {evidence="IDA", xref="PMID:14990792"} property_value: RO:0002264 GO:0042270 {evidence="IDA", xref="PMID:12858173"} @@ -191152,8 +191152,8 @@ property_value: IAO:0000028 "Ttll1" xsd:string property_value: RO:0001025 GO:0036064 {evidence="IDA", xref="PMID:17499049"} property_value: RO:0002162 NCBITaxon:10090 property_value: RO:0002264 GO:0002395 {evidence="IMP", xref="PMID:29440671"} -property_value: RO:0002264 GO:0007288 {evidence="IMP", xref="PMID:20442420"} property_value: RO:0002264 GO:0007288 {evidence="IMP", xref="PMID:20498047"} +property_value: RO:0002264 GO:0007288 {evidence="IMP", xref="PMID:20442420"} property_value: RO:0002264 GO:0021702 {evidence="IGI", xref="PMID:30420556"} property_value: RO:0002264 GO:0030317 {evidence="IMP", xref="PMID:20442420"} property_value: RO:0002264 GO:0120197 {evidence="IMP", xref="PMID:29440671"} @@ -191263,8 +191263,8 @@ property_value: RO:0001025 GO:0005783 {evidence="IDA", xref="PMID:21750264"} property_value: RO:0001025 GO:0005902 {evidence="IDA", xref="PMID:10518211"} property_value: RO:0001025 GO:0031526 {evidence="IDA", xref="PMID:14512415"} property_value: RO:0002162 NCBITaxon:10090 -property_value: RO:0002264 GO:0051649 {evidence="IMP", xref="PMID:10518211"} property_value: RO:0002264 GO:0051649 {evidence="IMP", xref="PMID:14512415"} +property_value: RO:0002264 GO:0051649 {evidence="IMP", xref="PMID:10518211"} [Term] id: https://identifiers.org/uniprot:Q91VE2 @@ -191317,8 +191317,8 @@ property_value: RO:0002331 GO:0070050 {evidence="IDA", xref="PMID:32350463"} property_value: RO:0002331 GO:0070269 {evidence="IDA", xref="PMID:32350463"} property_value: RO:0002331 GO:0070269 {evidence="IDA", xref="PMID:34006824"} property_value: RO:0002331 GO:0070269 {evidence="IDA", xref="PMID:29033131"} -property_value: RO:0002331 GO:0070269 {evidence="IDA", xref="PMID:19158676"} property_value: RO:0002331 GO:0070269 {evidence="IDA", xref="PMID:27846608"} +property_value: RO:0002331 GO:0070269 {evidence="IDA", xref="PMID:19158676"} [Term] id: https://identifiers.org/uniprot:Q91VJ5 @@ -191609,8 +191609,8 @@ id: https://identifiers.org/uniprot:Q91W98 name: Solute carrier family 15 member 4 is_a: PR:000000001 property_value: IAO:0000028 "Slc15a4" xsd:string -property_value: RO:0001025 GO:0010008 {evidence="IDA", xref="PMID:24695226"} property_value: RO:0001025 GO:0010008 {evidence="IDA", xref="PMID:29784761"} +property_value: RO:0001025 GO:0010008 {evidence="IDA", xref="PMID:24695226"} property_value: RO:0001025 GO:0031901 {evidence="IDA", xref="PMID:19570976"} property_value: RO:0002162 NCBITaxon:10090 property_value: RO:0002331 GO:0033023 {evidence="IMP", xref="PMID:29155995"} @@ -192391,8 +192391,8 @@ is_a: PR:000000001 property_value: IAO:0000028 "Baz2a" xsd:string property_value: RO:0001025 GO:0005730 {evidence="IDA", xref="PMID:19578370"} property_value: RO:0001025 GO:0005730 {evidence="IDA", xref="PMID:16085498"} -property_value: RO:0001025 GO:0005730 {evidence="IDA", xref="PMID:18600236"} property_value: RO:0001025 GO:0005730 {evidence="IDA", xref="PMID:16678107"} +property_value: RO:0001025 GO:0005730 {evidence="IDA", xref="PMID:18600236"} property_value: RO:0001025 GO:0005730 {evidence="IDA", xref="PMID:11532953"} property_value: RO:0001025 GO:0033553 {evidence="IDA", xref="PMID:19578370"} property_value: RO:0001025 GO:0033553 {evidence="IDA", xref="PMID:12198165"} @@ -192421,8 +192421,8 @@ property_value: RO:0001025 GO:0016323 {evidence="IDA", xref="PMID:16174750"} property_value: RO:0001025 GO:0016324 {evidence="IDA", xref="PMID:29993276"} property_value: RO:0001025 GO:0016324 {evidence="IDA", xref="PMID:16077082"} property_value: RO:0001025 GO:0016324 {evidence="IDA", xref="PMID:23028982"} -property_value: RO:0001025 GO:0016324 {evidence="IDA", xref="PMID:17392376"} property_value: RO:0001025 GO:0016324 {evidence="IDA", xref="PMID:16144965"} +property_value: RO:0001025 GO:0016324 {evidence="IDA", xref="PMID:17392376"} property_value: RO:0001025 GO:0016324 {evidence="IDA", xref="PMID:18667600"} property_value: RO:0002162 NCBITaxon:10090 property_value: RO:0002331 GO:0097401 {evidence="IMP", xref="PMID:28793259"} @@ -192869,8 +192869,8 @@ name: Serine/threonine-protein kinase Nek8 is_a: PR:000000001 property_value: IAO:0000028 "Nek8" xsd:string property_value: RO:0001025 GO:0005929 {evidence="IDA", xref="PMID:16267153"} -property_value: RO:0001025 GO:0097543 {evidence="IDA", xref="PMID:29395339"} property_value: RO:0001025 GO:0097543 {evidence="IDA", xref="PMID:20169535"} +property_value: RO:0001025 GO:0097543 {evidence="IDA", xref="PMID:29395339"} property_value: RO:0001025 GO:0097546 {evidence="IDA", xref="PMID:20169535"} property_value: RO:0002162 NCBITaxon:10090 @@ -193348,21 +193348,21 @@ property_value: RO:0001025 GO:0005794 {evidence="IDA", xref="PMID:29437892"} property_value: RO:0001025 GO:0005794 {evidence="IDA", xref="PMID:17765678"} property_value: RO:0001025 GO:0005794 {evidence="IDA", xref="PMID:16336229"} property_value: RO:0001025 GO:0005794 {evidence="IDA", xref="PMID:19061864"} -property_value: RO:0001025 GO:0005794 {evidence="IDA", xref="PMID:14622145"} property_value: RO:0001025 GO:0005794 {evidence="IDA", xref="PMID:20943658"} -property_value: RO:0001025 GO:0005794 {evidence="IDA", xref="PMID:23918928"} +property_value: RO:0001025 GO:0005794 {evidence="IDA", xref="PMID:14622145"} property_value: RO:0001025 GO:0005794 {evidence="IDA", xref="PMID:20368623"} +property_value: RO:0001025 GO:0005794 {evidence="IDA", xref="PMID:23918928"} property_value: RO:0001025 GO:0005794 {evidence="IDA", xref="PMID:17204322"} property_value: RO:0001025 GO:0005794 {evidence="IDA", xref="PMID:15452145"} -property_value: RO:0001025 GO:0005794 {evidence="IDA", xref="PMID:26582200"} property_value: RO:0001025 GO:0005794 {evidence="IDA", xref="PMID:16413118"} +property_value: RO:0001025 GO:0005794 {evidence="IDA", xref="PMID:26582200"} property_value: RO:0001025 GO:0005794 {evidence="IDA", xref="PMID:17003038"} property_value: RO:0001025 GO:0005801 {evidence="IDA", xref="PMID:19956733"} property_value: RO:0001025 GO:0005801 {evidence="IDA", xref="PMID:25208654"} property_value: RO:0001025 GO:0005801 {evidence="IDA", xref="PMID:14728599"} property_value: RO:0001025 GO:0005801 {evidence="IDA", xref="PMID:22841714"} -property_value: RO:0001025 GO:0005801 {evidence="IDA", xref="PMID:16399995"} property_value: RO:0001025 GO:0005801 {evidence="IDA", xref="PMID:21640725"} +property_value: RO:0001025 GO:0005801 {evidence="IDA", xref="PMID:16399995"} property_value: RO:0001025 GO:0005801 {evidence="IDA", xref="PMID:21187406"} property_value: RO:0001025 GO:0005801 {evidence="IDA", xref="PMID:27655914"} property_value: RO:0001025 GO:0005801 {evidence="IDA", xref="PMID:21111240"} @@ -193450,12 +193450,12 @@ is_a: PR:000000001 property_value: IAO:0000028 "Tekt2" xsd:string property_value: RO:0002162 NCBITaxon:10090 property_value: RO:0002264 GO:0030317 {evidence="IMP", xref="PMID:15340058"} -property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37989994"} property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37865089"} +property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37989994"} property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37295417"} property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37295417"} -property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37865089"} property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37989994"} +property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37865089"} property_value: RO:0002432 GO:0160111 {evidence="IDA", xref="PMID:37295417"} property_value: RO:0002432 GO:0160111 {evidence="IDA", xref="PMID:37989994"} property_value: RO:0002432 GO:0160111 {evidence="IDA", xref="PMID:37865089"} @@ -193982,8 +193982,8 @@ property_value: RO:0002162 NCBITaxon:9606 id: https://identifiers.org/uniprot:Q92535 name: Phosphatidylinositol N-acetylglucosaminyltransferase subunit C is_a: PR:000000001 -property_value: BFO:0000050 GO:0000506 {evidence="IDA", xref="PMID:10944123"} property_value: BFO:0000050 GO:0000506 {evidence="IPI", xref="PMID:16162815"} +property_value: BFO:0000050 GO:0000506 {evidence="IDA", xref="PMID:10944123"} property_value: BFO:0000050 GO:0000506 {evidence="IDA", xref="PMID:16162815"} property_value: BFO:0000050 GO:0005789 {evidence="IDA", xref="PMID:16162815"} property_value: IAO:0000028 "PIGC" xsd:string @@ -194668,8 +194668,8 @@ property_value: RO:0001025 GO:0005794 {evidence="IDA", xref="PMID:30394292"} property_value: RO:0002162 NCBITaxon:9606 property_value: RO:0002331 GO:0030213 {evidence="IDA", xref="PMID:30394292"} property_value: RO:0002331 GO:0030213 {evidence="IDA", xref="PMID:17324121"} -property_value: RO:0002331 GO:0030213 {evidence="IMP", xref="PMID:22016393"} property_value: RO:0002331 GO:0030213 {evidence="IMP", xref="PMID:20507985"} +property_value: RO:0002331 GO:0030213 {evidence="IMP", xref="PMID:22016393"} [Term] id: https://identifiers.org/uniprot:Q92823 @@ -196023,12 +196023,12 @@ property_value: IAO:0000028 "TIFA" xsd:string property_value: RO:0002162 NCBITaxon:9606 property_value: RO:0002331 GO:0002753 {evidence="IDA", xref="PMID:28222186"} property_value: RO:0002331 GO:0002753 {evidence="IDA", xref="PMID:28877472"} -property_value: RO:0002331 GO:0002753 {evidence="IDA", xref="PMID:30111836"} property_value: RO:0002331 GO:0002753 {evidence="IDA", xref="PMID:26068852"} +property_value: RO:0002331 GO:0002753 {evidence="IDA", xref="PMID:30111836"} property_value: RO:0002331 GO:0045087 {evidence="IDA", xref="PMID:28877472"} property_value: RO:0002331 GO:0045087 {evidence="IDA", xref="PMID:28222186"} -property_value: RO:0002331 GO:0045087 {evidence="IDA", xref="PMID:26068852"} property_value: RO:0002331 GO:0045087 {evidence="IDA", xref="PMID:30111836"} +property_value: RO:0002331 GO:0045087 {evidence="IDA", xref="PMID:26068852"} [Term] id: https://identifiers.org/uniprot:Q96CG8 @@ -197199,8 +197199,8 @@ is_a: PR:000000001 property_value: IAO:0000028 "DNAH8" xsd:string property_value: RO:0001025 GO:0005930 {evidence="IDA", xref="PMID:31178125"} property_value: RO:0001025 GO:0005930 {evidence="IMP", xref="PMID:32619401"} -property_value: RO:0001025 GO:0036126 {evidence="IDA", xref="PMID:31178125"} property_value: RO:0001025 GO:0036126 {evidence="IMP", xref="PMID:32619401"} +property_value: RO:0001025 GO:0036126 {evidence="IDA", xref="PMID:31178125"} property_value: RO:0002162 NCBITaxon:9606 [Term] @@ -197210,8 +197210,8 @@ is_a: PR:000000001 property_value: BFO:0000050 GO:0017119 {evidence="IDA", xref="PMID:15047703"} property_value: BFO:0000050 GO:0017119 {evidence="IDA", xref="PMID:11292827"} property_value: IAO:0000028 "COG3" xsd:string -property_value: RO:0001025 GO:0005794 {evidence="IDA", xref="PMID:11980916"} property_value: RO:0001025 GO:0005794 {evidence="IDA", xref="GO_REF:0000052"} +property_value: RO:0001025 GO:0005794 {evidence="IDA", xref="PMID:11980916"} property_value: RO:0002162 NCBITaxon:9606 property_value: RO:0002331 GO:0006888 {evidence="IDA", xref="PMID:11929878"} @@ -198042,13 +198042,13 @@ property_value: RO:0002331 GO:0002674 {evidence="IMP", xref="PMID:11687797"} property_value: RO:0002331 GO:0006954 {evidence="IDA", xref="PMID:18403674"} property_value: RO:0002331 GO:0006954 {evidence="IDA", xref="PMID:17483456"} property_value: RO:0002331 GO:0006954 {evidence="IDA", xref="PMID:16407889"} -property_value: RO:0002331 GO:0006954 {evidence="IMP", xref="PMID:28847925"} property_value: RO:0002331 GO:0006954 {evidence="IMP", xref="PMID:12093792"} +property_value: RO:0002331 GO:0006954 {evidence="IMP", xref="PMID:28847925"} property_value: RO:0002331 GO:0006954 {evidence="IDA", xref="PMID:18604214"} -property_value: RO:0002331 GO:0044546 {evidence="IDA", xref="PMID:23582325"} property_value: RO:0002331 GO:0044546 {evidence="IDA", xref="PMID:36442502"} -property_value: RO:0002331 GO:0044546 {evidence="IDA", xref="PMID:28656979"} +property_value: RO:0002331 GO:0044546 {evidence="IDA", xref="PMID:23582325"} property_value: RO:0002331 GO:0044546 {evidence="IDA", xref="PMID:33231615"} +property_value: RO:0002331 GO:0044546 {evidence="IDA", xref="PMID:28656979"} property_value: RO:0002331 GO:0044546 {evidence="IDA", xref="PMID:17483456"} property_value: RO:0002331 GO:0044546 {evidence="IDA", xref="PMID:35254907"} property_value: RO:0002331 GO:0044546 {evidence="IDA", xref="PMID:35559676"} @@ -198069,8 +198069,8 @@ property_value: RO:0002331 GO:0050728 {evidence="IMP", xref="PMID:17178985"} property_value: RO:0002331 GO:0050729 {evidence="IDA", xref="PMID:31086327"} property_value: RO:0002331 GO:0050729 {evidence="IDA", xref="PMID:31086329"} property_value: RO:0002331 GO:0050729 {evidence="IDA", xref="PMID:35559676"} -property_value: RO:0002331 GO:0050729 {evidence="IDA", xref="PMID:31189953"} property_value: RO:0002331 GO:0050729 {evidence="IDA", xref="PMID:35114687"} +property_value: RO:0002331 GO:0050729 {evidence="IDA", xref="PMID:31189953"} property_value: RO:0002331 GO:0050729 {evidence="IDA", xref="PMID:25686105"} property_value: RO:0002331 GO:0050729 {evidence="IDA", xref="PMID:35254907"} @@ -198398,8 +198398,8 @@ name: Kinesin-like protein KIF20B is_a: PR:000000001 property_value: IAO:0000028 "KIF20B" xsd:string property_value: RO:0001025 GO:0005730 {evidence="IDA", xref="PMID:11470801"} -property_value: RO:0001025 GO:0030496 {evidence="IDA", xref="PMID:12740395"} property_value: RO:0001025 GO:0030496 {evidence="IDA", xref="GO_REF:0000052"} +property_value: RO:0001025 GO:0030496 {evidence="IDA", xref="PMID:12740395"} property_value: RO:0001025 GO:0030496 {evidence="IDA", xref="PMID:17409436"} property_value: RO:0001025 GO:0070938 {evidence="IDA", xref="PMID:17409436"} property_value: RO:0002162 NCBITaxon:9606 @@ -198632,8 +198632,8 @@ id: https://identifiers.org/uniprot:Q96RL7 name: Intermembrane lipid transfer protein VPS13A is_a: PR:000000001 property_value: IAO:0000028 "VPS13A" xsd:string -property_value: RO:0001025 GO:0005789 {evidence="IDA", xref="PMID:30741634"} property_value: RO:0001025 GO:0005789 {evidence="IDA", xref="PMID:32845802"} +property_value: RO:0001025 GO:0005789 {evidence="IDA", xref="PMID:30741634"} property_value: RO:0001025 GO:0005789 {evidence="IDA", xref="PMID:30093493"} property_value: RO:0001025 GO:0005789 {evidence="IDA", xref="PMID:30709847"} property_value: RO:0001025 GO:0010008 {evidence="IDA", xref="PMID:30709847"} @@ -199532,8 +199532,8 @@ id: https://identifiers.org/uniprot:Q99715 name: Collagen alpha-1(XII) chain is_a: PR:000000001 property_value: IAO:0000028 "COL12A1" xsd:string -property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:28327460"} property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:28675934"} +property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:28327460"} property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:23658023"} property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:23979707"} property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:25037231"} @@ -199605,8 +199605,8 @@ id: https://identifiers.org/uniprot:Q99732 name: Lipopolysaccharide-induced tumor necrosis factor-alpha factor is_a: PR:000000001 property_value: IAO:0000028 "LITAF" xsd:string -property_value: RO:0001025 GO:0005794 {evidence="IDA", xref="GO_REF:0000052"} property_value: RO:0001025 GO:0005794 {evidence="IDA", xref="PMID:15064722"} +property_value: RO:0001025 GO:0005794 {evidence="IDA", xref="GO_REF:0000052"} property_value: RO:0001025 GO:0005794 {evidence="IMP", xref="PMID:16118794"} property_value: RO:0001025 GO:0098559 {evidence="IDA", xref="PMID:27582497"} property_value: RO:0001025 GO:0098560 {evidence="IDA", xref="PMID:27582497"} @@ -200123,8 +200123,8 @@ property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:10229823"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:10229828"} property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:12858173"} property_value: RO:0002162 NCBITaxon:10090 -property_value: RO:0002264 GO:0045953 {evidence="IDA", xref="PMID:14990792"} property_value: RO:0002264 GO:0045953 {evidence="IDA", xref="PMID:12858173"} +property_value: RO:0002264 GO:0045953 {evidence="IDA", xref="PMID:14990792"} property_value: RO:0002264 GO:0045953 {evidence="IGI", xref="PMID:19535641"} property_value: RO:0002264 GO:0045953 {evidence="IDA", xref="PMID:10229823"} property_value: RO:0002264 GO:0045953 {evidence="IDA", xref="PMID:10229828"} @@ -200397,8 +200397,8 @@ property_value: RO:0001025 GO:0009986 {evidence="IDA", xref="PMID:26440732"} property_value: RO:0001025 GO:0009986 {evidence="IDA", xref="PMID:23791195"} property_value: RO:0002162 NCBITaxon:10090 property_value: RO:0002331 GO:0016080 {evidence="IMP", xref="PMID:10892652"} -property_value: RO:0002331 GO:0097091 {evidence="IDA", xref="PMID:12796785"} property_value: RO:0002331 GO:0097091 {evidence="IDA", xref="PMID:10892652"} +property_value: RO:0002331 GO:0097091 {evidence="IDA", xref="PMID:12796785"} [Term] id: https://identifiers.org/uniprot:Q99K23 @@ -201543,8 +201543,8 @@ property_value: IAO:0000028 "Nkg7" xsd:string property_value: RO:0002162 NCBITaxon:10090 property_value: RO:0002331 GO:0002420 {evidence="IMP", xref="PMID:32839608"} property_value: RO:0002331 GO:0035710 {evidence="IMP", xref="PMID:32839608"} -property_value: RO:0002331 GO:0042267 {evidence="IMP", xref="PMID:32839608"} property_value: RO:0002331 GO:0042267 {evidence="IMP", xref="PMID:33911019"} +property_value: RO:0002331 GO:0042267 {evidence="IMP", xref="PMID:32839608"} property_value: RO:0002331 GO:0043320 {evidence="IMP", xref="PMID:32839608"} property_value: RO:0002331 GO:0043320 {evidence="IMP", xref="PMID:33911019"} property_value: RO:0002331 GO:0050729 {evidence="IMP", xref="PMID:32839608"} @@ -201652,8 +201652,8 @@ property_value: RO:0002264 GO:0042491 {evidence="IMP", xref="PMID:16481439"} property_value: RO:0002264 GO:0050910 {evidence="IMP", xref="PMID:16481439"} property_value: RO:0002264 GO:0050973 {evidence="IMP", xref="PMID:16481439"} property_value: RO:0002264 GO:0060088 {evidence="IGI", xref="PMID:15537665"} -property_value: RO:0002264 GO:0060088 {evidence="IMP", xref="PMID:10978835"} property_value: RO:0002264 GO:0060088 {evidence="IMP", xref="PMID:23217710"} +property_value: RO:0002264 GO:0060088 {evidence="IMP", xref="PMID:10978835"} property_value: RO:0002264 GO:0060088 {evidence="IMP", xref="PMID:11124469"} property_value: RO:0002264 GO:0060088 {evidence="IMP", xref="PMID:16887306"} property_value: RO:0002264 GO:0060122 {evidence="IMP", xref="PMID:18339676"} @@ -203989,8 +203989,8 @@ property_value: RO:0002331 GO:1904784 {evidence="IDA", xref="PMID:33420028"} property_value: RO:0002331 GO:1904784 {evidence="IMP", xref="PMID:31484767"} property_value: RO:0002331 GO:1904784 {evidence="IDA", xref="PMID:22665479"} property_value: RO:0002331 GO:1904784 {evidence="IDA", xref="PMID:33852854"} -property_value: RO:0002331 GO:1904784 {evidence="IDA", xref="PMID:33420033"} property_value: RO:0002331 GO:1904784 {evidence="IMP", xref="PMID:27662089"} +property_value: RO:0002331 GO:1904784 {evidence="IDA", xref="PMID:33420033"} property_value: RO:0002331 GO:1904784 {evidence="IDA", xref="PMID:35594856"} [Term] @@ -204555,14 +204555,14 @@ is_a: PR:000000001 property_value: IAO:0000028 "Cfap95" xsd:string property_value: RO:0002162 NCBITaxon:10090 property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37295417"} -property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37865089"} property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37989994"} +property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37865089"} property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37295417"} property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37865089"} property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37989994"} property_value: RO:0002432 GO:0160111 {evidence="IDA", xref="PMID:37295417"} -property_value: RO:0002432 GO:0160111 {evidence="IDA", xref="PMID:37989994"} property_value: RO:0002432 GO:0160111 {evidence="IDA", xref="PMID:37865089"} +property_value: RO:0002432 GO:0160111 {evidence="IDA", xref="PMID:37989994"} [Term] id: https://identifiers.org/uniprot:Q9CQC4 @@ -205268,8 +205268,8 @@ name: Protein SIX6OS1 is_a: PR:000000001 property_value: IAO:0000028 "Six6os1" xsd:string property_value: RO:0002162 NCBITaxon:10090 -property_value: RO:0002331 GO:0007129 {evidence="IMP", xref="PMID:27796301"} property_value: RO:0002331 GO:0007129 {evidence="IMP", xref="PMID:33508233"} +property_value: RO:0002331 GO:0007129 {evidence="IMP", xref="PMID:27796301"} property_value: RO:0002331 GO:0007130 {evidence="IMP", xref="PMID:33508233"} property_value: RO:0002331 GO:0007283 {evidence="IMP", xref="PMID:33508233"} property_value: RO:0002331 GO:0007283 {evidence="IMP", xref="PMID:27796301"} @@ -205599,8 +205599,8 @@ is_a: PR:000000001 property_value: IAO:0000028 "Rnf135" xsd:string property_value: RO:0002162 NCBITaxon:10090 property_value: RO:0002331 GO:0039529 {evidence="IMP", xref="PMID:21147464"} -property_value: RO:0002331 GO:0039529 {evidence="IMP", xref="PMID:28469175"} property_value: RO:0002331 GO:0039529 {evidence="IGI", xref="PMID:21147464"} +property_value: RO:0002331 GO:0039529 {evidence="IMP", xref="PMID:28469175"} property_value: RO:0002331 GO:0140374 {evidence="IMP", xref="PMID:23950712"} property_value: RO:0002331 GO:0140374 {evidence="IMP", xref="PMID:21147464"} @@ -206154,8 +206154,8 @@ id: https://identifiers.org/uniprot:Q9CZT8 name: Ras-related protein Rab-3B is_a: PR:000000001 property_value: IAO:0000028 "Rab3b" xsd:string -property_value: RO:0001025 GO:0008021 {evidence="IDA", xref="PMID:12167638"} property_value: RO:0001025 GO:0008021 {evidence="IDA", xref="PMID:12192047"} +property_value: RO:0001025 GO:0008021 {evidence="IDA", xref="PMID:12167638"} property_value: RO:0002162 NCBITaxon:10090 property_value: RO:0002325 GO:0030141 {evidence="IDA", xref="PMID:16043482"} @@ -207187,12 +207187,12 @@ property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37865089"} property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37989994"} property_value: RO:0002331 GO:0120316 {evidence="IMP", xref="PMID:34124066"} property_value: RO:0002331 GO:1905198 {evidence="IMP", xref="PMID:34124066"} -property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37865089"} property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37989994"} +property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37865089"} property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37295417"} property_value: RO:0002432 GO:0160111 {evidence="IDA", xref="PMID:37295417"} -property_value: RO:0002432 GO:0160111 {evidence="IDA", xref="PMID:37989994"} property_value: RO:0002432 GO:0160111 {evidence="IDA", xref="PMID:37865089"} +property_value: RO:0002432 GO:0160111 {evidence="IDA", xref="PMID:37989994"} [Term] id: https://identifiers.org/uniprot:Q9D451 @@ -207209,8 +207209,8 @@ is_a: PR:000000001 property_value: IAO:0000028 "Efhc2" xsd:string property_value: RO:0002162 NCBITaxon:10090 property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37295417"} -property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37989994"} property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37865089"} +property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37989994"} property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37295417"} property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37989994"} property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37865089"} @@ -207374,15 +207374,15 @@ name: Tektin-like protein 1 is_a: PR:000000001 property_value: IAO:0000028 "Tektl1" xsd:string property_value: RO:0002162 NCBITaxon:10090 -property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37865089"} property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37989994"} +property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37865089"} property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37295417"} -property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37989994"} property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37865089"} +property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37989994"} property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37295417"} property_value: RO:0002432 GO:0160112 {evidence="IDA", xref="PMID:37295417"} -property_value: RO:0002432 GO:0160112 {evidence="IDA", xref="PMID:37989994"} property_value: RO:0002432 GO:0160112 {evidence="IDA", xref="PMID:37865089"} +property_value: RO:0002432 GO:0160112 {evidence="IDA", xref="PMID:37989994"} [Term] id: https://identifiers.org/uniprot:Q9D4M9 @@ -207402,8 +207402,8 @@ property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37865089"} property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37989994"} property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37295417"} property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37295417"} -property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37865089"} property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37989994"} +property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37865089"} property_value: RO:0002432 GO:0160111 {evidence="IDA", xref="PMID:37865089"} property_value: RO:0002432 GO:0160111 {evidence="IDA", xref="PMID:37989994"} property_value: RO:0002432 GO:0160111 {evidence="IDA", xref="PMID:37295417"} @@ -207586,16 +207586,16 @@ property_value: RO:0002264 GO:0051598 {evidence="IMP", xref="PMID:22530760"} property_value: RO:0002331 GO:0007130 {evidence="IMP", xref="PMID:21478856"} property_value: RO:0002331 GO:0007283 {evidence="IMP", xref="PMID:21478856"} property_value: RO:0002331 GO:0007283 {evidence="IMP", xref="PMID:21079677"} -property_value: RO:0002331 GO:0042138 {evidence="IMP", xref="PMID:21079677"} property_value: RO:0002331 GO:0042138 {evidence="IMP", xref="PMID:21478856"} +property_value: RO:0002331 GO:0042138 {evidence="IMP", xref="PMID:21079677"} property_value: RO:0002331 GO:0048477 {evidence="IMP", xref="PMID:21478856"} property_value: RO:0002331 GO:0048477 {evidence="IMP", xref="PMID:21079677"} property_value: RO:0002331 GO:0051177 {evidence="IMP", xref="PMID:21079677"} property_value: RO:0002331 GO:0051177 {evidence="IMP", xref="PMID:21478856"} property_value: RO:0002331 GO:0051321 {evidence="IEP", xref="PMID:19686734"} property_value: RO:0002331 GO:0051321 {evidence="IEP", xref="PMID:19851446"} -property_value: RO:0002331 GO:0051598 {evidence="IMP", xref="PMID:21478856"} property_value: RO:0002331 GO:0051598 {evidence="IMP", xref="PMID:21079677"} +property_value: RO:0002331 GO:0051598 {evidence="IMP", xref="PMID:21478856"} [Term] id: https://identifiers.org/uniprot:Q9D5U8 @@ -208044,8 +208044,8 @@ name: Zinc transporter ZIP5 is_a: PR:000000001 property_value: IAO:0000028 "Slc39a5" xsd:string property_value: RO:0001025 GO:0016323 {evidence="IDA", xref="PMID:15322118"} -property_value: RO:0001025 GO:0016323 {evidence="IDA", xref="PMID:18020946"} property_value: RO:0001025 GO:0016323 {evidence="IDA", xref="PMID:15358787"} +property_value: RO:0001025 GO:0016323 {evidence="IDA", xref="PMID:18020946"} property_value: RO:0002162 NCBITaxon:10090 [Term] @@ -208435,8 +208435,8 @@ property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37989994"} property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37295417"} property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37865089"} property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37989994"} -property_value: RO:0002432 GO:0160111 {evidence="IDA", xref="PMID:37865089"} property_value: RO:0002432 GO:0160111 {evidence="IDA", xref="PMID:37989994"} +property_value: RO:0002432 GO:0160111 {evidence="IDA", xref="PMID:37865089"} property_value: RO:0002432 GO:0160111 {evidence="IDA", xref="PMID:37295417"} [Term] @@ -208559,8 +208559,8 @@ property_value: RO:0002162 NCBITaxon:10090 property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37295417"} property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37865089"} property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37989994"} -property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37865089"} property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37989994"} +property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37865089"} property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37295417"} property_value: RO:0002432 GO:0160111 {evidence="IDA", xref="PMID:37295417"} property_value: RO:0002432 GO:0160111 {evidence="IDA", xref="PMID:37989994"} @@ -208586,8 +208586,8 @@ property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37989994"} property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37865089"} property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37295417"} property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37295417"} -property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37989994"} property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37865089"} +property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37989994"} property_value: RO:0002432 GO:0160112 {evidence="IDA", xref="PMID:37989994"} property_value: RO:0002432 GO:0160112 {evidence="IDA", xref="PMID:37865089"} property_value: RO:0002432 GO:0160112 {evidence="IDA", xref="PMID:37295417"} @@ -208781,13 +208781,13 @@ is_a: PR:000000001 property_value: IAO:0000028 "Cfap276" xsd:string property_value: RO:0002162 NCBITaxon:10090 property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37295417"} -property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37989994"} property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37865089"} -property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37865089"} +property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37989994"} property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37989994"} +property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37865089"} property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37295417"} -property_value: RO:0002432 GO:0160112 {evidence="IDA", xref="PMID:37865089"} property_value: RO:0002432 GO:0160112 {evidence="IDA", xref="PMID:37989994"} +property_value: RO:0002432 GO:0160112 {evidence="IDA", xref="PMID:37865089"} property_value: RO:0002432 GO:0160112 {evidence="IDA", xref="PMID:37295417"} [Term] @@ -208859,10 +208859,10 @@ is_a: PR:000000001 property_value: IAO:0000028 "Tekt1" xsd:string property_value: RO:0002162 NCBITaxon:10090 property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37295417"} -property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37865089"} property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37989994"} -property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37865089"} +property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37865089"} property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37989994"} +property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37865089"} property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37295417"} property_value: RO:0002432 GO:0160111 {evidence="IDA", xref="PMID:37295417"} property_value: RO:0002432 GO:0160111 {evidence="IDA", xref="PMID:37865089"} @@ -208874,8 +208874,8 @@ name: WD repeat domain-containing protein 83 is_a: PR:000000001 property_value: IAO:0000028 "Wdr83" xsd:string property_value: RO:0002162 NCBITaxon:10090 -property_value: RO:0002264 GO:0090594 {evidence="IMP", xref="PMID:25550320"} property_value: RO:0002264 GO:0090594 {evidence="IMP", xref="PMID:29402223"} +property_value: RO:0002264 GO:0090594 {evidence="IMP", xref="PMID:25550320"} [Term] id: https://identifiers.org/uniprot:Q9DAK2 @@ -208891,13 +208891,13 @@ property_value: RO:0001025 GO:0097386 {evidence="IDA", xref="PMID:19463890"} property_value: RO:0002162 NCBITaxon:10090 property_value: RO:0002264 GO:0007286 {evidence="IGI", xref="PMID:15148410"} property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37295417"} -property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37989994"} property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37865089"} +property_value: RO:0002331 GO:0030317 {evidence="IDA", xref="PMID:37989994"} property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37295417"} -property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37865089"} property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37989994"} -property_value: RO:0002432 GO:0160112 {evidence="IDA", xref="PMID:37989994"} +property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37865089"} property_value: RO:0002432 GO:0160112 {evidence="IDA", xref="PMID:37865089"} +property_value: RO:0002432 GO:0160112 {evidence="IDA", xref="PMID:37989994"} property_value: RO:0002432 GO:0160112 {evidence="IDA", xref="PMID:37295417"} [Term] @@ -209463,8 +209463,8 @@ property_value: RO:0002162 NCBITaxon:10090 property_value: RO:0002331 GO:0043374 {evidence="IDA", xref="PMID:25644000"} property_value: RO:0002331 GO:0045087 {evidence="IMP", xref="PMID:10639151"} property_value: RO:0002331 GO:0045087 {evidence="IMP", xref="PMID:11500431"} -property_value: RO:0002331 GO:0071346 {evidence="IDA", xref="PMID:11500431"} property_value: RO:0002331 GO:0071346 {evidence="IDA", xref="PMID:18765738"} +property_value: RO:0002331 GO:0071346 {evidence="IDA", xref="PMID:11500431"} property_value: RO:0002331 GO:0071346 {evidence="IDA", xref="PMID:12438372"} property_value: RO:0002432 GO:0005783 {evidence="IDA", xref="PMID:9099712"} @@ -210534,8 +210534,8 @@ property_value: RO:0001025 GO:0030027 {evidence="IDA", xref="PMID:28483977"} property_value: RO:0001025 GO:0030175 {evidence="IDA", xref="PMID:28483977"} property_value: RO:0001025 GO:0030424 {evidence="IDA", xref="PMID:23434913"} property_value: RO:0001025 GO:0030424 {evidence="IDA", xref="PMID:18076286"} -property_value: RO:0001025 GO:0030424 {evidence="IDA", xref="PMID:15255972"} property_value: RO:0001025 GO:0030424 {evidence="IDA", xref="PMID:17761882"} +property_value: RO:0001025 GO:0030424 {evidence="IDA", xref="PMID:15255972"} property_value: RO:0001025 GO:0030424 {evidence="IDA", xref="PMID:28426968"} property_value: RO:0001025 GO:0030424 {evidence="IDA", xref="PMID:18614158"} property_value: RO:0001025 GO:0030424 {evidence="IDA", xref="PMID:22949634"} @@ -210989,8 +210989,8 @@ property_value: RO:0002162 NCBITaxon:10090 property_value: RO:0002264 GO:0016079 {evidence="IMP", xref="PMID:25609709"} property_value: RO:0002331 GO:0016079 {evidence="IMP", xref="PMID:17055430"} property_value: RO:0002331 GO:0016079 {evidence="EXP", xref="PMID:17055430"} -property_value: RO:0002331 GO:0016079 {evidence="IDA", xref="PMID:17055430"} property_value: RO:0002331 GO:0016079 {evidence="IDA", xref="PMID:18287496"} +property_value: RO:0002331 GO:0016079 {evidence="IDA", xref="PMID:17055430"} property_value: RO:0002331 GO:0016082 {evidence="IMP", xref="PMID:20562868"} property_value: RO:0002331 GO:0016082 {evidence="IDA", xref="PMID:25609709"} property_value: RO:0002432 GO:0030672 {evidence="IDA", xref="PMID:17055430"} @@ -211237,8 +211237,8 @@ property_value: RO:0002331 GO:0002285 {evidence="IMP", xref="PMID:23453632"} property_value: RO:0002331 GO:0002317 {evidence="IMP", xref="PMID:25124037"} property_value: RO:0002331 GO:0002456 {evidence="IMP", xref="PMID:31182790"} property_value: RO:0002331 GO:0002544 {evidence="IMP", xref="PMID:31853061"} -property_value: RO:0002331 GO:0006954 {evidence="IMP", xref="PMID:18441309"} property_value: RO:0002331 GO:0006954 {evidence="IMP", xref="PMID:31622280"} +property_value: RO:0002331 GO:0006954 {evidence="IMP", xref="PMID:18441309"} property_value: RO:0002331 GO:0006954 {evidence="IMP", xref="PMID:28740238"} property_value: RO:0002331 GO:0006954 {evidence="IMP", xref="PMID:26460049"} property_value: RO:0002331 GO:0006954 {evidence="IMP", xref="PMID:15491998"} @@ -212350,8 +212350,8 @@ property_value: RO:0002331 GO:0061760 {evidence="IMP", xref="PMID:26961233"} property_value: RO:0002331 GO:0061760 {evidence="IMP", xref="PMID:24231284"} property_value: RO:0002331 GO:0061760 {evidence="IMP", xref="PMID:33558980"} property_value: RO:0002331 GO:0061760 {evidence="IMP", xref="PMID:29080677"} -property_value: RO:0002331 GO:0061760 {evidence="IMP", xref="PMID:33548172"} property_value: RO:0002331 GO:0061760 {evidence="IDA", xref="PMID:26488816"} +property_value: RO:0002331 GO:0061760 {evidence="IMP", xref="PMID:33548172"} property_value: RO:0002331 GO:2000318 {evidence="IMP", xref="PMID:29080677"} property_value: RO:0002331 GO:2000318 {evidence="IMP", xref="PMID:24231284"} @@ -213063,8 +213063,8 @@ id: https://identifiers.org/uniprot:Q9H5U6 name: rRNA N(6)-adenosine-methyltransferase ZCCHC4 is_a: PR:000000001 property_value: IAO:0000028 "ZCCHC4" xsd:string -property_value: RO:0001025 GO:0005730 {evidence="IDA", xref="PMID:30531910"} property_value: RO:0001025 GO:0005730 {evidence="IDA", xref="PMID:31799605"} +property_value: RO:0001025 GO:0005730 {evidence="IDA", xref="PMID:30531910"} property_value: RO:0002162 NCBITaxon:9606 [Term] @@ -213126,8 +213126,8 @@ id: https://identifiers.org/uniprot:Q9H6E5 name: Speckle targeted PIP5K1A-regulated poly(A) polymerase is_a: PR:000000001 property_value: IAO:0000028 "TUT1" xsd:string -property_value: RO:0001025 GO:0005730 {evidence="IDA", xref="GO_REF:0000052"} property_value: RO:0001025 GO:0005730 {evidence="IDA", xref="PMID:16790842"} +property_value: RO:0001025 GO:0005730 {evidence="IDA", xref="GO_REF:0000052"} property_value: RO:0002162 NCBITaxon:9606 [Term] @@ -213556,9 +213556,9 @@ is_a: PR:000000001 property_value: IAO:0000028 "ECT2" xsd:string property_value: RO:0001025 GO:0030496 {evidence="IDA", xref="PMID:16103226"} property_value: RO:0001025 GO:0030496 {evidence="IDA", xref="PMID:19468300"} -property_value: RO:0001025 GO:0030496 {evidence="IDA", xref="PMID:20047078"} -property_value: RO:0001025 GO:0030496 {evidence="IDA", xref="PMID:15545273"} property_value: RO:0001025 GO:0030496 {evidence="IDA", xref="PMID:16394104"} +property_value: RO:0001025 GO:0030496 {evidence="IDA", xref="PMID:15545273"} +property_value: RO:0001025 GO:0030496 {evidence="IDA", xref="PMID:20047078"} property_value: RO:0001025 GO:0032154 {evidence="IDA", xref="PMID:16103226"} property_value: RO:0001025 GO:0032154 {evidence="IDA", xref="PMID:20047078"} property_value: RO:0002162 NCBITaxon:9606 @@ -214846,8 +214846,8 @@ property_value: RO:0001025 GO:0030017 {evidence="IDA", xref="PMID:16585392"} property_value: RO:0001025 GO:0030017 {evidence="IDA", xref="PMID:24840128"} property_value: RO:0001025 GO:0030018 {evidence="IDA", xref="PMID:29206857"} property_value: RO:0001025 GO:0030018 {evidence="IDA", xref="PMID:17360664"} -property_value: RO:0001025 GO:0030018 {evidence="IDA", xref="PMID:19815520"} property_value: RO:0001025 GO:0030018 {evidence="IDA", xref="PMID:16407236"} +property_value: RO:0001025 GO:0030018 {evidence="IDA", xref="PMID:19815520"} property_value: RO:0001025 GO:0030018 {evidence="IDA", xref="PMID:20368620"} property_value: RO:0001025 GO:0030018 {evidence="IDA", xref="PMID:20215401"} property_value: RO:0001025 GO:0030018 {evidence="IDA", xref="PMID:19932097"} @@ -215548,10 +215548,10 @@ name: Origin recognition complex subunit 3 is_a: PR:000000001 property_value: IAO:0000028 "Orc3" xsd:string property_value: RO:0002162 NCBITaxon:10090 -property_value: RO:0002264 GO:0014009 {evidence="IMP", xref="PMID:23349620"} property_value: RO:0002264 GO:0014009 {evidence="IMP", xref="PMID:21185282"} -property_value: RO:0002264 GO:0061351 {evidence="IMP", xref="PMID:21185282"} +property_value: RO:0002264 GO:0014009 {evidence="IMP", xref="PMID:23349620"} property_value: RO:0002264 GO:0061351 {evidence="IMP", xref="PMID:23349620"} +property_value: RO:0002264 GO:0061351 {evidence="IMP", xref="PMID:21185282"} [Term] id: https://identifiers.org/uniprot:Q9JK37 @@ -215794,8 +215794,8 @@ id: https://identifiers.org/uniprot:Q9JKK1 name: Syntaxin-6 is_a: PR:000000001 property_value: IAO:0000028 "Stx6" xsd:string -property_value: RO:0001025 GO:0005794 {evidence="IDA", xref="PMID:14622145"} property_value: RO:0001025 GO:0005794 {evidence="IDA", xref="PMID:15800058"} +property_value: RO:0001025 GO:0005794 {evidence="IDA", xref="PMID:14622145"} property_value: RO:0001025 GO:0005794 {evidence="IDA", xref="PMID:22783020"} property_value: RO:0001025 GO:0005794 {evidence="IDA", xref="PMID:23485813"} property_value: RO:0001025 GO:0005802 {evidence="IDA", xref="PMID:17003038"} @@ -217490,8 +217490,8 @@ is_a: PR:000000001 property_value: IAO:0000028 "TLR8" xsd:string property_value: RO:0001025 GO:0009897 {evidence="IDA", xref="PMID:24942581"} property_value: RO:0002162 NCBITaxon:9606 -property_value: RO:0002331 GO:0034158 {evidence="IDA", xref="PMID:24942581"} property_value: RO:0002331 GO:0034158 {evidence="IDA", xref="PMID:12032557"} +property_value: RO:0002331 GO:0034158 {evidence="IDA", xref="PMID:24942581"} property_value: RO:0002331 GO:0034158 {evidence="IDA", xref="PMID:33718825"} property_value: RO:0002331 GO:0045089 {evidence="IDA", xref="PMID:16123302"} @@ -217883,8 +217883,8 @@ id: https://identifiers.org/uniprot:Q9NSK7 name: Protein C19orf12 is_a: PR:000000001 property_value: IAO:0000028 "C19orf12" xsd:string -property_value: RO:0001025 GO:0005783 {evidence="IDA", xref="PMID:26136767"} property_value: RO:0001025 GO:0005783 {evidence="IDA", xref="PMID:23857908"} +property_value: RO:0001025 GO:0005783 {evidence="IDA", xref="PMID:26136767"} property_value: RO:0002162 NCBITaxon:9606 property_value: RO:0002331 GO:0051560 {evidence="IMP", xref="PMID:26136767"} @@ -217953,8 +217953,8 @@ is_a: PR:000000001 property_value: IAO:0000028 "SACM1L" xsd:string property_value: RO:0001025 GO:0000139 {evidence="IDA", xref="PMID:29461204"} property_value: RO:0001025 GO:0005789 {evidence="IDA", xref="PMID:27044890"} -property_value: RO:0001025 GO:0005789 {evidence="IDA", xref="PMID:31806350"} property_value: RO:0001025 GO:0005789 {evidence="IDA", xref="PMID:29461204"} +property_value: RO:0001025 GO:0005789 {evidence="IDA", xref="PMID:31806350"} property_value: RO:0001025 GO:0005794 {evidence="IDA", xref="GO_REF:0000054"} property_value: RO:0001025 GO:0005794 {evidence="IDA", xref="PMID:31806350"} property_value: RO:0002162 NCBITaxon:9606 @@ -219326,8 +219326,8 @@ property_value: RO:0001025 GO:0005730 {evidence="IDA", xref="PMID:27829214"} property_value: RO:0001025 GO:0005730 {evidence="IDA", xref="PMID:22522597"} property_value: RO:0001025 GO:0005730 {evidence="IDA", xref="PMID:24923447"} property_value: RO:0001025 GO:0005730 {evidence="IDA", xref="PMID:25956029"} -property_value: RO:0001025 GO:0005730 {evidence="IDA", xref="PMID:27323397"} property_value: RO:0001025 GO:0005730 {evidence="IDA", xref="PMID:20042497"} +property_value: RO:0001025 GO:0005730 {evidence="IDA", xref="PMID:27323397"} property_value: RO:0001025 GO:0005730 {evidence="IDA", xref="GO_REF:0000052"} property_value: RO:0002162 NCBITaxon:9606 property_value: RO:0002325 GO:0033553 {evidence="IDA", xref="PMID:27729611"} @@ -219545,8 +219545,8 @@ property_value: RO:0001025 GO:0005783 {evidence="HDA", xref="PMID:16791210"} property_value: RO:0001025 GO:0005783 {evidence="IDA", xref="GO_REF:0000052"} property_value: RO:0001025 GO:0005783 {evidence="IDA", xref="PMID:18713837"} property_value: RO:0001025 GO:0005789 {evidence="IDA", xref="PMID:33124732"} -property_value: RO:0001025 GO:0005789 {evidence="IDA", xref="PMID:30741634"} property_value: RO:0001025 GO:0005789 {evidence="IDA", xref="PMID:32344433"} +property_value: RO:0001025 GO:0005789 {evidence="IDA", xref="PMID:30741634"} property_value: RO:0002162 NCBITaxon:9606 property_value: RO:0002331 GO:0006888 {evidence="IMP", xref="PMID:18713837"} property_value: RO:0002331 GO:0031175 {evidence="IMP", xref="PMID:19289470"} @@ -219678,8 +219678,8 @@ name: Calmodulin-regulated spectrin-associated protein 3 is_a: PR:000000001 property_value: IAO:0000028 "CAMSAP3" xsd:string property_value: RO:0002162 NCBITaxon:9606 -property_value: RO:0002331 GO:0045198 {evidence="IDA", xref="PMID:26715742"} property_value: RO:0002331 GO:0045198 {evidence="IDA", xref="PMID:27802168"} +property_value: RO:0002331 GO:0045198 {evidence="IDA", xref="PMID:26715742"} [Term] id: https://identifiers.org/uniprot:Q9P209 @@ -219813,8 +219813,8 @@ name: Serine/threonine-protein kinase 26 is_a: PR:000000001 property_value: IAO:0000028 "STK26" xsd:string property_value: RO:0001025 GO:0005794 {evidence="IDA", xref="PMID:15037601"} -property_value: RO:0001025 GO:0005794 {evidence="IDA", xref="PMID:22291017"} property_value: RO:0001025 GO:0005794 {evidence="IDA", xref="PMID:27807006"} +property_value: RO:0001025 GO:0005794 {evidence="IDA", xref="PMID:22291017"} property_value: RO:0001025 GO:0016324 {evidence="IDA", xref="PMID:22797597"} property_value: RO:0002162 NCBITaxon:9606 @@ -220666,8 +220666,8 @@ property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37865089"} property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37989994"} property_value: RO:0002432 GO:0036126 {evidence="IDA", xref="PMID:37295417"} property_value: RO:0002432 GO:0160111 {evidence="IDA", xref="PMID:37295417"} -property_value: RO:0002432 GO:0160111 {evidence="IDA", xref="PMID:37865089"} property_value: RO:0002432 GO:0160111 {evidence="IDA", xref="PMID:37989994"} +property_value: RO:0002432 GO:0160111 {evidence="IDA", xref="PMID:37865089"} [Term] id: https://identifiers.org/uniprot:Q9QXM0 @@ -220977,14 +220977,14 @@ is_a: PR:000000001 property_value: IAO:0000028 "Zbp1" xsd:string property_value: RO:0002162 NCBITaxon:10090 property_value: RO:0002264 GO:0060340 {evidence="IMP", xref="PMID:17618271"} -property_value: RO:0002331 GO:0002218 {evidence="IMP", xref="PMID:33109609"} property_value: RO:0002331 GO:0002218 {evidence="IDA", xref="PMID:32296175"} +property_value: RO:0002331 GO:0002218 {evidence="IMP", xref="PMID:33109609"} property_value: RO:0002331 GO:0002218 {evidence="IMP", xref="PMID:32350114"} property_value: RO:0002331 GO:0002218 {evidence="IDA", xref="PMID:32200799"} property_value: RO:0002331 GO:0050729 {evidence="IMP", xref="PMID:27819681"} property_value: RO:0002331 GO:0070269 {evidence="IMP", xref="PMID:27917412"} -property_value: RO:0002331 GO:0070269 {evidence="IMP", xref="PMID:32350114"} property_value: RO:0002331 GO:0070269 {evidence="IMP", xref="PMID:33109609"} +property_value: RO:0002331 GO:0070269 {evidence="IMP", xref="PMID:32350114"} [Term] id: https://identifiers.org/uniprot:Q9QY30 @@ -222065,8 +222065,8 @@ property_value: IAO:0000028 "Syt11" xsd:string property_value: RO:0001025 GO:0005802 {evidence="IDA", xref="PMID:28686317"} property_value: RO:0001025 GO:0014069 {evidence="IDA", xref="PMID:30808661"} property_value: RO:0001025 GO:0030425 {evidence="IDA", xref="PMID:30808661"} -property_value: RO:0001025 GO:0055037 {evidence="IDA", xref="PMID:23303671"} property_value: RO:0001025 GO:0055037 {evidence="IDA", xref="PMID:28686317"} +property_value: RO:0001025 GO:0055037 {evidence="IDA", xref="PMID:23303671"} property_value: RO:0002162 NCBITaxon:10090 property_value: RO:0002331 GO:0051650 {evidence="IMP", xref="PMID:30808661"} property_value: RO:0002331 GO:1903979 {evidence="IDA", xref="PMID:28686317"} @@ -222375,8 +222375,8 @@ property_value: IAO:0000028 "Slc26a4" xsd:string property_value: RO:0001025 GO:0016324 {evidence="IDA", xref="PMID:12388412"} property_value: RO:0001025 GO:0016324 {evidence="IDA", xref="PMID:15385584"} property_value: RO:0001025 GO:0016324 {evidence="IDA", xref="PMID:35601831"} -property_value: RO:0001025 GO:0016324 {evidence="IDA", xref="PMID:16144965"} property_value: RO:0001025 GO:0016324 {evidence="IDA", xref="PMID:18565999"} +property_value: RO:0001025 GO:0016324 {evidence="IDA", xref="PMID:16144965"} property_value: RO:0001025 GO:0016324 {evidence="IDA", xref="PMID:11274445"} property_value: RO:0001025 GO:0016324 {evidence="IDA", xref="PMID:11459928"} property_value: RO:0001025 GO:0031526 {evidence="IDA", xref="PMID:11459928"} @@ -222542,8 +222542,8 @@ property_value: IAO:0000028 "Cetn2" xsd:string property_value: RO:0001025 GO:0005929 {evidence="IDA", xref="PMID:20081859"} property_value: RO:0001025 GO:0032391 {evidence="IDA", xref="PMID:15347651"} property_value: RO:0001025 GO:0036064 {evidence="IDA", xref="PMID:20081859"} -property_value: RO:0001025 GO:0036064 {evidence="IDA", xref="PMID:15347651"} property_value: RO:0001025 GO:0036064 {evidence="IDA", xref="PMID:29891944"} +property_value: RO:0001025 GO:0036064 {evidence="IDA", xref="PMID:15347651"} property_value: RO:0001025 GO:0045177 {evidence="IDA", xref="PMID:29891944"} property_value: RO:0001025 GO:0097386 {evidence="IDA", xref="PMID:29891944"} property_value: RO:0001025 GO:0097729 {evidence="IDA", xref="PMID:29891944"} @@ -223264,8 +223264,8 @@ id: https://identifiers.org/uniprot:Q9UEU0 name: Vesicle transport through interaction with t-SNAREs homolog 1B is_a: PR:000000001 property_value: IAO:0000028 "VTI1B" xsd:string -property_value: RO:0001025 GO:0005794 {evidence="IDA", xref="GO_REF:0000052"} property_value: RO:0001025 GO:0005794 {evidence="IDA", xref="PMID:19224922"} +property_value: RO:0001025 GO:0005794 {evidence="IDA", xref="GO_REF:0000052"} property_value: RO:0001025 GO:0031901 {evidence="IDA", xref="PMID:18033301"} property_value: RO:0001025 GO:0031902 {evidence="IDA", xref="PMID:18033301"} property_value: RO:0001025 GO:0031902 {evidence="IDA", xref="PMID:23217709"} @@ -224572,8 +224572,8 @@ id: https://identifiers.org/uniprot:Q9ULQ1 name: Two pore channel protein 1 is_a: PR:000000001 property_value: IAO:0000028 "TPCN1" xsd:string -property_value: RO:0001025 GO:0010008 {evidence="IDA", xref="PMID:19620632"} property_value: RO:0001025 GO:0010008 {evidence="IDA", xref="PMID:23063126"} +property_value: RO:0001025 GO:0010008 {evidence="IDA", xref="PMID:19620632"} property_value: RO:0001025 GO:0036019 {evidence="IDA", xref="PMID:24776928"} property_value: RO:0002162 NCBITaxon:9606 @@ -225464,8 +225464,8 @@ id: https://identifiers.org/uniprot:Q9WTI7 name: Unconventional myosin-Ic is_a: PR:000000001 property_value: IAO:0000028 "Myo1c" xsd:string -property_value: RO:0001025 GO:0005903 {evidence="IDA", xref="PMID:22114352"} property_value: RO:0001025 GO:0005903 {evidence="IDA", xref="PMID:15758024"} +property_value: RO:0001025 GO:0005903 {evidence="IDA", xref="PMID:22114352"} property_value: RO:0001025 GO:0005903 {evidence="IDA", xref="PMID:20089841"} property_value: RO:0001025 GO:0032420 {evidence="IDA", xref="PMID:17050716"} property_value: RO:0002162 NCBITaxon:10090 @@ -227289,8 +227289,8 @@ is_a: PR:000000001 property_value: IAO:0000028 "CARD8" xsd:string property_value: RO:0002162 NCBITaxon:9606 property_value: RO:0002331 GO:0140374 {evidence="IDA", xref="PMID:33542150"} -property_value: RO:0002331 GO:0140633 {evidence="IDA", xref="PMID:31525884"} property_value: RO:0002331 GO:0140633 {evidence="IDA", xref="PMID:33053349"} +property_value: RO:0002331 GO:0140633 {evidence="IDA", xref="PMID:31525884"} property_value: RO:0002331 GO:0140633 {evidence="IDA", xref="PMID:33420033"} property_value: RO:0002331 GO:1900226 {evidence="IDA", xref="PMID:24517500"} @@ -227358,8 +227358,8 @@ property_value: RO:0001025 GO:0031901 {evidence="IDA", xref="PMID:16448788"} property_value: RO:0002162 NCBITaxon:9606 property_value: RO:0002331 GO:0019886 {evidence="IDA", xref="PMID:30612035"} property_value: RO:0002331 GO:0030593 {evidence="IDA", xref="PMID:28779020"} -property_value: RO:0002331 GO:0042147 {evidence="IMP", xref="PMID:14551253"} property_value: RO:0002331 GO:0042147 {evidence="IMP", xref="PMID:16954148"} +property_value: RO:0002331 GO:0042147 {evidence="IMP", xref="PMID:14551253"} property_value: RO:0002331 GO:0090385 {evidence="IDA", xref="PMID:28779020"} [Term] @@ -227678,8 +227678,8 @@ id: https://identifiers.org/uniprot:Q9Y3A5 name: Ribosome maturation protein SBDS is_a: PR:000000001 property_value: IAO:0000028 "SBDS" xsd:string -property_value: RO:0001025 GO:0005730 {evidence="IDA", xref="PMID:15860664"} property_value: RO:0001025 GO:0005730 {evidence="IDA", xref="PMID:17475909"} +property_value: RO:0001025 GO:0005730 {evidence="IDA", xref="PMID:15860664"} property_value: RO:0002162 NCBITaxon:9606 property_value: RO:0002331 GO:0002244 {evidence="IMP", xref="PMID:19759903"} property_value: RO:0002331 GO:0007052 {evidence="IDA", xref="PMID:18324336"} @@ -227906,8 +227906,8 @@ id: https://identifiers.org/uniprot:Q9Y3U8 name: Large ribosomal subunit protein eL36 is_a: PR:000000001 property_value: BFO:0000050 GO:0022625 {evidence="HDA", xref="PMID:12962325"} -property_value: BFO:0000050 GO:0022625 {evidence="IDA", xref="PMID:32669547"} property_value: BFO:0000050 GO:0022625 {evidence="IDA", xref="PMID:25957688"} +property_value: BFO:0000050 GO:0022625 {evidence="IDA", xref="PMID:32669547"} property_value: BFO:0000050 GO:0022625 {evidence="IPI", xref="PMID:25901680"} property_value: BFO:0000050 GO:0022626 {evidence="IDA", xref="PMID:23636399"} property_value: IAO:0000028 "RPL36" xsd:string @@ -228901,8 +228901,8 @@ property_value: RO:0002162 NCBITaxon:9606 id: https://identifiers.org/uniprot:Q9Y6C2 name: EMILIN-1 is_a: PR:000000001 -property_value: BFO:0000050 GO:1990971 {evidence="IMP", xref="PMID:18463100"} property_value: BFO:0000050 GO:1990971 {evidence="IPI", xref="PMID:10821830"} +property_value: BFO:0000050 GO:1990971 {evidence="IMP", xref="PMID:18463100"} property_value: IAO:0000028 "EMILIN1" xsd:string property_value: RO:0001025 GO:0062023 {evidence="HDA", xref="PMID:25037231"} property_value: RO:0001025 GO:0062023 {evidence="IMP", xref="PMID:26462740"} @@ -229202,8 +229202,8 @@ property_value: RO:0002327 GO:0008510 {evidence="IMP", xref="PMID:29500354"} property_value: RO:0002327 GO:0008510 {evidence="IMP", xref="PMID:15930088"} property_value: RO:0002327 GO:0008510 {evidence="IDA", xref="PMID:9651366"} property_value: RO:0002327 GO:0008510 {evidence="IDA", xref="PMID:23324180"} -property_value: RO:0002327 GO:0008510 {evidence="IDA", xref="PMID:12411514"} property_value: RO:0002327 GO:0008510 {evidence="IDA", xref="PMID:12730338"} +property_value: RO:0002327 GO:0008510 {evidence="IDA", xref="PMID:12411514"} property_value: RO:0002327 GO:0008510 {evidence="IDA", xref="PMID:10069984"} property_value: RO:0002327 GO:0008510 {evidence="IDA", xref="PMID:11744745"} property_value: RO:0002327 GO:0008510 {evidence="IMP", xref="PMID:16636648"} @@ -229376,12 +229376,12 @@ property_value: RO:0002331 GO:0002218 {evidence="IMP", xref="PMID:24739961"} property_value: RO:0002331 GO:0042742 {evidence="IDA", xref="PMID:25774715"} property_value: RO:0002331 GO:0042742 {evidence="IDA", xref="PMID:27693356"} property_value: RO:0002331 GO:0042742 {evidence="IMP", xref="PMID:24739961"} -property_value: RO:0002331 GO:0042742 {evidence="IDA", xref="PMID:30062052"} property_value: RO:0002331 GO:0042742 {evidence="IMP", xref="PMID:24715728"} +property_value: RO:0002331 GO:0042742 {evidence="IDA", xref="PMID:30062052"} property_value: RO:0002331 GO:0140639 {evidence="IDA", xref="PMID:25774715"} property_value: RO:0002331 GO:0140639 {evidence="IDA", xref="PMID:25774716"} -property_value: RO:0002331 GO:0140639 {evidence="IDA", xref="PMID:30062052"} property_value: RO:0002331 GO:0140639 {evidence="IMP", xref="PMID:24715728"} +property_value: RO:0002331 GO:0140639 {evidence="IDA", xref="PMID:30062052"} property_value: RO:0002331 GO:0140973 {evidence="IDA", xref="PMID:25774715"} property_value: RO:0002331 GO:0140973 {evidence="IDA", xref="PMID:25774716"} @@ -229600,8 +229600,8 @@ property_value: RO:0002162 NCBITaxon:10090 property_value: RO:0002264 GO:0051932 {evidence="IMP", xref="PMID:27488640"} property_value: RO:0002264 GO:0060326 {evidence="IMP", xref="PMID:20376365"} property_value: RO:0002264 GO:0090497 {evidence="IMP", xref="PMID:17507657"} -property_value: RO:0002264 GO:0140059 {evidence="IMP", xref="PMID:27488640"} property_value: RO:0002264 GO:0140059 {evidence="IMP", xref="PMID:22323733"} +property_value: RO:0002264 GO:0140059 {evidence="IMP", xref="PMID:27488640"} [Term] id: https://identifiers.org/uniprot:Q9Z0L1 @@ -230637,8 +230637,8 @@ property_value: RO:0001025 GO:0001917 {evidence="IDA", xref="PMID:11481257"} property_value: RO:0001025 GO:0001917 {evidence="IDA", xref="PMID:19218615"} property_value: RO:0001025 GO:0043679 {evidence="IDA", xref="PMID:11481257"} property_value: RO:0002162 NCBITaxon:10090 -property_value: RO:0002264 GO:0006910 {evidence="IMP", xref="PMID:19837063"} property_value: RO:0002264 GO:0006910 {evidence="IDA", xref="PMID:20978472"} +property_value: RO:0002264 GO:0006910 {evidence="IMP", xref="PMID:19837063"} property_value: RO:0002331 GO:0016358 {evidence="IMP", xref="PMID:19218615"} property_value: RO:0002331 GO:0042462 {evidence="IMP", xref="PMID:19218615"} @@ -230969,8 +230969,8 @@ id: https://identifiers.org/uniprot:Q9Z2I2 name: Peptidyl-prolyl cis-trans isomerase FKBP1B is_a: PR:000000001 property_value: IAO:0000028 "Fkbp1b" xsd:string -property_value: RO:0001025 GO:0016529 {evidence="IDA", xref="PMID:19578067"} property_value: RO:0001025 GO:0016529 {evidence="IDA", xref="PMID:21788490"} +property_value: RO:0001025 GO:0016529 {evidence="IDA", xref="PMID:19578067"} property_value: RO:0001025 GO:0033017 {evidence="IDA", xref="PMID:14592808"} property_value: RO:0001025 GO:0033017 {evidence="IDA", xref="PMID:16481613"} property_value: RO:0002162 NCBITaxon:10090 @@ -232129,8 +232129,8 @@ name: NACHT, LRR and PYD domains-containing protein 1b allele 1 is_a: PR:000000001 property_value: IAO:0000028 "Nlrp1b" xsd:string property_value: RO:0002162 NCBITaxon:10090 -property_value: RO:0002331 GO:0070269 {evidence="IDA", xref="PMID:30872531"} property_value: RO:0002331 GO:0070269 {evidence="IDA", xref="PMID:31268597"} +property_value: RO:0002331 GO:0070269 {evidence="IDA", xref="PMID:30872531"} property_value: RO:0002331 GO:0070269 {evidence="IDA", xref="PMID:30872533"} [Term] diff --git a/clm-kg.owl b/clm-kg.owl index 786c341..27d48e7 100644 --- a/clm-kg.owl +++ b/clm-kg.owl @@ -12,12 +12,12 @@ xmlns:dcterms="http://purl.org/dc/terms/" xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#"> - + None Cell Markers Ontology - 2024-12-02 + 2024-12-12 @@ -801496,86 +801496,31 @@ - + - - - - A Chandelier_1 in the Human Brain has the gene markers CA8, GPR149 with a NS-Forest FBeta value of 0.7997481108312343s. - Chandelier_1 - - - - - - - - - - A Sst Chodl in the Human Brain has the gene markers NPY with a NS-Forest FBeta value of 0.894026187s. - Sst Chodl - - - - - - - - - - A L6b_6 in the Human Brain has the gene markers PCOLCE2, FAM160A1, SULF1 with a NS-Forest FBeta value of 0.570388349514563s. - L6b_6 - - - - - - - - - - A Sncg_3 in the Human Brain has the gene markers SEMA3C, MYO1B, VAV3 with a NS-Forest FBeta value of 0.4528985507246377s. - Sncg_3 - - - - - - - - - - A Astro_2 in the Human Brain has the gene markers LINC01411, OBI1-AS1 with a NS-Forest FBeta value of 0.5566801619433198s. - Astro_2 - - - - - - - - + + - A CD8 T cells in the Human Lung has the gene markers CCL5, CD3D with a NS-Forest FBeta value of 0.76s. - CD8 T cells + A L5 ET in the Human Brain has the gene markers CHST8, POU3F1 with a NS-Forest FBeta value of 0.815891473s. + L5 ET - + - - + + - A Lamp5_6 in the Human Brain has the gene markers NDNF, KIT, TRPC3 with a NS-Forest FBeta value of 0.6357493857493858s. - Lamp5_6 + A L5/6 NP_6 in the Human Brain has the gene markers NPSR1-AS1, ARHGAP42 with a NS-Forest FBeta value of 0.7685614849187936s. + L5/6 NP_6 - + - + A Vip_21 in the Human Brain has the gene markers ALDH1A2, ROR2 with a NS-Forest FBeta value of 0.6180811808118081s. @@ -801584,273 +801529,229 @@ - - - - - - A Sst_11 in the Human Brain has the gene markers ADGRG6, PROM1, SYT9 with a NS-Forest FBeta value of 0.34898477157360397s. - Sst_11 - - - - - - - - - - A Alveolar Mph proliferating in the Human Lung has the gene markers PCLAF, RRM2, UBE2C, NUSAP1 with a NS-Forest FBeta value of 0.26s. - Alveolar Mph proliferating - - - - - + - - - - A Vip_20 in the Human Brain has the gene markers CBLN1, VIPR2, PPP1R1C, VIP with a NS-Forest FBeta value of 0.3658536585365853s. - Vip_20 - - - - - - - - - - A Sst_17 in the Human Brain has the gene markers PROM1, EYA2, PLCH1 with a NS-Forest FBeta value of 0.40226063829787234s. - Sst_17 - - - - - - - - + + - A Sst_28 in the Human Brain has the gene markers PROM1, NDST4, TRPC6 with a NS-Forest FBeta value of 0.5884615384615385s. - Sst_28 + A Pvalb in the Human Brain has the gene markers PVALB, TAC1, MYO5B with a NS-Forest FBeta value of 0.691998764s. + Pvalb - + - - + + - A Vip_25 in the Human Brain has the gene markers NOX4, IQGAP2, CBLN4 with a NS-Forest FBeta value of 0.5275229357798166s. - Vip_25 + A Vip_17 in the Human Brain has the gene markers PENK, PARD3B with a NS-Forest FBeta value of 0.6040502793296089s. + Vip_17 - + - - + + - A Pax6_4 in the Human Brain has the gene markers PALMD, RELN with a NS-Forest FBeta value of 0.8731422505307855s. - Pax6_4 + A Sst_10 in the Human Brain has the gene markers HPSE2, EYA4, SST, PLCH1 with a NS-Forest FBeta value of 0.3615384615384615s. + Sst_10 - + - - + + - A Goblet (nasal) in the Human Lung has the gene markers LYPD2, MUC5AC with a NS-Forest FBeta value of 0.81s. - Goblet (nasal) + A L5/6 NP in the Human Brain has the gene markers NPSR1-AS1, TLL1 with a NS-Forest FBeta value of 0.899288218s. + L5/6 NP - + - - + + - A Astro_3 in the Human Brain has the gene markers HEPN1, F3, AGT, GJA1, AQP4 with a NS-Forest FBeta value of 0.5711722488038278s. - Astro_3 + A Vip_17 in the Human Brain has the gene markers PENK, PARD3B with a NS-Forest FBeta value of 0.6040502793296089s. + Vip_17 - + - - + + - A Multiciliated (non-nasal) in the Human Lung has the gene markers C1orf194, MS4A8 with a NS-Forest FBeta value of 0.86s. - Multiciliated (non-nasal) + A Chandelier_1 in the Human Brain has the gene markers CA8, GPR149 with a NS-Forest FBeta value of 0.7997481108312343s. + Chandelier_1 - + - - + + - A Sst_27 in the Human Brain has the gene markers EDNRA, MT-ND5, FREM1, SST with a NS-Forest FBeta value of 0.39168937329700276s. - Sst_27 + A Vip_19 in the Human Brain has the gene markers CBLN1, HTR2C, VIP with a NS-Forest FBeta value of 0.5353075170842825s. + Vip_19 - + - - + + - A Vip_19 in the Human Brain has the gene markers CBLN1, HTR2C, VIP with a NS-Forest FBeta value of 0.5353075170842825s. - Vip_19 + A L6b_2 in the Human Brain has the gene markers NPFFR2, ROS1 with a NS-Forest FBeta value of 0.565711462450593s. + L6b_2 - + - - + + - A Chandelier in the Human Brain has the gene markers GPR149, CA8 with a NS-Forest FBeta value of 0.799748111s. - Chandelier + A Sst_13 in the Human Brain has the gene markers FBN2, TRPC6, EPB41L4A with a NS-Forest FBeta value of 0.5461876832844575s. + Sst_13 - + - - + + - A Subpleural fibroblasts in the Human Lung has the gene markers WT1, CXCL12 with a NS-Forest FBeta value of 0.60s. - Subpleural fibroblasts + A Vip_26 in the Human Brain has the gene markers SEMA3C, LINC01630, HPSE2, TAC3 with a NS-Forest FBeta value of 0.5947955390334573s. + Vip_26 - + - - + + - A Sncg_8 in the Human Brain has the gene markers NDST4, HTR2C, PRELID2 with a NS-Forest FBeta value of 0.49476135040745045s. - Sncg_8 + A Micro/PVM in the Human Brain has the gene markers APBB1IP, DOCK8 with a NS-Forest FBeta value of 0.955105634s. + Micro/PVM - + - - + + - A Mast cells in the Human Lung has the gene markers TPSAB1 with a NS-Forest FBeta value of 0.96s. - Mast cells + A L2/3 IT_2 in the Human Brain has the gene markers THSD4, TESPA1, TRPC3 with a NS-Forest FBeta value of 0.6621140142517815s. + L2/3 IT_2 - + - - + + - A Vip_8 in the Human Brain has the gene markers VWDE, WSCD1, DACH2 with a NS-Forest FBeta value of 0.3183962264150943s. - Vip_8 + A L5 IT in the Human Brain has the gene markers ARSJ, RORB, KCNK2 with a NS-Forest FBeta value of 0.764261336s. + L5 IT - + - - + + - A Pax6_3 in the Human Brain has the gene markers PBX3, PDLIM5, FBN2 with a NS-Forest FBeta value of 0.7090163934426228s. - Pax6_3 + A Sst_23 in the Human Brain has the gene markers NIBAN1, PROM1, THSD7B with a NS-Forest FBeta value of 0.6134686346863469s. + Sst_23 - + - - + + - A Sst_10 in the Human Brain has the gene markers HPSE2, EYA4, SST, PLCH1 with a NS-Forest FBeta value of 0.3615384615384615s. - Sst_10 + A L6b_5 in the Human Brain has the gene markers NXPH4, NR4A2, SEMA3E with a NS-Forest FBeta value of 0.5693519079345852s. + L6b_5 - + - - + + - A Vip_2 in the Human Brain has the gene markers IGFBP5, SLC22A3, PTGDS, VIP with a NS-Forest FBeta value of 0.4741379310344827s. - Vip_2 + A L5 ET_1 in the Human Brain has the gene markers LINC00922, POU3F1 with a NS-Forest FBeta value of 0.728891820580475s. + L5 ET_1 - + - - + + - A Lamp5_4 in the Human Brain has the gene markers ROR2, TRPC3, FBXL7, LINC00298 with a NS-Forest FBeta value of 0.40425531914893614s. - Lamp5_4 + A Sst_6 in the Human Brain has the gene markers DPP4, MAFB with a NS-Forest FBeta value of 0.38520801232665647s. + Sst_6 - + - - + + - A AT2 proliferating in the Human Lung has the gene markers PEG10, PRC1, TOP2A with a NS-Forest FBeta value of 0.61s. - AT2 proliferating + A Vip_1 in the Human Brain has the gene markers FLT1, LRRC1, SHISA8 with a NS-Forest FBeta value of 0.400763358778626s. + Vip_1 - + - - + + - A Vip_12 in the Human Brain has the gene markers SLC7A11, HCRTR2, EPS8 with a NS-Forest FBeta value of 0.5889057750759878s. - Vip_12 + A Vip_5 in the Human Brain has the gene markers LINC01630, IQGAP2, THSD4 with a NS-Forest FBeta value of 0.4801324503311257s. + Vip_5 - + - - + + - A Sncg_4 in the Human Brain has the gene markers LINC01539, DCN, THSD7B with a NS-Forest FBeta value of 0.6752411575562701s. - Sncg_4 + A Pvalb_1 in the Human Brain has the gene markers MYBPC1, GPR149, SVIL with a NS-Forest FBeta value of 0.6944444444444444s. + Pvalb_1 - + - + A Sncg_7 in the Human Brain has the gene markers HTR3A, SYT9, MCTP2 with a NS-Forest FBeta value of 0.7097791798107256s. @@ -801859,306 +801760,306 @@ - + - - + + - A Pax6 in the Human Brain has the gene markers RELN, HCRTR2 with a NS-Forest FBeta value of 0.724125093s. - Pax6 + A Sst_35 in the Human Brain has the gene markers ACVR1C, EYA2, TRIM67 with a NS-Forest FBeta value of 0.5226480836236933s. + Sst_35 - + - - + + - A Pvalb_8 in the Human Brain has the gene markers CA8, FGFR2, TAC1 with a NS-Forest FBeta value of 0.5676733780760627s. - Pvalb_8 + A L6b in the Human Brain has the gene markers CCN2, ROS1 with a NS-Forest FBeta value of 0.819940964s. + L6b - + - - + + - A Sst_29 in the Human Brain has the gene markers ENPP1, QRFPR, PIEZO2 with a NS-Forest FBeta value of 0.41353383458646614s. - Sst_29 + A Vip_24 in the Human Brain has the gene markers LYPD1, ENHO, CHRNA2 with a NS-Forest FBeta value of 0.36276223776223776s. + Vip_24 - + - - + + - A Lymphatic EC proliferating in the Human Lung has the gene markers CENPF, CCL21 with a NS-Forest FBeta value of 0.73s. - Lymphatic EC proliferating + A Lamp5 Lhx6_1 in the Human Brain has the gene markers CHST9, LAMP5 with a NS-Forest FBeta value of 0.8216783216783217s. + Lamp5 Lhx6_1 - + - - + + - A Vip_18 in the Human Brain has the gene markers NOX4, RXRG, NDST4 with a NS-Forest FBeta value of 0.38953488372093026s. - Vip_18 + A Sst_19 in the Human Brain has the gene markers EPB41L4A, GPC5, PLCH1 with a NS-Forest FBeta value of 0.7339449541284404s. + Sst_19 - + - - + + - A Sst_7 in the Human Brain has the gene markers EPSTI1, PIEZO2, HPSE2, PLCH1 with a NS-Forest FBeta value of 0.4469696969696969s. - Sst_7 + A L4 IT_1 in the Human Brain has the gene markers TPBG, RP11-197K6.1, ST8SIA4 with a NS-Forest FBeta value of 0.6129032258064517s. + L4 IT_1 - + - - + + - A Vip_14 in the Human Brain has the gene markers ST18, KCNH8, CA10, VIP with a NS-Forest FBeta value of 0.5968468468468467s. - Vip_14 + A Pax6_4 in the Human Brain has the gene markers PALMD, RELN with a NS-Forest FBeta value of 0.8731422505307855s. + Pax6_4 - + - - + + - A OPC in the Human Brain has the gene markers FERMT1 with a NS-Forest FBeta value of 0.741071429s. - OPC + A L6b_1 in the Human Brain has the gene markers SEMA3D, ITGA11, FAM160A1 with a NS-Forest FBeta value of 0.5724637681159421s. + L6b_1 - + - - + + - A Sncg in the Human Brain has the gene markers RXRG, THSD7B with a NS-Forest FBeta value of 0.628943702s. - Sncg + A Vip_28 in the Human Brain has the gene markers HTR2C, DCN with a NS-Forest FBeta value of 0.3763440860215054s. + Vip_28 - + - - + + - A Lamp5 Lhx6_1 in the Human Brain has the gene markers CHST9, LAMP5 with a NS-Forest FBeta value of 0.8216783216783217s. - Lamp5 Lhx6_1 + A Lamp5_2 in the Human Brain has the gene markers PBX3, KIT with a NS-Forest FBeta value of 0.7316272965879266s. + Lamp5_2 - + - - + + - A Vip_26 in the Human Brain has the gene markers SEMA3C, LINC01630, HPSE2, TAC3 with a NS-Forest FBeta value of 0.5947955390334573s. - Vip_26 + A L5 IT_1 in the Human Brain has the gene markers CHST2, TLL1, RORB with a NS-Forest FBeta value of 0.6250000000000001s. + L5 IT_1 - + - - + + - A L5/6 NP_4 in the Human Brain has the gene markers FSHR, CLMN, TLL1 with a NS-Forest FBeta value of 0.740632318501171s. - L5/6 NP_4 + A Vip_10 in the Human Brain has the gene markers ABI3BP, KCNG2, PARD3B with a NS-Forest FBeta value of 0.5405405405405405s. + Vip_10 - + - - + + - A L5 ET in the Human Brain has the gene markers CHST8, POU3F1 with a NS-Forest FBeta value of 0.815891473s. - L5 ET + A Endo_2 in the Human Brain has the gene markers HERC2P3, PRKCH with a NS-Forest FBeta value of 0.8270877944325483s. + Endo_2 - + - - + + - A L5 ET_2 in the Human Brain has the gene markers ATP6V1C2, LRP2, ST8SIA2 with a NS-Forest FBeta value of 0.7593749999999999s. - L5 ET_2 + A Sst_17 in the Human Brain has the gene markers PROM1, EYA2, PLCH1 with a NS-Forest FBeta value of 0.40226063829787234s. + Sst_17 - + - - + + - A Sst_19 in the Human Brain has the gene markers EPB41L4A, GPC5, PLCH1 with a NS-Forest FBeta value of 0.7339449541284404s. - Sst_19 + A Astro_3 in the Human Brain has the gene markers HEPN1, F3, AGT, GJA1, AQP4 with a NS-Forest FBeta value of 0.5711722488038278s. + Astro_3 - + - - + + - A Astro_5 in the Human Brain has the gene markers TNC, CD44 with a NS-Forest FBeta value of 0.7512626262626262s. - Astro_5 + A L2/3 IT_4 in the Human Brain has the gene markers TPBG, FAP, ONECUT2, COL5A2 with a NS-Forest FBeta value of 0.6337047353760445s. + L2/3 IT_4 - + - - + + - A Pax6 in the Human Brain has the gene markers RELN, HCRTR2 with a NS-Forest FBeta value of 0.724125093s. - Pax6 + A Pvalb_3 in the Human Brain has the gene markers TAFA4, SYT10, ANOS1, HTR4 with a NS-Forest FBeta value of 0.635593220338983s. + Pvalb_3 - + - - + + - A EC aerocyte capillary in the Human Lung has the gene markers EDNRB with a NS-Forest FBeta value of 0.83s. - EC aerocyte capillary + A Sst_12 in the Human Brain has the gene markers CBLN4, SLC24A4, EYS, PLCH1 with a NS-Forest FBeta value of 0.34348441926345613s. + Sst_12 - + - - + + - A Pax6_1 in the Human Brain has the gene markers IGFBP7, EPS8, HCRTR2 with a NS-Forest FBeta value of 0.767426273458445s. - Pax6_1 + A Vip_2 in the Human Brain has the gene markers IGFBP5, SLC22A3, PTGDS, VIP with a NS-Forest FBeta value of 0.4741379310344827s. + Vip_2 - + - - + + - A Sst_20 in the Human Brain has the gene markers QRFPR, HGF, RELN with a NS-Forest FBeta value of 0.4671717171717172s. - Sst_20 + A Pvalb_4 in the Human Brain has the gene markers MT-ND4L, RGS5_ENSG00000143248, WIF1, TAC1 with a NS-Forest FBeta value of 0.4390934844192635s. + Pvalb_4 - + - - + + - A Lymphatic EC mature in the Human Lung has the gene markers CCL21 with a NS-Forest FBeta value of 0.88s. - Lymphatic EC mature + A L2/3 IT_4 in the Human Brain has the gene markers TPBG, FAP, ONECUT2, COL5A2 with a NS-Forest FBeta value of 0.6337047353760445s. + L2/3 IT_4 - + - - + + - A Sst_21 in the Human Brain has the gene markers ANGPT1, FBN2, COL24A1 with a NS-Forest FBeta value of 0.48315602836879434s. - Sst_21 + A L2/3 IT_1 in the Human Brain has the gene markers PRSS12, ROS1, COL5A2, SLC38A11 with a NS-Forest FBeta value of 0.5517711171662125s. + L2/3 IT_1 - + - - + + - A Sst_11 in the Human Brain has the gene markers ADGRG6, PROM1, SYT9 with a NS-Forest FBeta value of 0.34898477157360397s. - Sst_11 + A L6 CT_1 in the Human Brain has the gene markers LGR6, OR1Q1, SULF1 with a NS-Forest FBeta value of 0.665374677002584s. + L6 CT_1 - + - - + + - A Sst_1 in the Human Brain has the gene markers NDST4, ANGPT1, EPB41L4A with a NS-Forest FBeta value of 0.5104166666666666s. - Sst_1 + A Sst_11 in the Human Brain has the gene markers ADGRG6, PROM1, SYT9 with a NS-Forest FBeta value of 0.34898477157360397s. + Sst_11 - + - - + + - A Vip_21 in the Human Brain has the gene markers ALDH1A2, ROR2 with a NS-Forest FBeta value of 0.6180811808118081s. - Vip_21 + A Sst_14 in the Human Brain has the gene markers SLC9A2, ROR1, EYA4 with a NS-Forest FBeta value of 0.46314741035856577s. + Sst_14 - + - - + + - A Alveolar macrophages in the Human Lung has the gene markers MSR1, FABP4 with a NS-Forest FBeta value of 0.80s. - Alveolar macrophages + A Oligo_4 in the Human Brain has the gene markers OPALIN, TRIM59, CERCAM with a NS-Forest FBeta value of 0.5434782608695652s. + Oligo_4 - + - - + + - A Lymphatic EC differentiating in the Human Lung has the gene markers SEMA3D, KALRN with a NS-Forest FBeta value of 0.42s. - Lymphatic EC differentiating + A Sst_37 in the Human Brain has the gene markers PROM1, CRHBP, SST with a NS-Forest FBeta value of 0.5s. + Sst_37 - + - + A Sncg_1 in the Human Brain has the gene markers UNC5B, TAFA4, THSD7B with a NS-Forest FBeta value of 0.5883947939262474s. @@ -802167,460 +802068,438 @@ - + - - - - A Sst_26 in the Human Brain has the gene markers MME, FBN2, MCUB with a NS-Forest FBeta value of 0.2326233183856502s. - Sst_26 - - - - - - - - - - A Sst_5 in the Human Brain has the gene markers SH3RF2, NPY, CALB1 with a NS-Forest FBeta value of 0.5248833592534992s. - Sst_5 - - - - - - - - + + - A Sst_24 in the Human Brain has the gene markers NDST4, BMP6, MYO5B with a NS-Forest FBeta value of 0.37790697674418605s. - Sst_24 + A L6b_4 in the Human Brain has the gene markers NR4A2, ATP8B4 with a NS-Forest FBeta value of 0.5812101910828025s. + L6b_4 - + - - + + - A Deuterosomal in the Human Lung has the gene markers CDC20B, CEP78 with a NS-Forest FBeta value of 0.71s. - Deuterosomal + A Lamp5 in the Human Brain has the gene markers LINC00298, KIT with a NS-Forest FBeta value of 0.814687838s. + Lamp5 - + - - + + - A Sst_25 in the Human Brain has the gene markers BLM, CALB1, STK32B with a NS-Forest FBeta value of 0.45689655172413796s. - Sst_25 + A Vip_22 in the Human Brain has the gene markers ABI3BP, SLC7A11, EDNRA with a NS-Forest FBeta value of 0.5279126213592233s. + Vip_22 - + - - + + - A L5/6 NP_3 in the Human Brain has the gene markers NPSR1-AS1, PLPP3, KIT with a NS-Forest FBeta value of 0.5273892773892773s. - L5/6 NP_3 + A Pvalb_5 in the Human Brain has the gene markers SNTB1, COBLL1, GPR149, TAC1 with a NS-Forest FBeta value of 0.6364329268292682s. + Pvalb_5 - + - - + + - A Vip_26 in the Human Brain has the gene markers SEMA3C, LINC01630, HPSE2, TAC3 with a NS-Forest FBeta value of 0.5947955390334573s. - Vip_26 + A Sncg_8 in the Human Brain has the gene markers NDST4, HTR2C, PRELID2 with a NS-Forest FBeta value of 0.49476135040745045s. + Sncg_8 - + - - + + - A Sst_4 in the Human Brain has the gene markers SCARA5, PIEZO2, CRYBG3, PLCH1 with a NS-Forest FBeta value of 0.5479002624671917s. - Sst_4 + A Sst_24 in the Human Brain has the gene markers NDST4, BMP6, MYO5B with a NS-Forest FBeta value of 0.37790697674418605s. + Sst_24 - + - - + + - A L5/6 NP_2 in the Human Brain has the gene markers SLC17A6, CRYM with a NS-Forest FBeta value of 0.4607508532423208s. - L5/6 NP_2 + A L6 IT in the Human Brain has the gene markers LINC00507, THEMIS with a NS-Forest FBeta value of 0.641695703s. + L6 IT - + - - + + - A Vip_17 in the Human Brain has the gene markers PENK, PARD3B with a NS-Forest FBeta value of 0.6040502793296089s. - Vip_17 + A L6 IT Car3_1 in the Human Brain has the gene markers LINC00348 with a NS-Forest FBeta value of 0.665s. + L6 IT Car3_1 - + - - + + - A Vip_11 in the Human Brain has the gene markers ABI3BP, MCTP2, SLC22A3, PROS1 with a NS-Forest FBeta value of 0.43523676880222845s. - Vip_11 + A Sst_25 in the Human Brain has the gene markers BLM, CALB1, STK32B with a NS-Forest FBeta value of 0.45689655172413796s. + Sst_25 - + - - + + - A Sst in the Human Brain has the gene markers SST, PLCH1 with a NS-Forest FBeta value of 0.842367005s. - Sst + A Pvalb_6 in the Human Brain has the gene markers POSTN, SULF1, CEMIP, RNF144B with a NS-Forest FBeta value of 0.29255319148936176s. + Pvalb_6 - + - - + + - A Sst_20 in the Human Brain has the gene markers QRFPR, HGF, RELN with a NS-Forest FBeta value of 0.4671717171717172s. - Sst_20 + A Sst_2 in the Human Brain has the gene markers HPGD, RGS5_ENSG00000143248, SPON1 with a NS-Forest FBeta value of 0.5613577023498695s. + Sst_2 - + - - + + - A Lamp5_7 in the Human Brain has the gene markers MYH11, MT-ND4L, KIT with a NS-Forest FBeta value of 0.42241379310344834s. - Lamp5_7 + A Pvalb_4 in the Human Brain has the gene markers MT-ND4L, RGS5_ENSG00000143248, WIF1, TAC1 with a NS-Forest FBeta value of 0.4390934844192635s. + Pvalb_4 - + - - + + - A Lamp5_3 in the Human Brain has the gene markers CA2, CPLX3, LAMP5 with a NS-Forest FBeta value of 0.6311576354679802s. - Lamp5_3 + A L5/6 NP_3 in the Human Brain has the gene markers NPSR1-AS1, PLPP3, KIT with a NS-Forest FBeta value of 0.5273892773892773s. + L5/6 NP_3 - + - - + + - A Vip in the Human Brain has the gene markers VIP with a NS-Forest FBeta value of 0.855531344s. - Vip + A Sst_29 in the Human Brain has the gene markers ENPP1, QRFPR, PIEZO2 with a NS-Forest FBeta value of 0.41353383458646614s. + Sst_29 - + - - + + - A Sst_10 in the Human Brain has the gene markers HPSE2, EYA4, SST, PLCH1 with a NS-Forest FBeta value of 0.3615384615384615s. - Sst_10 + A Sst_31 in the Human Brain has the gene markers FRZB, CBLN4, RGS5_ENSG00000143248, ARHGAP10 with a NS-Forest FBeta value of 0.4743083003952569s. + Sst_31 - + - - + + - A AT2 in the Human Lung has the gene markers SFTPA1 with a NS-Forest FBeta value of 0.95s. - AT2 + A Vip_20 in the Human Brain has the gene markers CBLN1, VIPR2, PPP1R1C, VIP with a NS-Forest FBeta value of 0.3658536585365853s. + Vip_20 - + - - + + - A Vip_15 in the Human Brain has the gene markers SVIL, VIP with a NS-Forest FBeta value of 0.6172360248447205s. - Vip_15 + A Sst_18 in the Human Brain has the gene markers ENOX2, PNOC, SST, RELN with a NS-Forest FBeta value of 0.34307875894988066s. + Sst_18 - + - - + + - A L5 ET_4 in the Human Brain has the gene markers EHF, FGF11 with a NS-Forest FBeta value of 0.7297605473204105s. - L5 ET_4 + A L6 IT in the Human Brain has the gene markers LINC00507, THEMIS with a NS-Forest FBeta value of 0.641695703s. + L6 IT - + - - + + - A Vip_4 in the Human Brain has the gene markers WNT5A, ABI3BP, VCAN with a NS-Forest FBeta value of 0.546875s. - Vip_4 + A L2/3 IT_3 in the Human Brain has the gene markers COL27A1, ONECUT2, MOXD1, BMPR1B with a NS-Forest FBeta value of 0.675117924528302s. + L2/3 IT_3 - + - - + + - A L5/6 NP_4 in the Human Brain has the gene markers FSHR, CLMN, TLL1 with a NS-Forest FBeta value of 0.740632318501171s. - L5/6 NP_4 + A Vip_3 in the Human Brain has the gene markers HPSE2, TRPC6, VIP with a NS-Forest FBeta value of 0.40249999999999997s. + Vip_3 - + - - + + - A Club (non-nasal) in the Human Lung has the gene markers CYP2F1, SCGB1A1 with a NS-Forest FBeta value of 0.68s. - Club (non-nasal) + A OPC in the Human Brain has the gene markers FERMT1 with a NS-Forest FBeta value of 0.741071429s. + OPC - + - - + + - A Vip_5 in the Human Brain has the gene markers LINC01630, IQGAP2, THSD4 with a NS-Forest FBeta value of 0.4801324503311257s. - Vip_5 + A VLMC_2 in the Human Brain has the gene markers SLC19A1, COLEC12 with a NS-Forest FBeta value of 0.876753507014028s. + VLMC_2 - + - - + + - A Sst_24 in the Human Brain has the gene markers NDST4, BMP6, MYO5B with a NS-Forest FBeta value of 0.37790697674418605s. - Sst_24 + A Sst_32 in the Human Brain has the gene markers HPGD, PENK, EYA2 with a NS-Forest FBeta value of 0.40567282321899734s. + Sst_32 - + - - + + - A VLMC_1 in the Human Brain has the gene markers TAGLN, ACTA2 with a NS-Forest FBeta value of 0.8559498956158662s. - VLMC_1 + A L2/3 IT in the Human Brain has the gene markers ONECUT2, COL5A2 with a NS-Forest FBeta value of 0.670149932s. + L2/3 IT - + - - + + - A Monocyte-derived Mph in the Human Lung has the gene markers C15orf48, CD68 with a NS-Forest FBeta value of 0.37s. - Monocyte-derived Mph + A L5/6 NP_3 in the Human Brain has the gene markers NPSR1-AS1, PLPP3, KIT with a NS-Forest FBeta value of 0.5273892773892773s. + L5/6 NP_3 - + - - + + - A Sst_26 in the Human Brain has the gene markers MME, FBN2, MCUB with a NS-Forest FBeta value of 0.2326233183856502s. - Sst_26 + A Vip_21 in the Human Brain has the gene markers ALDH1A2, ROR2 with a NS-Forest FBeta value of 0.6180811808118081s. + Vip_21 - + - - + + - A Lamp5_2 in the Human Brain has the gene markers PBX3, KIT with a NS-Forest FBeta value of 0.7316272965879266s. - Lamp5_2 + A Sncg_7 in the Human Brain has the gene markers HTR3A, SYT9, MCTP2 with a NS-Forest FBeta value of 0.7097791798107256s. + Sncg_7 - + - - + + - A Sst_15 in the Human Brain has the gene markers DPP4, EPB41L4A, FREM1, PLCH1 with a NS-Forest FBeta value of 0.45995670995671s. - Sst_15 + A L5 IT_2 in the Human Brain has the gene markers NPY2R, PCED1B, TLL1, RORB with a NS-Forest FBeta value of 0.5685240963855422s. + L5 IT_2 - + - - + + - A Sst_12 in the Human Brain has the gene markers CBLN4, SLC24A4, EYS, PLCH1 with a NS-Forest FBeta value of 0.34348441926345613s. - Sst_12 + A Lamp5_4 in the Human Brain has the gene markers ROR2, TRPC3, FBXL7, LINC00298 with a NS-Forest FBeta value of 0.40425531914893614s. + Lamp5_4 - + - - + + - A L6b_1 in the Human Brain has the gene markers SEMA3D, ITGA11, FAM160A1 with a NS-Forest FBeta value of 0.5724637681159421s. - L6b_1 + A L6 CT_3 in the Human Brain has the gene markers SULF1, MEIS2, ADAMTSL1, KCNH5 with a NS-Forest FBeta value of 0.632267441860465s. + L6 CT_3 - + - - + + - A L6b_3 in the Human Brain has the gene markers SLC15A5, ATP10A with a NS-Forest FBeta value of 0.6928969359331476s. - L6b_3 + A Sst_5 in the Human Brain has the gene markers SH3RF2, NPY, CALB1 with a NS-Forest FBeta value of 0.5248833592534992s. + Sst_5 - + - - + + - A Sst_19 in the Human Brain has the gene markers EPB41L4A, GPC5, PLCH1 with a NS-Forest FBeta value of 0.7339449541284404s. - Sst_19 + A Astro_5 in the Human Brain has the gene markers TNC, CD44 with a NS-Forest FBeta value of 0.7512626262626262s. + Astro_5 - + - - + + - A Vip_9 in the Human Brain has the gene markers SLC7A11, TNS3, PPP1R1C, COBLL1 with a NS-Forest FBeta value of 0.48302107728337235s. - Vip_9 + A L6b_5 in the Human Brain has the gene markers NXPH4, NR4A2, SEMA3E with a NS-Forest FBeta value of 0.5693519079345852s. + L6b_5 - + - - + + - A Pvalb_1 in the Human Brain has the gene markers MYBPC1, GPR149, SVIL with a NS-Forest FBeta value of 0.6944444444444444s. - Pvalb_1 + A L5/6 NP_1 in the Human Brain has the gene markers BARX2, CD36, NPSR1-AS1 with a NS-Forest FBeta value of 0.49025974025974034s. + L5/6 NP_1 - + - - + + - A EC venous pulmonary in the Human Lung has the gene markers ACKR1, SRPX with a NS-Forest FBeta value of 0.74s. - EC venous pulmonary + A Endo in the Human Brain has the gene markers FLT1, ABCG2 with a NS-Forest FBeta value of 0.923892465s. + Endo - + - - + + - A Vip_23 in the Human Brain has the gene markers KCNH8, EDNRA, KMO with a NS-Forest FBeta value of 0.54251269035533s. - Vip_23 + A L6 IT Car3_2 in the Human Brain has the gene markers SMYD1, ITGB8 with a NS-Forest FBeta value of 0.6594036697247707s. + L6 IT Car3_2 - + - - + + - A Sst_2 in the Human Brain has the gene markers HPGD, RGS5_ENSG00000143248, SPON1 with a NS-Forest FBeta value of 0.5613577023498695s. - Sst_2 + A Sst_36 in the Human Brain has the gene markers TRDN, ITGA1, PARD3B, PLCH1 with a NS-Forest FBeta value of 0.6381381381381382s. + Sst_36 - + - - + + - A Pvalb in the Human Brain has the gene markers PVALB, TAC1, MYO5B with a NS-Forest FBeta value of 0.691998764s. - Pvalb + A Pax6_1 in the Human Brain has the gene markers IGFBP7, EPS8, HCRTR2 with a NS-Forest FBeta value of 0.767426273458445s. + Pax6_1 - + - - + + - A T cells proliferating in the Human Lung has the gene markers CD3G, MKI67, PCLAF, CD3E with a NS-Forest FBeta value of 0.71s. - T cells proliferating + A Sst_5 in the Human Brain has the gene markers SH3RF2, NPY, CALB1 with a NS-Forest FBeta value of 0.5248833592534992s. + Sst_5 - + - + A Sst_30 in the Human Brain has the gene markers NOTCH2, HTR2C, FBN2 with a NS-Forest FBeta value of 0.4063786008230453s. @@ -802629,20 +802508,20 @@ - + - - + + - A L5/6 NP_6 in the Human Brain has the gene markers NPSR1-AS1, ARHGAP42 with a NS-Forest FBeta value of 0.7685614849187936s. - L5/6 NP_6 + A Sst_22 in the Human Brain has the gene markers EPB41L4A, ITGA8, SST with a NS-Forest FBeta value of 0.4351032448377581s. + Sst_22 - + - + A Sst_7 in the Human Brain has the gene markers EPSTI1, PIEZO2, HPSE2, PLCH1 with a NS-Forest FBeta value of 0.4469696969696969s. @@ -802651,317 +802530,317 @@ - + - - + + - A L5/6 NP_2 in the Human Brain has the gene markers SLC17A6, CRYM with a NS-Forest FBeta value of 0.4607508532423208s. - L5/6 NP_2 + A L6b in the Human Brain has the gene markers CCN2, ROS1 with a NS-Forest FBeta value of 0.819940964s. + L6b - + - - + + - A Lamp5_1 in the Human Brain has the gene markers ADAMTS20, KIT, FREM1 with a NS-Forest FBeta value of 0.48856548856548865s. - Lamp5_1 + A Sncg_3 in the Human Brain has the gene markers SEMA3C, MYO1B, VAV3 with a NS-Forest FBeta value of 0.4528985507246377s. + Sncg_3 - + - - + + - A L6b_4 in the Human Brain has the gene markers NR4A2, ATP8B4 with a NS-Forest FBeta value of 0.5812101910828025s. - L6b_4 + A L6 CT in the Human Brain has the gene markers SEMA5B, ADAMTSL1, SULF1 with a NS-Forest FBeta value of 0.631898455s. + L6 CT - + - - + + - A Sst_35 in the Human Brain has the gene markers ACVR1C, EYA2, TRIM67 with a NS-Forest FBeta value of 0.5226480836236933s. - Sst_35 + A VLMC_1 in the Human Brain has the gene markers TAGLN, ACTA2 with a NS-Forest FBeta value of 0.8559498956158662s. + VLMC_1 - + - - + + - A Vip_9 in the Human Brain has the gene markers SLC7A11, TNS3, PPP1R1C, COBLL1 with a NS-Forest FBeta value of 0.48302107728337235s. - Vip_9 + A Sst_28 in the Human Brain has the gene markers PROM1, NDST4, TRPC6 with a NS-Forest FBeta value of 0.5884615384615385s. + Sst_28 - + - - + + - A Oligo_3 in the Human Brain has the gene markers OPALIN, LINC01170 with a NS-Forest FBeta value of 0.713610586011342s. - Oligo_3 + A Pax6_3 in the Human Brain has the gene markers PBX3, PDLIM5, FBN2 with a NS-Forest FBeta value of 0.7090163934426228s. + Pax6_3 - + - - + + - A Sst_37 in the Human Brain has the gene markers PROM1, CRHBP, SST with a NS-Forest FBeta value of 0.5s. - Sst_37 + A L2/3 IT_2 in the Human Brain has the gene markers THSD4, TESPA1, TRPC3 with a NS-Forest FBeta value of 0.6621140142517815s. + L2/3 IT_2 - + - - + + - A OPC in the Human Brain has the gene markers FERMT1 with a NS-Forest FBeta value of 0.741071429s. - OPC + A Sst_24 in the Human Brain has the gene markers NDST4, BMP6, MYO5B with a NS-Forest FBeta value of 0.37790697674418605s. + Sst_24 - + - - + + - A L5/6 NP_1 in the Human Brain has the gene markers BARX2, CD36, NPSR1-AS1 with a NS-Forest FBeta value of 0.49025974025974034s. - L5/6 NP_1 + A Vip_3 in the Human Brain has the gene markers HPSE2, TRPC6, VIP with a NS-Forest FBeta value of 0.40249999999999997s. + Vip_3 - + - - + + - A Sncg_6 in the Human Brain has the gene markers THSD7B, ADAMTSL1, RELN with a NS-Forest FBeta value of 0.5738434163701067s. - Sncg_6 + A Sst_36 in the Human Brain has the gene markers TRDN, ITGA1, PARD3B, PLCH1 with a NS-Forest FBeta value of 0.6381381381381382s. + Sst_36 - + - - + + - A L6 CT_1 in the Human Brain has the gene markers LGR6, OR1Q1, SULF1 with a NS-Forest FBeta value of 0.665374677002584s. - L6 CT_1 + A Vip_14 in the Human Brain has the gene markers ST18, KCNH8, CA10, VIP with a NS-Forest FBeta value of 0.5968468468468467s. + Vip_14 - + - - + + - A Sst_23 in the Human Brain has the gene markers NIBAN1, PROM1, THSD7B with a NS-Forest FBeta value of 0.6134686346863469s. - Sst_23 + A L5 IT_4 in the Human Brain has the gene markers C22orf34, LDLRAD3, RORB, KCNK2 with a NS-Forest FBeta value of 0.44211195928753183s. + L5 IT_4 - + - - + + - A Sncg_1 in the Human Brain has the gene markers UNC5B, TAFA4, THSD7B with a NS-Forest FBeta value of 0.5883947939262474s. - Sncg_1 + A Sst Chodl_1 in the Human Brain has the gene markers NPY with a NS-Forest FBeta value of 0.894026186579378s. + Sst Chodl_1 - + - - + + - A L6b_2 in the Human Brain has the gene markers NPFFR2, ROS1 with a NS-Forest FBeta value of 0.565711462450593s. - L6b_2 + A Lamp5_4 in the Human Brain has the gene markers ROR2, TRPC3, FBXL7, LINC00298 with a NS-Forest FBeta value of 0.40425531914893614s. + Lamp5_4 - + - - + + - A Tuft in the Human Lung has the gene markers POU2F3, HOMER3, MYB with a NS-Forest FBeta value of 0.56s. - Tuft + A L6 IT_1 in the Human Brain has the gene markers THEMIS, HOPX, MKX with a NS-Forest FBeta value of 0.6710122699386504s. + L6 IT_1 - + - - + + - A L6b in the Human Brain has the gene markers CCN2, ROS1 with a NS-Forest FBeta value of 0.819940964s. - L6b + A Sst_32 in the Human Brain has the gene markers HPGD, PENK, EYA2 with a NS-Forest FBeta value of 0.40567282321899734s. + Sst_32 - + - - + + - A Sst_32 in the Human Brain has the gene markers HPGD, PENK, EYA2 with a NS-Forest FBeta value of 0.40567282321899734s. - Sst_32 + A L6 CT_2 in the Human Brain has the gene markers SYT6, ITGA11, SEMA5B with a NS-Forest FBeta value of 0.791868932038835s. + L6 CT_2 - + - - + + - A Astro_1 in the Human Brain has the gene markers SLC1A3, HPSE2 with a NS-Forest FBeta value of 0.6796875s. - Astro_1 + A Vip_13 in the Human Brain has the gene markers ST18, PTGDS, VIP with a NS-Forest FBeta value of 0.42776639344262285s. + Vip_13 - + - - + + - A L6b_2 in the Human Brain has the gene markers NPFFR2, ROS1 with a NS-Forest FBeta value of 0.565711462450593s. - L6b_2 + A VLMC in the Human Brain has the gene markers CARMN with a NS-Forest FBeta value of 0.863105175s. + VLMC - + - - + + - A L6 CT_1 in the Human Brain has the gene markers LGR6, OR1Q1, SULF1 with a NS-Forest FBeta value of 0.665374677002584s. - L6 CT_1 + A L4 IT_6 in the Human Brain has the gene markers PLEKHH2, CLMN, ST8SIA4 with a NS-Forest FBeta value of 0.6703910614525139s. + L4 IT_6 - + - - + + - A Sst_8 in the Human Brain has the gene markers STK32A, SYT9, RELN with a NS-Forest FBeta value of 0.5061619718309859s. - Sst_8 + A L5 ET_2 in the Human Brain has the gene markers ATP6V1C2, LRP2, ST8SIA2 with a NS-Forest FBeta value of 0.7593749999999999s. + L5 ET_2 - + - - + + - A Vip_23 in the Human Brain has the gene markers KCNH8, EDNRA, KMO with a NS-Forest FBeta value of 0.54251269035533s. - Vip_23 + A Lamp5_3 in the Human Brain has the gene markers CA2, CPLX3, LAMP5 with a NS-Forest FBeta value of 0.6311576354679802s. + Lamp5_3 - + - - + + - A Migratory DCs in the Human Lung has the gene markers CCL22 with a NS-Forest FBeta value of 0.50s. - Migratory DCs + A Vip_27 in the Human Brain has the gene markers DACH2, CHRNA7, MIR4500HG, VIP with a NS-Forest FBeta value of 0.5466778805719091s. + Vip_27 - + - - + + - A L5 ET_1 in the Human Brain has the gene markers LINC00922, POU3F1 with a NS-Forest FBeta value of 0.728891820580475s. - L5 ET_1 + A Pvalb_7 in the Human Brain has the gene markers SULF1, ZNF385D-AS2 with a NS-Forest FBeta value of 0.5650087260034904s. + Pvalb_7 - + - - + + - A Pvalb_4 in the Human Brain has the gene markers MT-ND4L, RGS5_ENSG00000143248, WIF1, TAC1 with a NS-Forest FBeta value of 0.4390934844192635s. - Pvalb_4 + A Oligo_3 in the Human Brain has the gene markers OPALIN, LINC01170 with a NS-Forest FBeta value of 0.713610586011342s. + Oligo_3 - + - - + + - A L5/6 NP in the Human Brain has the gene markers NPSR1-AS1, TLL1 with a NS-Forest FBeta value of 0.899288218s. - L5/6 NP + A Vip_11 in the Human Brain has the gene markers ABI3BP, MCTP2, SLC22A3, PROS1 with a NS-Forest FBeta value of 0.43523676880222845s. + Vip_11 - + - - + + - A Oligo_2 in the Human Brain has the gene markers MBOAT1, PLP1 with a NS-Forest FBeta value of 0.8189655172413793s. - Oligo_2 + A Sst_12 in the Human Brain has the gene markers CBLN4, SLC24A4, EYS, PLCH1 with a NS-Forest FBeta value of 0.34348441926345613s. + Sst_12 - + - - + + - A Sst_9 in the Human Brain has the gene markers MYO10, ARHGAP6, FREM1 with a NS-Forest FBeta value of 0.3506097560975609s. - Sst_9 + A Pax6_2 in the Human Brain has the gene markers TGFBR2, BCHE, RELN with a NS-Forest FBeta value of 0.7676056338028169s. + Pax6_2 - + - + A L5/6 NP in the Human Brain has the gene markers NPSR1-AS1, TLL1 with a NS-Forest FBeta value of 0.899288218s. @@ -802970,141 +802849,141 @@ - + - - + + - A Sst_13 in the Human Brain has the gene markers FBN2, TRPC6, EPB41L4A with a NS-Forest FBeta value of 0.5461876832844575s. - Sst_13 + A L6 IT Car3_2 in the Human Brain has the gene markers SMYD1, ITGB8 with a NS-Forest FBeta value of 0.6594036697247707s. + L6 IT Car3_2 - + - - + + - A SMG mucous in the Human Lung has the gene markers BPIFB2 with a NS-Forest FBeta value of 0.93s. - SMG mucous + A Sst_18 in the Human Brain has the gene markers ENOX2, PNOC, SST, RELN with a NS-Forest FBeta value of 0.34307875894988066s. + Sst_18 - + - - + + - A Vip_24 in the Human Brain has the gene markers LYPD1, ENHO, CHRNA2 with a NS-Forest FBeta value of 0.36276223776223776s. - Vip_24 + A L5/6 NP_5 in the Human Brain has the gene markers COL9A1, NPSR1, TLL1 with a NS-Forest FBeta value of 0.5373831775700935s. + L5/6 NP_5 - + - - + + - A L6b_4 in the Human Brain has the gene markers NR4A2, ATP8B4 with a NS-Forest FBeta value of 0.5812101910828025s. - L6b_4 + A L6 CT_2 in the Human Brain has the gene markers SYT6, ITGA11, SEMA5B with a NS-Forest FBeta value of 0.791868932038835s. + L6 CT_2 - + - - + + - A Pvalb_7 in the Human Brain has the gene markers SULF1, ZNF385D-AS2 with a NS-Forest FBeta value of 0.5650087260034904s. - Pvalb_7 + A Vip_29 in the Human Brain has the gene markers IQGAP2, KCNJ2, TAC1, MYO5B, VIP with a NS-Forest FBeta value of 0.49180327868852464s. + Vip_29 - + - - + + - A VLMC_1 in the Human Brain has the gene markers TAGLN, ACTA2 with a NS-Forest FBeta value of 0.8559498956158662s. - VLMC_1 + A Vip_18 in the Human Brain has the gene markers NOX4, RXRG, NDST4 with a NS-Forest FBeta value of 0.38953488372093026s. + Vip_18 - + - - + + - A Endo_2 in the Human Brain has the gene markers HERC2P3, PRKCH with a NS-Forest FBeta value of 0.8270877944325483s. - Endo_2 + A L4 IT_2 in the Human Brain has the gene markers C6orf141, ST8SIA4 with a NS-Forest FBeta value of 0.7738095238095238s. + L4 IT_2 - + - - + + - A Smooth muscle FAM83D+ in the Human Lung has the gene markers ACTG2 with a NS-Forest FBeta value of 0.77s. - Smooth muscle FAM83D+ + A Astro_3 in the Human Brain has the gene markers HEPN1, F3, AGT, GJA1, AQP4 with a NS-Forest FBeta value of 0.5711722488038278s. + Astro_3 - + - - + + - A L5 ET_3 in the Human Brain has the gene markers ONECUT1, TTC6, SEMA3D, FAM189A2 with a NS-Forest FBeta value of 0.8891454965357967s. - L5 ET_3 + A L2/3 IT in the Human Brain has the gene markers ONECUT2, COL5A2 with a NS-Forest FBeta value of 0.670149932s. + L2/3 IT - + - - + + - A Lamp5_4 in the Human Brain has the gene markers ROR2, TRPC3, FBXL7, LINC00298 with a NS-Forest FBeta value of 0.40425531914893614s. - Lamp5_4 + A L6 IT Car3_1 in the Human Brain has the gene markers LINC00348 with a NS-Forest FBeta value of 0.665s. + L6 IT Car3_1 - + - - + + - A Sst_14 in the Human Brain has the gene markers SLC9A2, ROR1, EYA4 with a NS-Forest FBeta value of 0.46314741035856577s. - Sst_14 + A Vip_16 in the Human Brain has the gene markers NDST4, SEMA3C, HTR2C, VIP with a NS-Forest FBeta value of 0.38s. + Vip_16 - + - - + + - A Vip_1 in the Human Brain has the gene markers FLT1, LRRC1, SHISA8 with a NS-Forest FBeta value of 0.400763358778626s. - Vip_1 + A L5 ET in the Human Brain has the gene markers CHST8, POU3F1 with a NS-Forest FBeta value of 0.815891473s. + L5 ET - + - + A Pvalb_3 in the Human Brain has the gene markers TAFA4, SYT10, ANOS1, HTR4 with a NS-Forest FBeta value of 0.635593220338983s. @@ -803113,1450 +802992,1450 @@ - + - - + + - A Vip_22 in the Human Brain has the gene markers ABI3BP, SLC7A11, EDNRA with a NS-Forest FBeta value of 0.5279126213592233s. - Vip_22 + A Sst_9 in the Human Brain has the gene markers MYO10, ARHGAP6, FREM1 with a NS-Forest FBeta value of 0.3506097560975609s. + Sst_9 - + - - + + - A Ionocyte in the Human Lung has the gene markers ASCL3, BSND with a NS-Forest FBeta value of 0.82s. - Ionocyte + A Oligo in the Human Brain has the gene markers ST18, PLP1 with a NS-Forest FBeta value of 0.97185637s. + Oligo - + - - + + - A Sst in the Human Brain has the gene markers SST, PLCH1 with a NS-Forest FBeta value of 0.842367005s. - Sst + A Sncg_1 in the Human Brain has the gene markers UNC5B, TAFA4, THSD7B with a NS-Forest FBeta value of 0.5883947939262474s. + Sncg_1 - + - - + + - A Sst_3 in the Human Brain has the gene markers TCF7L1, FBXL7, CBLN2 with a NS-Forest FBeta value of 0.6936997319034853s. - Sst_3 + A Lamp5_2 in the Human Brain has the gene markers PBX3, KIT with a NS-Forest FBeta value of 0.7316272965879266s. + Lamp5_2 - + - - + + - A VLMC in the Human Brain has the gene markers CARMN with a NS-Forest FBeta value of 0.863105175s. - VLMC + A L2/3 IT_5 in the Human Brain has the gene markers GPX3, ADCYAP1, RMST with a NS-Forest FBeta value of 0.5061141304347826s. + L2/3 IT_5 - + - - + + - A CD4 T cells in the Human Lung has the gene markers LTB, CD3D with a NS-Forest FBeta value of 0.59s. - CD4 T cells + A Vip in the Human Brain has the gene markers VIP with a NS-Forest FBeta value of 0.855531344s. + Vip - + - - + + - A EC general capillary in the Human Lung has the gene markers FCN3, CA4 with a NS-Forest FBeta value of 0.78s. - EC general capillary + A Sst_25 in the Human Brain has the gene markers BLM, CALB1, STK32B with a NS-Forest FBeta value of 0.45689655172413796s. + Sst_25 - + - - + + - A Sncg_5 in the Human Brain has the gene markers COL5A2, TMEM47, MEGF11 with a NS-Forest FBeta value of 0.5214285714285715s. - Sncg_5 + A Astro_2 in the Human Brain has the gene markers LINC01411, OBI1-AS1 with a NS-Forest FBeta value of 0.5566801619433198s. + Astro_2 - + - - + + - A Suprabasal in the Human Lung has the gene markers TNC, KRT15, SERPINB4 with a NS-Forest FBeta value of 0.62s. - Suprabasal + A L6b_1 in the Human Brain has the gene markers SEMA3D, ITGA11, FAM160A1 with a NS-Forest FBeta value of 0.5724637681159421s. + L6b_1 - + - - + + - A L5 ET_2 in the Human Brain has the gene markers ATP6V1C2, LRP2, ST8SIA2 with a NS-Forest FBeta value of 0.7593749999999999s. - L5 ET_2 + A Sst_16 in the Human Brain has the gene markers LINC01630, DACH1, VAV3 with a NS-Forest FBeta value of 0.6000000000000001s. + Sst_16 - + - - + + - A Goblet (bronchial) in the Human Lung has the gene markers PLCG2, ANKRD36C with a NS-Forest FBeta value of 0.55s. - Goblet (bronchial) + A Vip_25 in the Human Brain has the gene markers NOX4, IQGAP2, CBLN4 with a NS-Forest FBeta value of 0.5275229357798166s. + Vip_25 - + - - + + - A Sst_36 in the Human Brain has the gene markers TRDN, ITGA1, PARD3B, PLCH1 with a NS-Forest FBeta value of 0.6381381381381382s. - Sst_36 + A Vip_22 in the Human Brain has the gene markers ABI3BP, SLC7A11, EDNRA with a NS-Forest FBeta value of 0.5279126213592233s. + Vip_22 - + - - + + - A Sncg_7 in the Human Brain has the gene markers HTR3A, SYT9, MCTP2 with a NS-Forest FBeta value of 0.7097791798107256s. - Sncg_7 + A Astro_5 in the Human Brain has the gene markers TNC, CD44 with a NS-Forest FBeta value of 0.7512626262626262s. + Astro_5 - + - - + + - A Endo in the Human Brain has the gene markers FLT1, ABCG2 with a NS-Forest FBeta value of 0.923892465s. - Endo + A L4 IT_4 in the Human Brain has the gene markers STAC, KCNH8, SYT2 with a NS-Forest FBeta value of 0.6526243093922651s. + L4 IT_4 - + - - + + - A Sst_29 in the Human Brain has the gene markers ENPP1, QRFPR, PIEZO2 with a NS-Forest FBeta value of 0.41353383458646614s. - Sst_29 + A Sst_14 in the Human Brain has the gene markers SLC9A2, ROR1, EYA4 with a NS-Forest FBeta value of 0.46314741035856577s. + Sst_14 - + - - + + - A L6b_5 in the Human Brain has the gene markers NXPH4, NR4A2, SEMA3E with a NS-Forest FBeta value of 0.5693519079345852s. - L6b_5 + A Sncg_6 in the Human Brain has the gene markers THSD7B, ADAMTSL1, RELN with a NS-Forest FBeta value of 0.5738434163701067s. + Sncg_6 - + - - + + - A L5/6 NP_5 in the Human Brain has the gene markers COL9A1, NPSR1, TLL1 with a NS-Forest FBeta value of 0.5373831775700935s. - L5/6 NP_5 + A L5 IT_5 in the Human Brain has the gene markers NPNT, CA10, RORB, KCNK2 with a NS-Forest FBeta value of 0.5813953488372092s. + L5 IT_5 - + - - + + - A VLMC_2 in the Human Brain has the gene markers SLC19A1, COLEC12 with a NS-Forest FBeta value of 0.876753507014028s. - VLMC_2 + A L5 IT_2 in the Human Brain has the gene markers NPY2R, PCED1B, TLL1, RORB with a NS-Forest FBeta value of 0.5685240963855422s. + L5 IT_2 - + - - + + - A Vip_27 in the Human Brain has the gene markers DACH2, CHRNA7, MIR4500HG, VIP with a NS-Forest FBeta value of 0.5466778805719091s. - Vip_27 + A Sst_33 in the Human Brain has the gene markers CRYBG3, BMP6, HTR2C with a NS-Forest FBeta value of 0.39086687306501544s. + Sst_33 - + - - + + - A Vip_18 in the Human Brain has the gene markers NOX4, RXRG, NDST4 with a NS-Forest FBeta value of 0.38953488372093026s. - Vip_18 + A OPC in the Human Brain has the gene markers FERMT1 with a NS-Forest FBeta value of 0.741071429s. + OPC - + - - + + - A Alveolar macrophages in the Human Lung has the gene markers MSR1, FABP4 with a NS-Forest FBeta value of 0.80s. - Alveolar macrophages + A Sst_20 in the Human Brain has the gene markers QRFPR, HGF, RELN with a NS-Forest FBeta value of 0.4671717171717172s. + Sst_20 - + - - + + - A Astro_5 in the Human Brain has the gene markers TNC, CD44 with a NS-Forest FBeta value of 0.7512626262626262s. - Astro_5 + A Pvalb_6 in the Human Brain has the gene markers POSTN, SULF1, CEMIP, RNF144B with a NS-Forest FBeta value of 0.29255319148936176s. + Pvalb_6 - + - - + + - A Vip_19 in the Human Brain has the gene markers CBLN1, HTR2C, VIP with a NS-Forest FBeta value of 0.5353075170842825s. - Vip_19 + A Vip_7 in the Human Brain has the gene markers CCN2, PCDH18, SEMA3C, HPSE2 with a NS-Forest FBeta value of 0.40059347181008903s. + Vip_7 - + - - + + - A L5 ET_3 in the Human Brain has the gene markers ONECUT1, TTC6, SEMA3D, FAM189A2 with a NS-Forest FBeta value of 0.8891454965357967s. - L5 ET_3 + A L4 IT_3 in the Human Brain has the gene markers TMEM215, KCNH8, RORB with a NS-Forest FBeta value of 0.6151315789473684s. + L4 IT_3 - + - - + + - A VLMC in the Human Brain has the gene markers CARMN with a NS-Forest FBeta value of 0.863105175s. - VLMC + A Pvalb_1 in the Human Brain has the gene markers MYBPC1, GPR149, SVIL with a NS-Forest FBeta value of 0.6944444444444444s. + Pvalb_1 - + - - + + - A Alveolar Mph CCL3+ in the Human Lung has the gene markers TNIP3, CXCL5 with a NS-Forest FBeta value of 0.67s. - Alveolar Mph CCL3+ + A Oligo in the Human Brain has the gene markers ST18, PLP1 with a NS-Forest FBeta value of 0.97185637s. + Oligo - + - - + + - A Pvalb_9 in the Human Brain has the gene markers PVALB, POSTN with a NS-Forest FBeta value of 0.5845323741007195s. - Pvalb_9 + A Vip_9 in the Human Brain has the gene markers SLC7A11, TNS3, PPP1R1C, COBLL1 with a NS-Forest FBeta value of 0.48302107728337235s. + Vip_9 - + - - + + - A L5 ET in the Human Brain has the gene markers CHST8, POU3F1 with a NS-Forest FBeta value of 0.815891473s. - L5 ET + A Sst_28 in the Human Brain has the gene markers PROM1, NDST4, TRPC6 with a NS-Forest FBeta value of 0.5884615384615385s. + Sst_28 - + - - + + - A Sst_22 in the Human Brain has the gene markers EPB41L4A, ITGA8, SST with a NS-Forest FBeta value of 0.4351032448377581s. - Sst_22 + A Vip_9 in the Human Brain has the gene markers SLC7A11, TNS3, PPP1R1C, COBLL1 with a NS-Forest FBeta value of 0.48302107728337235s. + Vip_9 - + - - + + - A Endo in the Human Brain has the gene markers FLT1, ABCG2 with a NS-Forest FBeta value of 0.923892465s. - Endo + A Lamp5_3 in the Human Brain has the gene markers CA2, CPLX3, LAMP5 with a NS-Forest FBeta value of 0.6311576354679802s. + Lamp5_3 - + - - + + - A Oligo_2 in the Human Brain has the gene markers MBOAT1, PLP1 with a NS-Forest FBeta value of 0.8189655172413793s. - Oligo_2 + A L2/3 IT_1 in the Human Brain has the gene markers PRSS12, ROS1, COL5A2, SLC38A11 with a NS-Forest FBeta value of 0.5517711171662125s. + L2/3 IT_1 - + - - + + - A Lamp5_5 in the Human Brain has the gene markers NDNF, NPNT, LAMP5 with a NS-Forest FBeta value of 0.6249999999999999s. - Lamp5_5 + A L4 IT in the Human Brain has the gene markers RORB, ST8SIA4 with a NS-Forest FBeta value of 0.720108696s. + L4 IT - + - - + + - A EC arterial in the Human Lung has the gene markers DKK2 with a NS-Forest FBeta value of 0.71s. - EC arterial + A Pvalb_7 in the Human Brain has the gene markers SULF1, ZNF385D-AS2 with a NS-Forest FBeta value of 0.5650087260034904s. + Pvalb_7 - + - - + + - A EC venous systemic in the Human Lung has the gene markers PLVAP, EMCN with a NS-Forest FBeta value of 0.63s. - EC venous systemic + A Astro in the Human Brain has the gene markers OBI1-AS1 with a NS-Forest FBeta value of 0.957043843s. + Astro - + - - + + - A DC1 in the Human Lung has the gene markers CLEC9A, DNASE1L3 with a NS-Forest FBeta value of 0.77s. - DC1 + A Astro_1 in the Human Brain has the gene markers SLC1A3, HPSE2 with a NS-Forest FBeta value of 0.6796875s. + Astro_1 - + - - + + - A VLMC_2 in the Human Brain has the gene markers SLC19A1, COLEC12 with a NS-Forest FBeta value of 0.876753507014028s. - VLMC_2 + A L5 IT_5 in the Human Brain has the gene markers NPNT, CA10, RORB, KCNK2 with a NS-Forest FBeta value of 0.5813953488372092s. + L5 IT_5 - + - - + + - A Astro in the Human Brain has the gene markers OBI1-AS1 with a NS-Forest FBeta value of 0.957043843s. - Astro + A Vip_2 in the Human Brain has the gene markers IGFBP5, SLC22A3, PTGDS, VIP with a NS-Forest FBeta value of 0.4741379310344827s. + Vip_2 - + - - + + - A Vip_12 in the Human Brain has the gene markers SLC7A11, HCRTR2, EPS8 with a NS-Forest FBeta value of 0.5889057750759878s. - Vip_12 + A Sst_1 in the Human Brain has the gene markers NDST4, ANGPT1, EPB41L4A with a NS-Forest FBeta value of 0.5104166666666666s. + Sst_1 - + - - + + - A Sst_28 in the Human Brain has the gene markers PROM1, NDST4, TRPC6 with a NS-Forest FBeta value of 0.5884615384615385s. - Sst_28 + A L6b_4 in the Human Brain has the gene markers NR4A2, ATP8B4 with a NS-Forest FBeta value of 0.5812101910828025s. + L6b_4 - + - - + + - A L6 CT_2 in the Human Brain has the gene markers SYT6, ITGA11, SEMA5B with a NS-Forest FBeta value of 0.791868932038835s. - L6 CT_2 + A Oligo_1 in the Human Brain has the gene markers CERCAM, DOCK5 with a NS-Forest FBeta value of 0.24613623354321695s. + Oligo_1 - + - - + + - A Lamp5 Lhx6 in the Human Brain has the gene markers CHST9, LAMP5 with a NS-Forest FBeta value of 0.821678322s. - Lamp5 Lhx6 + A Sst_6 in the Human Brain has the gene markers DPP4, MAFB with a NS-Forest FBeta value of 0.38520801232665647s. + Sst_6 - + - - + + - A Sst_9 in the Human Brain has the gene markers MYO10, ARHGAP6, FREM1 with a NS-Forest FBeta value of 0.3506097560975609s. - Sst_9 + A Sncg_6 in the Human Brain has the gene markers THSD7B, ADAMTSL1, RELN with a NS-Forest FBeta value of 0.5738434163701067s. + Sncg_6 - + - - + + - A Sst_18 in the Human Brain has the gene markers ENOX2, PNOC, SST, RELN with a NS-Forest FBeta value of 0.34307875894988066s. - Sst_18 + A Vip_23 in the Human Brain has the gene markers KCNH8, EDNRA, KMO with a NS-Forest FBeta value of 0.54251269035533s. + Vip_23 - + - - + + - A Sst_34 in the Human Brain has the gene markers TTC29, TCF7L1 with a NS-Forest FBeta value of 0.565749235474006s. - Sst_34 + A L5 IT_1 in the Human Brain has the gene markers CHST2, TLL1, RORB with a NS-Forest FBeta value of 0.6250000000000001s. + L5 IT_1 - + - - + + - A Vip_29 in the Human Brain has the gene markers IQGAP2, KCNJ2, TAC1, MYO5B, VIP with a NS-Forest FBeta value of 0.49180327868852464s. - Vip_29 + A Lamp5_5 in the Human Brain has the gene markers NDNF, NPNT, LAMP5 with a NS-Forest FBeta value of 0.6249999999999999s. + Lamp5_5 - + - - + + - A pre-TB secretory in the Human Lung has the gene markers SCGB1A1, SFTPB with a NS-Forest FBeta value of 0.73s. - pre-TB secretory + A L4 IT_6 in the Human Brain has the gene markers PLEKHH2, CLMN, ST8SIA4 with a NS-Forest FBeta value of 0.6703910614525139s. + L4 IT_6 - + - - + + - A Pvalb_5 in the Human Brain has the gene markers SNTB1, COBLL1, GPR149, TAC1 with a NS-Forest FBeta value of 0.6364329268292682s. - Pvalb_5 + A Chandelier in the Human Brain has the gene markers GPR149, CA8 with a NS-Forest FBeta value of 0.799748111s. + Chandelier - + - - + + - A Lamp5_2 in the Human Brain has the gene markers PBX3, KIT with a NS-Forest FBeta value of 0.7316272965879266s. - Lamp5_2 + A L4 IT_4 in the Human Brain has the gene markers STAC, KCNH8, SYT2 with a NS-Forest FBeta value of 0.6526243093922651s. + L4 IT_4 - + - - + + - A Vip_11 in the Human Brain has the gene markers ABI3BP, MCTP2, SLC22A3, PROS1 with a NS-Forest FBeta value of 0.43523676880222845s. - Vip_11 + A L5/6 NP_4 in the Human Brain has the gene markers FSHR, CLMN, TLL1 with a NS-Forest FBeta value of 0.740632318501171s. + L5/6 NP_4 - + - - + + - A Sst_8 in the Human Brain has the gene markers STK32A, SYT9, RELN with a NS-Forest FBeta value of 0.5061619718309859s. - Sst_8 + A Sst_16 in the Human Brain has the gene markers LINC01630, DACH1, VAV3 with a NS-Forest FBeta value of 0.6000000000000001s. + Sst_16 - + - - + + - A Chandelier in the Human Brain has the gene markers GPR149, CA8 with a NS-Forest FBeta value of 0.799748111s. - Chandelier + A Lamp5_6 in the Human Brain has the gene markers NDNF, KIT, TRPC3 with a NS-Forest FBeta value of 0.6357493857493858s. + Lamp5_6 - + - - + + - A Sncg_2 in the Human Brain has the gene markers FOXO1, CA10, PRELID2, THSD7B with a NS-Forest FBeta value of 0.7396788990825688s. - Sncg_2 + A Vip_6 in the Human Brain has the gene markers SMOC1, IQGAP2, PARD3B with a NS-Forest FBeta value of 0.5082179930795848s. + Vip_6 - + - - + + - A Pvalb_2 in the Human Brain has the gene markers BCHE, SEMA3C, GPC5 with a NS-Forest FBeta value of 0.7717391304347827s. - Pvalb_2 + A Pvalb_8 in the Human Brain has the gene markers CA8, FGFR2, TAC1 with a NS-Forest FBeta value of 0.5676733780760627s. + Pvalb_8 - + - - + + - A AT1 in the Human Lung has the gene markers AGER with a NS-Forest FBeta value of 0.85s. - AT1 + A L4 IT_5 in the Human Brain has the gene markers COL22A1, CMAHP with a NS-Forest FBeta value of 0.6576797385620915s. + L4 IT_5 - + - - + + - A Lamp5_3 in the Human Brain has the gene markers CA2, CPLX3, LAMP5 with a NS-Forest FBeta value of 0.6311576354679802s. - Lamp5_3 + A L6 IT_2 in the Human Brain has the gene markers LINC00343, ADAMTS3, PXDN with a NS-Forest FBeta value of 0.5810546875s. + L6 IT_2 - + - - + + - A Oligo in the Human Brain has the gene markers ST18, PLP1 with a NS-Forest FBeta value of 0.97185637s. - Oligo + A Sst_27 in the Human Brain has the gene markers EDNRA, MT-ND5, FREM1, SST with a NS-Forest FBeta value of 0.39168937329700276s. + Sst_27 - + - - + + - A Vip_7 in the Human Brain has the gene markers CCN2, PCDH18, SEMA3C, HPSE2 with a NS-Forest FBeta value of 0.40059347181008903s. - Vip_7 + A Vip_10 in the Human Brain has the gene markers ABI3BP, KCNG2, PARD3B with a NS-Forest FBeta value of 0.5405405405405405s. + Vip_10 - + - - + + - A Plasmacytoid DCs in the Human Lung has the gene markers LILRA4, JCHAIN with a NS-Forest FBeta value of 0.79s. - Plasmacytoid DCs + A Sst_33 in the Human Brain has the gene markers CRYBG3, BMP6, HTR2C with a NS-Forest FBeta value of 0.39086687306501544s. + Sst_33 - + - - + + - A Vip_28 in the Human Brain has the gene markers HTR2C, DCN with a NS-Forest FBeta value of 0.3763440860215054s. - Vip_28 + A Sst in the Human Brain has the gene markers SST, PLCH1 with a NS-Forest FBeta value of 0.842367005s. + Sst - + - - + + - A L6b_6 in the Human Brain has the gene markers PCOLCE2, FAM160A1, SULF1 with a NS-Forest FBeta value of 0.570388349514563s. - L6b_6 + A Astro_4 in the Human Brain has the gene markers PPP1R3C, ETNPPL, ID4, OBI1-AS1 with a NS-Forest FBeta value of 0.47279792746113986s. + Astro_4 - + - - + + - A Sst_15 in the Human Brain has the gene markers DPP4, EPB41L4A, FREM1, PLCH1 with a NS-Forest FBeta value of 0.45995670995671s. - Sst_15 + A Sst_4 in the Human Brain has the gene markers SCARA5, PIEZO2, CRYBG3, PLCH1 with a NS-Forest FBeta value of 0.5479002624671917s. + Sst_4 - + - - + + - A Vip_7 in the Human Brain has the gene markers CCN2, PCDH18, SEMA3C, HPSE2 with a NS-Forest FBeta value of 0.40059347181008903s. - Vip_7 + A Oligo_2 in the Human Brain has the gene markers MBOAT1, PLP1 with a NS-Forest FBeta value of 0.8189655172413793s. + Oligo_2 - + - - + + - A Smooth muscle in the Human Lung has the gene markers ACTA2, TAGLN with a NS-Forest FBeta value of 0.69s. - Smooth muscle + A Vip_20 in the Human Brain has the gene markers CBLN1, VIPR2, PPP1R1C, VIP with a NS-Forest FBeta value of 0.3658536585365853s. + Vip_20 - + - - + + - A Sst_32 in the Human Brain has the gene markers HPGD, PENK, EYA2 with a NS-Forest FBeta value of 0.40567282321899734s. - Sst_32 + A Vip_25 in the Human Brain has the gene markers NOX4, IQGAP2, CBLN4 with a NS-Forest FBeta value of 0.5275229357798166s. + Vip_25 - + - - + + - A Alveolar fibroblasts in the Human Lung has the gene markers AOC3, LUM with a NS-Forest FBeta value of 0.70s. - Alveolar fibroblasts + A Sst_21 in the Human Brain has the gene markers ANGPT1, FBN2, COL24A1 with a NS-Forest FBeta value of 0.48315602836879434s. + Sst_21 - + - - + + - A Sst_33 in the Human Brain has the gene markers CRYBG3, BMP6, HTR2C with a NS-Forest FBeta value of 0.39086687306501544s. - Sst_33 + A Sst_26 in the Human Brain has the gene markers MME, FBN2, MCUB with a NS-Forest FBeta value of 0.2326233183856502s. + Sst_26 - + - - + + - A Mesothelium in the Human Lung has the gene markers CALB2, PRG4 with a NS-Forest FBeta value of 0.89s. - Mesothelium + A L5 ET_3 in the Human Brain has the gene markers ONECUT1, TTC6, SEMA3D, FAM189A2 with a NS-Forest FBeta value of 0.8891454965357967s. + L5 ET_3 - + - - + + - A Sncg_2 in the Human Brain has the gene markers FOXO1, CA10, PRELID2, THSD7B with a NS-Forest FBeta value of 0.7396788990825688s. - Sncg_2 + A L5 IT_3 in the Human Brain has the gene markers RPRM, HPCA, RORB with a NS-Forest FBeta value of 0.49479166666666663s. + L5 IT_3 - + - - + + - A Pvalb in the Human Brain has the gene markers PVALB, TAC1, MYO5B with a NS-Forest FBeta value of 0.691998764s. - Pvalb + A Vip_16 in the Human Brain has the gene markers NDST4, SEMA3C, HTR2C, VIP with a NS-Forest FBeta value of 0.38s. + Vip_16 - + - - + + - A Vip_22 in the Human Brain has the gene markers ABI3BP, SLC7A11, EDNRA with a NS-Forest FBeta value of 0.5279126213592233s. - Vip_22 + A Sst_1 in the Human Brain has the gene markers NDST4, ANGPT1, EPB41L4A with a NS-Forest FBeta value of 0.5104166666666666s. + Sst_1 - + - - + + - A Pvalb_8 in the Human Brain has the gene markers CA8, FGFR2, TAC1 with a NS-Forest FBeta value of 0.5676733780760627s. - Pvalb_8 + A L5 IT in the Human Brain has the gene markers ARSJ, RORB, KCNK2 with a NS-Forest FBeta value of 0.764261336s. + L5 IT - + - - + + - A Vip_24 in the Human Brain has the gene markers LYPD1, ENHO, CHRNA2 with a NS-Forest FBeta value of 0.36276223776223776s. - Vip_24 + A Sst Chodl in the Human Brain has the gene markers NPY with a NS-Forest FBeta value of 0.894026187s. + Sst Chodl - + - - + + - A Lamp5_6 in the Human Brain has the gene markers NDNF, KIT, TRPC3 with a NS-Forest FBeta value of 0.6357493857493858s. - Lamp5_6 + A Lamp5_5 in the Human Brain has the gene markers NDNF, NPNT, LAMP5 with a NS-Forest FBeta value of 0.6249999999999999s. + Lamp5_5 - + - - + + - A Adventitial fibroblasts in the Human Lung has the gene markers SCARA5, CD248 with a NS-Forest FBeta value of 0.85s. - Adventitial fibroblasts + A Pvalb_2 in the Human Brain has the gene markers BCHE, SEMA3C, GPC5 with a NS-Forest FBeta value of 0.7717391304347827s. + Pvalb_2 - + - - + + - A Pvalb_1 in the Human Brain has the gene markers MYBPC1, GPR149, SVIL with a NS-Forest FBeta value of 0.6944444444444444s. - Pvalb_1 + A Vip_1 in the Human Brain has the gene markers FLT1, LRRC1, SHISA8 with a NS-Forest FBeta value of 0.400763358778626s. + Vip_1 - + - - + + - A Pvalb_4 in the Human Brain has the gene markers MT-ND4L, RGS5_ENSG00000143248, WIF1, TAC1 with a NS-Forest FBeta value of 0.4390934844192635s. - Pvalb_4 + A L6 IT Car3 in the Human Brain has the gene markers SMYD1, THEMIS with a NS-Forest FBeta value of 0.877752028s. + L6 IT Car3 - + - - + + - A Neuroendocrine in the Human Lung has the gene markers CHGA, GRP with a NS-Forest FBeta value of 0.94s. - Neuroendocrine + A L6b_3 in the Human Brain has the gene markers SLC15A5, ATP10A with a NS-Forest FBeta value of 0.6928969359331476s. + L6b_3 - + - - + + - A Sst_4 in the Human Brain has the gene markers SCARA5, PIEZO2, CRYBG3, PLCH1 with a NS-Forest FBeta value of 0.5479002624671917s. - Sst_4 + A L6b_3 in the Human Brain has the gene markers SLC15A5, ATP10A with a NS-Forest FBeta value of 0.6928969359331476s. + L6b_3 - + - - + + - A Astro_2 in the Human Brain has the gene markers LINC01411, OBI1-AS1 with a NS-Forest FBeta value of 0.5566801619433198s. - Astro_2 + A Sst_22 in the Human Brain has the gene markers EPB41L4A, ITGA8, SST with a NS-Forest FBeta value of 0.4351032448377581s. + Sst_22 - + - - + + - A Sst_16 in the Human Brain has the gene markers LINC01630, DACH1, VAV3 with a NS-Forest FBeta value of 0.6000000000000001s. - Sst_16 + A Vip_28 in the Human Brain has the gene markers HTR2C, DCN with a NS-Forest FBeta value of 0.3763440860215054s. + Vip_28 - + - - + + - A Sncg_8 in the Human Brain has the gene markers NDST4, HTR2C, PRELID2 with a NS-Forest FBeta value of 0.49476135040745045s. - Sncg_8 + A Vip_8 in the Human Brain has the gene markers VWDE, WSCD1, DACH2 with a NS-Forest FBeta value of 0.3183962264150943s. + Vip_8 - + - - + + - A L6 CT_2 in the Human Brain has the gene markers SYT6, ITGA11, SEMA5B with a NS-Forest FBeta value of 0.791868932038835s. - L6 CT_2 + A Sst_7 in the Human Brain has the gene markers EPSTI1, PIEZO2, HPSE2, PLCH1 with a NS-Forest FBeta value of 0.4469696969696969s. + Sst_7 - + - - + + - A Sst_21 in the Human Brain has the gene markers ANGPT1, FBN2, COL24A1 with a NS-Forest FBeta value of 0.48315602836879434s. - Sst_21 + A Sncg_2 in the Human Brain has the gene markers FOXO1, CA10, PRELID2, THSD7B with a NS-Forest FBeta value of 0.7396788990825688s. + Sncg_2 - + - - + + - A Non-classical monocytes in the Human Lung has the gene markers LILRB2, LILRB1 with a NS-Forest FBeta value of 0.46s. - Non-classical monocytes + A L5 ET_4 in the Human Brain has the gene markers EHF, FGF11 with a NS-Forest FBeta value of 0.7297605473204105s. + L5 ET_4 - + - - + + - A Vip_6 in the Human Brain has the gene markers SMOC1, IQGAP2, PARD3B with a NS-Forest FBeta value of 0.5082179930795848s. - Vip_6 + A Vip in the Human Brain has the gene markers VIP with a NS-Forest FBeta value of 0.855531344s. + Vip - + - - + + - A Sncg_3 in the Human Brain has the gene markers SEMA3C, MYO1B, VAV3 with a NS-Forest FBeta value of 0.4528985507246377s. - Sncg_3 + A Vip_13 in the Human Brain has the gene markers ST18, PTGDS, VIP with a NS-Forest FBeta value of 0.42776639344262285s. + Vip_13 - + - - + + - A Sst_13 in the Human Brain has the gene markers FBN2, TRPC6, EPB41L4A with a NS-Forest FBeta value of 0.5461876832844575s. - Sst_13 + A Sncg in the Human Brain has the gene markers RXRG, THSD7B with a NS-Forest FBeta value of 0.628943702s. + Sncg - + - - + + - A Basal resting in the Human Lung has the gene markers KRT15, KRT17 with a NS-Forest FBeta value of 0.75s. - Basal resting + A Lamp5_1 in the Human Brain has the gene markers ADAMTS20, KIT, FREM1 with a NS-Forest FBeta value of 0.48856548856548865s. + Lamp5_1 - + - - + + - A L6b_5 in the Human Brain has the gene markers NXPH4, NR4A2, SEMA3E with a NS-Forest FBeta value of 0.5693519079345852s. - L6b_5 + A L6 CT_3 in the Human Brain has the gene markers SULF1, MEIS2, ADAMTSL1, KCNH5 with a NS-Forest FBeta value of 0.632267441860465s. + L6 CT_3 - + - - + + - A Classical monocytes in the Human Lung has the gene markers S100A12, FCN1 with a NS-Forest FBeta value of 0.77s. - Classical monocytes + A Oligo_4 in the Human Brain has the gene markers OPALIN, TRIM59, CERCAM with a NS-Forest FBeta value of 0.5434782608695652s. + Oligo_4 - + - - + + - A Vip_25 in the Human Brain has the gene markers NOX4, IQGAP2, CBLN4 with a NS-Forest FBeta value of 0.5275229357798166s. - Vip_25 + A Sst_34 in the Human Brain has the gene markers TTC29, TCF7L1 with a NS-Forest FBeta value of 0.565749235474006s. + Sst_34 - + - - + + - A Vip_17 in the Human Brain has the gene markers PENK, PARD3B with a NS-Forest FBeta value of 0.6040502793296089s. - Vip_17 + A Oligo_2 in the Human Brain has the gene markers MBOAT1, PLP1 with a NS-Forest FBeta value of 0.8189655172413793s. + Oligo_2 - + - - + + - A Vip in the Human Brain has the gene markers VIP with a NS-Forest FBeta value of 0.855531344s. - Vip + A Sncg_5 in the Human Brain has the gene markers COL5A2, TMEM47, MEGF11 with a NS-Forest FBeta value of 0.5214285714285715s. + Sncg_5 - + - - + + - A SMG serous (bronchial) in the Human Lung has the gene markers PRR4, C6orf58 with a NS-Forest FBeta value of 0.75s. - SMG serous (bronchial) + A L5 IT_6 in the Human Brain has the gene markers NPFFR2, SULF2, RORB with a NS-Forest FBeta value of 0.6619822485207101s. + L5 IT_6 - + - - + + - A Astro_4 in the Human Brain has the gene markers PPP1R3C, ETNPPL, ID4, OBI1-AS1 with a NS-Forest FBeta value of 0.47279792746113986s. - Astro_4 + A L4 IT_5 in the Human Brain has the gene markers COL22A1, CMAHP with a NS-Forest FBeta value of 0.6576797385620915s. + L4 IT_5 - + - - + + - A Goblet (subsegmental) in the Human Lung has the gene markers MTRNR2L8, SCGB1A1 with a NS-Forest FBeta value of 0.61s. - Goblet (subsegmental) + A Sst in the Human Brain has the gene markers SST, PLCH1 with a NS-Forest FBeta value of 0.842367005s. + Sst - + - - + + - A Pvalb_3 in the Human Brain has the gene markers TAFA4, SYT10, ANOS1, HTR4 with a NS-Forest FBeta value of 0.635593220338983s. - Pvalb_3 + A Vip_4 in the Human Brain has the gene markers WNT5A, ABI3BP, VCAN with a NS-Forest FBeta value of 0.546875s. + Vip_4 - + - - + + - A Sst_31 in the Human Brain has the gene markers FRZB, CBLN4, RGS5_ENSG00000143248, ARHGAP10 with a NS-Forest FBeta value of 0.4743083003952569s. - Sst_31 + A VLMC_2 in the Human Brain has the gene markers SLC19A1, COLEC12 with a NS-Forest FBeta value of 0.876753507014028s. + VLMC_2 - + - - + + - A Vip_28 in the Human Brain has the gene markers HTR2C, DCN with a NS-Forest FBeta value of 0.3763440860215054s. - Vip_28 + A Sncg_4 in the Human Brain has the gene markers LINC01539, DCN, THSD7B with a NS-Forest FBeta value of 0.6752411575562701s. + Sncg_4 - + - - + + - A L6 CT in the Human Brain has the gene markers SEMA5B, ADAMTSL1, SULF1 with a NS-Forest FBeta value of 0.631898455s. - L6 CT + A L2/3 IT_6 in the Human Brain has the gene markers LINC00507, ADAMTS3, LY86-AS1 with a NS-Forest FBeta value of 0.5509868421052632s. + L2/3 IT_6 - + - - + + - A Oligo_4 in the Human Brain has the gene markers OPALIN, TRIM59, CERCAM with a NS-Forest FBeta value of 0.5434782608695652s. - Oligo_4 + A L5/6 NP_1 in the Human Brain has the gene markers BARX2, CD36, NPSR1-AS1 with a NS-Forest FBeta value of 0.49025974025974034s. + L5/6 NP_1 - + - - + + - A Sst_6 in the Human Brain has the gene markers DPP4, MAFB with a NS-Forest FBeta value of 0.38520801232665647s. - Sst_6 + A Sst_17 in the Human Brain has the gene markers PROM1, EYA2, PLCH1 with a NS-Forest FBeta value of 0.40226063829787234s. + Sst_17 - + - - + + - A Sst_33 in the Human Brain has the gene markers CRYBG3, BMP6, HTR2C with a NS-Forest FBeta value of 0.39086687306501544s. - Sst_33 + A Sst_4 in the Human Brain has the gene markers SCARA5, PIEZO2, CRYBG3, PLCH1 with a NS-Forest FBeta value of 0.5479002624671917s. + Sst_4 - + - - + + - A Sst_25 in the Human Brain has the gene markers BLM, CALB1, STK32B with a NS-Forest FBeta value of 0.45689655172413796s. - Sst_25 + A Lamp5_6 in the Human Brain has the gene markers NDNF, KIT, TRPC3 with a NS-Forest FBeta value of 0.6357493857493858s. + Lamp5_6 - + - - + + - A Sst_2 in the Human Brain has the gene markers HPGD, RGS5_ENSG00000143248, SPON1 with a NS-Forest FBeta value of 0.5613577023498695s. - Sst_2 + A VLMC in the Human Brain has the gene markers CARMN with a NS-Forest FBeta value of 0.863105175s. + VLMC - + - - + + - A Vip_14 in the Human Brain has the gene markers ST18, KCNH8, CA10, VIP with a NS-Forest FBeta value of 0.5968468468468467s. - Vip_14 + A Astro in the Human Brain has the gene markers OBI1-AS1 with a NS-Forest FBeta value of 0.957043843s. + Astro - + - - + + - A Vip_13 in the Human Brain has the gene markers ST18, PTGDS, VIP with a NS-Forest FBeta value of 0.42776639344262285s. - Vip_13 + A Sst_15 in the Human Brain has the gene markers DPP4, EPB41L4A, FREM1, PLCH1 with a NS-Forest FBeta value of 0.45995670995671s. + Sst_15 - + - - + + - A Sst_18 in the Human Brain has the gene markers ENOX2, PNOC, SST, RELN with a NS-Forest FBeta value of 0.34307875894988066s. - Sst_18 + A Vip_23 in the Human Brain has the gene markers KCNH8, EDNRA, KMO with a NS-Forest FBeta value of 0.54251269035533s. + Vip_23 - + - - + + - A Sncg_5 in the Human Brain has the gene markers COL5A2, TMEM47, MEGF11 with a NS-Forest FBeta value of 0.5214285714285715s. - Sncg_5 + A Vip_12 in the Human Brain has the gene markers SLC7A11, HCRTR2, EPS8 with a NS-Forest FBeta value of 0.5889057750759878s. + Vip_12 - + - - + + - A Sst_27 in the Human Brain has the gene markers EDNRA, MT-ND5, FREM1, SST with a NS-Forest FBeta value of 0.39168937329700276s. - Sst_27 + A L6 CT_1 in the Human Brain has the gene markers LGR6, OR1Q1, SULF1 with a NS-Forest FBeta value of 0.665374677002584s. + L6 CT_1 - + - - + + - A Lamp5_1 in the Human Brain has the gene markers ADAMTS20, KIT, FREM1 with a NS-Forest FBeta value of 0.48856548856548865s. - Lamp5_1 + A L2/3 IT_3 in the Human Brain has the gene markers COL27A1, ONECUT2, MOXD1, BMPR1B with a NS-Forest FBeta value of 0.675117924528302s. + L2/3 IT_3 - + - - + + - A Hematopoietic stem cells in the Human Lung has the gene markers CYTL1, FAM30A with a NS-Forest FBeta value of 0.66s. - Hematopoietic stem cells + A Sst_20 in the Human Brain has the gene markers QRFPR, HGF, RELN with a NS-Forest FBeta value of 0.4671717171717172s. + Sst_20 - + - - + + - A Pax6_1 in the Human Brain has the gene markers IGFBP7, EPS8, HCRTR2 with a NS-Forest FBeta value of 0.767426273458445s. - Pax6_1 + A L5 ET_1 in the Human Brain has the gene markers LINC00922, POU3F1 with a NS-Forest FBeta value of 0.728891820580475s. + L5 ET_1 - + - - + + - A L5/6 NP_3 in the Human Brain has the gene markers NPSR1-AS1, PLPP3, KIT with a NS-Forest FBeta value of 0.5273892773892773s. - L5/6 NP_3 + A Sst_10 in the Human Brain has the gene markers HPSE2, EYA4, SST, PLCH1 with a NS-Forest FBeta value of 0.3615384615384615s. + Sst_10 - + - - + + - A Oligo_1 in the Human Brain has the gene markers CERCAM, DOCK5 with a NS-Forest FBeta value of 0.24613623354321695s. - Oligo_1 + A L5/6 NP_2 in the Human Brain has the gene markers SLC17A6, CRYM with a NS-Forest FBeta value of 0.4607508532423208s. + L5/6 NP_2 - + - - + + - A SM activated stress response in the Human Lung has the gene markers RERGL, C11orf96 with a NS-Forest FBeta value of 0.58s. - SM activated stress response + A Sncg_3 in the Human Brain has the gene markers SEMA3C, MYO1B, VAV3 with a NS-Forest FBeta value of 0.4528985507246377s. + Sncg_3 - + - - + + - A Astro in the Human Brain has the gene markers OBI1-AS1 with a NS-Forest FBeta value of 0.957043843s. - Astro + A Sst_2 in the Human Brain has the gene markers HPGD, RGS5_ENSG00000143248, SPON1 with a NS-Forest FBeta value of 0.5613577023498695s. + Sst_2 - + - - + + - A Vip_16 in the Human Brain has the gene markers NDST4, SEMA3C, HTR2C, VIP with a NS-Forest FBeta value of 0.38s. - Vip_16 + A L5 IT_3 in the Human Brain has the gene markers RPRM, HPCA, RORB with a NS-Forest FBeta value of 0.49479166666666663s. + L5 IT_3 - + - - + + - A Sst_5 in the Human Brain has the gene markers SH3RF2, NPY, CALB1 with a NS-Forest FBeta value of 0.5248833592534992s. - Sst_5 + A Sncg in the Human Brain has the gene markers RXRG, THSD7B with a NS-Forest FBeta value of 0.628943702s. + Sncg - + - - + + - A Pvalb_6 in the Human Brain has the gene markers POSTN, SULF1, CEMIP, RNF144B with a NS-Forest FBeta value of 0.29255319148936176s. - Pvalb_6 + A Pax6 in the Human Brain has the gene markers RELN, HCRTR2 with a NS-Forest FBeta value of 0.724125093s. + Pax6 - + - - + + - A Sst Chodl_1 in the Human Brain has the gene markers NPY with a NS-Forest FBeta value of 0.894026186579378s. - Sst Chodl_1 + A Sst_26 in the Human Brain has the gene markers MME, FBN2, MCUB with a NS-Forest FBeta value of 0.2326233183856502s. + Sst_26 - + - - + + - A L6 CT_3 in the Human Brain has the gene markers SULF1, MEIS2, ADAMTSL1, KCNH5 with a NS-Forest FBeta value of 0.632267441860465s. - L6 CT_3 + A Astro_1 in the Human Brain has the gene markers SLC1A3, HPSE2 with a NS-Forest FBeta value of 0.6796875s. + Astro_1 - + - - + + - A SMG duct in the Human Lung has the gene markers GLYATL2, DMBT1 with a NS-Forest FBeta value of 0.46s. - SMG duct + A Sst Chodl in the Human Brain has the gene markers NPY with a NS-Forest FBeta value of 0.894026187s. + Sst Chodl - + - - + + - A Vip_15 in the Human Brain has the gene markers SVIL, VIP with a NS-Forest FBeta value of 0.6172360248447205s. - Vip_15 + A Sst_9 in the Human Brain has the gene markers MYO10, ARHGAP6, FREM1 with a NS-Forest FBeta value of 0.3506097560975609s. + Sst_9 - + - - + + - A Hillock-like in the Human Lung has the gene markers KRT14, KRT6A with a NS-Forest FBeta value of 0.66s. - Hillock-like + A L5/6 NP_5 in the Human Brain has the gene markers COL9A1, NPSR1, TLL1 with a NS-Forest FBeta value of 0.5373831775700935s. + L5/6 NP_5 - + - - + + - A Plasma cells in the Human Lung has the gene markers JCHAIN with a NS-Forest FBeta value of 0.91s. - Plasma cells + A Sst_3 in the Human Brain has the gene markers TCF7L1, FBXL7, CBLN2 with a NS-Forest FBeta value of 0.6936997319034853s. + Sst_3 - + - - + + - A Oligo_3 in the Human Brain has the gene markers OPALIN, LINC01170 with a NS-Forest FBeta value of 0.713610586011342s. - Oligo_3 + A L4 IT in the Human Brain has the gene markers RORB, ST8SIA4 with a NS-Forest FBeta value of 0.720108696s. + L4 IT - + - - + + - A Sst Chodl in the Human Brain has the gene markers NPY with a NS-Forest FBeta value of 0.894026187s. - Sst Chodl + A Sncg_4 in the Human Brain has the gene markers LINC01539, DCN, THSD7B with a NS-Forest FBeta value of 0.6752411575562701s. + Sncg_4 - + - - + + - A Sst_1 in the Human Brain has the gene markers NDST4, ANGPT1, EPB41L4A with a NS-Forest FBeta value of 0.5104166666666666s. - Sst_1 + A Sst_35 in the Human Brain has the gene markers ACVR1C, EYA2, TRIM67 with a NS-Forest FBeta value of 0.5226480836236933s. + Sst_35 - + - - + + - A Sst_14 in the Human Brain has the gene markers SLC9A2, ROR1, EYA4 with a NS-Forest FBeta value of 0.46314741035856577s. - Sst_14 + A L6 IT Car3 in the Human Brain has the gene markers SMYD1, THEMIS with a NS-Forest FBeta value of 0.877752028s. + L6 IT Car3 - + - - + + - A Vip_2 in the Human Brain has the gene markers IGFBP5, SLC22A3, PTGDS, VIP with a NS-Forest FBeta value of 0.4741379310344827s. - Vip_2 + A Lamp5 Lhx6 in the Human Brain has the gene markers CHST9, LAMP5 with a NS-Forest FBeta value of 0.821678322s. + Lamp5 Lhx6 - + - + A Micro/PVM in the Human Brain has the gene markers APBB1IP, DOCK8 with a NS-Forest FBeta value of 0.955105634s. @@ -804565,31 +804444,20 @@ - - - - - - A Vip_4 in the Human Brain has the gene markers WNT5A, ABI3BP, VCAN with a NS-Forest FBeta value of 0.546875s. - Vip_4 - - - - - + - - + + - A Pvalb_6 in the Human Brain has the gene markers POSTN, SULF1, CEMIP, RNF144B with a NS-Forest FBeta value of 0.29255319148936176s. - Pvalb_6 + A Sst_15 in the Human Brain has the gene markers DPP4, EPB41L4A, FREM1, PLCH1 with a NS-Forest FBeta value of 0.45995670995671s. + Sst_15 - + - + A Vip_27 in the Human Brain has the gene markers DACH2, CHRNA7, MIR4500HG, VIP with a NS-Forest FBeta value of 0.5466778805719091s. @@ -804598,86 +804466,86 @@ - + - - + + - A Vip_5 in the Human Brain has the gene markers LINC01630, IQGAP2, THSD4 with a NS-Forest FBeta value of 0.4801324503311257s. - Vip_5 + A Pax6_2 in the Human Brain has the gene markers TGFBR2, BCHE, RELN with a NS-Forest FBeta value of 0.7676056338028169s. + Pax6_2 - + - - + + - A Oligo in the Human Brain has the gene markers ST18, PLP1 with a NS-Forest FBeta value of 0.97185637s. - Oligo + A Sst_31 in the Human Brain has the gene markers FRZB, CBLN4, RGS5_ENSG00000143248, ARHGAP10 with a NS-Forest FBeta value of 0.4743083003952569s. + Sst_31 - + - - + + - A Lamp5_5 in the Human Brain has the gene markers NDNF, NPNT, LAMP5 with a NS-Forest FBeta value of 0.6249999999999999s. - Lamp5_5 + A Vip_26 in the Human Brain has the gene markers SEMA3C, LINC01630, HPSE2, TAC3 with a NS-Forest FBeta value of 0.5947955390334573s. + Vip_26 - + - - + + - A Pax6_4 in the Human Brain has the gene markers PALMD, RELN with a NS-Forest FBeta value of 0.8731422505307855s. - Pax6_4 + A Sst_21 in the Human Brain has the gene markers ANGPT1, FBN2, COL24A1 with a NS-Forest FBeta value of 0.48315602836879434s. + Sst_21 - + - - + + - A Peribronchial fibroblasts in the Human Lung has the gene markers DPT, APOD with a NS-Forest FBeta value of 0.58s. - Peribronchial fibroblasts + A L6 IT_2 in the Human Brain has the gene markers LINC00343, ADAMTS3, PXDN with a NS-Forest FBeta value of 0.5810546875s. + L6 IT_2 - + - - + + - A Vip_13 in the Human Brain has the gene markers ST18, PTGDS, VIP with a NS-Forest FBeta value of 0.42776639344262285s. - Vip_13 + A Sst_13 in the Human Brain has the gene markers FBN2, TRPC6, EPB41L4A with a NS-Forest FBeta value of 0.5461876832844575s. + Sst_13 - + - - + + - A B cells in the Human Lung has the gene markers MS4A1, CD79A with a NS-Forest FBeta value of 0.86s. - B cells + A L5/6 NP_2 in the Human Brain has the gene markers SLC17A6, CRYM with a NS-Forest FBeta value of 0.4607508532423208s. + L5/6 NP_2 - + - + A Lamp5 in the Human Brain has the gene markers LINC00298, KIT with a NS-Forest FBeta value of 0.814687838s. @@ -804686,240 +804554,262 @@ - + - - + + - A Vip_1 in the Human Brain has the gene markers FLT1, LRRC1, SHISA8 with a NS-Forest FBeta value of 0.400763358778626s. - Vip_1 + A Vip_29 in the Human Brain has the gene markers IQGAP2, KCNJ2, TAC1, MYO5B, VIP with a NS-Forest FBeta value of 0.49180327868852464s. + Vip_29 - + - - + + - A Lamp5 in the Human Brain has the gene markers LINC00298, KIT with a NS-Forest FBeta value of 0.814687838s. - Lamp5 + A L6 CT in the Human Brain has the gene markers SEMA5B, ADAMTSL1, SULF1 with a NS-Forest FBeta value of 0.631898455s. + L6 CT - + - - + + - A Oligo_1 in the Human Brain has the gene markers CERCAM, DOCK5 with a NS-Forest FBeta value of 0.24613623354321695s. - Oligo_1 + A Vip_15 in the Human Brain has the gene markers SVIL, VIP with a NS-Forest FBeta value of 0.6172360248447205s. + Vip_15 - + - - + + - A L6b_1 in the Human Brain has the gene markers SEMA3D, ITGA11, FAM160A1 with a NS-Forest FBeta value of 0.5724637681159421s. - L6b_1 + A L4 IT_1 in the Human Brain has the gene markers TPBG, RP11-197K6.1, ST8SIA4 with a NS-Forest FBeta value of 0.6129032258064517s. + L4 IT_1 - + - - + + - A L6 CT_3 in the Human Brain has the gene markers SULF1, MEIS2, ADAMTSL1, KCNH5 with a NS-Forest FBeta value of 0.632267441860465s. - L6 CT_3 + A Vip_11 in the Human Brain has the gene markers ABI3BP, MCTP2, SLC22A3, PROS1 with a NS-Forest FBeta value of 0.43523676880222845s. + Vip_11 - + - - + + - A Pvalb_7 in the Human Brain has the gene markers SULF1, ZNF385D-AS2 with a NS-Forest FBeta value of 0.5650087260034904s. - Pvalb_7 + A Vip_4 in the Human Brain has the gene markers WNT5A, ABI3BP, VCAN with a NS-Forest FBeta value of 0.546875s. + Vip_4 - + - - + + - A Pvalb_9 in the Human Brain has the gene markers PVALB, POSTN with a NS-Forest FBeta value of 0.5845323741007195s. - Pvalb_9 + A Vip_14 in the Human Brain has the gene markers ST18, KCNH8, CA10, VIP with a NS-Forest FBeta value of 0.5968468468468467s. + Vip_14 - + - - + + - A Pericytes in the Human Lung has the gene markers HIGD1B, KCNK3 with a NS-Forest FBeta value of 0.84s. - Pericytes + A Endo_1 in the Human Brain has the gene markers COLEC12, VWF, FLT1, ABCG2 with a NS-Forest FBeta value of 0.831353919239905s. + Endo_1 - + - - + + - A Pvalb_5 in the Human Brain has the gene markers SNTB1, COBLL1, GPR149, TAC1 with a NS-Forest FBeta value of 0.6364329268292682s. - Pvalb_5 + A Oligo_3 in the Human Brain has the gene markers OPALIN, LINC01170 with a NS-Forest FBeta value of 0.713610586011342s. + Oligo_3 - + - - + + - A SMG serous (nasal) in the Human Lung has the gene markers STATH with a NS-Forest FBeta value of 0.92s. - SMG serous (nasal) + A Sst_23 in the Human Brain has the gene markers NIBAN1, PROM1, THSD7B with a NS-Forest FBeta value of 0.6134686346863469s. + Sst_23 - + - - + + - A L5/6 NP_1 in the Human Brain has the gene markers BARX2, CD36, NPSR1-AS1 with a NS-Forest FBeta value of 0.49025974025974034s. - L5/6 NP_1 + A Vip_15 in the Human Brain has the gene markers SVIL, VIP with a NS-Forest FBeta value of 0.6172360248447205s. + Vip_15 - + - - + + - A Sncg_6 in the Human Brain has the gene markers THSD7B, ADAMTSL1, RELN with a NS-Forest FBeta value of 0.5738434163701067s. - Sncg_6 + A Sst_19 in the Human Brain has the gene markers EPB41L4A, GPC5, PLCH1 with a NS-Forest FBeta value of 0.7339449541284404s. + Sst_19 - + - - + + - A Sst_35 in the Human Brain has the gene markers ACVR1C, EYA2, TRIM67 with a NS-Forest FBeta value of 0.5226480836236933s. - Sst_35 + A Astro_4 in the Human Brain has the gene markers PPP1R3C, ETNPPL, ID4, OBI1-AS1 with a NS-Forest FBeta value of 0.47279792746113986s. + Astro_4 - + - - + + - A Smooth muscle in the Human Lung has the gene markers ACTA2, TAGLN with a NS-Forest FBeta value of 0.69s. - Smooth muscle + A Sst_8 in the Human Brain has the gene markers STK32A, SYT9, RELN with a NS-Forest FBeta value of 0.5061619718309859s. + Sst_8 - + - - + + - A Club (nasal) in the Human Lung has the gene markers TFCP2L1, PSCA with a NS-Forest FBeta value of 0.43s. - Club (nasal) + A L5 ET_3 in the Human Brain has the gene markers ONECUT1, TTC6, SEMA3D, FAM189A2 with a NS-Forest FBeta value of 0.8891454965357967s. + L5 ET_3 - + - - + + - A Multiciliated (nasal) in the Human Lung has the gene markers FMO3, MRLN, OMG with a NS-Forest FBeta value of 0.59s. - Multiciliated (nasal) + A Oligo_1 in the Human Brain has the gene markers CERCAM, DOCK5 with a NS-Forest FBeta value of 0.24613623354321695s. + Oligo_1 - + - - + + - A Vip_3 in the Human Brain has the gene markers HPSE2, TRPC6, VIP with a NS-Forest FBeta value of 0.40249999999999997s. - Vip_3 + A Pax6_4 in the Human Brain has the gene markers PALMD, RELN with a NS-Forest FBeta value of 0.8731422505307855s. + Pax6_4 - + - - + + - A Vip_6 in the Human Brain has the gene markers SMOC1, IQGAP2, PARD3B with a NS-Forest FBeta value of 0.5082179930795848s. - Vip_6 + A Sst_34 in the Human Brain has the gene markers TTC29, TCF7L1 with a NS-Forest FBeta value of 0.565749235474006s. + Sst_34 - + - - + + - A Sst_3 in the Human Brain has the gene markers TCF7L1, FBXL7, CBLN2 with a NS-Forest FBeta value of 0.6936997319034853s. - Sst_3 + A Vip_7 in the Human Brain has the gene markers CCN2, PCDH18, SEMA3C, HPSE2 with a NS-Forest FBeta value of 0.40059347181008903s. + Vip_7 - + - - + + - A Astro_1 in the Human Brain has the gene markers SLC1A3, HPSE2 with a NS-Forest FBeta value of 0.6796875s. - Astro_1 + A Lamp5_7 in the Human Brain has the gene markers MYH11, MT-ND4L, KIT with a NS-Forest FBeta value of 0.42241379310344834s. + Lamp5_7 - + - - + + - A L6 CT in the Human Brain has the gene markers SEMA5B, ADAMTSL1, SULF1 with a NS-Forest FBeta value of 0.631898455s. - L6 CT + A L5 IT_4 in the Human Brain has the gene markers C22orf34, LDLRAD3, RORB, KCNK2 with a NS-Forest FBeta value of 0.44211195928753183s. + L5 IT_4 + + + + + + + + + + A Vip_8 in the Human Brain has the gene markers VWDE, WSCD1, DACH2 with a NS-Forest FBeta value of 0.3183962264150943s. + Vip_8 + + + + + + + + + + A Sst_27 in the Human Brain has the gene markers EDNRA, MT-ND5, FREM1, SST with a NS-Forest FBeta value of 0.39168937329700276s. + Sst_27 - + - + A Sst_30 in the Human Brain has the gene markers NOTCH2, HTR2C, FBN2 with a NS-Forest FBeta value of 0.4063786008230453s. @@ -804928,431 +804818,442 @@ - + - - + + - A L5/6 NP_5 in the Human Brain has the gene markers COL9A1, NPSR1, TLL1 with a NS-Forest FBeta value of 0.5373831775700935s. - L5/6 NP_5 + A Pax6_1 in the Human Brain has the gene markers IGFBP7, EPS8, HCRTR2 with a NS-Forest FBeta value of 0.767426273458445s. + Pax6_1 - + - - + + - A Sncg_4 in the Human Brain has the gene markers LINC01539, DCN, THSD7B with a NS-Forest FBeta value of 0.6752411575562701s. - Sncg_4 + A Pvalb_9 in the Human Brain has the gene markers PVALB, POSTN with a NS-Forest FBeta value of 0.5845323741007195s. + Pvalb_9 - + - - + + - A Sst_6 in the Human Brain has the gene markers DPP4, MAFB with a NS-Forest FBeta value of 0.38520801232665647s. - Sst_6 + A L2/3 IT_6 in the Human Brain has the gene markers LINC00507, ADAMTS3, LY86-AS1 with a NS-Forest FBeta value of 0.5509868421052632s. + L2/3 IT_6 - + - - + + - A Sst_37 in the Human Brain has the gene markers PROM1, CRHBP, SST with a NS-Forest FBeta value of 0.5s. - Sst_37 + A Sst_11 in the Human Brain has the gene markers ADGRG6, PROM1, SYT9 with a NS-Forest FBeta value of 0.34898477157360397s. + Sst_11 - + - - + + - A Vip_3 in the Human Brain has the gene markers HPSE2, TRPC6, VIP with a NS-Forest FBeta value of 0.40249999999999997s. - Vip_3 + A Sncg_2 in the Human Brain has the gene markers FOXO1, CA10, PRELID2, THSD7B with a NS-Forest FBeta value of 0.7396788990825688s. + Sncg_2 - + - - + + - A L5 ET_1 in the Human Brain has the gene markers LINC00922, POU3F1 with a NS-Forest FBeta value of 0.728891820580475s. - L5 ET_1 + A Vip_24 in the Human Brain has the gene markers LYPD1, ENHO, CHRNA2 with a NS-Forest FBeta value of 0.36276223776223776s. + Vip_24 - + - - + + - A Pax6_2 in the Human Brain has the gene markers TGFBR2, BCHE, RELN with a NS-Forest FBeta value of 0.7676056338028169s. - Pax6_2 + A Sncg_8 in the Human Brain has the gene markers NDST4, HTR2C, PRELID2 with a NS-Forest FBeta value of 0.49476135040745045s. + Sncg_8 - + - - + + - A Astro_3 in the Human Brain has the gene markers HEPN1, F3, AGT, GJA1, AQP4 with a NS-Forest FBeta value of 0.5711722488038278s. - Astro_3 + A Sst_3 in the Human Brain has the gene markers TCF7L1, FBXL7, CBLN2 with a NS-Forest FBeta value of 0.6936997319034853s. + Sst_3 - + - - + + - A L6b in the Human Brain has the gene markers CCN2, ROS1 with a NS-Forest FBeta value of 0.819940964s. - L6b + A L4 IT_2 in the Human Brain has the gene markers C6orf141, ST8SIA4 with a NS-Forest FBeta value of 0.7738095238095238s. + L4 IT_2 - + - - + + - A Vip_20 in the Human Brain has the gene markers CBLN1, VIPR2, PPP1R1C, VIP with a NS-Forest FBeta value of 0.3658536585365853s. - Vip_20 + A VLMC_1 in the Human Brain has the gene markers TAGLN, ACTA2 with a NS-Forest FBeta value of 0.8559498956158662s. + VLMC_1 - + - - + + - A Sst_17 in the Human Brain has the gene markers PROM1, EYA2, PLCH1 with a NS-Forest FBeta value of 0.40226063829787234s. - Sst_17 + A Sst_37 in the Human Brain has the gene markers PROM1, CRHBP, SST with a NS-Forest FBeta value of 0.5s. + Sst_37 - + - - + + - A Sst_12 in the Human Brain has the gene markers CBLN4, SLC24A4, EYS, PLCH1 with a NS-Forest FBeta value of 0.34348441926345613s. - Sst_12 + A L5 ET_2 in the Human Brain has the gene markers ATP6V1C2, LRP2, ST8SIA2 with a NS-Forest FBeta value of 0.7593749999999999s. + L5 ET_2 - + - - + + - A Sst_31 in the Human Brain has the gene markers FRZB, CBLN4, RGS5_ENSG00000143248, ARHGAP10 with a NS-Forest FBeta value of 0.4743083003952569s. - Sst_31 + A Pvalb_8 in the Human Brain has the gene markers CA8, FGFR2, TAC1 with a NS-Forest FBeta value of 0.5676733780760627s. + Pvalb_8 - + - - + + - A NK cells in the Human Lung has the gene markers KLRF1, PRF1 with a NS-Forest FBeta value of 0.79s. - NK cells + A Chandelier in the Human Brain has the gene markers GPR149, CA8 with a NS-Forest FBeta value of 0.799748111s. + Chandelier - + - - + + - A Myofibroblasts in the Human Lung has the gene markers ASPN, DKK3, BCHE with a NS-Forest FBeta value of 0.48s. - Myofibroblasts + A L6b_6 in the Human Brain has the gene markers PCOLCE2, FAM160A1, SULF1 with a NS-Forest FBeta value of 0.570388349514563s. + L6b_6 - + - - + + - A DC2 in the Human Lung has the gene markers CLEC10A, HLA-DQA1 with a NS-Forest FBeta value of 0.53s. - DC2 + A L5/6 NP_4 in the Human Brain has the gene markers FSHR, CLMN, TLL1 with a NS-Forest FBeta value of 0.740632318501171s. + L5/6 NP_4 - + - - + + - A Pvalb_2 in the Human Brain has the gene markers BCHE, SEMA3C, GPC5 with a NS-Forest FBeta value of 0.7717391304347827s. - Pvalb_2 + A Pax6 in the Human Brain has the gene markers RELN, HCRTR2 with a NS-Forest FBeta value of 0.724125093s. + Pax6 - + - - + + - A Alveolar Mph MT-positive in the Human Lung has the gene markers HMOX1, HPGD with a NS-Forest FBeta value of 0.41s. - Alveolar Mph MT-positive + A L6b_6 in the Human Brain has the gene markers PCOLCE2, FAM160A1, SULF1 with a NS-Forest FBeta value of 0.570388349514563s. + L6b_6 - + - - + + - A Astro_4 in the Human Brain has the gene markers PPP1R3C, ETNPPL, ID4, OBI1-AS1 with a NS-Forest FBeta value of 0.47279792746113986s. - Astro_4 + A Endo in the Human Brain has the gene markers FLT1, ABCG2 with a NS-Forest FBeta value of 0.923892465s. + Endo - + - - + + - A L6b_3 in the Human Brain has the gene markers SLC15A5, ATP10A with a NS-Forest FBeta value of 0.6928969359331476s. - L6b_3 + A Pvalb_2 in the Human Brain has the gene markers BCHE, SEMA3C, GPC5 with a NS-Forest FBeta value of 0.7717391304347827s. + Pvalb_2 - + - - + + - A Vip_10 in the Human Brain has the gene markers ABI3BP, KCNG2, PARD3B with a NS-Forest FBeta value of 0.5405405405405405s. - Vip_10 + A L4 IT_3 in the Human Brain has the gene markers TMEM215, KCNH8, RORB with a NS-Forest FBeta value of 0.6151315789473684s. + L4 IT_3 - + - - + + - A Sst_22 in the Human Brain has the gene markers EPB41L4A, ITGA8, SST with a NS-Forest FBeta value of 0.4351032448377581s. - Sst_22 + A Pvalb_9 in the Human Brain has the gene markers PVALB, POSTN with a NS-Forest FBeta value of 0.5845323741007195s. + Pvalb_9 - + - - + + - A Sst_36 in the Human Brain has the gene markers TRDN, ITGA1, PARD3B, PLCH1 with a NS-Forest FBeta value of 0.6381381381381382s. - Sst_36 + A L2/3 IT_5 in the Human Brain has the gene markers GPX3, ADCYAP1, RMST with a NS-Forest FBeta value of 0.5061141304347826s. + L2/3 IT_5 - + - - + + - A Sst_34 in the Human Brain has the gene markers TTC29, TCF7L1 with a NS-Forest FBeta value of 0.565749235474006s. - Sst_34 + A Pvalb in the Human Brain has the gene markers PVALB, TAC1, MYO5B with a NS-Forest FBeta value of 0.691998764s. + Pvalb - + - - + + - A Sst_23 in the Human Brain has the gene markers NIBAN1, PROM1, THSD7B with a NS-Forest FBeta value of 0.6134686346863469s. - Sst_23 + A Vip_12 in the Human Brain has the gene markers SLC7A11, HCRTR2, EPS8 with a NS-Forest FBeta value of 0.5889057750759878s. + Vip_12 - + - - + + - A Sst_16 in the Human Brain has the gene markers LINC01630, DACH1, VAV3 with a NS-Forest FBeta value of 0.6000000000000001s. - Sst_16 + A Sst_8 in the Human Brain has the gene markers STK32A, SYT9, RELN with a NS-Forest FBeta value of 0.5061619718309859s. + Sst_8 - + - - + + - A Sncg in the Human Brain has the gene markers RXRG, THSD7B with a NS-Forest FBeta value of 0.628943702s. - Sncg + A L6 IT_1 in the Human Brain has the gene markers THEMIS, HOPX, MKX with a NS-Forest FBeta value of 0.6710122699386504s. + L6 IT_1 - + - - + + - A Micro/PVM in the Human Brain has the gene markers APBB1IP, DOCK8 with a NS-Forest FBeta value of 0.955105634s. - Micro/PVM + A Astro_2 in the Human Brain has the gene markers LINC01411, OBI1-AS1 with a NS-Forest FBeta value of 0.5566801619433198s. + Astro_2 - + - - + + - A AT2 in the Human Lung has the gene markers SFTPA1 with a NS-Forest FBeta value of 0.95s. - AT2 + A Lamp5 Lhx6 in the Human Brain has the gene markers CHST9, LAMP5 with a NS-Forest FBeta value of 0.821678322s. + Lamp5 Lhx6 - + - - + + - A Vip_29 in the Human Brain has the gene markers IQGAP2, KCNJ2, TAC1, MYO5B, VIP with a NS-Forest FBeta value of 0.49180327868852464s. - Vip_29 + A L5 IT_6 in the Human Brain has the gene markers NPFFR2, SULF2, RORB with a NS-Forest FBeta value of 0.6619822485207101s. + L5 IT_6 - + - - + + - A Pax6_2 in the Human Brain has the gene markers TGFBR2, BCHE, RELN with a NS-Forest FBeta value of 0.7676056338028169s. - Pax6_2 + A Vip_18 in the Human Brain has the gene markers NOX4, RXRG, NDST4 with a NS-Forest FBeta value of 0.38953488372093026s. + Vip_18 - + - - + + - A Vip_10 in the Human Brain has the gene markers ABI3BP, KCNG2, PARD3B with a NS-Forest FBeta value of 0.5405405405405405s. - Vip_10 + A Vip_6 in the Human Brain has the gene markers SMOC1, IQGAP2, PARD3B with a NS-Forest FBeta value of 0.5082179930795848s. + Vip_6 - + - - + + - A Pax6_3 in the Human Brain has the gene markers PBX3, PDLIM5, FBN2 with a NS-Forest FBeta value of 0.7090163934426228s. - Pax6_3 + A Pvalb_5 in the Human Brain has the gene markers SNTB1, COBLL1, GPR149, TAC1 with a NS-Forest FBeta value of 0.6364329268292682s. + Pvalb_5 - + - - + + - A Endo_1 in the Human Brain has the gene markers COLEC12, VWF, FLT1, ABCG2 with a NS-Forest FBeta value of 0.831353919239905s. - Endo_1 + A L6b_2 in the Human Brain has the gene markers NPFFR2, ROS1 with a NS-Forest FBeta value of 0.565711462450593s. + L6b_2 - + - - + + - A AT0 in the Human Lung has the gene markers HSD17B6, XIST, SCGB3A2 with a NS-Forest FBeta value of 0.28s. - AT0 + A Sncg_5 in the Human Brain has the gene markers COL5A2, TMEM47, MEGF11 with a NS-Forest FBeta value of 0.5214285714285715s. + Sncg_5 - + - - + + - A Lamp5 Lhx6 in the Human Brain has the gene markers CHST9, LAMP5 with a NS-Forest FBeta value of 0.821678322s. - Lamp5 Lhx6 + A Vip_19 in the Human Brain has the gene markers CBLN1, HTR2C, VIP with a NS-Forest FBeta value of 0.5353075170842825s. + Vip_19 - + - - + + - A Oligo_4 in the Human Brain has the gene markers OPALIN, TRIM59, CERCAM with a NS-Forest FBeta value of 0.5434782608695652s. - Oligo_4 + A Sst_29 in the Human Brain has the gene markers ENPP1, QRFPR, PIEZO2 with a NS-Forest FBeta value of 0.41353383458646614s. + Sst_29 - + - - + + - A Vip_8 in the Human Brain has the gene markers VWDE, WSCD1, DACH2 with a NS-Forest FBeta value of 0.3183962264150943s. - Vip_8 + A Vip_5 in the Human Brain has the gene markers LINC01630, IQGAP2, THSD4 with a NS-Forest FBeta value of 0.4801324503311257s. + Vip_5 - + - - + + - A Vip_16 in the Human Brain has the gene markers NDST4, SEMA3C, HTR2C, VIP with a NS-Forest FBeta value of 0.38s. - Vip_16 + A Lamp5_1 in the Human Brain has the gene markers ADAMTS20, KIT, FREM1 with a NS-Forest FBeta value of 0.48856548856548865s. + Lamp5_1 + + + + + + + + + + A Pax6_3 in the Human Brain has the gene markers PBX3, PDLIM5, FBN2 with a NS-Forest FBeta value of 0.7090163934426228s. + Pax6_3 diff --git a/clm-simple.json b/clm-simple.json index b48de38..262f1f7 100644 --- a/clm-simple.json +++ b/clm-simple.json @@ -13,9 +13,9 @@ "val" : "Cell Markers Ontology" }, { "pred" : "http://www.w3.org/2002/07/owl#versionInfo", - "val" : "2024-12-02" + "val" : "2024-12-12" } ], - "version" : "http://purl.obolibrary.org/obo/clm/releases/2024-12-02/clm-simple.json" + "version" : "http://purl.obolibrary.org/obo/clm/releases/2024-12-12/clm-simple.json" }, "nodes" : [ { "id" : "http://purl.obolibrary.org/obo/CLM_1000001", diff --git a/clm-simple.obo b/clm-simple.obo index 063cd37..164dbd1 100644 --- a/clm-simple.obo +++ b/clm-simple.obo @@ -1,9 +1,9 @@ format-version: 1.2 -data-version: clm/releases/2024-12-02/clm-simple.owl +data-version: clm/releases/2024-12-12/clm-simple.owl idspace: oboInOwl http://www.geneontology.org/formats/oboInOwl# idspace: terms http://purl.org/dc/terms/ ontology: clm/clm-simple -property_value: owl:versionInfo "2024-12-02" xsd:string +property_value: owl:versionInfo "2024-12-12" xsd:string property_value: terms:description "None" xsd:string property_value: terms:license https://creativecommons.org/licenses/unspecified property_value: terms:title "Cell Markers Ontology" xsd:string diff --git a/clm-simple.owl b/clm-simple.owl index 25a2398..1af825f 100644 --- a/clm-simple.owl +++ b/clm-simple.owl @@ -10,11 +10,11 @@ xmlns:terms="http://purl.org/dc/terms/" xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#"> - + None Cell Markers Ontology - 2024-12-02 + 2024-12-12 diff --git a/clm.json b/clm.json index cee4660..8dd1cf4 100644 --- a/clm.json +++ b/clm.json @@ -13,9 +13,9 @@ "val" : "Cell Markers Ontology" }, { "pred" : "http://www.w3.org/2002/07/owl#versionInfo", - "val" : "2024-12-02" + "val" : "2024-12-12" } ], - "version" : "http://purl.obolibrary.org/obo/clm/releases/2024-12-02/clm.json" + "version" : "http://purl.obolibrary.org/obo/clm/releases/2024-12-12/clm.json" }, "nodes" : [ { "id" : "http://identifiers.org/ensembl/ENSG00000006128", diff --git a/clm.obo b/clm.obo index 841834c..95aefdc 100644 --- a/clm.obo +++ b/clm.obo @@ -1,5 +1,5 @@ format-version: 1.2 -data-version: releases/2024-12-02 +data-version: releases/2024-12-12 idspace: dce http://purl.org/dc/elements/1.1/ idspace: dcterms http://purl.org/dc/terms/ idspace: oboInOwl http://www.geneontology.org/formats/oboInOwl# @@ -7,7 +7,7 @@ ontology: clm property_value: dcterms:description "None" xsd:string property_value: dcterms:license https://creativecommons.org/licenses/unspecified property_value: dcterms:title "Cell Markers Ontology" xsd:string -property_value: owl:versionInfo "2024-12-02" xsd:string +property_value: owl:versionInfo "2024-12-12" xsd:string [Term] id: CHEBI:24431 diff --git a/clm.owl b/clm.owl index 12c4991..718424f 100644 --- a/clm.owl +++ b/clm.owl @@ -11,11 +11,11 @@ xmlns:dcterms="http://purl.org/dc/terms/" xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#"> - + None Cell Markers Ontology - 2024-12-02 + 2024-12-12 diff --git a/src/ontology/imports/merged_import.owl b/src/ontology/imports/merged_import.owl index 28f4dfd..75a1b52 100644 --- a/src/ontology/imports/merged_import.owl +++ b/src/ontology/imports/merged_import.owl @@ -7,30 +7,104 @@ Prefix(rdfs:=) Ontology( - -Annotation(owl:versionInfo "2024-07-30") + +Annotation(owl:versionInfo "2024-12-12") +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -39,6 +113,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -48,6 +123,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -59,9 +135,10 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -73,12 +150,13 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -93,9 +171,11 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -118,6 +198,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -130,17 +211,25 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -150,6 +239,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -167,12 +257,18 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -182,6 +278,10 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -189,6 +289,8 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -197,6 +299,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -204,6 +307,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -223,6 +327,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -238,12 +343,14 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -257,14 +364,18 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -277,16 +388,20 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -309,6 +424,8 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -346,6 +463,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -361,13 +479,21 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -380,6 +506,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -391,21 +518,33 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -414,9 +553,9 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -424,6 +563,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -438,7 +578,11 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -449,6 +593,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -464,7 +609,9 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -477,30 +624,38 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -511,17 +666,24 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -539,9 +701,21 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -555,8 +729,10 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -565,22 +741,30 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -588,6 +772,8 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -595,6 +781,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -609,31 +796,95 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -652,7 +903,9 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -695,6 +948,8 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -725,10 +980,14 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -747,7 +1006,13 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -764,6 +1029,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -787,6 +1053,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -865,13 +1132,22 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -884,6 +1160,9 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -978,6 +1257,8 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -986,7 +1267,10 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -1002,14 +1286,11 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -1034,12 +1315,14 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -1064,13 +1347,11 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -1081,16 +1362,28 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -1103,6 +1396,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -1118,6 +1412,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -1155,6 +1450,8 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -1172,6 +1469,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -1199,12 +1497,17 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -1216,8 +1519,10 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -1225,10 +1530,15 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -1239,6 +1549,9 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -1247,6 +1560,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -1288,7 +1602,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -1326,6 +1639,9 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -1383,6 +1699,9 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -1396,6 +1715,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -1405,7 +1725,9 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -1419,9 +1741,22 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -1442,11 +1777,13 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -1469,6 +1806,9 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -1477,14 +1817,14 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -1503,10 +1843,9 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -1515,7 +1854,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -1527,6 +1865,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -1541,15 +1880,24 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -1559,23 +1907,53 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -1583,16 +1961,48 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -1611,6 +2021,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -1649,9 +2060,11 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -1665,6 +2078,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -1672,15 +2086,18 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -1695,9 +2112,12 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -1734,15 +2154,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -1758,6 +2169,9 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -1773,27 +2187,27 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -1808,6 +2222,9 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -1816,8 +2233,10 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -1853,16 +2272,21 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -1876,6 +2300,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -1919,10 +2344,9 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -1939,6 +2363,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -1990,6 +2415,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -2029,6 +2455,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -2044,6 +2471,9 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -2061,10 +2491,14 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -2095,6 +2529,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -2102,15 +2537,15 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -2149,11 +2584,20 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -2172,10 +2616,8 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -2190,17 +2632,26 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -2231,9 +2682,15 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -2249,6 +2706,9 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -2273,6 +2733,8 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -2313,8 +2775,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -2330,6 +2790,8 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -2355,6 +2817,18 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -2367,6 +2841,8 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -2415,6 +2891,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -2475,6 +2952,10 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -2498,13 +2979,17 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -2542,11 +3027,13 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -2578,6 +3065,10 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -2588,24 +3079,23 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -2625,13 +3115,16 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -2652,9 +3145,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -2662,10 +3152,18 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -2678,10 +3176,16 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -2698,16 +3202,25 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -2733,6 +3246,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -2755,9 +3269,11 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -2840,6 +3356,11 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -2987,8 +3508,13 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -3015,6 +3541,9 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -3028,12 +3557,15 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -3050,10 +3582,10 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -3092,6 +3624,10 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -3114,6 +3650,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -3122,10 +3659,10 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -3143,13 +3680,15 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -3158,7 +3697,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -3181,10 +3719,12 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -3192,6 +3732,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -3207,6 +3748,11 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -3221,6 +3767,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -3247,8 +3794,11 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -3258,23 +3808,29 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -3291,8 +3847,12 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -3302,9 +3862,14 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -3333,8 +3898,11 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -3353,6 +3921,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -3360,6 +3929,8 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -3369,6 +3940,10 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -3388,8 +3963,11 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -3424,6 +4002,9 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -3441,7 +4022,13 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -3452,12 +4039,10 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -3474,14 +4059,18 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -3503,6 +4092,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -3519,6 +4109,12 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -3526,6 +4122,9 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -3556,6 +4155,9 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -3565,9 +4167,10 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -3587,6 +4190,9 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -3596,6 +4202,13 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -3608,12 +4221,16 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -3627,6 +4244,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -3634,18 +4252,21 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -3671,6 +4292,9 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -3688,6 +4312,9 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -3699,13 +4326,18 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -3736,9 +4368,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -3751,6 +4380,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -3791,6 +4421,10 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -3809,6 +4443,9 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -3855,6 +4492,9 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -3878,6 +4518,9 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -3885,6 +4528,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -3899,10 +4543,15 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -3925,6 +4574,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -4014,6 +4664,9 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -4043,14 +4696,20 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -4093,6 +4752,9 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -4103,8 +4765,9 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -4147,7 +4810,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -4168,6 +4830,9 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -4181,10 +4846,16 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -4210,9 +4881,11 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -4233,6 +4906,8 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -4285,10 +4960,16 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -4311,6 +4992,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -4331,6 +5013,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -4343,15 +5026,26 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -4390,6 +5084,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -4414,7 +5109,9 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -4422,8 +5119,15 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -4431,10 +5135,14 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -4495,6 +5203,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -4512,10 +5221,12 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -4529,18 +5240,23 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -4578,6 +5294,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -4603,9 +5320,11 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -4656,7 +5375,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -4700,7 +5418,9 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -4718,39 +5438,64 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -4773,12 +5518,25 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -4790,6 +5548,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -4813,11 +5572,14 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -4841,7 +5603,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -4850,6 +5611,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -4857,6 +5619,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -4865,6 +5628,8 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -4883,14 +5648,20 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -4898,6 +5669,8 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -4912,6 +5685,9 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -4939,9 +5715,11 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -4967,10 +5745,25 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -4979,8 +5772,10 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -5003,9 +5798,12 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -5013,10 +5811,12 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -5025,12 +5825,14 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -5055,6 +5857,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -5069,14 +5872,13 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) -Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -5091,7 +5893,9 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -5126,14 +5930,31 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -5159,10 +5980,13 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -5182,6 +6006,8 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -5194,6 +6020,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -5203,17 +6030,25 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -5221,10 +6056,12 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -5234,6 +6071,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -5272,11 +6110,14 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -5290,6 +6131,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -5300,6 +6142,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -5326,12 +6169,15 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -5358,6 +6204,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -5366,6 +6213,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -5375,7 +6223,9 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -5389,7 +6239,6 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -5401,9 +6250,12 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -5429,6 +6281,8 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -5440,9 +6294,12 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -5454,6 +6311,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -5474,6 +6332,11 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -5485,6 +6348,11 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -5494,10 +6362,23 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -5510,42 +6391,51 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) -Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -5559,6 +6449,8 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -5567,9 +6459,11 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -5591,28 +6485,40 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -5626,6 +6532,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -5635,11 +6542,16 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -5655,6 +6567,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -5663,6 +6576,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -5672,9 +6586,15 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -5707,6 +6627,8 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -5714,6 +6636,8 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -5722,6 +6646,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -5736,10 +6661,13 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -5749,7 +6677,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -5771,6 +6699,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -5786,7 +6715,9 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -5798,6 +6729,8 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -5809,17 +6742,22 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -5830,11 +6768,13 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -5848,9 +6788,10 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) -Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -5861,12 +6802,14 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -5878,17 +6821,24 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -5902,11 +6852,17 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -5934,6 +6890,8 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -5950,7 +6908,10 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -5964,7 +6925,9 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -5973,6 +6936,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -5995,6 +6959,8 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -6009,8 +6975,11 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -6031,6 +7000,9 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -6040,16 +7012,21 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -6085,7 +7062,13 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -6100,6 +7083,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -6117,34 +7101,54 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -6162,6 +7166,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -6169,7 +7174,13 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -6182,11 +7193,23 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -6206,10 +7229,13 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -6222,11 +7248,25 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -6234,12 +7274,22 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -6260,12 +7310,17 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -6277,6 +7332,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -6316,10 +7372,15 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -6328,6 +7389,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -6358,8 +7420,13 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) @@ -6370,6 +7437,7 @@ Declaration(Class()) Declaration(Class()) Declaration(Class()) Declaration(Class()) +Declaration(Class()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) @@ -6389,6 +7457,7 @@ Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) +Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) @@ -6424,6 +7493,7 @@ Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) +Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) @@ -6495,6 +7565,7 @@ Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) +Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) Declaration(ObjectProperty()) @@ -6517,10 +7588,12 @@ Declaration(ObjectProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) +Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) +Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty()) Declaration(AnnotationProperty(rdfs:comment)) @@ -6763,7 +7836,6 @@ AnnotationAssertion(rdfs:label "resu AnnotationAssertion( "RO:0002592") AnnotationAssertion(rdfs:label "results in organization of") -SubObjectPropertyOf( ) # Object Property: (process has causal agent) @@ -6799,13 +7871,11 @@ AnnotationAssertion(rdfs:label "has AnnotationAssertion( "RO:0012003") AnnotationAssertion(rdfs:label "acts on population of") -SubObjectPropertyOf( ) # Object Property: (results in fusion of) AnnotationAssertion( "RO:0012008") AnnotationAssertion(rdfs:label "results in fusion of") -SubObjectPropertyOf( ) # Object Property: (anteriorly connected to) @@ -6914,31 +7984,241 @@ TransitiveObjectProperty( (TAC1) + +AnnotationAssertion(rdfs:label "TAC1") +SubClassOf( ) + +# Class: (STAB1) + +AnnotationAssertion(rdfs:label "STAB1") +SubClassOf( ) + +# Class: (TLL1) + +AnnotationAssertion(rdfs:label "TLL1") +SubClassOf( ) + # Class: (MSR1) AnnotationAssertion(rdfs:label "MSR1") SubClassOf( ) +# Class: (TNC) + +AnnotationAssertion(rdfs:label "TNC") +SubClassOf( ) + +# Class: (ROS1) + +AnnotationAssertion(rdfs:label "ROS1") +SubClassOf( ) + # Class: (TNIP3) AnnotationAssertion(rdfs:label "TNIP3") SubClassOf( ) +# Class: (HOMER3) + +AnnotationAssertion(rdfs:label "HOMER3") +SubClassOf( ) + +# Class: (FCGR2B) + +AnnotationAssertion(rdfs:label "FCGR2B") +SubClassOf( ) + +# Class: (BPIFB2) + +AnnotationAssertion(rdfs:label "BPIFB2") +SubClassOf( ) + +# Class: (KCNK2) + +AnnotationAssertion(rdfs:label "KCNK2") +SubClassOf( ) + +# Class: (SEMA5B) + +AnnotationAssertion(rdfs:label "SEMA5B") +SubClassOf( ) + # Class: (HMOX1) AnnotationAssertion(rdfs:label "HMOX1") SubClassOf( ) +# Class: (PVALB) + +AnnotationAssertion(rdfs:label "PVALB") +SubClassOf( ) + +# Class: (CHGA) + +AnnotationAssertion(rdfs:label "CHGA") +SubClassOf( ) + +# Class: (ACTA2) + +AnnotationAssertion(rdfs:label "ACTA2") +SubClassOf( ) + +# Class: (PRR4) + +AnnotationAssertion(rdfs:label "PRR4") +SubClassOf( ) + +# Class: (ST8SIA4) + +AnnotationAssertion(rdfs:label "ST8SIA4") +SubClassOf( ) + +# Class: (PLCH1) + +AnnotationAssertion(rdfs:label "PLCH1") +SubClassOf( ) + +# Class: (SMYD1) + +AnnotationAssertion(rdfs:label "SMYD1") +SubClassOf( ) + +# Class: (MYB) + +AnnotationAssertion(rdfs:label "MYB") +SubClassOf( ) + +# Class: (CCN2) + +AnnotationAssertion(rdfs:label "CCN2") +SubClassOf( ) + +# Class: (ONECUT2) + +AnnotationAssertion(rdfs:label "ONECUT2") +SubClassOf( ) + +# Class: (NPY) + +AnnotationAssertion(rdfs:label "NPY") +SubClassOf( ) + +# Class: (SFTPA1) + +AnnotationAssertion(rdfs:label "SFTPA1") +SubClassOf( ) + +# Class: (CHST8) + +AnnotationAssertion(rdfs:label "CHST8") +SubClassOf( ) + +# Class: (F13A1) + +AnnotationAssertion(rdfs:label "F13A1") +SubClassOf( ) + +# Class: (LAMP5) + +AnnotationAssertion(rdfs:label "LAMP5") +SubClassOf( ) + +# Class: (HIGD1B) + +AnnotationAssertion(rdfs:label "HIGD1B") +SubClassOf( ) + # Class: (AOC3) AnnotationAssertion(rdfs:label "AOC3") SubClassOf( ) +# Class: (TOP2A) + +AnnotationAssertion(rdfs:label "TOP2A") +SubClassOf( ) + +# Class: (GRP) + +AnnotationAssertion(rdfs:label "GRP") +SubClassOf( ) + +# Class: (HCRTR2) + +AnnotationAssertion(rdfs:label "HCRTR2") +SubClassOf( ) + +# Class: (SULF1) + +AnnotationAssertion(rdfs:label "SULF1") +SubClassOf( ) + +# Class: (POU2F3) + +AnnotationAssertion(rdfs:label "POU2F3") +SubClassOf( ) + +# Class: (NUSAP1) + +AnnotationAssertion(rdfs:label "NUSAP1") +SubClassOf( ) + # Class: (LUM) AnnotationAssertion(rdfs:label "LUM") SubClassOf( ) +# Class: (RXRG) + +AnnotationAssertion(rdfs:label "RXRG") +SubClassOf( ) + +# Class: (DPT) + +AnnotationAssertion(rdfs:label "DPT") +SubClassOf( ) + +# Class: (THSD7B) + +AnnotationAssertion(rdfs:label "THSD7B") +SubClassOf( ) + +# Class: (VIP) + +AnnotationAssertion(rdfs:label "VIP") +SubClassOf( ) + +# Class: (TAGLN) + +AnnotationAssertion(rdfs:label "TAGLN") +SubClassOf( ) + +# Class: (CHST9) + +AnnotationAssertion(rdfs:label "CHST9") +SubClassOf( ) + +# Class: (GLYATL2) + +AnnotationAssertion(rdfs:label "GLYATL2") +SubClassOf( ) + +# Class: (SST) + +AnnotationAssertion(rdfs:label "SST") +SubClassOf( ) + +# Class: (KIT) + +AnnotationAssertion(rdfs:label "KIT") +SubClassOf( ) + +# Class: (BSND) + +AnnotationAssertion(rdfs:label "BSND") +SubClassOf( ) + # Class: (CXCL5) AnnotationAssertion(rdfs:label "CXCL5") @@ -6949,6 +8229,21 @@ SubClassOf( "HPGD") SubClassOf( ) +# Class: (PCLAF) + +AnnotationAssertion(rdfs:label "PCLAF") +SubClassOf( ) + +# Class: (MS4A8) + +AnnotationAssertion(rdfs:label "MS4A8") +SubClassOf( ) + +# Class: (MYO5B) + +AnnotationAssertion(rdfs:label "MYO5B") +SubClassOf( ) + # Class: (SCARA5) AnnotationAssertion(rdfs:label "SCARA5") @@ -6959,11 +8254,156 @@ SubClassOf( "FABP4") SubClassOf( ) +# Class: (KCNK3) + +AnnotationAssertion(rdfs:label "KCNK3") +SubClassOf( ) + +# Class: (KRT15) + +AnnotationAssertion(rdfs:label "KRT15") +SubClassOf( ) + +# Class: (RRM2) + +AnnotationAssertion(rdfs:label "RRM2") +SubClassOf( ) + +# Class: (THEMIS) + +AnnotationAssertion(rdfs:label "THEMIS") +SubClassOf( ) + +# Class: (ANKRD36C) + +AnnotationAssertion(rdfs:label "ANKRD36C") +SubClassOf( ) + # Class: (CD248) AnnotationAssertion(rdfs:label "CD248") SubClassOf( ) +# Class: (GPR149) + +AnnotationAssertion(rdfs:label "GPR149") +SubClassOf( ) + +# Class: (UBE2C) + +AnnotationAssertion(rdfs:label "UBE2C") +SubClassOf( ) + +# Class: (ASCL3) + +AnnotationAssertion(rdfs:label "ASCL3") +SubClassOf( ) + +# Class: (ADAMTSL1) + +AnnotationAssertion(rdfs:label "ADAMTSL1") +SubClassOf( ) + +# Class: (CA8) + +AnnotationAssertion(rdfs:label "CA8") +SubClassOf( ) + +# Class: (C1orf194) + +AnnotationAssertion(rdfs:label "C1orf194") +SubClassOf( ) + +# Class: (ARSJ) + +AnnotationAssertion(rdfs:label "ARSJ") +SubClassOf( ) + +# Class: (C6orf58) + +AnnotationAssertion(rdfs:label "C6orf58") +SubClassOf( ) + +# Class: (POU3F1) + +AnnotationAssertion(rdfs:label "POU3F1") +SubClassOf( ) + +# Class: (DMBT1) + +AnnotationAssertion(rdfs:label "DMBT1") +SubClassOf( ) + +# Class: (RELN) + +AnnotationAssertion(rdfs:label "RELN") +SubClassOf( ) + +# Class: (APOD) + +AnnotationAssertion(rdfs:label "APOD") +SubClassOf( ) + +# Class: (NPSR1-AS1) + +AnnotationAssertion(rdfs:label "NPSR1-AS1") +SubClassOf( ) + +# Class: (LYPD2) + +AnnotationAssertion(rdfs:label "LYPD2") +SubClassOf( ) + +# Class: (PLCG2) + +AnnotationAssertion(rdfs:label "PLCG2") +SubClassOf( ) + +# Class: (PRC1) + +AnnotationAssertion(rdfs:label "PRC1") +SubClassOf( ) + +# Class: (RORB) + +AnnotationAssertion(rdfs:label "RORB") +SubClassOf( ) + +# Class: (COL5A2) + +AnnotationAssertion(rdfs:label "COL5A2") +SubClassOf( ) + +# Class: (AGER) + +AnnotationAssertion(rdfs:label "AGER") +SubClassOf( ) + +# Class: (SERPINB4) + +AnnotationAssertion(rdfs:label "SERPINB4") +SubClassOf( ) + +# Class: (MUC5AC) + +AnnotationAssertion(rdfs:label "MUC5AC") +SubClassOf( ) + +# Class: (LINC00298) + +AnnotationAssertion(rdfs:label "LINC00298") +SubClassOf( ) + +# Class: (PEG10) + +AnnotationAssertion(rdfs:label "PEG10") +SubClassOf( ) + +# Class: (LINC00507) + +AnnotationAssertion(rdfs:label "LINC00507") +SubClassOf( ) + # Class: () SubClassOf( ) @@ -6986,7 +8426,7 @@ AnnotationAssertion( "The definition of cell is intended to represent all cells, and thus a cell is defined as a material entity and not an anatomical structure, which implies that it is part of an organism (or the entirety of one).") AnnotationAssertion(rdfs:label "cell") SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) @@ -7041,6 +8481,7 @@ AnnotationAssertion( "ncithesaurus:Egg") AnnotationAssertion(rdfs:label "female germ cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -7063,9 +8504,8 @@ AnnotationAssertion( "oocyte") SubClassOf( ) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (oogonial cell) @@ -7109,6 +8549,14 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (glioblast) + +AnnotationAssertion(rdfs:label "glioblast") +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (neuroblast (sensu Vertebrata)) AnnotationAssertion(Annotation( "GOC:NV") Annotation( "http://en.wikipedia.org/wiki/Neuroblast") "A cell that will develop into a neuron often after a migration phase.") @@ -7117,16 +8565,18 @@ AnnotationAssertion( "neuroblast (sensu Vertebrata)") SubClassOf( ) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (stem cell) AnnotationAssertion(Annotation( "GOC:tfm") Annotation( "MESH:D013234") "A relatively undifferentiated cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells.") +AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-2086") AnnotationAssertion( "FMA:63368") AnnotationAssertion(rdfs:comment "This term applies to metazoan. For plant stem cells, consider using PO:0004011 ‘initial cell’ or its parent PO:0004010 ‘meristematic cell’.") AnnotationAssertion(rdfs:label "stem cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -7140,9 +8590,16 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (epithelial fate stem cell) + +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "epithelial fate stem cell") +SubClassOf( ) + # Class: (hematopoietic stem cell) AnnotationAssertion(Annotation( "GOC:add") Annotation( "GOC:dsd") Annotation( "GOC:tfm") Annotation( "PMID:19022770") Annotation( "http://en.wikipedia.org/wiki/Hematopoietic_stem_cell") "A stem cell from which all cells of the lymphoid and myeloid lineages develop, including blood cells and cells of the immune system. Hematopoietic stem cells lack cell markers of effector cells (lin-negative). Lin-negative is defined by lacking one or more of the following cell surface markers: CD2, CD3 epsilon, CD4, CD5 ,CD8 alpha chain, CD11b, CD14, CD19, CD20, CD56, ly6G, ter119.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0000725") AnnotationAssertion( "CALOHA:TS-0448") AnnotationAssertion( "FMA:86475") @@ -7196,6 +8653,7 @@ AnnotationAssertion(rdfs:label "mono EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -7214,6 +8672,7 @@ SubClassOf( ObjectSomeValuesFrom( (common myeloid progenitor) AnnotationAssertion(Annotation( "GOC:add") Annotation( "ISBN:0878932437") Annotation( "MESH:D023461") "A progenitor cell committed to myeloid lineage, including the megakaryocyte and erythroid lineages.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0004730") AnnotationAssertion(rdfs:comment "This cell type is intended to be compatible with any vertebrate common myeloid progenitor. For mammalian CMP known to be CD34-positive, please use the term 'common myeloid progenitor, CD34-positive' (CL_0001059).") AnnotationAssertion(rdfs:label "common myeloid progenitor") @@ -7225,6 +8684,7 @@ DisjointClasses( (megakaryocyte-erythroid progenitor cell) AnnotationAssertion(Annotation( "GOC:add") Annotation( "GOC:dsd") Annotation( "GOC:tfm") Annotation( "MESH:D055015") Annotation( "PMID:16647566") Annotation( "http://en.wikipedia.org/wiki/Megakaryocyte-erythroid_progenitor_cell") "A progenitor cell committed to the megakaryocyte and erythroid lineages.") +AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "MEPs are reportedly CD19-negative, CD34-negative, CD45RA-negative, CD110-positive, CD117-positive, and SCA1-negative and reportedly express the transcription factors GATA-1 and NF-E2.") AnnotationAssertion(rdfs:label "megakaryocyte-erythroid progenitor cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) @@ -7239,6 +8699,7 @@ DisjointClasses( (common lymphoid progenitor) AnnotationAssertion(Annotation( "GOC:add") Annotation( "GOC:dsd") Annotation( "GOC:tfm") Annotation( "PMID:10407577") Annotation( "PMID:16551251") "A oligopotent progenitor cell committed to the lymphoid lineage.") +AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "CLP are CD7-positive, CD10-positive, CD19-negative, CD34-positive, CD45RA-positive, CD79a-negative, CD127-positive, AA4.1-positive, RAG-negative, Sca-1-low, sIgM-negative, sIgD-negative, TdT-negative, Vpre-B-negative, and pre-BCR-negative. Expression of transcription factors include E2A-positive, EBF-positive, Ikaros-negative, PU.1-negative, and Pax5-negative.") AnnotationAssertion(rdfs:label "common lymphoid progenitor") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) @@ -7276,6 +8737,7 @@ SubClassOf( (fibroblast) AnnotationAssertion(Annotation( "ISBN:0517223651") Annotation( "MESH:D005347") Annotation( "http://en.wikipedia.org/wiki/Fibroblast") "A connective tissue cell which secretes an extracellular matrix rich in collagen and other macromolecules. Flattened and irregular in outline with branching processes; appear fusiform or spindle-shaped.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0000452") AnnotationAssertion( "CALOHA:TS-0362") AnnotationAssertion( "FMA:63877") @@ -7306,19 +8768,21 @@ AnnotationAssertion( "XAO:0000031") AnnotationAssertion(rdfs:label "ciliated cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (epithelial cell) AnnotationAssertion(Annotation( "FB:ma") Annotation( "GOC:tfm") Annotation( "MESH:D004847") "A cell that is usually found in a two-dimensional sheet with a free surface. The cell has a cytoskeleton that allows for tight cell to cell contact and for cell polarity where apical part is directed towards the lumen and the basal part to the basal lamina.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0000414") AnnotationAssertion( "CALOHA:TS-2026") AnnotationAssertion( "CARO:0000077") AnnotationAssertion( "FMA:66768") AnnotationAssertion( "WBbt:0003672") AnnotationAssertion(rdfs:label "epithelial cell") -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) @@ -7347,39 +8811,54 @@ SubClassOf( (blood vessel endothelial cell) AnnotationAssertion(Annotation( "GOC:tfm") "An endothelial cell that lines the vasculature.") +AnnotationAssertion( ) AnnotationAssertion(rdfs:label "blood vessel endothelial cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (columnar/cuboidal epithelial cell) AnnotationAssertion(Annotation( "GO:0002065") Annotation( "https://orcid.org/0000-0001-5208-3432") "A columnar/cuboidal epithelial cell is a cell usually found in a two dimensional sheet with a free surface. Columnar/cuboidal epithelial cells take on the shape of a column or cube.") +AnnotationAssertion( ) AnnotationAssertion(rdfs:label "columnar/cuboidal epithelial cell") SubClassOf( ) # Class: (squamous epithelial cell) +AnnotationAssertion(Annotation( "FBC:Autogenerated") "Any epithelial cell that is part of some squamous epithelium.") AnnotationAssertion( "CALOHA:TS-1249") AnnotationAssertion(rdfs:label "squamous epithelial cell") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (mesothelial cell) -AnnotationAssertion(Annotation( "GOC:tfm") Annotation( "ISBN:0721662544") "A flattened epithelial cell of mesenchymal origin that lines the serous cavity.") +AnnotationAssertion(Annotation( "GOC:tfm") Annotation( "ISBN:0721662544") Annotation( "PMID:26106328") "A flat, squamous-like epithelial cell of mesodermal origin. It forms the mesothelium, which lines the body's serous cavities including the pleural, peritoneal, and pericardial spaces. This cell plays a crucial role in synthesizing and secreting lubricants, such as glycosaminoglycans and surfactants, which minimize friction between adjacent tissues during movement.") +AnnotationAssertion( ) AnnotationAssertion( "FMA:66773") +AnnotationAssertion(Annotation( "PMID:26106328") rdfs:comment "Mesothelial cells, which morphologically resemble squamous epithelial cells, express both epithelial markers (cytokeratins) and mesenchymal markers (vimentin), reflecting their mesodermal origin. They feature surface microvilli and apical-basal polarity. Under certain conditions, they can undergo mesothelial-to-mesenchymal transition. These cells also produce extracellular matrix proteins, maintain serosal homeostasis, and facilitate fluid transport.") AnnotationAssertion(rdfs:label "mesothelial cell") SubClassOf( ) SubClassOf( ) SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (stratified epithelial cell) + +AnnotationAssertion(Annotation( "Wikipedia:Epithelium") Annotation( "doi:/10.1016/B978-0-12-410424-2.00003-2") Annotation( "https://www.biologyonline.com/dictionary/stratified-epithelium") "An epithelial cell, organized into multiple layers, with only the basal layer being in contact with the basement membrane.") +AnnotationAssertion(rdfs:label "stratified epithelial cell") +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (circulating cell) AnnotationAssertion(Annotation( "GOC:add") "A cell which moves among different tissues of the body, via blood, lymph, or other medium.") AnnotationAssertion(rdfs:label "circulating cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (blood cell) @@ -7413,6 +8892,7 @@ SubClassOf( ObjectSomeValuesFrom( (T cell) AnnotationAssertion(Annotation( "GOC:add") Annotation( "GOC:tfm") Annotation( "ISBN:0781735149") "A type of lymphocyte whose defining characteristic is the expression of a T cell receptor complex.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0000782") AnnotationAssertion( "CALOHA:TS-1001") AnnotationAssertion( "FMA:62870") @@ -7437,6 +8917,7 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -7450,6 +8931,7 @@ SubClassOf( ObjectSomeValuesFrom( (granulocyte) AnnotationAssertion(Annotation( "GOC:amm") Annotation( "GOC:tfm") Annotation( "MESH:D006098") Annotation( "http://en.wikipedia.org/wiki/Granulocyte") "A leukocyte with abundant granules in the cytoplasm.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0000539") AnnotationAssertion( "BTO:0001026") AnnotationAssertion( "CALOHA:TS-0422") @@ -7458,6 +8940,7 @@ AnnotationAssertion(rdfs:label "gran EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -7487,6 +8970,7 @@ SubClassOf( (interneuron) AnnotationAssertion(Annotation( "GOC:tfm") Annotation( "MESH:D007395") "Most generally any neuron which is not motor or sensory. Interneurons may also refer to neurons whose axons remain within a particular brain region as contrasted with projection neurons which have axons projecting to other brain regions.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0003811") AnnotationAssertion( "FMA:67313") AnnotationAssertion( "WBbt:0005113") @@ -7496,6 +8980,7 @@ SubClassOf( (motor neuron) AnnotationAssertion(Annotation( "MESH:D009046") Annotation( "PMID:16875686") "An efferent neuron that passes from the central nervous system or a ganglion toward or to a muscle and conducts an impulse that causes or inhibits movement.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0000312") AnnotationAssertion( "FMA:83617") AnnotationAssertion( "WBbt:0005409") @@ -7505,6 +8990,7 @@ SubClassOf( (sensory neuron) AnnotationAssertion(Annotation( "ISBN:0721662544") "Any neuron having a sensory function; an afferent neuron conveying sensory impulses.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0001037") AnnotationAssertion( "FMA:84649") AnnotationAssertion( "MESH:D011984") @@ -7514,6 +9000,15 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (multipolar neuron) + +AnnotationAssertion(Annotation( "FMA:67287") Annotation( "GOC:tfm") "A neuron with three or more neurites, usually an axon and multiple dendrites.") +AnnotationAssertion( "FMA:67287") +AnnotationAssertion(rdfs:label "multipolar neuron") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (autonomic neuron) AnnotationAssertion(Annotation( "GOC:tfm") "A neuron whose cell body is within an autonomic ganglion.") @@ -7526,15 +9021,29 @@ SubClassOf( ObjectSomeValuesFrom( (mononuclear phagocyte) AnnotationAssertion(Annotation( "GOC:add") Annotation( "GOC:tfm") Annotation( "ISBN:0781735149") "A vertebrate phagocyte with a single nucleus.") +AnnotationAssertion( ) +AnnotationAssertion(Annotation( "DOI:10.1016/j.coi.2005.11.008") Annotation( "DOI:10.1038/nri3087") Annotation( "DOI:10.3389/fimmu.2019.01893") "This extended description was generated by ChatGPT and reviewed by the CellGuide team, who added references, and by the CL editors, who approved it for inclusion in CL. It may contain information that applies to only to some subtypes and species, and so should not be considered definitional. + +Mononuclear phagocytes are immune cells that form a critical part of the body's innate immune system, the body's first line of defense against infections. Mononuclear phagocytes are characterized by the presence of a single, large nucleus. The ‘Mononuclear Phagocyte System’ nomenclature was introduced to distinguish mononuclear monocytes and macrophages from other cells with multiple nuclei. However, the cells within the mononuclear phagocyte system represent a highly heterogeneous group, all of which are able to perform highly efficient phagocytosis - engulfing and digesting microbes and cellular debris to fight infections and to maintain normal tissue homeostasis. +In addition to phagocytosis, mononuclear phagocytes also secrete chemical compounds to recruit other immune cells to a site of infection. These cells produce different types of signaling molecules, including cytokines, chemokines, and reactive oxygen species, triggering a cascade of responses to ensure rapid and efficient containment and neutralization of invading pathogens. These cells are also involved in antigen presentation, a process essential for stimulating an adaptive immune response. They can process and present antigens to T cells, thereby linking the innate and adaptive immune responses. +Mononuclear phagocytes play key roles in tissue repair and remodeling. After infection or injury, these cells help in the clearance of dead cells and debris, a crucial step in the initiation of tissue remodeling and the resolution of inflammation. Overall, mononuclear phagocytes are versatile cells that have tailored their functions to meet the unique challenges of different tissues within the body. They are pivotal in homeostasis, immunity, and inflammation, making them important aspects in a range of human diseases including infection, autoimmunity, and cancer.") AnnotationAssertion( "BTO:0001433") +AnnotationAssertion( "https://cellxgene.cziscience.com/cellguide/CL_0000113") AnnotationAssertion(rdfs:label "mononuclear phagocyte") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) +# Class: (surface ectodermal cell) + +AnnotationAssertion( "FMA:72552") +AnnotationAssertion(rdfs:label "surface ectodermal cell") +SubClassOf( ) + # Class: (endothelial cell) AnnotationAssertion(Annotation( "GOC:tfm") Annotation( "MESH:D042783") Annotation( "PMID:21275341") Annotation( "http://en.wikipedia.org/wiki/Endothelial_cell") Annotation( "https://sourceforge.net/tracker/?func=detail&atid=440764&aid=3364936&group_id=36855") "An endothelial cell comprises the outermost layer or lining of anatomical structures and can be squamous or cuboidal. In mammals, endothelial cell has vimentin filaments and is derived from the mesoderm.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0001176") AnnotationAssertion( "CALOHA:TS-0278") AnnotationAssertion( "FMA:66772") @@ -7542,6 +9051,7 @@ AnnotationAssertion(rdfs:comment "Fr AnnotationAssertion(rdfs:label "endothelial cell") SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (CNS neuron (sensu Vertebrata)) @@ -7552,16 +9062,70 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (cerebellar Golgi cell) + +AnnotationAssertion(Annotation( "NIFSTD:sao1415726815") "Large intrinsic neuron located in the granule layer of the cerebellar cortex that extends its dendrites into the molecular layer where they receive contact from parallel fibers. The axon of the Golgi cell ramifies densely in the granule layer and enters into a complex arrangement with mossy fiber terminals and granule cell dendrites to form the cerebellar glomerulus. Llinas, Walton and Lang. In The Synaptic Organization of the Brain. 5th ed. 2004.") +AnnotationAssertion( "MESH:D000080906") +AnnotationAssertion(rdfs:label "cerebellar Golgi cell") +SubClassOf( ) + +# Class: (granule cell) + +AnnotationAssertion(Annotation( ) "A neuron of the vertebrate central nervous system that is small in size. This general class includes small neurons in the granular layer of the cerebellar cortex, cerebral cortex neurons that are not pyramidal cells and small neurons without axons found in the olfactory bulb.") +AnnotationAssertion( "BTO:0003393") +AnnotationAssertion(rdfs:label "granule cell") +SubClassOf( ) + +# Class: (neuron associated cell (sensu Vertebrata)) + +AnnotationAssertion(rdfs:label "neuron associated cell (sensu Vertebrata)") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (glial cell) AnnotationAssertion(Annotation( "MESH:D009457") "A non-neuronal cell of the nervous system. They not only provide physical support, but also respond to injury, regulate the ionic and chemical composition of the extracellular milieu. Guide neuronal migration during development, and exchange metabolites with neurons.") +AnnotationAssertion( ) +AnnotationAssertion(Annotation( "DOI:10.1002/glia.24343") Annotation( "DOI:10.1038/nn1988") Annotation( "DOI:10.1101/cshperspect.a020602") Annotation( "DOI:10.1126/science.aat0473") Annotation( "DOI:10.3389/fncel.2017.00024") "This extended description was generated by ChatGPT and reviewed by the CellGuide team, who added references, and by the CL editors, who approved it for inclusion in CL. It may contain information that applies to only to some subtypes and species, and so should not be considered definitional. + +Glial cells, also known as neuroglia or simply glia, are non-neuronal cells in the central and peripheral nervous systems that provide support and protection for neurons. They constitute approximately half of the total cells in the human brain and more than half in other parts of the nervous system. Glial cells perform several key functions including, but not limited to, maintaining homeostasis, forming the myelin sheath around the neuron axons, and providing support and nutrition to neurons. +These different functions are performed by various glial cell types, including astrocytes, oligodendrocytes, microglia and other specialized types. Astrocytes, for example, are the most abundant glial cells and provide metabolic and nutrient support to neurons, help regulate the extracellular ion and neurotransmitter levels, and play a role in the formation and maintenance of the blood-brain barrier, contributing to the overall homeostasis and functioning of the nervous system. Additionally, astrocytes are involved in synaptic communication and participate in processes such as synaptogenesis and synaptic pruning. +Oligodendrocytes in the central nervous system function to insulate neurons by producing a fatty substance known as myelin. The myelin sheath enhances the speed and efficiency of nerve impulse conduction along the axons. +Microglia, the immune cells of the central nervous system, protect neurons from pathogens and clear away dead neurons through phagocytosis, a process also known as cellular eating. They also contribute to the regulation of inflammation in response to signals of tissue damage or infection in the central nervous system by releasing cytokines and other signaling molecules that modulate the immune response. +Despite their overarching function in the support and protection of neurons, glial cells have also been shown to play significant roles in the pathophysiology of many psychiatric and neurodegenerative diseases, such as Alzheimer’s, Parkinson’s Disease and multiple sclerosis.") AnnotationAssertion( "BTO:0002606") AnnotationAssertion( "CALOHA:TS-0415") AnnotationAssertion( "FMA:54536") +AnnotationAssertion( "https://cellxgene.cziscience.com/cellguide/CL_0000125") AnnotationAssertion(rdfs:comment "Not all glial cells develop from glioblasts, with microglia developing from the mesoderm instead. See https://github.com/obophenotype/cell-ontology/issues/1571") AnnotationAssertion(rdfs:label "glial cell") SubClassOf( ) +# Class: (macroglial cell) + +AnnotationAssertion(Annotation( "GOC:tfm") Annotation( "ISBN:0721662544") "A neuroglial cell of ectodermal origin, i.e., the astrocytes and oligodendrocytes considered together.") +AnnotationAssertion( "BTO:0000771") +AnnotationAssertion( "CALOHA:TS-2027") +AnnotationAssertion( "FMA:54538") +AnnotationAssertion(rdfs:label "macroglial cell") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (oligodendrocyte) + +AnnotationAssertion(Annotation( "MESH:D009836") Annotation( "http://en.wikipedia.org/wiki/Oligodendrocyte") "A class of large neuroglial (macroglial) cells in the central nervous system. Form the insulating myelin sheath of axons in the central nervous system.") +AnnotationAssertion( ) +AnnotationAssertion( "BTO:0000962") +AnnotationAssertion( "CALOHA:TS-0709") +AnnotationAssertion( "FMA:54540") +AnnotationAssertion(rdfs:comment "Oligodendrocytes are reportedly MDP-positive and CD4-negative.") +AnnotationAssertion(rdfs:label "oligodendrocyte") +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (neurectodermal cell) AnnotationAssertion(Annotation( "GOC:tfm") Annotation( "ISBN:068340007X") "Ectoderm destined to be nervous tissue.") @@ -7582,6 +9146,7 @@ SubClassOf( (adipocyte) AnnotationAssertion(Annotation( "MESH:D017667") "A fat-storing cell found mostly in the abdominal cavity and subcutaneous tissue of mammals. Fat is usually stored in the form of triglycerides.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0000443") AnnotationAssertion( "CALOHA:TS-0012") AnnotationAssertion( "FMA:63880") @@ -7619,6 +9184,23 @@ AnnotationAssertion( "pigment cell") SubClassOf( ) +# Class: (melanocyte) + +AnnotationAssertion(Annotation( "SANBI:mhl") "A pigment cell derived from the neural crest. Contains melanin-filled pigment granules, which gives a brown to black appearance.") +AnnotationAssertion( ) +AnnotationAssertion( "BTO:0000847") +AnnotationAssertion( "CALOHA:TS-0613") +AnnotationAssertion( "FMA:70545") +AnnotationAssertion( "MESH:D008544") +AnnotationAssertion( "VHOG:0001679") +AnnotationAssertion(rdfs:label "melanocyte") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (visual pigment cell) AnnotationAssertion(rdfs:label "visual pigment cell") @@ -7651,6 +9233,7 @@ AnnotationAssertion( "exocrine cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (glycosaminoglycan secreting cell) @@ -7679,6 +9262,7 @@ SubClassOf( ObjectSomeValuesFrom( (club cell) AnnotationAssertion(Annotation( "DOI:10.1183/09031936.00146609") Annotation( "DOI:10.1378/chest.12-2762") Annotation( "GOC:tfm") Annotation( "PMID:28128362") Annotation( "PMID:29874100") Annotation( "PMID:7905712") "A non-mucous, epithelial secretory cell that is part of the tracheobronchial tree. A club cell has short microvilli but no cilia. A club cell is able to multiply and differentiate into ciliated cells to regenerate the bronchiolar epithelium and it also protects the tracheobronchial epithelium.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0004811") AnnotationAssertion( "FMA:14119") AnnotationAssertion(rdfs:label "club cell") @@ -7692,22 +9276,48 @@ SubClassOf( ObjectSomeValuesFrom( "seromucus secreting cell") SubClassOf( ) +# Class: (goblet cell) + +AnnotationAssertion(Annotation( "MESH:D020397") Annotation( "http://en.wikipedia.org/wiki/Goblet_cell") "A specialized, columnar, mucus secreting epithelial cell shaped like a flask or goblet. A narrow basal end contains the nucleus while the apical end is swollen by the accumulation of mucus laden secretory granules. Short microvilli project from the apical plasma membrane.") +AnnotationAssertion(Annotation( "DOI:10.1016/S1357-2725(02)00083-3") Annotation( "DOI:10.1038/s41575-022-00675-x") Annotation( "DOI:10.1165/ajrcmb.25.5.f218") Annotation( "DOI:10.1242/bio.20121701") Annotation( "https://www.ncbi.nlm.nih.gov/books/NBK553208/") "This extended description was generated by ChatGPT and reviewed by the CellGuide team, who added references, and by the CL editors, who approved it for inclusion in CL. It may contain information that applies to only to some subtypes and species, and so should not be considered definitional. + +Goblet cells are specialized, simple columnar, secretory epithelial cells that are mostly found in the respiratory and intestinal tracts. The term \"goblet\" refers to their shape, which resembles a flask or goblet, specially at their apical end which is swollen due to the accumulation of secretory granules. +The primary function of goblet cells is to to protect and lubricate the underlying tissues by secreting large quantities of mucin, a complex glycoprotein, which forms mucus when hydrated. In the respiratory tract, the mucus secreted by these cells traps dust, bacteria, viruses, and other potentially harmful particles in the inhaled air, preventing them from reaching the delicate tissues of the lungs. In the intestines, the goblet cells secrete mucus that acts as a protective barrier shielding the intestinal epithelium from dietary antigens, pathogens and prevents the intestinal epithelium from being eroded by the actions of the digestive enzymes and the abrasive action of passing food material. +Goblet cells are capable of rapidly altering their secretory output in response to stimuli. For example, irritants like smoke or dust can trigger an increased rate of mucus production, as the body attempts to flush out the harmful particles. Conversely, in conditions such as chronic bronchitis and cystic fibrosis, overactive goblet cells can create a thick accumulation of mucus that obstructs the airways and fosters bacterial growth. Lastly, goblet cells are not static, rather, they undergo a dynamic process known as goblet cell metaplasia-differentiation, wherein non-goblet cells in response to chronic injury or inflammation, can differentiate into goblet cells leading to an accumulation of these cells in the tissue, known as goblet cell hyperplasia.") +AnnotationAssertion( "BTO:0001540") +AnnotationAssertion( "FMA:13148") +AnnotationAssertion( "http://en.wikipedia.org/wiki/Goblet_cell") +AnnotationAssertion( "https://cellxgene.cziscience.com/cellguide/CL_0000160") +AnnotationAssertion(rdfs:label "goblet cell") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (endocrine cell) AnnotationAssertion(Annotation( "MESH:D055098") "A cell of an endocrine gland, ductless glands that secrete substances which are released directly into the circulation and which influence metabolism and other body functions.") +AnnotationAssertion( ) AnnotationAssertion( "FMA:83809") AnnotationAssertion(rdfs:label "endocrine cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( ))))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( )))) # Class: (enteroendocrine cell) AnnotationAssertion(Annotation( "GOC:tfm") Annotation( "SANBI:mhl") "An endocrine cell that is located in the epithelium of the gastrointestinal tract or in the pancreas.") +AnnotationAssertion(Annotation( "DOI:10.1038/s41574-019-0168-8") Annotation( "DOI:10.1111/j.1463-1326.2011.01438.x") Annotation( "DOI:10.1196/annals.1294.001") Annotation( "DOI:10.1210/endrev/bnaa018") Annotation( "DOI:10.7554/elife.78512") "This extended description was generated by ChatGPT and reviewed by the CellGuide team, who added references, and by the CL editors, who approved it for inclusion in CL. It may contain information that applies to only to some subtypes and species, and so should not be considered definitional. + +Enteroendocrine cells are a specialized subset of cells located within the epithelial lining of both the small and large intestines, as well as the stomach and pancreas. Constituting less than 1% of the total population of intestinal cells, they are differentiated from a common intestinal cell progenitor, thus sharing lineage with absorptive and goblet cells of the intestines. +The distinct characteristic feature of an enteroendocrine cell is its inherent capacity to synthesize and secrete a plethora of gut hormones such as serotonin, somatostatin, neurotensin, cholecystokinin, secretin, gastric inhibitory peptide, motilin, and glucagon-like peptide-1. Integrated within this complex network of signaling agents, these substances control various aspects of the digestive system. Each enteroendocrine cell has its unique combination of hormones to release, determined by its position along the intestinal tract. Intriguingly, these hormones not only modulate local gut function, including motility, absorption and secretion, but also potentiate distant actions on other systems such as endocrine, nervous and immune and play a role in the feeling of satiety. +The release of these hormones from enteroendocrine cells is a highly regulated and dynamic process. The cells are equipped with sensory receptors localized on its luminal side that respond to various stimuli, including changes in nutrient composition, chemical or mechanical changes in the gut lumen, or even signals arising from commensal microbiota. This sensory input stimulates a signaling cascade within the cell, culminating in the release of specific hormones into the interstitial fluid. These hormones then make their way into the bloodstream, acting on their respective target receptors to mediate their duties. The multifunctional characteristics of enteroendocrine cells make them crucial for maintaining gut homeostasis and the overall physiological well being of the body.") AnnotationAssertion( "BTO:0003865") AnnotationAssertion( "FMA:62930") AnnotationAssertion( "MESH:D019858") +AnnotationAssertion( "https://cellxgene.cziscience.com/cellguide/CL_0000164") AnnotationAssertion(rdfs:label "enteroendocrine cell") SubClassOf( ) SubClassOf( ) @@ -7715,6 +9325,7 @@ SubClassOf( (neuroendocrine cell) AnnotationAssertion(Annotation( "MESH:D055099") "A neuron that is capable of some hormone secretion in response to neuronal signals.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0002691") AnnotationAssertion( "FMA:83810") AnnotationAssertion(Annotation( "PMID:5342440") Annotation( "https://www.clinicalkey.com/#!/content/book/3-s2.0-B9780323555968000073") rdfs:comment "The neurosecretory cell is neither an ordinary neuron nor an endocrine cell, but a combination of both. Its neuronal features resemble those of ordinary neurons concerning both structure and function. The production of a visible secretory material marks the neurosecretory neuron as a gland cell, and the fact that extractable cellular products act in the manner of hormones places it in the realm of endocrine elements. @@ -7742,11 +9353,13 @@ AnnotationAssertion(rdfs:label "insu EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (type B pancreatic cell) AnnotationAssertion(Annotation( "GOC:tfm") Annotation( "ISBN:0517223651") Annotation( "http://en.wikipedia.org/wiki/Pancreatic_b_cell") "A cell that secretes insulin and is located towards the center of the islets of Langerhans.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0000783") AnnotationAssertion( "EV:0200009") AnnotationAssertion( "FMA:70586") @@ -7772,6 +9385,7 @@ SubClassOf( ObjectSomeValuesFrom( (pancreatic A cell) AnnotationAssertion(Annotation( "GOC:tfm") Annotation( "ISBN:0721662544") "A type of enteocrine cell found in the periphery of the islets of Langerhans that secretes glucagon.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0000990") AnnotationAssertion( "FMA:70585") AnnotationAssertion( "MESH:D050416") @@ -7793,6 +9407,7 @@ SubClassOf( ObjectSomeValuesFrom( (pancreatic D cell) AnnotationAssertion(Annotation( "FMA:0517223651") Annotation( "GOC:tfm") "A D cell located in the pancreas. Peripherally placed within the islets like type A cells; contains somatostatin.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0000803") AnnotationAssertion( "FMA:70587") AnnotationAssertion(rdfs:label "pancreatic D cell") @@ -7813,9 +9428,17 @@ SubClassOf( ObjectSomeValuesFrom( (hepatocyte) AnnotationAssertion(Annotation( "GOC:tfm") Annotation( "ISBN:0412046911") Annotation( "MESH:D022781") Annotation( "PMID:19717280") Annotation( "http://en.wikipedia.org/wiki/Hepatocyte") "The main structural component of the liver. They are specialized epithelial cells that are organized into interconnected plates called lobules. Majority of cell population of liver, polygonal in shape, arranged in plates or trabeculae between sinusoids; may have single nucleus or binucleated.") +AnnotationAssertion( ) +AnnotationAssertion(Annotation( "DOI:10.1016/j.biocel.2011.11.011") Annotation( "DOI:10.1055/s-2007-1007096") Annotation( "DOI:10.1083/jcb.201903090") Annotation( "DOI:10.1111/j.1439-0396.2007.00752.x") "This extended description was generated by ChatGPT and reviewed by the CellGuide team, who added references, and by the CL editors, who approved it for inclusion in CL. It may contain information that applies to only to some subtypes and species, and so should not be considered definitional. + +Hepatocytes are the major cell type constituting 70-80% of the liver's cytoplasmic mass, playing crucial roles in maintaining the body's metabolic homeostasis. Dimensions of mature hepatocytes typically range from 20 to 30 μm in humans, but size may vary depending on their location within the liver lobule. Hepatocytes are characterized by high biosynthetic, enzymatic, and endocytic activity. They contain abundant mitochondria, smooth and rough endoplasmic reticulum, peroxisomes, lysosomes, and a large nucleus that is often binucleate. +The liver consists of three zones - the periportal Zone 1, midzone 2, and pericentral Zone 3 - which have differential nutrient and oxygen status, and damage susceptibility; hepatocytes in the different zones show signifcant functional heterogeneity ('hepatocyte functional zonation'). Hepatocytes are involved in a multitude of critical functions including the metabolism of lipids, carbohydrates, and proteins, the synthesis of serum proteins (e.g., albumin, transferrin, and lipoproteins), the detoxification and excretion of endogenous and exogenous substances, the storage of vitamins and minerals, and the production and secretion of bile. +Heterocytes demonstrate a remarkable regenerative capacity, which enables the liver to recover from injury and loss of tissue mass. Notably, hepatocytes perform biotransformation with both phase I and phase II enzymes, which modify drugs, xenobiotics, and various substances for elimination from the body. Phase I enzymes, such as cytochrome P450, catalyze both oxidative and reductive reactions of many xenobiotics; many of the products of phase I enzymes are substrates for the phase II enzymes, which catalyze conjugation reactions. +Alterations in hepatocyte function have significant implications for overall human health and disease. Certain conditions, such as hepatitis, cirrhosis, and liver cancer, can profoundly affect hepatocyte structure and function, thereby disrupting the liver's ability to perform its vital roles within the body. As the primary site for drug metabolism, changes in hepatocyte function can also impact the effectiveness and toxicity of pharmaceuticals. The regenerative ability of hepatocytes makes them valuable cells for liver regenerative medicine and bioartificial liver support systems, and their study has provided significant insights into liver biology and disease.") AnnotationAssertion( "BTO:0000575") AnnotationAssertion( "CALOHA:TS-0454") AnnotationAssertion( "FMA:14515") +AnnotationAssertion( "https://cellxgene.cziscience.com/cellguide/CL_0000182") AnnotationAssertion(rdfs:comment "Hepatocytes are reportedly MHC Class I-positive and MHC Class II-positive.") AnnotationAssertion(rdfs:label "hepatocyte") SubClassOf( ) @@ -7843,23 +9466,26 @@ AnnotationAssertion( "muscle cell") SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cell of skeletal muscle) AnnotationAssertion(Annotation( "GOC:tfm") "A somatic cell located in skeletal muscle.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0004392") AnnotationAssertion( "CALOHA:TS-2158") AnnotationAssertion( "FMA:9727") AnnotationAssertion(rdfs:label "cell of skeletal muscle") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (smooth muscle cell) AnnotationAssertion(Annotation( "MESH:D032389") Annotation( "PMID:9315361") Annotation( "http://en.wikipedia.org/wiki/Smooth_muscle_cell") "A non-striated, elongated, spindle-shaped cell found lining the digestive tract, uterus, and blood vessels. They develop from specialized myoblasts (smooth muscle myoblast).") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0004576") AnnotationAssertion( "CALOHA:TS-2159") AnnotationAssertion( "FMA:14072") @@ -7874,10 +9500,26 @@ AnnotationAssertion( "MESH:D011984") AnnotationAssertion(rdfs:label "sensory receptor cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (mechanoreceptor cell) + +AnnotationAssertion(Annotation( "MESH:D008465") "A cell specialized to transduce mechanical stimuli and relay that information centrally in the nervous system.") +AnnotationAssertion(rdfs:label "mechanoreceptor cell") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (touch receptor cell) + +AnnotationAssertion(Annotation( "FBC:Autogenerated") "Any neuron that is capable of some detection of mechanical stimulus involved in sensory perception of touch.") +AnnotationAssertion(rdfs:label "touch receptor cell") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (chemoreceptor cell) AnnotationAssertion(Annotation( "MESH:D002628") "A cell specialized to detect chemical substances and relay that information centrally in the nervous system. Chemoreceptors may monitor external stimuli, as in taste and olfaction, or internal stimuli, such as the concentrations of oxygen and carbon dioxide in the blood.") @@ -7886,16 +9528,42 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (olfactory receptor cell) + +AnnotationAssertion(Annotation( "FBC:Autogenerated") "Any neuron that is capable of some detection of chemical stimulus involved in sensory perception of smell.") +AnnotationAssertion( "BTO:0004185") +AnnotationAssertion( "FMA:67860") +AnnotationAssertion( "MESH:D018034") +AnnotationAssertion( "Wikipedia:Olfactory_receptor_neuron") +AnnotationAssertion(rdfs:label "olfactory receptor cell") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (taste receptor cell) + +AnnotationAssertion(Annotation( "GOC:tfm") Annotation( "ISBN:0618947256") "A specialized cell involved in gustatory sensory perception.") +AnnotationAssertion( "FMA:67910") +AnnotationAssertion(rdfs:label "taste receptor cell") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (photoreceptor cell) -AnnotationAssertion(Annotation( "MESH:D010786") "A cell specialized to detect and transduce light.") +AnnotationAssertion(Annotation( "MESH:D010786") "A cell specialized in detecting light stimuli that are involved in visual perception.") AnnotationAssertion( "BTO:0001060") AnnotationAssertion( "CALOHA:TS-0868") AnnotationAssertion( "FMA:86740") AnnotationAssertion(rdfs:label "photoreceptor cell") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (electrically active cell) @@ -7924,6 +9592,22 @@ AnnotationAssertion(Annotation( "barrier cell") SubClassOf( ) +# Class: (insulating cell) + +AnnotationAssertion(rdfs:label "insulating cell") +SubClassOf( ) + +# Class: (myelinating Schwann cell) + +AnnotationAssertion(Annotation( "GOC:cvs") Annotation( "GOC:tfm") Annotation( "MESH:D012583") "A neuroglial cell of the peripheral nervous system which forms the insulating myelin sheaths of peripheral axons.") +AnnotationAssertion( "CALOHA:TS-0898") +AnnotationAssertion( "FMA:62121") +AnnotationAssertion(rdfs:label "myelinating Schwann cell") +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (motile cell) AnnotationAssertion(Annotation( "FB:ma") "A cell that moves by its own activities.") @@ -7937,6 +9621,7 @@ SubClassOf( ObjectSomeValuesFrom( "MESH:D004475") "A cell of the outer of the three germ layers of the embryo.") AnnotationAssertion( "FMA:72549") AnnotationAssertion(rdfs:label "ectodermal cell") +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -7945,6 +9630,7 @@ SubClassOf( ObjectSomeValuesFrom( "MESH:D008648") "A cell of the middle germ layer of the embryo.") AnnotationAssertion( "FMA:72554") AnnotationAssertion(rdfs:label "mesodermal cell") +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -7953,6 +9639,7 @@ SubClassOf( ObjectSomeValuesFrom( "MESH:D004707") "A cell of the inner of the three germ layers of the embryo.") AnnotationAssertion( "FMA:72555") AnnotationAssertion(rdfs:label "endodermal cell") +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -7961,22 +9648,23 @@ SubClassOf( ObjectSomeValuesFrom( "FB:ma") Annotation( "GOC:tfm") "A cell with a single nucleus.") AnnotationAssertion(rdfs:label "single nucleate cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (multinucleate cell) -AnnotationAssertion(Annotation( "FB:ma") "A cell with more than one nucleus.") -AnnotationAssertion( "AEO:0000203") -AnnotationAssertion( "WBbt:0008074") +AnnotationAssertion(Annotation( "FB:ma") Annotation( "Wikipedia:Multinucleate") "A cell with more than one nucleus.") AnnotationAssertion(rdfs:label "multinucleate cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (erythrocyte) AnnotationAssertion(Annotation( "GOC:tfm") Annotation( "MESH:D004912") "A red blood cell. In mammals, mature erythrocytes are biconcave disks containing hemoglobin whose function is to transport oxygen.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0000424") AnnotationAssertion( "CALOHA:TS-0290") AnnotationAssertion( "FMA:81100") @@ -8006,6 +9694,7 @@ SubClassOf( ObjectSomeValuesFrom( (macrophage) AnnotationAssertion(Annotation( "GOC:add") Annotation( "GOC:tfm") Annotation( "GO_REF:0000031") Annotation( "PMID:16213494") Annotation( "PMID:1919437") "A mononuclear phagocyte present in variety of tissues, typically differentiated from monocytes, capable of phagocytosing a variety of extracellular particulate material, including immune complexes, microorganisms, and dead cells.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0000801") AnnotationAssertion( "CALOHA:TS-0587") AnnotationAssertion( "FMA:63261") @@ -8020,28 +9709,69 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (keratinizing barrier epithelial cell) + +AnnotationAssertion(rdfs:label "keratinizing barrier epithelial cell") +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (stratified squamous epithelial cell) + +AnnotationAssertion(Annotation( "PMID:30422572") Annotation( "Wikipedia:Epithelium") Annotation( "Wikipedia:Stratified_squamous_epithelium") "A stratified epithelial cell that is part of squamous epithelium, characterized by multiple layers of cells. The basal layer is directly attached to the basement membrane and the apical layer consists of flattened squamous cells. This provides a protective barrier, commonly found in areas subject to abrasion, such as the skin, oral cavity, and esophagus.") +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "stratified squamous epithelial cell") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (stratified cuboidal epithelial cell) + +AnnotationAssertion(Annotation( "PMID:30422572") Annotation( "Wikipedia:Stratified_cuboidal_epithelium") "A stratified epithelial cell that is part of cuboidal epithelium, characterized by multiple layers of cuboidal cells forming the apical layer. This provides a protective lining for ducts in large glands, such as sweat glands.") +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "stratified cuboidal epithelial cell") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (Merkel cell) + +AnnotationAssertion(Annotation( "MESH:D018862") "A modified epidermal cell located in the stratum basale. They are found mostly in areas where sensory perception is acute. Merkel cells are closely associated with an expanded terminal bulb of an afferent myelinated nerve fiber.") +AnnotationAssertion( ) +AnnotationAssertion( "FMA:70548") +AnnotationAssertion(rdfs:label "Merkel cell") +SubClassOf( ) +SubClassOf(Annotation( "PMID:19782676") ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (eukaryotic cell) -AnnotationAssertion(Annotation( "FBC:Autogenerated") "Any cell that only exists in Eukaryota.") +AnnotationAssertion(Annotation( "FBC:Autogenerated") "Any cell that in taxon some Eukaryota.") AnnotationAssertion( "MESH:D005057") AnnotationAssertion(rdfs:label "eukaryotic cell") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (Eumycetozoan cell) -AnnotationAssertion(Annotation( "FBC:Autogenerated") "Any cell that only exists in Eumycetozoa.") +AnnotationAssertion(Annotation( "FBC:Autogenerated") "Any cell that in taxon some Eumycetozoa.") AnnotationAssertion(rdfs:label "Eumycetozoan cell") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (eye photoreceptor cell) AnnotationAssertion(Annotation( "FBC:Autogenerated") "Any photoreceptor cell that is part of some eye.") +AnnotationAssertion( ) AnnotationAssertion(rdfs:label "eye photoreceptor cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -8078,6 +9808,28 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (keratin accumulating cell) + +AnnotationAssertion(rdfs:label "keratin accumulating cell") +SubClassOf( ) + +# Class: (keratinocyte) + +AnnotationAssertion(Annotation( "GOC:dsd") Annotation( "MESH:D015603") Annotation( "PMID:15582983") Annotation( "PMID:15749908") Annotation( "PMID:19727116") Annotation( "http://en.wikipedia.org/wiki/Keratinocyte") "An epidermal cell which synthesizes keratin and undergoes a characteristic change as it moves upward from the basal layers of the epidermis to the cornified (horny) layer of the skin. Successive stages of differentiation of the keratinocytes forming the epidermal layers are basal cell, spinous or prickle cell, and the granular cell.") +AnnotationAssertion( ) +AnnotationAssertion( "BTO:0000667") +AnnotationAssertion( "CALOHA:TS-0500") +AnnotationAssertion( "FMA:62879") +AnnotationAssertion(rdfs:comment "Keratinocytes are reportedly CDw210a-negative, CDw210b-positive, CD281-positive, CD282-positive, CD285-positive, IL22Ra1-positive, Human keratinocytes are reportedly capable of secreting BD-2, BD-3, hCAP-18, CXCL1, CXCL5, CXCL8, elafin, MMP-3, NGAL, PDGF-A, S100A7, S100A8, and S100A9. Transcription factors: STAT3-positive.") +AnnotationAssertion(rdfs:label "keratinocyte") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (serous secreting cell) AnnotationAssertion(Annotation( "GOC:tfm") Annotation( "ISBN:0517223651") Annotation( "ISBN:0721662544") "Columnar glandular cell with irregular nucleus, copious granular endoplasmic reticulum and supranuclear granules. Secretes a watery fluid containing proteins known as serous fluid.") @@ -8101,9 +9853,11 @@ AnnotationAssertion(Annotation( "BTO:0000395") AnnotationAssertion( "CALOHA:TS-2168") AnnotationAssertion( "FMA:62499") +AnnotationAssertion( "MESH:D056809") AnnotationAssertion(rdfs:label "pulmonary alveolar epithelial cell") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stuff accumulating cell) @@ -8141,12 +9895,22 @@ AnnotationAssertion(Annotation( "mesenchyme condensation cell") SubClassOf( ) +# Class: (glioblast (sensu Vertebrata)) + +AnnotationAssertion(Annotation( "GOC:tfm") Annotation( "ISBN:0618947256") "An early neural cell developing from the early ependymal cell of the neural tube.") +AnnotationAssertion( "FMA:70564") +AnnotationAssertion(rdfs:label "glioblast (sensu Vertebrata)") +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) + # Class: (scleral cell) AnnotationAssertion(Annotation( "GOC:add") "A cell of the sclera of the eye.") AnnotationAssertion(rdfs:label "scleral cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -8157,6 +9921,7 @@ AnnotationAssertion(Annotation( "choroidal cell of the eye") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -8166,16 +9931,17 @@ SubClassOf( ObjectSomeValuesFrom( "FBC:Autogenerated") "Any cell that is part of some extraembryonic structure.") AnnotationAssertion(rdfs:label "extraembryonic cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (trophoblast cell) -AnnotationAssertion(Annotation( "GOC:tfm") Annotation( "MESH:D014327") "A cell lining the outside of the blastocyst. After binding to the endometrium, trophoblast cells develop into two distinct layers, an inner layer of mononuclear cytotrophoblast cells and an outer layer of continuous multinuclear cytoplasm, the syncytiotrophoblast cells, which form the early fetal-maternal interface.") +AnnotationAssertion(Annotation( "GOC:tfm") Annotation( "MESH:D014327") Annotation( "PMID:37630754") Annotation( "doi:10.1007/978-3-030-84725-8") "An extraembryonic cell that develops from a trophectodermal cell. This cell is found in the outer layer of the blastocyst and can invade other structures in the uterus once the blastocyst implants into the uterine wall. A trophoblast cell is involved in the implantation of the embryo into the uterine wall, placental formation, remodelling of maternal vasculature in the uterus, nutrient and gas exchange, hormone production, and immune modulation to support fetal development.") AnnotationAssertion( "FMA:83028") AnnotationAssertion(rdfs:label "trophoblast cell") +SubClassOf( ) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (epiblast cell) @@ -8201,6 +9967,11 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) +# Class: (stratified epithelial stem cell) + +AnnotationAssertion(rdfs:label "stratified epithelial stem cell") +SubClassOf( ) + # Class: (sphincter associated smooth muscle cell) AnnotationAssertion(Annotation( "GOC:cjm") "A smooth muscle cell that is part of a sphincter. A sphincter is a typically circular muscle that normally maintains constriction of a natural body passage or orifice and which relaxes as required by normal physiological functioning.") @@ -8212,6 +9983,7 @@ SubClassOf( ObjectSomeValuesFrom( (vascular associated smooth muscle cell) AnnotationAssertion(Annotation( "GOC:dsd") Annotation( "GOC:tfm") "A smooth muscle cell associated with the vasculature.") +AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vascular associated smooth muscle cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) @@ -8237,11 +10009,11 @@ AnnotationAssertion( "EHDAA2:0004546") AnnotationAssertion( "FMA:72395") AnnotationAssertion(rdfs:label "animal zygote") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (tracheoblast) @@ -8265,6 +10037,7 @@ SubClassOf( ObjectSomeValuesFrom( (CNS interneuron) AnnotationAssertion(Annotation( "doi:10.1016/B978-0-12-817424-1.00001-X") "An interneuron that has its cell body in a central nervous system.") +AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Interneurons are commonly described as being only found in the central nervous system. However, in CL we define 'interneuron' more broadly as any neuron that is neither a motor neuron nor a sensory neuron, regardless of its location, so we need this term to refer strictly to interneurons of the central nervous system.") AnnotationAssertion(rdfs:label "CNS interneuron") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) @@ -8306,6 +10079,7 @@ SubClassOf( (dendritic cell) AnnotationAssertion(Annotation( "GOC:add") Annotation( "ISBN:0781735149") "A cell of hematopoietic origin, typically resident in particular tissues, specialized in the uptake, processing, and transport of antigens to lymph nodes for the purpose of stimulating an immune response via T cell activation. These cells are lineage negative (CD3-negative, CD19-negative, CD34-negative, and CD56-negative).") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0002042") AnnotationAssertion( "CALOHA:TS-0194") AnnotationAssertion( "FMA:83036") @@ -8314,6 +10088,7 @@ AnnotationAssertion(rdfs:label "dend EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -8359,9 +10134,17 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (inhibitory interneuron) + +AnnotationAssertion(Annotation( "GOC:tfm") Annotation( "http://en.wikipedia.org/wiki/Interneuron") "An interneuron (also called relay neuron, association neuron or local circuit neuron) is a multipolar neuron which connects afferent neurons and efferent neurons in neural pathways. Like motor neurons, interneuron cell bodies are always located in the central nervous system (CNS).") +AnnotationAssertion( "FMA:84776") +AnnotationAssertion(rdfs:label "inhibitory interneuron") +SubClassOf( ) + # Class: (stromal cell) AnnotationAssertion(Annotation( "GOC:tfm") Annotation( "MESH:D017154") "A connective tissue cell of an organ found in the loose connective tissue. These are most often associated with the uterine mucosa and the ovary as well as the hematopoietic system and elsewhere.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0002064") AnnotationAssertion( "FMA:83624") AnnotationAssertion(rdfs:label "stromal cell") @@ -8372,7 +10155,13 @@ SubClassOf( ObjectSomeValuesFrom( (type D enteroendocrine cell) AnnotationAssertion(Annotation( "MESH:D019864") "A cell found throughout the gastrointestinal tract and in the pancreas. They secrete somatostatin in both an endocrine and paracrine manner. Somatostatin inhibits gastrin, cholecystokinin, insulin, glucagon, pancreatic enzymes, and gastric hydrochloric acid. A variety of substances which inhibit gastric acid secretion (vasoactive intestinal peptide, calcitonin gene-related peptide, cholecystokinin, beta-adrenergic agonists, and gastric inhibitory peptide) are thought to act by releasing somatostatin.") +AnnotationAssertion(Annotation( "DOI:10.1016/j.pharmthera.2015.05.007") Annotation( "DOI:10.1038/s41574-018-0020-6") Annotation( "DOI:10.1093/annonc/mdh216") Annotation( "https://www.sciencedirect.com/topics/neuroscience/somatostatin-cell") "This extended description was generated by ChatGPT and reviewed by the CellGuide team, who added references, and by the CL editors, who approved it for inclusion in CL. It may contain information that applies to only to some subtypes and species, and so should not be considered definitional. + +Type D enteroendocrine cells, also known as D or delta cells, are specialized hormone-releasing cells found in the pancreas and also scattered throughout the lining of the gastrointestinal tract in mammals, notably within the stomach and the upper part of the small intestine known as the duodenum. The primary role of D cells is to produce and secrete somatostatin, a potent paracrine inhibitor. +In the gastrointestinal tract, somatostatin slows down digestion. It reduces gastric acid secretion and slows down the rate of gastric emptying, thereby prolonging and controling the digestive p. Functionally, these effects are aimed at sustaining nutrient absorption to optimize energy extraction from consumed food. +In the pancreas, D cells maintain a vital role in endocrine regulation. D cells in the pancreatic islands secrete somatostatin to inhibit the release of both insulin and glucagon from type A cells and B cells, glucoregulatory hormones that control blood sugar levels. Hence, D cells contribute considerably to the homeostasis of the body's metabolic processes. It is also noteworthy that dysfunctional D cells or irregular somatostatin signaling has been associated with certain pathologies such as neuroendocrine tumors and gastric ulcers.") AnnotationAssertion( "FMA:62935") +AnnotationAssertion( "https://cellxgene.cziscience.com/cellguide/CL_0000502") AnnotationAssertion(rdfs:label "type D enteroendocrine cell") SubClassOf( ) SubClassOf( ) @@ -8398,12 +10187,13 @@ AnnotationAssertion(rdfs:label "type SubClassOf( ) SubClassOf( ) SubClassOf( ) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (gastrin secreting cell) AnnotationAssertion(Annotation( "GO:tfm") "A peptide hormone secreting cell that secretes gastrin.") +AnnotationAssertion( ) AnnotationAssertion(rdfs:label "gastrin secreting cell") SubClassOf( ) @@ -8443,29 +10233,31 @@ AnnotationAssertion(Annotation( "phagocyte (sensu Vertebrata)") SubClassOf( ) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (fungal cell) -AnnotationAssertion(Annotation( "FBC:Autogenerated") "Any cell that only exists in Fungi.") +AnnotationAssertion(Annotation( "FBC:Autogenerated") "Any cell that in taxon some Fungi.") AnnotationAssertion(rdfs:label "fungal cell") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (syncytiotrophoblast cell) AnnotationAssertion(Annotation( "GOC:tfm") Annotation( "ISBN:0323052908") "A cell from the outer syncytial layer of the trophoblast of an early mammalian embryo, directly associated with the maternal blood supply. It secretes hCG in order to maintain progesterone secretion and sustain a pregnancy.") +AnnotationAssertion( ) AnnotationAssertion( "FMA:83043") AnnotationAssertion(rdfs:label "syncytiotrophoblast cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (afferent neuron) AnnotationAssertion(Annotation( "GOC:tfm") Annotation( "MESH:D009475") "A neuron which conveys sensory information centrally from the periphery.") +AnnotationAssertion( ) AnnotationAssertion( "FMA:87653") AnnotationAssertion(rdfs:label "afferent neuron") SubClassOf( ) @@ -8479,6 +10271,7 @@ SubClassOf( (neuron) AnnotationAssertion(Annotation( "MESH:D009474") Annotation( "http://en.wikipedia.org/wiki/Neuron") "The basic cellular unit of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0000938") AnnotationAssertion( "CALOHA:TS-0683") AnnotationAssertion( "FMA:54527") @@ -8491,9 +10284,21 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (melanoblast) + +AnnotationAssertion(Annotation( "GOC:tfm") Annotation( "SANBI:mhl") "A cell that originates from the neural crest and differentiates into a pigment cell.") +AnnotationAssertion( "BTO:0003217") +AnnotationAssertion( "FMA:83377") +AnnotationAssertion(rdfs:comment "Derived from UBERON:0002342 neural crest.") +AnnotationAssertion(rdfs:label "melanoblast") +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (lymphocyte) AnnotationAssertion(Annotation( "GOC:add") Annotation( "ISBN:0683073696") Annotation( "ISBN:0781735149") "A lymphocyte is a leukocyte commonly found in the blood and lymph that has the characteristics of a large nucleus, a neutral staining cytoplasm, and prominent heterochromatin.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0000775") AnnotationAssertion( "CALOHA:TS-0583") AnnotationAssertion( "FMA:62863") @@ -8517,6 +10322,7 @@ AnnotationAssertion(rdfs:label "proe EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -8541,6 +10347,7 @@ AnnotationAssertion( "basophilic erythroblast") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -8552,6 +10359,7 @@ AnnotationAssertion( "polychromatophilic erythroblast") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -8571,6 +10379,7 @@ SubClassOf( ObjectSomeValuesFrom( (megakaryocyte progenitor cell) AnnotationAssertion(Annotation( "GOC:dsd") Annotation( "GOC:tfm") Annotation( "ISBN:0721601464") "The earliest cytologically identifiable precursor in the thrombocytic series. This cell is capable of endomitosis and lacks expression of hematopoieitic lineage markers (lin-negative).") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0001164") AnnotationAssertion( "CALOHA:TS-0610") AnnotationAssertion( "FMA:84235") @@ -8596,9 +10405,15 @@ SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (neuronal brush cell) + +AnnotationAssertion(rdfs:label "neuronal brush cell") +SubClassOf( ) + # Class: (megakaryocyte) AnnotationAssertion(Annotation( "ISBN:0721601464") Annotation( "MESH:D008533") Annotation( "PMID:31043076") Annotation( "http://en.wikipedia.org/wiki/Megakaryocyte") "A large hematopoietic cell (50 to 100 micron) with a lobated nucleus. Once mature, this cell undergoes multiple rounds of endomitosis and cytoplasmic restructuring to allow platelet formation and release.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0000843") AnnotationAssertion( "CALOHA:TS-0611") AnnotationAssertion( "FMA:83555") @@ -8612,6 +10427,7 @@ DisjointClasses( (granulocyte monocyte progenitor cell) AnnotationAssertion(Annotation( "GOC:amm") Annotation( "GOC:dsd") Annotation( "GOC:tfm") Annotation( "GO_REF:0000031") Annotation( "ISBN:0721601464") Annotation( "MESH:D055014") Annotation( "PMCID:PMC2213186") Annotation( "PMCID:PMC548021") Annotation( "PMID:16551251") Annotation( "PMID:16647566") Annotation( "http://en.wikipedia.org/wiki/CFU-GM") Annotation( "http://www.copewithcytokines.de") "A hematopoietic progenitor cell that is committed to the granulocyte and monocyte lineages. These cells are CD123-positive, and do not express Gata1 or Gata2 but do express C/EBPa, and Pu.1.") +AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Originally described in the dendritic cell ontology (DC_CL:0000042)(PMID:19243617). GMPs are reportedly CD16-positive, CD32-positive, CD34-positive, CD38-positive, CD45RA-positive, CD110-negative, CD117-positive, CD123-positive, and SCA1-negative.") AnnotationAssertion(rdfs:label "granulocyte monocyte progenitor cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) @@ -8619,6 +10435,7 @@ SubClassOf( ) SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -8636,6 +10453,7 @@ AnnotationAssertion( "reticulocyte") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -8654,6 +10472,7 @@ SubClassOf( ObjectSomeValuesFrom( (promonocyte) AnnotationAssertion(Annotation( "GOC:tfm") Annotation( "ISBN:0721601464") "A precursor in the monocytic series, being a cell intermediate in development between the monoblast and monocyte. This cell is CD11b-positive and has fine azurophil granules.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0004657") AnnotationAssertion( "FMA:83551") AnnotationAssertion(rdfs:comment "Morphology: Mononuclear cell, diameter 14-18 _M, fine azurophilic granules; markers: CD11b (shared with many other myeloid cells); location: Adult: bone marrow; Fetal: Liver, Yolk Sac; role or process: hematopoiesis, monocyte development; lineage: hematopoietic, myeloid.") @@ -8661,6 +10480,7 @@ AnnotationAssertion(rdfs:label "prom EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -8682,6 +10502,7 @@ AnnotationAssertion(rdfs:label "angi EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -8699,6 +10520,7 @@ SubClassOf( ObjectSomeValuesFrom( (retinal cone cell) AnnotationAssertion(Annotation( "MESH:D017949") "One of the two photoreceptor cell types in the vertebrate retina. In cones the photopigment is in invaginations of the cell membrane of the outer segment. Cones are less sensitive to light than rods, but they provide vision with higher spatial and temporal acuity, and the combination of signals from cones with different pigments allows color vision.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0001036") AnnotationAssertion( "CALOHA:TS-0866") AnnotationAssertion( "FMA:67748") @@ -8709,6 +10531,7 @@ SubClassOf( ObjectSomeValuesFrom( (corneal epithelial cell) AnnotationAssertion(Annotation( "GOC:tfm") "An epithelial cell of the cornea.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0004298") AnnotationAssertion( "CALOHA:TS-0173") AnnotationAssertion( "FMA:70551") @@ -8721,6 +10544,7 @@ SubClassOf( ObjectSomeValuesFrom( (monocyte) AnnotationAssertion(Annotation( "GO_REF:0000031") Annotation( "MESH:D009000") "Myeloid mononuclear recirculating leukocyte that can act as a precursor of tissue macrophages, osteoclasts and some populations of tissue dendritic cells.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0000876") AnnotationAssertion( "CALOHA:TS-0638") AnnotationAssertion( "FMA:62864") @@ -8738,16 +10562,24 @@ SubClassOf( ObjectSomeValuesFrom( (alveolar macrophage) AnnotationAssertion(Annotation( "GOC:ana") Annotation( "GOC:dsd") Annotation( "GOC:tfm") Annotation( "GO_REF:0000031") Annotation( "MESH:D016676") "A tissue-resident macrophage found in the alveoli of the lungs. Ingests small inhaled particles resulting in degradation and presentation of the antigen to immunocompetent cells. Markers include F4/80-positive, CD11b-/low, CD11c-positive, CD68-positive, sialoadhesin-positive, dectin-1-positive, MR-positive, CX3CR1-negative.") +AnnotationAssertion( ) +AnnotationAssertion(Annotation( "DOI:10.1007/s00424-017-1965-3") Annotation( "DOI:10.1016/j.cellimm.2018.01.005") Annotation( "DOI:10.1038/nri3600") Annotation( "DOI:10.14348/molcells.2021.0058") "This extended description was generated by ChatGPT and reviewed by the CellGuide team, who added references, and by the CL editors, who approved it for inclusion in CL. It may contain information that applies to only to some subtypes and species, and so should not be considered definitional. + +Alveolar macrophages are unique tissue-resident macrophages found in the lungs, specifically in the air sacs or alveoli where gas exchange occurs. They are characterized by specific surface markers including: F4/80-positive, CD11b-/low, CD11c-positive, CD68-positive, sialoadhesin-positive, dectin-1-positive, MR-positive, CX3CR1-negative. These specialized immune cells form a crucial part of the body's defense mechanism, playing important roles in pulmonary health and homeostasis. They are the first line of defense in the pulmonary immune response, acting as scavengers that patrol the alveoli and engulf foreign particles like bacteria, dust, and other debris that enter the lungs through inhalation. +The primary function of these alveolar macrophages is phagocytosis, whereby they consume and digest foreign substances, dead cells, and other particulates. In the lung, alveolar macrophages are also responsible for clearing surfactant. Additionally, alveolar macrophages also play an integral role in initiating the immune response, as they secrete several pro-inflammatory cytokines and chemokines that recruit other immune cells to the site of infection or inflammation. +Beyond their role in host defense, alveolar macrophages contribute to tissue remodeling and wound repair in the lungs, aiding in maintaining lung integrity. They also regulate local inflammation and control the immune response to prevent excessive inflammation that may be harmful. However, an imbalance in the function of alveolar macrophages can contribute to various lung diseases. Abnormal alveolar macrophage activation has been implicated in chronic inflammatory diseases such as emphysema, asthma, and fibrosis.") AnnotationAssertion( "BTO:0000802") AnnotationAssertion( "CALOHA:TS-0030") AnnotationAssertion( "FMA:83023") +AnnotationAssertion( "https://cellxgene.cziscience.com/cellguide/CL_0000583") AnnotationAssertion(rdfs:comment "Markers: Mouse: F4/80mid, CD11b-/low, CD11c+, CD68+, sialoadhesin+, dectin-1+, MR+, CX3CR1-.") AnnotationAssertion(rdfs:label "alveolar macrophage") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -8775,9 +10607,22 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (pyramidal neuron) + +AnnotationAssertion(Annotation( "GOC:tfm") Annotation( "MESH:D017966") "Pyramidal neurons have a pyramid-shaped soma with a single axon, a large apical dendrite and multiple basal dendrites. The apex and an apical dendrite typically point toward the pial surface and other dendrites and an axon emerging from the base. The axons may have local collaterals but also project outside their region. Pyramidal neurons are found in the cerebral cortex, the hippocampus, and the amygdala.") +AnnotationAssertion( "BTO:0003102") +AnnotationAssertion( "FMA:67310") +AnnotationAssertion( "FMA:86775") +AnnotationAssertion( "NIFSTD:sao862606388") +AnnotationAssertion(rdfs:label "pyramidal neuron") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (retinal rod cell) AnnotationAssertion(Annotation( "MESH:D017948") "One of the two photoreceptor cell types of the vertebrate retina. In rods the photopigment is in stacks of membranous disks separate from the outer cell membrane. Rods are more sensitive to light than cones, but rod mediated vision has less spatial and temporal resolution than cone vision.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0001024") AnnotationAssertion( "CALOHA:TS-0870") AnnotationAssertion( "FMA:67747") @@ -8785,11 +10630,30 @@ AnnotationAssertion(rdfs:label "reti SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (GABAergic neuron) + +AnnotationAssertion(Annotation( "GOC:tfm") "A neuron that uses GABA as a vesicular neurotransmitter") +AnnotationAssertion( "FMA:84788") +AnnotationAssertion( "MESH:D059330") +AnnotationAssertion( "WBbt:0005190") +AnnotationAssertion(rdfs:label "GABAergic neuron") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (acinar cell) AnnotationAssertion(Annotation( "GOC:tfm") Annotation( "http://www.copewithcytokines.de") "A secretory cell that is grouped together with other cells of the same type to form grape shaped clusters known as acini (singular acinus).") +AnnotationAssertion(Annotation( "DOI:10.1007/BF00710764") Annotation( "DOI:10.1038/nrgastro.2013.36") Annotation( "DOI:10.1097/MOG.0b013e32832ebfac") Annotation( "DOI:10.1111/prd.12116") Annotation( "DOI:10.1152/physrev.00011.2011") "This extended description was generated by ChatGPT and reviewed by the CellGuide team, who added references, and by the CL editors, who approved it for inclusion in CL. It may contain information that applies to only to some subtypes and species, and so should not be considered definitional. + +Acinar cells are specialized exocrine gland cells that secrete specific enzymes and fluids to aid in digestion. Found primarily in the pancreas and salivary glands, the term acinar is derived from the Latin word 'acinus' which means 'grape'; this is because acinar cells are arranged in a grape-like cluster around small ducts, formulating an acinus structure. +In the salivary glands, acinar cells secrete digestive enzymes as well as other substances such as mucus and water. These secretions service the initial stages of the digestive process, preparing the consumed food for onward digestion in the stomach and intestines by lubricating and partially breaking it down. +In the pancreas, acinar cells are responsible for synthesizing and secreting a significant amount of digestive enzymes, such as trypsin, chymotrypsin, and amylase. These enzymes are stored in zymogen granules inside the acinar cells until they are dispatched into the small intestine. Once within the small intestine, they break down proteins, carbohydrates, and fats into substances that can be absorbed. This is vital to the effective and efficient digestion and absorption of nutrients from the food we consume. +Acinar cells have high protein synthesis rates and are susceptible to accumulation of misfolded proteins; the subsequential induction of ER stress is thought to be involved in the development of pancreatitis, a serious inflammatory disease of the exocrine pancreas.") AnnotationAssertion( "FMA:83625") AnnotationAssertion( "MESH:D061354") +AnnotationAssertion( "https://cellxgene.cziscience.com/cellguide/CL_0000622") AnnotationAssertion(rdfs:label "acinar cell") SubClassOf( ) SubClassOf( ) @@ -8802,9 +10666,26 @@ AnnotationAssertion( "supporting cell") SubClassOf( ) +# Class: (basal cell) + +AnnotationAssertion(Annotation( "GOC:tfm") Annotation( "ISBN:0517223651") "Undifferentiated; mitotic stem cell for other epithelial cell types; rounded or elliptical with little cytoplasm and few organelles; contain cytokeratin intermediate filament.") +AnnotationAssertion( ) +AnnotationAssertion( "BTO:0000939") +AnnotationAssertion( "FMA:62516") +AnnotationAssertion(rdfs:label "basal cell") +SubClassOf( ) + # Class: (fenestrated endothelial cell) AnnotationAssertion(Annotation( "DOI:10.1007/978-3-211-99390-3_133") "An endothelial cell that has small pores, or fenestrations, which allow for the efficient exchange of substances between the blood and surrounding tissues.") +AnnotationAssertion(Annotation( "DOI:10.1002/ar.1092200109") Annotation( "DOI:10.1016/0306-4522(86)90162-4") Annotation( "DOI:10.1016/j.devcel.2012.11.003") Annotation( "DOI:10.1038/s41467-022-31571-2") Annotation( "DOI:10.1152/ajprenal.90601.2008") "This extended description was generated by ChatGPT and reviewed by the CellGuide team, who added references, and by the CL editors, who approved it for inclusion in CL. It may contain information that applies to only to some subtypes and species, and so should not be considered definitional. + +Fenestrated cells are specialized epithelial cells that are characterized by a distinctive structural feature, fenestrations or tiny pores, which allow an exchange of substances such as fluids, nutrients, and waste between blood vessels and the surrounding tissue environments. These cells are present in various types of epithelial tissues in the human body, including the intestinal tract, endocrine glands, and certain parts of the renal system. +There are multiple types of endothelial cell fenestrations. The most common type is found in systemic capillaries of the endocrine tissue (e.g., pancreatic islets), gastrointestinal mucosa, and renal peritubular capillaries. Here, the fenestrated cells have fenestrations in their peripheral cytoplasm with a unique thin and permeable diaphragm that provides a high degree of selectivity, blocking the passage of larger molecules while allowing the free movement of smaller ones. In contrast, other types of fenestrations, such as the discontinuous epithelium of the liver sinusoidal endothelial cells, do not have diaphragms. +Characteristically, fenestrated cells play a vital role in the filtering process of body systems. They are a key part of the glomeruli in the kidneys where blood is filtered under high pressure. The fenestrations present in the endothelial cells lining the capillaries of the glomerulus allow the free passage of water and small solute molecules towards the Bowman's capsule, leaving behind larger proteins and cells in the blood, thereby aiding in the filtration and waste removal process. +In the endocrine system, fenestrated cells in glandular capillaries allow the prompt release of hormones into the bloodstream. These cells have tightly clustered fenestrations which increase the surface area available for passive diffusion, improving the efficiency of hormone secretion. In villi of the small intestine, these cells increase absorption efficiency, permitting the exchange of water, electrolytes, and nutrients. +Overall, fenestrated cells contribute immensely to important physiological processes of filtration, absorption, and secretion, primarily connecting our body's circulation system with the surrounding tissues and organs.") +AnnotationAssertion( "https://cellxgene.cziscience.com/cellguide/CL_0000666") AnnotationAssertion(rdfs:label "fenestrated endothelial cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) @@ -8819,6 +10700,7 @@ SubClassOf( (pericyte) AnnotationAssertion(Annotation( "GOC:dsd") Annotation( "GOC:tfm") Annotation( "ISBN:0721662544") Annotation( "MESH:D020286") Annotation( "PMID:16807374") Annotation( "PMID:17986482") Annotation( "PMID:20024907") "An elongated, contractile cell found wrapped about precapillary arterioles outside the basement membrane. Pericytes are present in capillaries where proper adventitia and muscle layer are missing (thus distingushing this cell type from adventitial cells). They are relatively undifferentiated and may become fibroblasts, macrophages, or smooth muscle cells.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0002441") AnnotationAssertion( "FMA:63174") AnnotationAssertion(rdfs:comment "Pericytes are CD10-positive, CD13-positive, CD31-negative, CD45-negative, CD106-positive, CD117-negative, CD140-positive, CD144-negative, CD146-positive, CD271-positive, CD325-positive, NG2-positive, RGS5-positive, SMA-positive, and desmin-positive. A subpopulation is CD248-positive. They are also capable of producing angiopoietin 1, CXCL12, TGF-beta, and VEGF-A.") @@ -8845,6 +10727,17 @@ AnnotationAssertion(rdfs:label "fema SubClassOf( ) SubClassOf( ) +# Class: (glutamatergic neuron) + +AnnotationAssertion( "A neuron that is capable of some neurotansmission by glutamate secretion.") +AnnotationAssertion( ) +AnnotationAssertion( "WBbt:0006829") +AnnotationAssertion(rdfs:label "glutamatergic neuron") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (muscle precursor cell) AnnotationAssertion(Annotation( "GOC:add") "A non-terminally differentiated cell that is capable of developing into a muscle cell.") @@ -8852,14 +10745,21 @@ AnnotationAssertion(rdfs:label "musc EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (PP cell) AnnotationAssertion(Annotation( "GOC:tfm") Annotation( "JB:jb") Annotation( "PMID:15153415") "A cell that stores and secretes pancreatic polypeptide hormone.") +AnnotationAssertion(Annotation( "DOI:10.1016/j.febslet.2014.07.005") Annotation( "DOI:10.1016/j.mce.2015.06.028") Annotation( "DOI:10.1038/s41580-020-00317-7") Annotation( "DOI:10.1210/jc.2003-030630") Annotation( "DOI:10.1369/00221554155835") "This extended description was generated by ChatGPT and reviewed by the CellGuide team, who added references, and by the CL editors, who approved it for inclusion in CL. It may contain information that applies to only to some subtypes and species, and so should not be considered definitional. + +PP cells, also known as pancreatic polypeptide cells (and previously called F cells or gamma cells), are enteroendocrine cells predominantly found in the islets of Langerhans in the head of the pancreas. They are one of the four main endocrine cell types present in the pancreatic islets, along with type A, B and D cells. PP cells are notable for their production of pancreatic polypeptide, an anorexigenic hormone that modulates food intake and energy homeostasis. +By secreting pancreatic polypeptide, PP cells play a significant role in the management of both digestive and appetite regulation. Upon ingestion of food, there is a significant increase in the secretion of pancreatic polypeptide, which then reduces biliary secretion and helps slow down the movement of food through the digestive tract. This allows more time for digestion to take place and nutrients to be absorbed, promoting the efficient use of dietary intake. The pancreatic polypeptide further reduces appetite by interacting with the hypothalamus, the area of the brain responsible for control of hunger. +Given their important role in digestion, malfunction or damage to PP cells can lead to a disturbance in the digestive process and contribute to some disease conditions. For example, an overproduction of pancreatic polypeptide can result in conditions such as pancreatic tumors and diabetes. Conversely, an under secretion might contribute to obesity due to impaired dietary control. Furthermore, PP cells may also play a role in the body's energy balance, suggesting their implication in conditions related to energy metabolism.") AnnotationAssertion( "FMA:62938") AnnotationAssertion( "FMA:83409") +AnnotationAssertion( "https://cellxgene.cziscience.com/cellguide/CL_0000696") AnnotationAssertion(rdfs:label "PP cell") SubClassOf( ) SubClassOf( ) @@ -8902,6 +10802,7 @@ DisjointClasses( (leukocyte) AnnotationAssertion(Annotation( "GOC:add") Annotation( "GOC:tfm") Annotation( "ISBN:978-0-323-05290-0") "An achromatic cell of the myeloid or lymphoid lineages capable of ameboid movement, found in blood or other tissue.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0000751") AnnotationAssertion( "CALOHA:TS-0549") AnnotationAssertion( "FMA:62852") @@ -8915,13 +10816,14 @@ SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (retinal ganglion cell) AnnotationAssertion(Annotation( "GOC:dph") "The set of neurons that receives neural inputs via bipolar, horizontal and amacrine cells. The axons of these cells make up the optic nerve.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0001800") AnnotationAssertion( "FMA:67765") AnnotationAssertion( "MESH:D012165") @@ -8932,6 +10834,7 @@ SubClassOf( ObjectSomeValuesFrom( (cardiac muscle cell) AnnotationAssertion(Annotation( "GOC:mtg_cardiacconduct_nov11") Annotation( "GOC:tfm") Annotation( "ISBN:0323052908") Annotation( "PMID:22426062") Annotation( "PMID:4711263") "Cardiac muscle cells are striated muscle cells that are responsible for heart contraction. In mammals, the contractile fiber resembles those of skeletal muscle but are only one third as large in diameter, are richer in sarcoplasm, and contain centrally located instead of peripheral nuclei.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0001539") AnnotationAssertion( "CALOHA:TS-0115") AnnotationAssertion( "FMA:14067") @@ -8954,12 +10857,14 @@ AnnotationAssertion( "myeloid cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (erythroid lineage cell) AnnotationAssertion(Annotation( "GOC:add") Annotation( "GOC:tfm") "A immature or mature cell in the lineage leading to and including erythrocytes.") +AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-0290") AnnotationAssertion( "FMA:62845") AnnotationAssertion( "FMA:83516") @@ -9002,6 +10907,20 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) +# Class: (neutrophil) + +AnnotationAssertion(Annotation( "GOC:add") Annotation( "GOC:amm") Annotation( "GOC:tfm") Annotation( "ISBN:0721601464") "Any of the immature or mature forms of a granular leukocyte that in its mature form has a nucleus with three to five lobes connected by slender threads of chromatin, and cytoplasm containing fine inconspicuous granules and stainable by neutral dyes.") +AnnotationAssertion( ) +AnnotationAssertion( "BTO:0000130") +AnnotationAssertion( "CALOHA:TS-0688") +AnnotationAssertion( "FMA:62860") +AnnotationAssertion( "MESH:D009504") +AnnotationAssertion(rdfs:label "neutrophil") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (mononuclear osteoclast) AnnotationAssertion(Annotation( "GOC:add") Annotation( "GOC:tfm") Annotation( "PMID:12713016") Annotation( "PMID:15055519") Annotation( "PMID:17380158") Annotation( "PMID:9415452") "A specialized mononuclear osteoclast associated with the absorption and removal of bone, precursor of multinuclear osteoclasts.") @@ -9013,12 +10932,13 @@ SubClassOf( (multinuclear osteoclast) -AnnotationAssertion(Annotation( "GOC:add") Annotation( "PMID:12713016") Annotation( "PMID:9415452") "A specialized multinuclear osteoclast associated with the absorption and removal of bone.") +AnnotationAssertion(Annotation( "GOC:add") Annotation( "PMID:12713016") Annotation( "PMID:29379067") Annotation( "PMID:38903088") Annotation( "PMID:9415452") "A specialized multinuclear osteoclast, forming a syncytium through the fusion of mononuclear precursor cells, associated with the absorption and removal of bone.") AnnotationAssertion(rdfs:comment "Morphology: multinucleated, highly vesicular.") AnnotationAssertion(rdfs:label "multinuclear osteoclast") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (myeloid dendritic cell) @@ -9050,6 +10970,16 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (neutrophil progenitor cell) + +AnnotationAssertion(Annotation( "GOC:add") Annotation( "GOC:tfm") Annotation( "ISBN:0721601464") "A progenitor cell of the neutrophil lineage.") +AnnotationAssertion(rdfs:label "neutrophil progenitor cell") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (myeloblast) AnnotationAssertion(Annotation( "GOC:add") Annotation( "ISBN:0721601464") Annotation( "http://en.wikipedia.org/wiki/Myeloblast") Annotation( "http://www.cap.org") "The most primitive precursor in the granulocytic series, having fine, evenly distributed chromatin, several nucleoli, a high nuclear-to-cytoplasmic ration (5:1-7:1), and a nongranular basophilic cytoplasm. They reside in the bone marrow.") @@ -9068,13 +10998,16 @@ SubClassOf( ObjectSomeValuesFrom( (hematopoietic multipotent progenitor cell) AnnotationAssertion(Annotation( "GOC:add") Annotation( "GOC:tfm") Annotation( "PMID:19022770") "A hematopoietic multipotent progenitor cell is multipotent, but not capable of long-term self-renewal. These cells are characterized as lacking lineage cell surface markers and being CD34-positive in both mice and humans.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0000725") AnnotationAssertion( "CALOHA:TS-0448") AnnotationAssertion(rdfs:comment "Markers differ between mouse and human.") AnnotationAssertion(rdfs:label "hematopoietic multipotent progenitor cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -9110,6 +11043,7 @@ DisjointClasses( (myeloid lineage restricted progenitor cell) AnnotationAssertion(Annotation( "GOC:add") Annotation( "GOC:tfm") Annotation( "PMID:19022770") "A progenitor cell restricted to the myeloid lineage.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0004730") AnnotationAssertion( "CALOHA:TS-2099") AnnotationAssertion( "FMA:70339") @@ -9131,13 +11065,40 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) +# Class: (ciliated olfactory receptor neuron) + +AnnotationAssertion(Annotation( "PMID:16841163") "An olfactory receptor cell in which the apical ending of the dendrite is a pronounced ciliated olfactory knob.") +AnnotationAssertion(rdfs:label "ciliated olfactory receptor neuron") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) + +# Class: (serotonergic neuron) + +AnnotationAssertion(Annotation( "SANBI:mhl") "A neuron that releases serotonin as a neurotransmitter.") +AnnotationAssertion( "MESH:D059326") +AnnotationAssertion( "WBbt:0006837") +AnnotationAssertion(rdfs:label "serotonergic neuron") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (classical monocyte) AnnotationAssertion(Annotation( "GOC:add") Annotation( "GO_REF:0000031") Annotation( "PMID:16322748") Annotation( "PMID:18303997") Annotation( "PMID:20628149") Annotation( "PMID:20870168") "A monocyte that responds rapidly to microbial stimuli by secreting cytokines and antimicrobial factors and which is characterized by high expression of CCR2 in both rodents and humans, negative for the lineage markers CD3, CD19, and CD20, and of larger size than non-classical monocytes.") +AnnotationAssertion( ) +AnnotationAssertion(Annotation( "DOI:10.1038/nri.2017.28") Annotation( "DOI:10.1111/sji.12883") Annotation( "DOI:10.1182/blood-2009-07-235028") Annotation( "DOI:10.3389/fimmu.2015.00423/full") Annotation( "DOI:10.3389/fimmu.2019.02035") "This extended description was generated by ChatGPT and reviewed by the CellGuide team, who added references, and by the CL editors, who approved it for inclusion in CL. It may contain information that applies to only to some subtypes and species, and so should not be considered definitional. + +Classical monocytes are a subtype of monocytes that are characterized by high CD14 but no CD16 expression. Emerging from the bone marrow and entering the bloodstream, these cells play central roles in immune responses and regulation of inflammation. CD14-positive CD16-negative monocytes form the majority of circulating monocytes in the body, typically contributing to around 80-90% of the total monocyte pool. +The primary function of the classical monocytes is to serve in the frontline of host defense against infections. They are primed to migrate to sites of infection, and they express pattern recognition receptors that help them identify and phagocytose pathogens, leading to their destruction. Classical monocytes also contribute to inflammation by producing several pro-inflammatory cytokines including interleukins and tumor necrosis factors. +In response to specific signals from tissues under pathological conditions, such as infection or injury, classical monocytes can leave the bloodstream and migrate towards the affected sites. Following their arrival, these cells differentiate into diverse cell types including macrophages and dendritic cells to combat specific pathogens or injury. Dysregulated monocyte activity can lead to the development of many human diseases including inflammation, infection, tissue injury, and various autoimmune diseases.") +AnnotationAssertion( "https://cellxgene.cziscience.com/cellguide/CL_0000860") AnnotationAssertion(rdfs:comment "Markers: CCR2+CXCCR1 (human, mouse, rat).") AnnotationAssertion(rdfs:label "classical monocyte") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -9154,6 +11115,7 @@ AnnotationAssertion(rdfs:comment "Ma AnnotationAssertion(rdfs:label "elicited macrophage") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -9191,6 +11153,7 @@ SubClassOf( ObjectSomeValuesFrom( (early lymphoid progenitor) AnnotationAssertion(Annotation( "GOC:add") Annotation( "GOC:dsd") Annotation( "GOC:pam") Annotation( "GOC:tfm") Annotation( "GO_REF:0000031") Annotation( "PMID:19022770") "A lymphoid progenitor cell that is found in bone marrow, gives rise to B cells, T cells, natural killer cells and dendritic cells, and has the phenotype Lin-negative, Kit-positive, Sca-1-positive, FLT3-positive, CD34-positive, CD150 negative, and GlyA-negative.") +AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "Markers are associated with mouse cells. ELP transcription factors include E2A-positive, Ikaros-positive, EBF-negative, Pax5-negative, PU.1-negative.") AnnotationAssertion(rdfs:label "early lymphoid progenitor") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) @@ -9216,6 +11179,7 @@ SubClassOf( (conventional dendritic cell) AnnotationAssertion(Annotation( "GOC:amm") Annotation( "GO_REF:0000031") Annotation( "PMID:17850486") "Conventional dendritic cell is a dendritic cell that is CD11c-high.") +AnnotationAssertion( ) AnnotationAssertion( "FMA:84191") AnnotationAssertion(rdfs:comment "Originally described in the dendritic cell ontology (DC_CL:0000003)(PMID:19243617) These cells are also CD20-negative, MHCII-positive.") AnnotationAssertion(rdfs:label "conventional dendritic cell") @@ -9237,6 +11201,7 @@ AnnotationAssertion(rdfs:comment "Ce AnnotationAssertion(rdfs:label "Kit and Sca1-positive hematopoietic stem cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -9269,6 +11234,7 @@ AnnotationAssertion(rdfs:label "CD34 EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -9285,6 +11251,7 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -9313,6 +11280,7 @@ AnnotationAssertion(rdfs:comment "Ce AnnotationAssertion(rdfs:label "CD34-positive, CD38-negative hematopoietic stem cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -9330,6 +11298,7 @@ AnnotationAssertion(rdfs:label "Kit- EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -9363,6 +11332,7 @@ AnnotationAssertion(rdfs:label "CD7- EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -9375,6 +11345,7 @@ AnnotationAssertion(rdfs:comment "Th AnnotationAssertion(rdfs:label "CD7-positive lymphoid progenitor cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -9388,6 +11359,7 @@ AnnotationAssertion(rdfs:label "comm EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -9412,21 +11384,45 @@ AnnotationAssertion(rdfs:label "CD11 EquivalentClasses( ObjectUnionOf( )) SubClassOf( ) +# Class: (cerebellar granule cell) + +AnnotationAssertion(Annotation( "GOC:mah") Annotation( "doi:10.12688/f1000research.15021.1") Annotation( "doi:10.3389/fncir.2020.611841") "An excitatory granule cell with a soma located in the granular layer of cerebellar cortex. A mature cerebellar granule cell has short dendrites with a characteristic claw-like appearance and a long axon that ascends to the molecular layer where it bifurcates (except in non-teleost fish, where it does not bifurcate) and extends mediolaterally to form parallel fibers.") +AnnotationAssertion( "BTO:0004278") +AnnotationAssertion(Annotation( "doi:10.3389/fncir.2020.611841") rdfs:comment "It has been noted in at least some mammalian species that granule cells are the most numerous cell type in the cerebellum and in the brain, with at least 99% of all cerebellar neurons being granule cells.") +AnnotationAssertion(rdfs:label "cerebellar granule cell") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (cortical granule cell) + +AnnotationAssertion(Annotation( "GOC:mah") "Granule cell that is part of the cerebral cortex.") +AnnotationAssertion(rdfs:label "cortical granule cell") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) + # Class: (bone cell) AnnotationAssertion(Annotation( "GOC:add") Annotation( "GO_REF:0000034") "A connective tissue cell found in bone.") +AnnotationAssertion( ) AnnotationAssertion(rdfs:label "bone cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (CD14-positive monocyte) AnnotationAssertion(Annotation( "GOC:add") Annotation( "PMID:22343568") "A monocyte that expresses CD14 and is negative for the lineage markers CD3, CD19, and CD20.") +AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "This cell type is compatible with the HIPC Lyoplate markers for 'monocyte'. Note that while CD14 is considered a reliable marker for human monocytes, it is only expressed on approximately 85% of mouse monocytes.") AnnotationAssertion(rdfs:label "CD14-positive monocyte") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -9440,6 +11436,7 @@ AnnotationAssertion(rdfs:label "comm EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -9473,6 +11470,7 @@ AnnotationAssertion( "erythroid progenitor cell, mammalian") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -9562,6 +11560,7 @@ AnnotationAssertion(rdfs:comment "Ma AnnotationAssertion(rdfs:label "CD34-positive, CD38-positive megakaryocyte erythroid progenitor cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -9574,6 +11573,7 @@ AnnotationAssertion(rdfs:comment "Ma AnnotationAssertion(rdfs:label "Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -9601,6 +11601,7 @@ AnnotationAssertion(rdfs:label "pre- EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -9626,6 +11627,7 @@ AnnotationAssertion(rdfs:comment "Ma AnnotationAssertion(rdfs:label "Kit-positive macrophage dendritic cell progenitor") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -9700,6 +11702,7 @@ AnnotationAssertion(rdfs:comment "Ce AnnotationAssertion(rdfs:label "Kit-negative, Ly-76 high orthochromatophilic erythroblasts") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -9714,6 +11717,7 @@ AnnotationAssertion(rdfs:comment "Ma AnnotationAssertion(rdfs:label "CD71-negative, GlyA-positive orthochromatic erythroblast") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -9724,6 +11728,7 @@ AnnotationAssertion(Annotation( "hematopoietic lineage restricted progenitor cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -9736,6 +11741,7 @@ AnnotationAssertion(rdfs:comment "Th AnnotationAssertion(rdfs:label "hematopoietic oligopotent progenitor cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -9803,6 +11809,7 @@ SubClassOf( ObjectSomeValuesFrom( (pulmonary alveolar type 1 cell) AnnotationAssertion(Annotation( "GOC:tfm") Annotation( "PMID:20054144") Annotation( "PMID:29463737") Annotation( "http://www.copewithcytokines.de") "A squamous pulmonary alveolar epithelial cell that is flattened and branched. A pulmonary alveolar type 1 cell covers more than 98% of the alveolar surface. This large cell has thin (50-100 nm) cytoplasmic extensions to form the air-blood barrier essential for normal gas exchange.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0000780") AnnotationAssertion( "FMA:62500") AnnotationAssertion(rdfs:label "pulmonary alveolar type 1 cell") @@ -9813,6 +11820,7 @@ SubClassOf( ObjectSomeValuesFrom( (pulmonary alveolar type 2 cell) AnnotationAssertion(Annotation( "GOC:tfm") Annotation( "ISBN:0412046911") Annotation( "PMID:36138472") Annotation( "PMID:8540632") Annotation( "http://www.copewithcytokines.de") "A pulmonary alveolar epithelial cell that modulates the fluid surrounding the alveolar epithelium by secreting and recycling surfactants. This cell type also contributes to tissue repair and can differentiate after injury into a pulmonary alveolar type 1 cell. This cuboidal cell is thicker than squamous alveolar cells, have a rounded apical surface that projects above the level of surrounding epithelium. The free surface is covered by short microvilli.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0000538") AnnotationAssertion( "FMA:62501") AnnotationAssertion(rdfs:label "pulmonary alveolar type 2 cell") @@ -9825,9 +11833,17 @@ SubClassOf( ObjectSomeValuesFrom( (pancreatic acinar cell) AnnotationAssertion(Annotation( "GOC:tfm") Annotation( "ISBN:0517223651") Annotation( "PMID:20395539") Annotation( "http://www.copewithcytokines.de/cope.cgi?key=pancreatic%20acinar%20cells") "A secretory cell found in pancreatic acini that secretes digestive enzymes and mucins. This cell is a typical zymogenic cell, have a basal nucleus and basophilic cytoplasm consisting of regular arrays of granular endoplasmic reticulum with mitochondria and dense secretory granules.") +AnnotationAssertion( ) +AnnotationAssertion(Annotation( "DOI:10.1016/0165-6147(89)90192-2") Annotation( "DOI:10.1038/nrgastro.2013.36") Annotation( "DOI:10.1097/01.mog.0000239863.96833.c0") Annotation( "https://www.ncbi.nlm.nih.gov/books/NBK54134/") "This extended description was generated by ChatGPT and reviewed by the CellGuide team, who added references, and by the CL editors, who approved it for inclusion in CL. It may contain information that applies to only to some subtypes and species, and so should not be considered definitional. + +Pancreatic acinar cells are the functional units of the exocrine pancreas. These cells are structurally arranged in small clusters - or acini - with a small central lumen, and their primary function is to produce and secrete enzymes that facilitate digestion of proteins, carbohydrates, and fats within the small intestine. +Some of the most important digestive enzymes synthesized by the pancreatic acinar cells include amylase, which digests carbohydrates, lipase, which breaks down fats, and several proteases such as trypsin and chymotrypsin which are vital for the digestion of proteins. Importantly, these enzymes are produced as proenzymes or zymogens to avoid autolysis, or the breakdown of the pancreas itself. +The release of these enzymes by the pancreatic acinar cells is strictly regulated by hormones and neurochemicals. Cholecystokinin (CCK) released from the enteroendocrine cells in the duodenum cause the release of these enzymes. Moreover, acinar cells also respond to another hormone, secretin, by releasing bicarbonate-rich fluid which helps to neutralize the gastric acid in the duodenum. +Dysregulation in the function of pancreatic acinar cells can lead to severe health issues, including pancreatitis, which is characterized by inflammatory damage to the organ due to the premature activation of digestive enzymes.") AnnotationAssertion( "BTO:0000028") AnnotationAssertion( "CALOHA:TS-0737") AnnotationAssertion( "FMA:63032") +AnnotationAssertion( "https://cellxgene.cziscience.com/cellguide/CL_0002064") AnnotationAssertion(rdfs:label "pancreatic acinar cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) @@ -9838,7 +11854,14 @@ SubClassOf( ObjectSomeValuesFrom( (type A enteroendocrine cell) AnnotationAssertion(Annotation( "GOC:tfm") Annotation( "ISBN:0412046911") "An enteroendocrine cell that produces glucagon.") +AnnotationAssertion(Annotation( "DOI:10.1016/j.diabres.2018.06.013") Annotation( "DOI:10.1210/en.2016-1748") Annotation( "DOI:10.2337/db15-1541") Annotation( "DOI:10.2337/dbi19-0002") Annotation( "DOI:10.3389/fphys.2012.00349/full") "This extended description was generated by ChatGPT and reviewed by the CellGuide team, who added references, and by the CL editors, who approved it for inclusion in CL. It may contain information that applies to only to some subtypes and species, and so should not be considered definitional. + +Type A enteroendocrine cells, also known as alpha cells or A cells, are a species of endocrine cells primarily located in the pancreatic islets of Langerhans; they have also been identified within the lining of the stomach. Functionally, these cells are pivotal in glucose metabolism and homeostasis, accounting for about 20% of the total population of cells in the pancreatic islets. +The primary role of type A enteroendocrine cells involves the synthesis, storage, and secretion of the peptide hormone glucagon, which is critical in energy regulation throughout the body. In response to a decrease in blood glucose levels, the pancreatic A cells are stimulated to secrete glucagon into the bloodstream. Glucagon acts on its target cells, mainly in the liver, to stimulate glycogenolysis and gluconeogenesis processes, thereby increasing blood glucose levels back to normal. In this way, pancreatic A cells play an integral role in maintaining glucose homeostasis and preventing hypoglycemia. +Pancreatic A cells also participate in the local regulation of islet activities as glucagon acts through glucagon receptors on A, B and D type cells within the islets. Recent studies have also shown that Pancreatic A cells play a role in the generation and regeneration of B type cells. Following beta cell injuries pancreatic A cells increase in numbers and produce Glucagon-like peptide-1 (GLP-1), which increases the proliferation and cytoprotection of beta cells. In response to extreme injury of B type cells pancreatic A cells can transform (transdifferentiate) into functioning B type cells. +Until recently, glucagon has been considered a pancreas-specific hormone; however, extrapancreatic glucagon has been reported in patients who had undergone complete, and glucagon-positive cells been identified in the human stomach, indicating that Type A enteroendocrine cells are not restricted to the pancreas.") AnnotationAssertion( "FMA:62939") +AnnotationAssertion( "https://cellxgene.cziscience.com/cellguide/CL_0002067") AnnotationAssertion(rdfs:label "type A enteroendocrine cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) @@ -9847,6 +11870,7 @@ SubClassOf( (Purkinje myocyte) AnnotationAssertion(Annotation( "FMA:0412046911") Annotation( "GOC:tfm") Annotation( "PMID:19939742") "Specialized cardiac myocyte that is subendocardially interspersed with the regular cardiac muscle cell. They are uninucleate cylindrical cells, associated end-to-end in long rows, continue from the node to the atrioventricular bundle; relatively short compared to ordinary myocytes but are nearly twice their diameter.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0001032") AnnotationAssertion( "FMA:14146") AnnotationAssertion(rdfs:label "Purkinje myocyte") @@ -9875,6 +11899,14 @@ AnnotationAssertion(rdfs:label "myoc SubClassOf( ) SubClassOf( ) +# Class: (brush cell of tracheobronchial tree) + +AnnotationAssertion(Annotation( "GOC:tfm") Annotation( "ISBN:0517223651") Annotation( "PMID:15817800") "Infrequent type of columnar epithelial cell. This cell is characterized by the presence of a tuft of blunt, squat microvilli (approximately 120-140/cell) on the cell surface. The microvilli contain filaments that stretch into the underlying cytoplasm. They have a distinctive pear shape with a wide base and a narrow microvillous apex. Function not known.") +AnnotationAssertion(rdfs:label "brush cell of tracheobronchial tree") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) + # Class: (endo-epithelial cell) AnnotationAssertion(Annotation( "FMA:69075") Annotation( "GOC:tfm") "An epithelial cell derived from endoderm.") @@ -9908,6 +11940,7 @@ SubClassOf( ObjectSomeValuesFrom( (pancreatic ductal cell) AnnotationAssertion(Annotation( "FMA:63099") Annotation( "GOC:tfm") Annotation( "PMID:14740223") "Epithelial cell found in the ducts of the pancreas. This cell type contributes to the high luminal pH.") +AnnotationAssertion( ) AnnotationAssertion( "FMA:63099") AnnotationAssertion(rdfs:label "pancreatic ductal cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) @@ -9919,6 +11952,7 @@ SubClassOf( ObjectSomeValuesFrom( (pancreatic centro-acinar cell) AnnotationAssertion(Annotation( "GOC:tfm") Annotation( "PMID:12142741") Annotation( "PMID:20018761") Annotation( "PMID:8185160") "A cubodial epithelial cell that is continuous with the lining of intercalated ducts that drain the acinus. This cell type secretes a high pH solution to aid in activation of zymogens, and can differentiate into endocrine and exocrine pancreatic cell types.") +AnnotationAssertion( ) AnnotationAssertion( "FMA:62455") AnnotationAssertion(rdfs:label "pancreatic centro-acinar cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) @@ -9945,6 +11979,7 @@ SubClassOf( ObjectSomeValuesFrom( (interstitial cell of Cajal) AnnotationAssertion(Annotation( "GOC:tfm") Annotation( "PMID:16460275") Annotation( "PMID:19520112") "This is a cell found in the gastrointestinal tract of mammals and serves as a pacemaker that triggers gut contraction. ICCs mediate inputs from the enteric nervous system to smooth muscle cells and are thought to be the cells from which gastrointestinal stromal tumors (GISTs) arise.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0003914") AnnotationAssertion( "FMA:86573") AnnotationAssertion(rdfs:comment "Some argue this cell type is of mesenchymal origin.") @@ -9968,6 +12003,7 @@ SubClassOf( ObjectSomeValuesFrom( (hilus cell of ovary) AnnotationAssertion(Annotation( "GOC:tfm") Annotation( "ISBN:068340007X") "A cell in the hilum of the ovary that produces androgens.") +AnnotationAssertion( ) AnnotationAssertion( "FMA:18710") AnnotationAssertion(rdfs:label "hilus cell of ovary") SubClassOf( ) @@ -9995,6 +12031,7 @@ SubClassOf( (capillary endothelial cell) AnnotationAssertion(Annotation( "GOC:tfm") "An endothelial cell found in capillaries.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0004956") AnnotationAssertion( "CALOHA:TS-0112") AnnotationAssertion( "FMA:67756") @@ -10006,8 +12043,16 @@ SubClassOf( ObjectSomeValuesFrom( (ciliated columnar cell of tracheobronchial tree) -AnnotationAssertion(Annotation( "GOC:tfm") Annotation( "ISBN:0517223651") "A ciliated columnar cell found in the trachea and bronchus. Vary from low to tall columnar; possesses up to 300 cilia at its surface, interspersed with long irregular microvilli with the cilia varying in length from about 6um in the trachea to about 4um in the terminal bronchioles; driving force of the ciliary current in the bronchial tree.") +AnnotationAssertion(Annotation( "GOC:tfm") Annotation( "PMID:28400610") "A multi-ciliated epithelial cell located in the trachea and bronchi, characterized by a columnar shape and motile cilia on its apical surface. These cilia facilitate mucociliary clearance by moving mucus and trapped particles toward the pharynx.") +AnnotationAssertion( ) +AnnotationAssertion(Annotation( "DOI:10.1101/cshperspect.a028241") Annotation( "DOI:10.1146/annurev-physiol-021014-071931") Annotation( "DOI:10.1152/ajplung.00329.2019") Annotation( "DOI:10.1159/000196486") "This extended description was generated by ChatGPT and reviewed by the CellGuide team, who added references, and by the CL editors, who approved it for inclusion in CL. It may contain information that applies to only to some subtypes and species, and so should not be considered definitional. + +Ciliated columnar cells of the tracheobronchial tree compose the inner lining of the tracheobronchial tree, the system of airways consisting of trachea, bronchi and bronchioles that allow passage of air into the lungs, where gas exchange occurs. A defining feature of these endo-epithelial cells are the tiny hair-like structures covering their surface, known as cilia. The nucleus is located at the base of the cell, and the area above it is rich in mitochondria and well-developed endoplasmic reticulum, both crucial for the energy-intensive process of cilia operation. +The primary function of these ciliated cells is to keep the respiratory tract clean via mucociliary clearance or the respiratory escalator. These cells create a two-layered 'coat': The lower \"sol\" layer is watery where the cilia can beat in coordinated waves, and the upper \"gel\" layer is thick and sticky, trapping inhaled particles, such as dust, bacteria, viruses, and other potentially harmful substances. This rhythmical beating of the cilia then moves the mucus and trapped particles upwards and out of the respiratory tract, which is then either coughed out or swallowed. +Damage or dysfunction of these ciliated cells, as seen in diseases such as primary ciliary dyskinesia, cystic fibrosis, or chronic bronchitis, may lead to reduced or ineffective mucociliary clearance and an increased susceptibility to respiratory infections.") AnnotationAssertion( "FMA:70542") +AnnotationAssertion( "https://cellxgene.cziscience.com/cellguide/CL_0002145") +AnnotationAssertion(Annotation( ) Annotation( "PMID:25386990") rdfs:comment "These cells possess numerous cilia on their surface, typically ranging from 200 to 300 per cell. The cilia vary in length, measuring between 6 to 7 μm in the upper airways (trachea) and becoming shorter, around 4 μm, in the smaller airways (terminal bronchioles). These cells form a two-layered 'coat' in the airway: the lower 'sol' layer is watery, allowing the cilia to beat in coordinated waves, while the upper 'gel' layer is thick and sticky, trapping inhaled particles.") AnnotationAssertion(rdfs:label "ciliated columnar cell of tracheobronchial tree") SubClassOf( ) SubClassOf( ) @@ -10021,6 +12066,27 @@ AnnotationAssertion( "general ecto-epithelial cell") SubClassOf( ) +# Class: (olfactory epithelial cell) + +AnnotationAssertion(Annotation( "GOC:tfm") Annotation( "PMID:7143026") "A specialized cell involved in sensory perception of smell.") +AnnotationAssertion( "FMA:67870") +AnnotationAssertion(rdfs:label "olfactory epithelial cell") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (keratinized cell of the oral mucosa) + +AnnotationAssertion(Annotation( "GOC:tfm") Annotation( "PMID:12014572") "A keratinized cell located in the hard palate or gingiva.") +AnnotationAssertion(rdfs:label "keratinized cell of the oral mucosa") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (epithelial cell of stomach) AnnotationAssertion(Annotation( "GOC:tfm") "An epithelial cell found in the lining of the stomach.") @@ -10032,12 +12098,12 @@ SubClassOf( ObjectSomeValuesFrom( (mucous cell of stomach) -AnnotationAssertion(Annotation( "GOC:tfm") "A mucous cell in the epithelium of the stomach.") +AnnotationAssertion(Annotation( "GOC:tfm") "An epithelial cell of the stomach. This cell produces mucous.") AnnotationAssertion( "FMA:63464") AnnotationAssertion(rdfs:label "mucous cell of stomach") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (stem cell of gastric gland) @@ -10046,10 +12112,20 @@ AnnotationAssertion( "stem cell of gastric gland") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (basal cell of epidermis) + +AnnotationAssertion(Annotation( "GOC:tfm") Annotation( "ISBN:0517223651") "A basally situated, mitotically active, columnar-shaped keratinocyte attached to the basement membrane.") +AnnotationAssertion( "FMA:70571") +AnnotationAssertion(rdfs:label "basal cell of epidermis") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) + # Class: (granulocytopoietic cell) AnnotationAssertion(Annotation( "GOC:tfm") "A cell involved in the formation of a granulocyte.") @@ -10086,6 +12162,60 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (brush cell of epithelium proper of large intestine) + +AnnotationAssertion(Annotation( "GOC:tfm") "Brush cell found in the epithelial layer of the colon.") +AnnotationAssertion( "FMA:263222") +AnnotationAssertion(rdfs:comment "Brush cells are a distinct cell type from brush border cell-types.") +AnnotationAssertion(rdfs:label "brush cell of epithelium proper of large intestine") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) + +# Class: (brush cell) + +AnnotationAssertion(Annotation( "GOC:tfm") Annotation( "ISBN:0517223651") Annotation( "PMID:15817800") "A cell type found in the gastrointestinal and respiratory tracts that is characterized by the presence of a tuft of blunt, squat microvilli (120-140 per cell). Function of this cell type is not known.") +AnnotationAssertion(Annotation( "DOI:10.1007/978-3-211-99390-3_83") Annotation( "DOI:10.1038/nature16161") Annotation( "DOI:10.1111/j.1469-7580.2005.00403.x") Annotation( "DOI:10.3389/fphys.2015.00087") Annotation( "DOI:10.5114/ceji.2022.124416") "This extended description was generated by ChatGPT and reviewed by the CellGuide team, who added references, and by the CL editors, who approved it for inclusion in CL. It may contain information that applies to only to some subtypes and species, and so should not be considered definitional. + +Brush cells, also referred to as tuft cells or multivesicular cells, are a specialized type of epithelial cell mainly noted for their characteristic 'brush border' composed of microvilli. These cells reside in the epithelial lining of tissue organs such as the respiratory tract, gastrointestinal tract, and the bile ducts. The name derives from their distinct appearance under the microscope, which resembles a brush due to the dense layer of microvilli protruding into the lumen. +A key function of brush cells is chemosensation: They express a variety of signaling molecules and receptors that enable them to detect specific chemical stimuli in the environment and act as sensory transducers. Many of these receptors are responsive to luminal content, which makes brush cells vital for regulating and coordinating appropriate physiological responses to changes in these substances. +Recent research has also elucidated an important role for these cells in immunity. Intestinal brush cells have been found to be the source of a cytokine called interleukin-25, which can initiate type 2 immune responses during parasitic infections. This immune function, along with the chemosensing abilities, signifies that brush cells could serve crucial roles in health and disease, although much research is still required to fully elucidate their myriad roles in physiology and pathology. Overall, brush cells are a versatile cell type, whose distinct morphology and functional capabilities allow them to perform a unique set of functions within the body.") +AnnotationAssertion( "FMA:67978") +AnnotationAssertion( "https://cellxgene.cziscience.com/cellguide/CL_0002204") +AnnotationAssertion(rdfs:label "brush cell") +SubClassOf( ) + +# Class: (brush cell of terminal bronchiole) + +AnnotationAssertion(Annotation( "GOC:tfm") "A brush cell of the epithelium in the terminal bronchiole.") +AnnotationAssertion( "FMA:263228") +AnnotationAssertion(rdfs:label "brush cell of terminal bronchiole") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (brush cell of trachea) + +AnnotationAssertion(Annotation( "GOC:tfm") "Brush cell of the epithelium in the trachea.") +AnnotationAssertion( ) +AnnotationAssertion( "FMA:263224") +AnnotationAssertion(rdfs:label "brush cell of trachea") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (brush cell of bronchus) + +AnnotationAssertion(Annotation( "GOC:tfm") "A brush cell found in the epithelium of bronchus.") +AnnotationAssertion( ) +AnnotationAssertion( "FMA:263226") +AnnotationAssertion(rdfs:label "brush cell of bronchus") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) + # Class: (intermediate epitheliocyte) AnnotationAssertion(Annotation( "GOC:tfm") Annotation( "ISBN:0517223651") "An epithelial cell present in the trachea and bronchi; columnar in shape; generally lack cilia; immature forms of ciliated or secretory cells which have been formed from stem cells.") @@ -10105,6 +12235,7 @@ SubClassOf( ObjectSomeValuesFrom( (lens epithelial cell) AnnotationAssertion(Annotation( "GOC:tfm") Annotation( "ISBN:0721662544") Annotation( "http://en.wikipedia.org/wiki/Lens_%28anatomy%29#Lens_epithelium") "A cell of the cuboidal epithelium that covers the lens. The cells of the lens epithelium regulate most of the homeostatic functions of the lens. As ions, nutrients, and liquid enter the lens from the aqueous humor, Na+/K+ ATPase pumps in the lens epithelial cells pump ions out of the lens to maintain appropriate lens osmolarity and volume, with equatorially positioned lens epithelium cells contributing most to this current. The activity of the Na+/K+ ATPases keeps water and current flowing through the lens from the poles and exiting through the equatorial regions. The cells of the lens epithelium also serve as the progenitors for new lens fibers. It constantly lays down fibers in the embryo, fetus, infant, and adult, and continues to lay down fibers for lifelong growth.") +AnnotationAssertion( ) AnnotationAssertion( "FMA:67559") AnnotationAssertion(rdfs:label "lens epithelial cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) @@ -10198,9 +12329,17 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (endothelial cell of viscerocranial mucosa) + +AnnotationAssertion(Annotation( "GOC:tfm") Annotation( "ISBN:0618947256") "An endothelial cell found in the mucosa associated with the facial skeleton.") +AnnotationAssertion( "FMA:70627") +AnnotationAssertion(rdfs:label "endothelial cell of viscerocranial mucosa") +SubClassOf( ) + # Class: (endothelial cell of sinusoid) AnnotationAssertion(Annotation( "GOC:tfm") Annotation( "ISBN:0618947256") "An endothelial cell that lines any of the venous cavities through which blood passes in various glands and organs such as the spleen and liver.") +AnnotationAssertion( ) AnnotationAssertion( "FMA:63134") AnnotationAssertion(rdfs:label "endothelial cell of sinusoid") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) @@ -10246,9 +12385,16 @@ SubClassOf( (pancreatic PP cell) AnnotationAssertion(Annotation( "GOC:tfm") "A PP cell located in the islets of the pancreas.") +AnnotationAssertion( ) +AnnotationAssertion(Annotation( "DOI:10.1016/B978-0-12-819402-7.00001-2") Annotation( "DOI:10.1016/B978-012369442-3/50154-9") Annotation( "DOI:10.1016/j.mce.2015.06.028") Annotation( "DOI:10.1038/s42255-019-0148-2") Annotation( "DOI:10.3389/fendo.2023.1192311") "This extended description was generated by ChatGPT and reviewed by the CellGuide team, who added references, and by the CL editors, who approved it for inclusion in CL. It may contain information that applies to only to some subtypes and species, and so should not be considered definitional. + +Pancreatic polypeptide (PP) cells (also called F or gamma cells) are unique endocrine cells located within the Islets of Langerhans in the pancreas. PP cells are one of the rarer pancreatic cell types and are more prevalent in the head and neck of the pancreas. They are critical in normal pancreatic physiological functions and are involved in the development of pancreatic endocrine disorders. +The primary function of PP cells is the production and secretion of the pancreatic polypeptide hormone (PP). This hormone plays a crucial role in several gastrointestinal functions and metabolic responses. The release of the PP hormone is stimulated after eating, especially in protein-rich meals, leading to it being present in large amounts during digestion. The fundamental role of PP is to self-regulate pancreatic secretion activities ensuring its exocrine and endocrine functions are under control. +The pancreatic polypeptide hormone from PP cells also aids in adapting to low physical activity and fasting by reducing the production of insulin and glucagon and inhibiting the hepatic glucose production. Additionally, this hormone influences gut motility by slowing down the gastric emptying and reducing small intestinal transit, thereby controlling the pace at which nutritional substances are absorbed. Because of these functions, any malfunction or irregularity in PP cells can result in various disorders such as diabetes and pancreatic diseases.") AnnotationAssertion( "BTO:0000805") AnnotationAssertion( "FMA:70588") AnnotationAssertion( "MESH:D050418") +AnnotationAssertion( "https://cellxgene.cziscience.com/cellguide/CL_0002275") AnnotationAssertion(rdfs:comment "The term PP cell of pancreatic acinus was obsoleted due to a lack of evidence, making PP cell of pancreatic islets synonymous with pancreatic PP cell.") AnnotationAssertion(rdfs:label "pancreatic PP cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) @@ -10272,7 +12418,7 @@ AnnotationAssertion( "FMA:70333") AnnotationAssertion(rdfs:label "neural cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (connective tissue cell) @@ -10283,7 +12429,7 @@ AnnotationAssertion( "MESH:D003239") AnnotationAssertion(rdfs:label "connective tissue cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (embryonic cell (metazoa)) @@ -10304,11 +12450,25 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (basal epithelial cell of tracheobronchial tree) + +AnnotationAssertion(Annotation( "GOC:tfm") "An epithelial cell type that lacks the columnar shape typical for other respiratory epithelial cells. This cell type is able to differentiate into other respiratory epithelial cells in response to injury.") +AnnotationAssertion( ) +AnnotationAssertion(Annotation( "DOI:10.1165/rcmb.2013-0049OC") Annotation( "DOI:10.1186/s12931-014-0160-8") Annotation( "DOI:10.2353/ajpath.2010.090870") "This extended description was generated by ChatGPT and reviewed by the CellGuide team, who added references, and by the CL editors, who approved it for inclusion in CL. It may contain information that applies to only to some subtypes and species, and so should not be considered definitional. + +The basal epithelial cells of the tracheobronchial tree are critical components found in the lining of the airway passages, including the trachea and bronchi. They are keratin-5-positive, nonciliated, cuboidal cells and typically tightly attached to the basement membrane. In humans, the proportion of basal cells in the respiratory epithelium gradually decreases going down the tracheobronchial tree: they represent approximately 34% of the cells in the trachea, 27% in the large airways, and 10% in the small airways, although it is worth noting that there are differences in the compositions of the tracheobronchial epithelia between different species. +Basal epithelial cells serve as the basal layer of the tracheobronchial epithelium, providing both structural and regenerative support for the epithelial tissue that lines the upper regions of the respiratory tract. They serve as progenitor or stem cells that are capable of differentiating into multiple cell types, such as ciliated and secretory cells. This gives them a central role in homeostatic maintenance of the epithelium, and in repairing damaged epithelium after an injury or during disease. This regenerative capacity is crucial in maintaining the integrity of the tracheobronchial surface, especially given its continual exposure to inhaled irritants and microorganisms. +In addition to their primary restorative function, basal epithelial cells are also involved in the initial immune response within the tracheobronchial tree. Equipped with pattern recognition receptors, these cells can identify and respond to pathogenic organisms, triggering an immune response and producing a range of inflammatory mediators, such as cytokines and chemokines, to help combat infections.") +AnnotationAssertion( "https://cellxgene.cziscience.com/cellguide/CL_0002329") +AnnotationAssertion(rdfs:label "basal epithelial cell of tracheobronchial tree") +SubClassOf( ) + # Class: (ciliated cell of the bronchus) AnnotationAssertion(Annotation( "GOC:tfm") Annotation( "PMID:18757316") "A ciliated cell of the bronchus.") +AnnotationAssertion( ) AnnotationAssertion(rdfs:label "ciliated cell of the bronchus") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -10320,9 +12480,16 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (buccal mucosa cell) + +AnnotationAssertion(Annotation( "GOC:tfm") Annotation( "MESH:D009061") "An endothelial cell that lines the oral cavitiy including the mucosa of the gums, the palate, the lip, and the cheek.") +AnnotationAssertion(rdfs:label "buccal mucosa cell") +SubClassOf( ) + # Class: (endocardial cell) AnnotationAssertion(Annotation( "GOC:tfm") Annotation( "ISSN:0452-3458") "An endothelial cell that lines the intracavitary lumen of the heart, separating the circulating blood from the underlying myocardium. This cell type releases a number of vasoactive substances including prostacyclin, nitrous oxide and endothelin.") +AnnotationAssertion( ) AnnotationAssertion( "FMA:75621") AnnotationAssertion(rdfs:label "endocardial cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) @@ -10343,9 +12510,18 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (cerebellar granule cell precursor) + +AnnotationAssertion(Annotation( "GOC:tfm") Annotation( "PMID:14745007") "A cell located in the outermost proliferative zone of the external germinal layer that can differentiate into astroglial cells and granule cells. This cell type is glial fibrillary acidic protein-positive and HNK1-positive.") +AnnotationAssertion(rdfs:label "cerebellar granule cell precursor") +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (keratocyte) AnnotationAssertion(Annotation( "GOC:tfm") Annotation( "ISBN:9780702029585") "A keratocyte is a specialized fibroblast residing in the cornea stroma that has a flattened, dendritic morphology; located between the lamellae with a large flattened nucleus, and lengthy processes which communicate with neighboring cells. This corneal layer, representing about 85-90% of corneal thickness, is built up from highly regular collagenous lamellae and extracellular matrix components. Keratocytes play the major role in keeping it transparent, healing its wounds, and synthesizing its components. This cell type secretes collagen I, V, VI, and keratan sulfate.") +AnnotationAssertion( ) AnnotationAssertion(rdfs:label "keratocyte") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) @@ -10360,15 +12536,46 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (respiratory goblet cell) + +AnnotationAssertion(Annotation( "GOC:tfm") Annotation( "ISBN:0721662544") "A simple columnar epithelial cell that secretes mucin. Rough endoplasmic reticulum, mitochondria, the nucleus, and other organelles are concentrated in the basal portion. The apical plasma membrane projects microvilli to increase surface area for secretion.") +AnnotationAssertion(Annotation( "DOI:10.1016/S1357-2725(02)00083-3") Annotation( "DOI:10.1111/febs.15731") Annotation( "DOI:10.1165/ajrcmb.25.5.f218") Annotation( "DOI:10.2147/COPD.S38938") Annotation( "DOI:10.3109/01902148.2013.791733") "This extended description was generated by ChatGPT and reviewed by the CellGuide team, who added references, and by the CL editors, who approved it for inclusion in CL. It may contain information that applies to only to some subtypes and species, and so should not be considered definitional. + +The respiratory goblet cell is a highly specialized cell type found primarily within the respiratory tract, including the nose, trachea, and lungs. Named because their shape resembles a goblet - a drinking vessel with a wide body and narrow neck - these cells form a vital part of the respiratory system's protective mechanisms. They are found within the columnar epithelium lining these organs, which forms a barrier between the internal body and the exterior environment. +A principal function of the respiratory goblet cell is the production and secretion of mucus, a carbohydrate-rich, viscous and gel-like substance that plays a critical role in trapping dust, bacteria, viruses, and other airborne particles that are inhaled. The mucus secreted by the goblet cells covers the lining of the respiratory tract, effectively catching these particles and preventing them from reaching the lungs and causing infection. Mucus also provides hydration and lubrication to the respiratory tract surfaces, which is important in maintaining the tissue's health and functioning. +In addition to their mucus-secreting capabilities, respiratory goblet cells also play a significant role in the body's inflammatory responses. When the respiratory system is exposed to irritants or pathogens, the number and activity of goblet cells often increase, leading to a higher production of mucus. This is a protective response designed to trap and neutralize the harmful substances more effectively. However, in conditions like chronic obstructive pulmonary disease (COPD) and asthma, an overproliferation of goblet cells, also known as goblet cell hyperplasia, can lead to excessive mucus production and airway obstruction.") +AnnotationAssertion( "https://cellxgene.cziscience.com/cellguide/CL_0002370") +AnnotationAssertion(rdfs:label "respiratory goblet cell") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) + # Class: (myotube) -AnnotationAssertion(Annotation( "GOC:dos") Annotation( "GOC:tfm") Annotation( "ISBN:0323052908") Annotation( "PMID:22274696") "A transversely striated, synctial muscle cell, formed by the fusion of myoblasts.") +AnnotationAssertion(Annotation( "GOC:dos") Annotation( "GOC:tfm") Annotation( "ISBN:0323052908") Annotation( "PMID:22274696") "A transversely striated, multinucleated syncytial muscle cell, formed by the fusion of myoblasts during muscle development.") AnnotationAssertion(rdfs:label "myotube") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (Schwann cell precursor) + +AnnotationAssertion(Annotation( "GOC:tfm") Annotation( "PMID:15580626") Annotation( "PMID:30971890") Annotation( "PMID:35815410") "A multipotent progenitor cell that develops from a migratory neural crest cell. The schwann cell precursor is embedded among axons, with minimal extracellular space separating them from nerve cell membranes. This cell lacks a basal lamina, which distinguishes it from more mature Schwann cells. In rodents, cadherin-19 (Cdh19) serves as a specific marker for this developmental stage.") +AnnotationAssertion(Annotation( "PMID:35815410") rdfs:comment "Schwann cell precursor are capable of differentiating into Schwann cells and other cell types such as melanocytes, neurons, and mesenchymal cells.") +AnnotationAssertion(rdfs:label "Schwann cell precursor") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (immature Schwann cell) + +AnnotationAssertion(Annotation( "GOC:cvs") Annotation( "GOC:tfm") Annotation( "ISBN:0721662544") "A glial cell that develops from a Schwann cell precursor. The immature Schwann cell is embedded among neurons (axons) with minimal extracellular spaces separating them from nerve cell membranes and has a basal lamina. Cells can survive without an axon present. Immature Schwann cell can be found communally ensheathing large groups of axons.") +AnnotationAssertion(rdfs:label "immature Schwann cell") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (CD14-positive, CD16-positive monocyte) AnnotationAssertion(Annotation( "GOC:tfm") Annotation( "PMID:20628149") Annotation( "PMID:21937707") Annotation( "PMID:22343568") "A CD14-positive monocyte that is also CD16-positive and CCR2-negative.") @@ -10387,6 +12594,17 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) +# Class: (oligodendrocyte precursor cell) + +AnnotationAssertion(Annotation( "GOC:tfm") Annotation( "PMID:10704434") Annotation( "PMID:11756508") Annotation( "PMID:20142420") Annotation( "PMID:2182078") Annotation( "PMID:24133281") Annotation( "PMID:9826671") "A progenitor cell of the central nervous system that can differentiate into oligodendrocytes or type-2 astrocytes. This cell originates from multiple structures within the developing brain including the medial ganglion eminence and the lateral ganglionic eminence. These cells migrate throughout the central nervous system and persist into adulthood where they play an important role in remyelination of injured neurons.") +AnnotationAssertion( ) +AnnotationAssertion(Annotation( "ISBN:9780702028991") Annotation( "PMID:10704434") Annotation( "PMID:2182078") "This cell type can be purified from optic nerves and other regions of the embryonic, postnatal and adult rat CNS and can be differentiated in vitro to oligodendrocytes and type-2 astrocytes. Some references use the terms 'oligodendrocyte precursor cell' and 'oligodendrocyte type-2 astrocyte (O-2A) progenitor' to refer to the same entity (e.g., PMID:10704434), while others describe an oligodendrocyte type-2 astrocyte (O-2A) progenitor cell as the precurosr to oligodendrocyte- and type-2 astrocyte- progenitor cells (e.g, ISBN:9780702028991).") +AnnotationAssertion( "MESH:D000073637") +AnnotationAssertion(rdfs:label "oligodendrocyte precursor cell") +SubClassOf( ) +SubClassOf( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (Cd4-negative, CD8_alpha-negative, CD11b-positive dendritic cell) AnnotationAssertion(Annotation( "GOC:tfm") Annotation( "http://www.immgen.org/index_content.html") "Cd4-negative, CD8_alpha-negative, CD11b-positive dendritic cell is a conventional dendritic cell that is CD11b-positive, CD4-negative, CD8_alpha-negative and is CD205-positive.") @@ -10432,6 +12650,50 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (nasal mucosa goblet cell) + +AnnotationAssertion(Annotation( "GOC:cjm") Annotation( "GOC:tfm") "A goblet cell located in the nasal epithelium.") +AnnotationAssertion( "MP:0002262") +AnnotationAssertion(rdfs:label "nasal mucosa goblet cell") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (dermal melanocyte) + +AnnotationAssertion(Annotation( "GOC:cjm") Annotation( "GOC:tfm") Annotation( "MP:0009386") "A melanocyte that produces pigment in the dermis.") +AnnotationAssertion(rdfs:label "dermal melanocyte") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (epithelial melanocyte) + +AnnotationAssertion(Annotation( "GOC:tfm") Annotation( "MP:0009388") "A melanocyte that produces pigment in the epithelium.") +AnnotationAssertion(rdfs:comment "The text defintion reference to the MP term appears to reference an epidermal melanocyte term. This term represents any melanocyte in any epithelium.") +AnnotationAssertion(rdfs:label "epithelial melanocyte") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (retinal melanocyte) + +AnnotationAssertion(Annotation( "GOC:tfm") Annotation( "MP:0010190") "A melanocyte of the retina. This cell type is distinct from pigmented retinal epithelium.") +AnnotationAssertion(rdfs:label "retinal melanocyte") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (auditory epithelial cell) + +AnnotationAssertion(Annotation( "GOC:tfm") "A specialized cell involved in auditory sensory perception.") +AnnotationAssertion(rdfs:label "auditory epithelial cell") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (cardiocyte) AnnotationAssertion(Annotation( "GOC:tfm") "A cell located in the heart, including both muscle and non muscle cells.") @@ -10442,7 +12704,7 @@ AnnotationAssertion( "From Onard of the FMA: Cardiac muscle cell or cardiac myocyte is a striated muscle cell. Cardiocyte on the other hand is any cell in the heart which includes cells other than muscle cells (e.g. endothelial cell of endocardium). Unless there is a consensus among anatomists that cardiocytes refer only to muscle cells, we will treat them as a general class of cells in the heart.") AnnotationAssertion(rdfs:label "cardiocyte") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (adventitial cell) @@ -10467,6 +12729,7 @@ SubClassOf( ObjectSomeValuesFrom( (subcutaneous adipocyte) AnnotationAssertion(Annotation( "GOC:tfm") "An adipocyte that is part of subcutaneous adipose tissue.") +AnnotationAssertion( ) AnnotationAssertion(rdfs:label "subcutaneous adipocyte") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) @@ -10475,6 +12738,13 @@ SubClassOf( ObjectSomeValuesFrom( (intrahepatic cholangiocyte) AnnotationAssertion(Annotation( "GOC:tfm") Annotation( "PMID:23720296") "An epithelial cell of the intrahepatic portion of the bile duct. These cells are flattened or cuboidal in shape, and have a small nuclear-to-cytoplasmic ratio relative to large/extrahepatic cholangiocytes.") +AnnotationAssertion(Annotation( "DOI:10.1002/hep.31252") Annotation( "DOI:10.1016/j.ajpath.2023.02.012") Annotation( "DOI:10.1016/j.biocel.2010.06.020") Annotation( "DOI:10.1016/j.gastha.2022.07.015") "This extended description was generated by ChatGPT and reviewed by the CellGuide team, who added references, and by the CL editors, who approved it for inclusion in CL. It may contain information that applies to only to some subtypes and species, and so should not be considered definitional. + +Intrahepatic cholangiocytes represent a subset of the biliary epithelial cells that form a network of tubes in the liver called the biliary tree The intrahepatic cholangiocytes reside specifically in the intrahepatic bile ducts and play a crucial role in liver physiology and bile production and secretion, thereby aiding in the digestion and absorption of fats in the small intestine. These specific cholangiocytes arise from bipotent hepatoblasts, whereas extrahepatic cholangiocytes share an embryologic origin with the ventral pancreas. +Recent research suggests that there is also heterogeneity within populations of intrahepatic cholangiocytes with different transcriptional profiles, proliferative capacity, and biological function; for example, subpopulations differ in calcium-mobilizing receptors. +The primary function of intrahepatic cholangiocytes is related to bile formation and maintenance of its flow. In addition to their secretory and absorptive activities, they are involved in the regulation of bile composition, volume, and alkalinization, contributing to the neutralization of the acidic chyme (partly digested food) that enters the intestine from the stomach. Intrahepatic cholangiocytes are also recognized for their role in liver regeneration and repair, often proliferating in response to injury. +Intrahepatic cholangiocytes take part in certain pathological conditions, like primary biliary cirrhosis and cholangiocarcinoma. Changes in these cells often lead to abnormalities in bile formation and transport, causing cholestatic liver diseases. Overall, the primary and secondary functional activities of intrahepatic cholangiocytes are vital in maintaining liver function, digestive processes, and contributing to the body's response to liver injury.") +AnnotationAssertion( "https://cellxgene.cziscience.com/cellguide/CL_0002538") AnnotationAssertion(rdfs:label "intrahepatic cholangiocyte") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) @@ -10500,20 +12770,20 @@ SubClassOf( (vein endothelial cell) AnnotationAssertion(Annotation( "GOC:tfm") "An endothelial cell that is part of the vein.") +AnnotationAssertion( ) +AnnotationAssertion(Annotation( "DOI:10.1007/s00441-008-0706-5") Annotation( "DOI:10.1038/s41569-022-00770-1") Annotation( "DOI:10.1038/s41598-021-01360-w") Annotation( "DOI:10.3390/ijms20184411") "This extended description was generated by ChatGPT and reviewed by the CellGuide team, who added references, and by the CL editors, who approved it for inclusion in CL. It may contain information that applies to only to some subtypes and species, and so should not be considered definitional. + +Vein endothelial cells form a thin layer of squamous cells, the endothelium, lining the interior surface of veins throughout the body. They shape the inner cellular lining of the entire vascular system, including the heart, playing a crucial role in blood circulation. The unique characteristic compact arrangement of these cells enables veins to act as a barrier between the blood (that can contain foreign substances) and the surrounding venous tissue and maintain the integrity of the vascular system. +The primary function of vein endothelial cells is to control the exchange of substances between the bloodstream and the surrounding tissues. They facilitate selective transportation of molecules depending on their size and solubility, including gases, nutrients, hormones, and waste products. Vein endothelial cells also play a protective role by inhibiting the translocation of toxins or pathogens from blood to tissues. Additionally, these cells are involved in blood coagulation and inflammation response, primarily by producing substances that inhibit blood clot formation under normal conditions and initiating clotting when necessary. +Another significant function of vein endothelial cells is the regulation of blood flow and blood pressure. They produce and release several substances, including nitric oxide and prostacyclin, which help in controlling vasodilation and vasoconstriction, thereby regulating blood pressure. These cells are also responsible for angiogenesis, the formation of new blood vessels, which is crucial during wound healing and in the formation of granulation tissue. Consequently, any dysfunction in vein endothelial cells can lead to severe health problems like atherosclerosis, hypertension, and thrombosis.") AnnotationAssertion( "FMA:62104") AnnotationAssertion( "KUPO:0001099") +AnnotationAssertion( "https://cellxgene.cziscience.com/cellguide/CL_0002543") AnnotationAssertion(rdfs:label "vein endothelial cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (embryonic blood vessel endothelial progenitor cell) - -AnnotationAssertion(Annotation( "GOC:tfm") "An endothelial progenitor cell that participates in angiogenesis during development.") -AnnotationAssertion(rdfs:comment "See CL:0002619.") -AnnotationAssertion(rdfs:label "embryonic blood vessel endothelial progenitor cell") -SubClassOf( ) - # Class: (fibroblast of the aortic adventitia) AnnotationAssertion(Annotation( "GOC:tfm") "A fibroblast of the aortic adventitia.") @@ -10531,6 +12801,15 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (fibroblast of choroid plexus) + +AnnotationAssertion(Annotation( "GOC:tfm") "A fibroblast that is part of the choroid plexus.") +AnnotationAssertion(rdfs:label "fibroblast of choroid plexus") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (fibroblast of dermis) AnnotationAssertion(Annotation( "FBC:Autogenerated") "Any skin fibroblast that is part of some dermis.") @@ -10552,6 +12831,7 @@ SubClassOf( ObjectSomeValuesFrom( (fibroblast of pulmonary artery) AnnotationAssertion(Annotation( "GOC:tfm") "A fibroblast of pulmonary artery.") +AnnotationAssertion( ) AnnotationAssertion(rdfs:label "fibroblast of pulmonary artery") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) @@ -10568,6 +12848,12 @@ SubClassOf( ObjectSomeValuesFrom( (mesenchymal stem cell of adipose tissue) AnnotationAssertion(Annotation( "GOC:tfm") "A mesenchymal stem cell of adipose tissue.") +AnnotationAssertion(Annotation( "DOI:10.1016/j.biopha.2019.108765") Annotation( "DOI:10.1016/j.tibtech.2006.01.010") Annotation( "DOI:10.1038/s41536-019-0083-6") Annotation( "DOI:10.1096/fj.202100332R") Annotation( "DOI:10.1111/dgd.12049") "This extended description was generated by ChatGPT and reviewed by the CellGuide team, who added references, and by the CL editors, who approved it for inclusion in CL. It may contain information that applies to only to some subtypes and species, and so should not be considered definitional. + +Mesenchymal stem cells of adipose tissue, also known commonly as adipose-derived stem cells (ADSCs), are a population of adult stem cells that can be obtained easily from adipose tissues. They have many of the same regenerative properties as other mesenchymal stem cells, but are more easily accessible than bone marrow-derived stem cells. +Adipose-derived stem cells show immense promise in the field of regenerative medicine due to their ability to differentiate into adipocytes, chondrocytes, myocytes, osteoblasts, and other cell types. ADSCs also possess immunomodulatory and homeostatic functions: they have the ability to suppress immune responses and provide a therapeutic environment for tissue repair and regeneration, as well as supporting the proliferation of adipocytes and the overall expansion of adipose tissue and contributing to the tissue's ability to react to demands of energy storage and mobilization. Dysfunction of these cells may contribute to metabolic complications observed in obesity and diabetes. +ADSCs have been used for therapeutic applications such as pathological wound healing, severe refractory acute graft-versus-host disease, and idiopathic thrombocytopenic purpura.") +AnnotationAssertion( "https://cellxgene.cziscience.com/cellguide/CL_0002570") AnnotationAssertion(rdfs:label "mesenchymal stem cell of adipose tissue") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) @@ -10590,9 +12876,28 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (Schwann cell) + +AnnotationAssertion(Annotation( "GOC:tfm") Annotation( "PMID:16807057") "A glial cell that myelinates or ensheathes axons in the peripheral nervous system.") +AnnotationAssertion( ) +AnnotationAssertion(Annotation( "DOI:10.1002/glia.23892") Annotation( "DOI:10.1016/B978-0-444-52902-2.00005-9") Annotation( "DOI:10.1016/j.biocel.2006.05.007") Annotation( "DOI:10.1186/1742-2094-8-110") Annotation( "DOI:10.1186/s13064-020-00140-y") "This extended description was generated by ChatGPT and reviewed by the CellGuide team, who added references, and by the CL editors, who approved it for inclusion in CL. It may contain information that applies to only to some subtypes and species, and so should not be considered definitional. + +Schwann cells, also known as neurolemmocytes, are a type of glial cell located in the peripheral nervous system. These cells play a significant role in the healthy functioning of nerves by producing myelin, a fatty substance that forms a coating around nerve fibers. Myelin serves as an insulator and enhances the speed and efficiency of electrical nerve impulses; a single Schwann cell can myelinate a single axon. Myelination starts by the elongation and envelopment of the Schwann cell around the axon, followed by the synthesis and deposition of myelin layers. Some studies suggest that Schwann cells may regulate neuronal action potential, muscular contraction, and the sensitive response. +While Schwann cells are most commonly known for the formation of the myelin sheath, some Schwann cells do not form myelin: Remak Schwann cells, a class of nonmyelinating Schwann cells, ensheath axons with smaller diameter, such as C fiber nociceptors in sciatic nerves and form Remak bundles. +Schwann cells are found along both motor and sensory neurons and are crucial for the advancement and recovery of peripheral nerve injuries, due to their capacity to support nerve regeneration. In cases of nerve injury, Schwann cells play a vital role in recovery by initiating Wallerian degeneration, a process in which the part of the axon distal to the injury site degrades and is then cleared away. Following this, Schwann cells can guide the regrowth of the nerve, providing a conducive environment for axon regeneration. They remodel themselves into a regenerative phenotype, proliferate, and organize themselves into bands of Büngner that provide physical and chemical guidance for the regrowths of axons. This function of Schwann cells in the repair and regeneration of nervous system highlights their therapeutic potential in peripheral nerve injury treatments.") +AnnotationAssertion( "BTO:0001220") +AnnotationAssertion( "CALOHA:TS-0898") +AnnotationAssertion( "MESH:D012583") +AnnotationAssertion( "https://cellxgene.cziscience.com/cellguide/CL_0002573") +AnnotationAssertion(Annotation( "PMID:16807057") rdfs:comment "A myelinating Schwann cell wraps around a single axon. Myelination occurs in larger diameter axons, while a process called ensheathment occurs on smaller diameter axons in which a single cell wraps around multiple small, unmyelinated axons separating them with a thin layer of cytoplasm. The structure formed is called a Remak bundle.") +AnnotationAssertion(rdfs:label "Schwann cell") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (stromal cell of pancreas) AnnotationAssertion(Annotation( "GOC:tfm") "A stromal cell of the pancreas.") +AnnotationAssertion( ) AnnotationAssertion(rdfs:label "stromal cell of pancreas") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) @@ -10610,6 +12915,13 @@ SubClassOf( ObjectSomeValuesFrom( (retinal blood vessel endothelial cell) AnnotationAssertion(Annotation( "GOC:tfm") "A blood vessel endothelial cell that is part of the retina.") +AnnotationAssertion( ) +AnnotationAssertion(Annotation( "DOI:0.1016/j.preteyeres.2015.08.001") Annotation( "DOI:10.1016/j.preteyeres.2012.08.004") Annotation( "DOI:10.1038/nature04482") Annotation( "DOI:10.5301/EJO.2010.6049") "This extended description was generated by ChatGPT and reviewed by the CellGuide team, who added references, and by the CL editors, who approved it for inclusion in CL. It may contain information that applies to only to some subtypes and species, and so should not be considered definitional. + +Retinal blood vessel endothelial cells constitute the innermost lining of the blood vessels found in the retina, the light-sensitive layer of tissue at the back of the eye. The primary role of these cells revolves around their location within the retinal vascular system, forming the structure of the blood-retinal barrier, a subset of the larger blood-ocular barrier system. +The endothelial cells are particularly involved in the growth of new retinal blood vessels from pre-existing ones (angiogenesis); this is critical in managing the amount of oxygen and essential nutrients delivered to the ocular tissues. They are crucial for maintaining homeostasis in the retinal environment by controlling the exchange of molecules between the blood and the retina. Furthermore, they mediate immune cell trafficking, supporting the immune privilege of the eye by preventing the unrestricted infiltration of inflammatory cells into the retina, thus maintaining ocular health and normal vision. +The malfunction or dysfunction of retinal blood vessel endothelial cells is implicated in numerous ocular pathologies, particularly diabetic retinopathy, which is one of the leading causes of blindness worldwide. In such conditions, the compromise in the integrity of the blood-retinal barrier and excess angiogenesis can lead to retinal edema and pathological neovascularization, resulting in vision loss.") +AnnotationAssertion( "https://cellxgene.cziscience.com/cellguide/CL_0002585") AnnotationAssertion(rdfs:label "retinal blood vessel endothelial cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) @@ -10636,6 +12948,7 @@ SubClassOf( ObjectSomeValuesFrom( (smooth muscle cell of the pulmonary artery) AnnotationAssertion(Annotation( "GOC:tfm") "A smooth muscle of the pulmonary artery.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0003336") AnnotationAssertion(rdfs:label "smooth muscle cell of the pulmonary artery") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) @@ -10661,6 +12974,7 @@ SubClassOf( ObjectSomeValuesFrom( (bronchial smooth muscle cell) AnnotationAssertion(Annotation( "FBC:Autogenerated") "Any smooth muscle cell that is part of some bronchus.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0004402") AnnotationAssertion(rdfs:label "bronchial smooth muscle cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) @@ -10704,6 +13018,7 @@ SubClassOf( ObjectSomeValuesFrom( (skin fibroblast) AnnotationAssertion(Annotation( "GOC:tfm") "A fibroblast of skin.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0001255") AnnotationAssertion( "CALOHA:TS-0935") AnnotationAssertion(rdfs:label "skin fibroblast") @@ -10711,6 +13026,14 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (epithelial cell of upper respiratory tract) + +AnnotationAssertion(Annotation( "FBC:Autogenerated") "Any epithelial cell that is part of some upper respiratory tract epithelium.") +AnnotationAssertion(rdfs:label "epithelial cell of upper respiratory tract") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (epithelial cell of lower respiratory tract) AnnotationAssertion(Annotation( "FBC:Autogenerated") "Any epithelial cell that is part of some lower respiratory tract epithelium.") @@ -10719,6 +13042,37 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (respiratory basal cell) + +AnnotationAssertion(Annotation( "GOC:tfm") Annotation( "PMID:20699479") "A basal cell in the respiratory tract.") +AnnotationAssertion(Annotation( "DOI:10.1186/s12931-022-02042-5") Annotation( "DOI:10.3389/falgy.2021.787128") Annotation( "DOI:110.1038/s41385-020-00370-7") "This extended description was generated by ChatGPT and reviewed by the CellGuide team, who added references, and by the CL editors, who approved it for inclusion in CL. It may contain information that applies to only to some subtypes and species, and so should not be considered definitional. + +Respiratory basal cells are highly specialized cells that serve a crucial role in the human airway epithelium, predominantly found lining the surfaces of the trachea and bronchi. These cells exhibit a distinctive columnar shape and are attached directly to the basal lamina. They are characterized by the presence of high amounts of cytoplasmic keratins, predominantly keratin 5 and 14, and transcription factor tumor protein (tp63), which set them apart from other types of lung epithelial cells such as ciliated cells and secretory cells. +Basal cells are essential for maintaining airway integrity. They make up one third of all respiratory epithelial cells and serve as stem cells as they can transform into different cell types, like goblet cells, ciliated cells, and club cells, when needed for homeostatic maintenance of the epithelial barrier or to repair and restore a healthy cellular environment after injury. +Their position at the interface between the internal environment and the external atmosphere makes these cells a first line of defense against air-borne irritants, allergens, and pathogens. Their robust, intrinsic reparative properties facilitate effective recovery from such adversities. However, damage to respiratory basal cells or abnormalities in their function are associated with several respiratory pathologies such as asthma, chronic obstructive pulmonary disease, and lung cancer. Therefore, understanding these cells' function, and their role in disease, is crucial for the development of new therapeutic strategies for respiratory disorders.") +AnnotationAssertion( "https://cellxgene.cziscience.com/cellguide/CL_0002633") +AnnotationAssertion(rdfs:label "respiratory basal cell") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (epithelial cell of anal column) + +AnnotationAssertion(Annotation( "GOC:tfm") "An epithelial cell of the anal column.") +AnnotationAssertion(rdfs:label "epithelial cell of anal column") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (keratinized epithelial cell of the anal canal) + +AnnotationAssertion(Annotation( "GOC:tfm") "An epithelial cell of the anal canal that is keratinized. This cell type is found towards the lower, rectal end of the anal canal.") +AnnotationAssertion(rdfs:label "keratinized epithelial cell of the anal canal") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) + # Class: (squamous endothelial cell) AnnotationAssertion(Annotation( "GOC:dos") "A squamous shaped endothelial cell.") @@ -10743,12 +13097,12 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) -# Class: (glandular cell of stomach) +# Class: (glandular epithelial cell of stomach) AnnotationAssertion(Annotation( "GOC:tfm") "A glandular epithelial cell that is part of the stomach.") AnnotationAssertion( "CALOHA:TS-1284") AnnotationAssertion( "FMA:86554") -AnnotationAssertion(rdfs:label "glandular cell of stomach") +AnnotationAssertion(rdfs:label "glandular epithelial cell of stomach") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) @@ -10802,15 +13156,45 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (ionocyte) + +AnnotationAssertion(Annotation( "PMID:17555741") Annotation( "PMID:19268451") "Specialized epithelial cells involved in the maintenance of osmotic homeostasis. They are characterized by abundant mitochondria and ion transporters. In amniotes, they are present in the renal system. In freshwater fish, ionocytes in the skin and gills help maintain osmotic homeostasis by absorbing salt from the external environment.") +AnnotationAssertion( ) +AnnotationAssertion(Annotation( "DOI:10.1016/j.jcf.2019.09.010") Annotation( "DOI:10.1038/s41586-018-0393-7") Annotation( "DOI:10.1038/s41598-023-30603-1") Annotation( "DOI:10.1146/annurev-pathol-042420-094031") Annotation( "DOI:10.3389/fmars.2020.00709") "This extended description was generated by ChatGPT and reviewed by the CellGuide team, who added references, and by the CL editors, who approved it for inclusion in CL. It may contain information that applies to only to some subtypes and species, and so should not be considered definitional. + +Ionocytes are specialized cells predominantly found in the mammalian respiratory and renal systems as well as in the gills, skin, and intestinal tract of fish. These cells play crucial roles in maintaining ion and acid-base homeostasis. Ionocytes demonstrate remarkable plasticity and are able to adapt themselves in response to changes in environmental conditions such as pH, salinity, ion concentration, and temperature. +These cells work by selectively absorbing specific ions from the environment, thus maintaining the body's internal ionic balance. The most commonly absorbed ions include sodium (Na+), chloride (Cl-), calcium (Ca2+), and hydrogen (H+). Moreover, ionocytes contribute to acid-base regulation. In response to acidosis or alkalosis, ionocytes can either excrete or retain hydrogen (H+) and bicarbonate (HCO3-) ions to readjust the blood pH. Further, experimental evidence suggests a functional complexity of ionocytes, implying diverse roles beyond ion regulation. Recent research highlights ionocytes' involvement in ammonia excretion and the regulation of extracellular fluid volume, highlighting their contribution to the overall homeostatic process. +Malfunctioning ionocytes have been implicated in various diseases, including cystic fibrosis which is caused by mutations in the chloride channel CFTR, an ionocyte marker.") +AnnotationAssertion( "https://cellxgene.cziscience.com/cellguide/CL_0005006") +AnnotationAssertion(rdfs:label "ionocyte") +SubClassOf( ) + # Class: (multi-ciliated epithelial cell) -AnnotationAssertion(Annotation( "CL:CVS") "A ciliated epithelial cell with many cilia.") +AnnotationAssertion(Annotation( "CL:CVS") Annotation( "PMID:28400610") Annotation( "PMID:30422572") Annotation( "PMID:38032388") "A columnar/cuboidal epithelial cell with multiple motile cilia on its apical surface. These cells facilitate the movement of liquids such as mucus or cerebrospinal fluid across the epithelial surface.") +AnnotationAssertion(Annotation( "DOI:10.1016/j.cub.2014.08.047") Annotation( "DOI:10.1038/nrm.2017.21") Annotation( "DOI:10.1101/cshperspect.a028233") "This extended description was generated by ChatGPT and reviewed by the CellGuide team, who added references, and by the CL editors, who approved it for inclusion in CL. It may contain information that applies to only to some subtypes and species, and so should not be considered definitional. + +The multi-ciliated epithelial cell are terminally differentiated epithelia that line brain ventricles, the respiratory tract and parts of the female and male reproductive organs in animals, playing critical roles in the maintenance of homeostasis through ciliary motion. They are characterized by the presence of hundreds of motile cilia, hair-like microtubule-based organelles that beat in a coordinated fashion to direct fluid flow over the cell surface. +Multi-ciliated epithelial cells have fundamental roles in the proper functioning of many organ systems. In the respiratory system, they line the airways and orchestrate the coordinated movement of mucus, effectively clearing the airways of inhaled particles and pathogens. These cells are also vital in the ventricular system of the brain where they facilitate cerebrospinal fluid circulation, thus contributing to the maintenance of the brain's microenvironment. In the fallopian tube, multi-ciliated epithelial cells aid in the transport of oocytes from the ovary to the uterus, a process crucial to reproduction. +The formation and function of multi-ciliated epithelial cells is a highly regulated process that involves several stages of development including cell specification, centriole multiplication, and ciliogenesis. Any disruption in these processes can result in dysfunctional or decreased numbers of cilia, which can lead to a myriad of health issues, ranging from chronic respiratory infections to infertility.") +AnnotationAssertion( "https://cellxgene.cziscience.com/cellguide/CL_0005012") +AnnotationAssertion(Annotation( "PMID:22118931") Annotation( "PMID:23959957") Annotation( "PMID:25729351") Annotation( "PMID:26378583") rdfs:comment "While the term 'multi-ciliated epithelial cell' refers to cells with multiple motile cilia, there are exceptions where epithelial cells may have multiple non-motile cilia. Examples include olfactory sensory neurons, which have non-motile cilia for sensory detection, and choroid plexus epithelial cells, which possess multiple non-motile cilia with transient motility during development. Multiciliated cells are essential for human health, and their dysfunction can lead to various diseases known as ciliopathies, such as primary ciliary dyskinesia. This condition affects the respiratory system, brain ventricles, and reproductive system, leading to chronic respiratory infections, hydrocephalus, and infertility") AnnotationAssertion(rdfs:label "multi-ciliated epithelial cell") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (hepatoblast) AnnotationAssertion(Annotation( "GOC:CVS") Annotation( "PMID:18356246") Annotation( "PMID:20483998") Annotation( "PMID:26798363") Annotation( "https://orcid.org/0000-0003-1940-6740") "Multi fate stem cell that gives rise to both hepatocytes and cholangiocytes as descendants. The term often refers to fetal precursors of hepatocytes (differently from 'hepatic stem cell', usually applied to the self-renewing pool of hepatocyte precursors in the adult liver). Hepatoblasts may also be endogenous, as some stem cells found in the liver come from the bone marrow via blood circulation.") +AnnotationAssertion(Annotation( "DOI:10.1016/j.stem.2014.04.010") Annotation( "DOI:10.1093/jb/mvr001") Annotation( "DOI:10.1242/dev.031369") Annotation( "DOI:10.1242/dev.114215") Annotation( "DOI:10.5966/sctm.2015-0051") "This extended description was generated by ChatGPT and reviewed by the CellGuide team, who added references, and by the CL editors, who approved it for inclusion in CL. It may contain information that applies to only to some subtypes and species, and so should not be considered definitional. + +Hepatoblasts are immature precursor cells that predominate during the early stages of liver development, specifically in the embryonic phase of life. They first arise from the endoderm, one of the three primary germ layers in the very early embryo, and then differentiate into two distinct mature liver cell types - the hepatocytes and cholangiocytes. +During liver organogenesis hepatoblasts proliferate and migrate into the septum transversum to form the liver bud. Proliferation and differentiation of these cells are regulated by several soluble factors, such as hepatocyte growth factor, which is a mitogen of both hepatoblasts and mature hepatocytes. As they start to differentiate into hepatocytes and cholangiocytes, the cells begin to express hepatic markers like albumin and alpha-fetoprotein. +Although hepatoblasts are specified embryonic liver cells that are bipotential for hepatocytes and cholangiocytes, a subset of liver cells (called oval cells) has been identified in adults that express stem cell markers, such as CD133 and cKIT, and has been suggested to have the same potential as hepatoblasts to differentiate into hepatocytes and cholangiocytes.") +AnnotationAssertion( "https://cellxgene.cziscience.com/cellguide/CL_0005026") AnnotationAssertion(rdfs:label "hepatoblast"@en) SubClassOf( ) @@ -10894,8 +13278,10 @@ SubClassOf( (mesenchymal cell) AnnotationAssertion( "A non-polarised cell precursor cell that is part of some mesenchyme, is associated with the cell matrix but is not connected to other cells and is capable of migration.") +AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mesenchymal cell") SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -10911,11 +13297,21 @@ SubClassOf( ObjectSomeValuesFrom( (pancreatic endocrine cell) AnnotationAssertion(Annotation( "GOC:dos") "An endocrine cell that is part of the pancreas.") +AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pancreatic endocrine cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) +# Class: (noradrenergic neuron) + +AnnotationAssertion(Annotation( "GOC:dos") "A neuron that release noradrenaline (noriphinephrine) as a neurotransmitter.") +AnnotationAssertion(rdfs:label "noradrenergic neuron") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (visual system neuron) AnnotationAssertion(Annotation( "FBC:Autogenerated") "Any neuron that is capable of part of some visual perception.") @@ -10924,9 +13320,18 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (cortical interneuron) + +AnnotationAssertion( "An interneuron that has its soma located in the cerebral cortex.") +AnnotationAssertion(rdfs:label "cortical interneuron"@en) +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) + # Class: (mural cell) AnnotationAssertion(Annotation( "Wiki:Mural_cell&oldid=930603194") "Mural cells are pericytes and the vascular smooth muscle cells (vSMCs) of the microcirculation.") +AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mural cell"@en) SubClassOf( ) @@ -10977,6 +13382,7 @@ SubClassOf( (lymphocyte of large intestine lamina propria) AnnotationAssertion(Annotation( "https://orcid.org/0000-0003-4183-8865") "A lymphocyte that resides in the lamina propria of the large intestine.") +AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "This is a general grouping term created for use in the EMBL-EBI Single Cell Expression Atlas anatomograms. Please use a more specific cell type term for annotation if possible, given the information available to you.") AnnotationAssertion(rdfs:label "lymphocyte of large intestine lamina propria") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) @@ -11024,6 +13430,14 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (colon goblet cell) + +AnnotationAssertion(Annotation( "http://orcid.org/0000-0003-3440-1876") "A goblet cell that is located in the colon.") +AnnotationAssertion(rdfs:label "colon goblet cell") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) + # Class: (stromal cell of lamina propria of colon) AnnotationAssertion(Annotation( "http://orcid.org/0000-0003-3440-1876") "A stromal cell found in the lamina propria of the colon.") @@ -11032,6 +13446,14 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (tuft cell of colon) + +AnnotationAssertion(Annotation( "http://orcid.org/0000-0003-3440-1876") "A tuft cell that is a part of the colon.") +AnnotationAssertion(rdfs:label "tuft cell of colon") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) + # Class: (enteroendocrine cell of colon) AnnotationAssertion(Annotation( "http://orcid.org/0000-0003-3440-1876") "An enteroendocrine cell that is located in the colon.") @@ -11083,6 +13505,14 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (anorectum goblet cell) + +AnnotationAssertion(Annotation( "http://orcid.org/0000-0003-3440-1876") "A goblet cell that is located in the anorectum.") +AnnotationAssertion(rdfs:label "anorectum goblet cell") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (enteroendocrine cell of anorectum) AnnotationAssertion(Annotation( "http://orcid.org/0000-0003-3440-1876") "An enteroendocrine cell that is located in the anorectum.") @@ -11092,9 +13522,37 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (tuft cell of anorectum) + +AnnotationAssertion(Annotation( "http://orcid.org/0000-0003-3440-1876") "An intestinal tuft cell that is located in the anorectum.") +AnnotationAssertion(rdfs:label "tuft cell of anorectum") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (stratified squamous epithelial cell of anal canal) + +AnnotationAssertion(Annotation( "http://orcid.org/0000-0003-3440-1876") "A stratified squamous epithelial cell that is part of the anal canal.") +AnnotationAssertion(rdfs:comment "This is a general grouping term created for use in the EMBL-EBI Single Cell Expression Atlas anatomograms. Please use a more specific cell type term for annotation if possible, given the information available to you.") +AnnotationAssertion(rdfs:label "stratified squamous epithelial cell of anal canal") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (tuft cell of small intestine) + +AnnotationAssertion(Annotation( "http://orcid.org/0000-0003-3440-1876") Annotation( "http://orcid.org/0000-0003-4183-8865") "A tuft cell located in the small intestine.") +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "tuft cell of small intestine") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) + # Class: (lung pericyte) AnnotationAssertion(Annotation( "https://orcid.org/0000-0003-3440-1876") Annotation( "https://orcid.org/0000-0003-4183-8865") "A pericyte cell that is part of a lung.") +AnnotationAssertion( ) AnnotationAssertion( "EFO:0010669") AnnotationAssertion(rdfs:label "lung pericyte") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) @@ -11121,6 +13579,7 @@ SubClassOf( ObjectSomeValuesFrom( (hepatic portal fibroblast) AnnotationAssertion(Annotation( "PMID:20209607") Annotation( "PMID:24814904") Annotation( "https://orcid.org/0000-0001-7655-4833") "A fibroblast located in the portal triad. Hepatic portal fibroblast are a non-parenchymal cell population located adjacent to bile duct epithelia in liver and are distinct from stellate cells. They differentiate into fibrogenic myofibroblasts during chronic injury states producing high levels of collagen.") +AnnotationAssertion( ) AnnotationAssertion(rdfs:label "hepatic portal fibroblast") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) @@ -11134,16 +13593,6 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) -# Class: (epithelial cell of alveolus of lung) - -AnnotationAssertion( "An epithelial cell that is part_of a alveolus of lung.") -AnnotationAssertion( "MESH:D056809") -AnnotationAssertion(rdfs:comment "May be merged with pneumocyte in future") -AnnotationAssertion(rdfs:label "epithelial cell of alveolus of lung") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (mononuclear cell of bone marrow) AnnotationAssertion( "A mononuclear cell that is part_of a bone marrow.") @@ -11171,6 +13620,7 @@ SubClassOf( ObjectSomeValuesFrom( (cardiac endothelial cell) AnnotationAssertion(Annotation( "FBC:Autogenerated") "Any endothelial cell that is part of some heart.") +AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cardiac endothelial cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) @@ -11187,6 +13637,25 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (cerebral cortex GABAergic interneuron) + +AnnotationAssertion(Annotation( "GOC:dos") "A GABAergic interneuron whose soma is located in the cerebral cortex.") +AnnotationAssertion(rdfs:label "cerebral cortex GABAergic interneuron") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) + +# Class: (cerebral cortex neuron) + +AnnotationAssertion(Annotation( "GOC:tfm") "A CNS neuron of the cerebral cortex.") +AnnotationAssertion( ) +AnnotationAssertion( "BTO:0004102") +AnnotationAssertion( "FMA:84104") +AnnotationAssertion(rdfs:label "cerebral cortex neuron") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (zygote) AnnotationAssertion( "A zygote in a plant or an animal.") @@ -11230,6 +13699,16 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (GABAergic interneuron) + +AnnotationAssertion(Annotation( "GOC:CellBLAST") Annotation( "GOC:nv") Annotation( "PMID:29724907") "An interneuron that uses GABA as a vesicular neurotransmitter. These interneurons are inhibitory") +AnnotationAssertion( ) +AnnotationAssertion(rdfs:comment "The formal and textual definitions of this term will need to be altered if evidence for non-inhibitory GABA-ergic neurons emerges.") +AnnotationAssertion(rdfs:label "GABAergic interneuron") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) + # Class: (paraxial cell) AnnotationAssertion(Annotation( "GOC:NV") Annotation( "PMID:11687492") "A cell in the area of mesoderm in the neurulating embryo that flanks and forms simultaneously with the neural tube. The cells of this region give rise to somites.") @@ -11241,6 +13720,12 @@ SubClassOf( ObjectSomeValuesFrom( (neural crest cell) AnnotationAssertion(Annotation( "https://orcid.org/0000-0001-5208-3432") Annotation( "https://orcid.org/0000-0002-9900-7880") "A cell of the neural crest. Neural crest cells are multipotent. Premigratory neural crest cells are found at the neural plate boarder, some of which will undergo ectomesynchymal transition and delamination to form migratory neural crest cells.") +AnnotationAssertion(Annotation( "DOI:10.1002/dvg.23276") Annotation( "DOI:10.1242/dev.193193") Annotation( "DOI:10.3389/fcell.2020.00635/full") Annotation( "https://doi.org/10.1016/j.ydbio.2011.12.042") "This extended description was generated by ChatGPT and reviewed by the CellGuide team, who added references, and by the CL editors, who approved it for inclusion in CL. It may contain information that applies to only to some subtypes and species, and so should not be considered definitional. + +Neural crest cells are a group of transient and highly migratory cells that originate from the neuroectoderm during the early stages of embryonic development. They are multipotent cells with an exceptional degree of plasticity, capable of differentiating into various somatic cell types and therefore play a fundamental role in the formation of various organs and tissues, making them critical contributors to the developing embryo. +After the initiation of neurulation (the formation of the neural tube) neural crest cells start to undergo epithelial-to-mesenchymal transition and delaminate and migrate from the dorsal neural tube to several regions throughout the embryo. They differentiate into a range of diverse cell types, such as neurons and glial cells of the peripheral nervous system, including sensory and autonomic neurons. They also contribute to the formation of adrenal glands, pigment cells in the skin (melanocytes), cardiac structures, including parts of the heart septum and major arteries, as well as bones and cartilage of the face and skull. +Disorders or aberrations in the development or migration of the neural crest cells can lead to serious congenital malformations, such as neurocristopathies, including Hirschsprung disease, neuroblastoma, and neurofibromatosis.") +AnnotationAssertion( "https://cellxgene.cziscience.com/cellguide/CL_0011012") AnnotationAssertion(rdfs:label "neural crest cell") SubClassOf( ) SubClassOf( ) @@ -11276,6 +13761,7 @@ AnnotationAssertion(Annotation( "progenitor cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -11312,6 +13798,31 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (neuron of the forebrain) + +AnnotationAssertion( "A CNS neuron of the forebrain.") +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "neuron of the forebrain") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (pulmonary ionocyte) + +AnnotationAssertion(Annotation( "PMID:30069044") Annotation( "PMID:30069046") "An ionocyte that is part of the lung epithelium. The cells from this type are major sources of the CFTR protein in human and mice.") +AnnotationAssertion( ) +AnnotationAssertion(Annotation( "DOI:10.1038/s41586-018-0393-7") Annotation( "DOI:10.1146/annurev-pathol-042420-094031") Annotation( "DOI:10.1172/JCI171268") "This extended description was generated by ChatGPT and reviewed by the CellGuide team, who added references, and by the CL editors, who approved it for inclusion in CL. It may contain information that applies to only to some subtypes and species, and so should not be considered definitional. + +The pulmonary ionocyte is a relatively newly identified, specific epithelial cell type found primarily in the pulmonary or respiratory system. Discovered through novel mapping techniques in 2018, these cells are surprisingly rare, making up less than 2% of the cells in the lung's airway, yet they play an essential role in the airway surface liquid and mucus regulation, a crucial factor in lung health. +The main responsibility of the pulmonary ionocyte pertains to the regulation and mobilization of chloride ions. They express a high level of CFTR (Cystic Fibrosis Transmembrane Conductance Regulator) gene, which encodes a protein channel across the membrane of cells that produce mucus, sweat, saliva, tears, and digestive enzymes. The activity of CFTR regulates the movement of chloride ions and fluids in and out of cells, which helps maintain a balance of fluid in the organs they are expressed in. If CFTR is dysfunctional, it can cause conditions such as cystic fibrosis, characterized by thick, sticky mucus that can clog the lungs and obstruct the pancreas, leading to respiratory and digestive issues. +The discovery of this cell type offers new doors to the treatment and further understanding of diseases like cystic fibrosis. Increased understanding of pulmonary ionocytes could contribute to the development of novel therapeutic approaches to manipulate the function of CFTR in the lungs and other organs affected by dysfunctional CFTR.") +AnnotationAssertion( "https://cellxgene.cziscience.com/cellguide/CL_0017000") +AnnotationAssertion(rdfs:label "pulmonary ionocyte") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) + # Class: (neutrophillic cytoplasm) AnnotationAssertion(Annotation( "GOC:add") "Cytoplasm that exhibits a characteristic staining and color, pale-pink, with Wright-Giemsa stain.") @@ -11349,20 +13860,32 @@ SubClassOf( ObjectSomeValuesFrom( "Any serous secreting cell that is part of the tracheobronchial epithelium.") AnnotationAssertion(rdfs:label "tracheobronchial serous cell"@en) EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (tracheobronchial chondrocyte) AnnotationAssertion( "Any chondrocyte that is part of the tracheobronchial tree.") +AnnotationAssertion( ) AnnotationAssertion(rdfs:label "tracheobronchial chondrocyte"@en) EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (tracheobronchial goblet cell) + +AnnotationAssertion( "Any goblet cell that is part of the tracheobronchial epithelium.") +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "tracheobronchial goblet cell"@en) +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) + # Class: (blood vessel smooth muscle cell) AnnotationAssertion(Annotation( "PMID:9108778") "A smooth muscle cell that is part of any blood vessel.") +AnnotationAssertion( ) AnnotationAssertion(rdfs:label "blood vessel smooth muscle cell"@en) EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) @@ -11371,6 +13894,7 @@ SubClassOf( ObjectSomeValuesFrom( (tracheobronchial smooth muscle cell) AnnotationAssertion(Annotation( "PMID:10853867") "A smooth muscle cell that is part of the tracheobronchial tree.") +AnnotationAssertion( ) AnnotationAssertion(rdfs:label "tracheobronchial smooth muscle cell"@en) EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) @@ -11402,6 +13926,46 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (intestine goblet cell) + +AnnotationAssertion(Annotation( "PMID:1996606") Annotation( "PMID:24942678") "Goblet cells reside throughout the length of the small and large intestine and are responsible for the production and maintenance of the protective mucus blanket by synthesizing and secreting high-molecular-weight glycoproteins known as mucins. Human intestinal goblet cells secrete the MUC2 mucin, as well as a number of typical mucus components: CLCA1, FCGBP, AGR2, ZG16, and TFF3.") +AnnotationAssertion(rdfs:label "intestine goblet cell"@en) +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) + +# Class: (intestinal tuft cell) + +AnnotationAssertion(Annotation( "PMID:22527717") "Any brush cell that is part of the intestinal epithelium.") +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "intestinal tuft cell"@en) +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) + +# Class: (forebrain neuroblast) + +AnnotationAssertion(Annotation( "FBC:Autogenerated") "Any neuroblast (sensu Vertebrata) that is part of some forebrain.") +AnnotationAssertion(rdfs:label "forebrain neuroblast") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (lung goblet cell) + +AnnotationAssertion(Annotation( "FBC:Autogenerated") "Any goblet cell that is part of some lung epithelium.") +AnnotationAssertion(Annotation( "DOI:10.1038/s41385-018-0039-y") Annotation( "DOI:10.1038/s41385-020-00370-7") Annotation( "DOI:10.1159/000512268") Annotation( "DOI:10.1513/AnnalsATS.201802-128AW") Annotation( "https://www.ncbi.nlm.nih.gov/books/NBK553208/") "This extended description was generated by ChatGPT and reviewed by the CellGuide team, who added references, and by the CL editors, who approved it for inclusion in CL. It may contain information that applies to only to some subtypes and species, and so should not be considered definitional. + +Lung goblet cells are critical components of the respiratory tract, specifically found in the bronchial segments. They are secretory epithelial cells known for their signature \"goblet\" or cup-like shape. Their primary function is to produce and secrete mucus that aids in trapping airborne particles and pathogens, preventing them from reaching the delicate environment of the lung. As part of the lung's epithelial lining, they act as frontline defenders, maintaining lung health and function. +The lung goblet cells are densely packed with granules containing mucin glycoproteins, the primary component of mucus. As mucus is produced and secreted, it moves towards the lumen of the lungs where the cilia, hair-like structures of the neighboring ciliated epithelial cells, help to navigate it upwards and out of the respiratory tract. This coordinated action ensures the expulsion of unwanted particles and pathogens, effectively cleaning the respiratory tract. +Dysfunction or abnormal proliferation of lung goblet cells can result in pathological conditions such as chronic obstructive pulmonary disorder (COPD) and asthma, where excessive mucus production leads to airway obstruction. Furthermore, lung goblet cells respond to a variety of stimuli, including toxins, allergens, irritants, and infections, adjusting their mucus production accordingly.") +AnnotationAssertion( "https://cellxgene.cziscience.com/cellguide/CL_1000143") +AnnotationAssertion(rdfs:label "lung goblet cell") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) + # Class: (stomach neuroendocrine cell) AnnotationAssertion(Annotation( "FBC:Autogenerated") "Any neuroendocrine cell that is part of some stomach.") @@ -11414,6 +13978,12 @@ SubClassOf( (lung neuroendocrine cell) AnnotationAssertion(Annotation( "PMID:33355253") Annotation( "doi:10.3109/01902148209069653") Annotation( "doi:10.7554/eLife.78216") "A neuroendocrine cell that is part of respiratory epithelium of the lung and is involved in the sensory detection of environmental stimuli, including hypoxia, nicotine and air pressure. Ultrastructurally, this cell type is characterized by the presence of cytoplasmic dense core granules, which are considered the storage sites of amine and peptide hormones. Lung neuroendocrine cells are innervated and appear as solitary cells or as clustered masses, localized at airway bifurcation sites, called neuroepithelial bodies that can release serotonin in response to hypoxia and interact with sensory nerve terminals. Lung neuroendocrine cells also function as reserve stem cells that repair the surrounding epithelium after injury.") +AnnotationAssertion( ) +AnnotationAssertion(Annotation( "DOI:10.1016/bs.ctdb.2018.12.002") Annotation( "DOI:10.1016/j.devcel.2020.09.024") Annotation( "DOI:10.1242/dmm.046920") "This extended description was generated by ChatGPT and reviewed by the CellGuide team, who added references, and by the CL editors, who approved it for inclusion in CL. It may contain information that applies to only to some subtypes and species, and so should not be considered definitional. + +Lung neuroendocrine cells, also commonly known as pulmonary neuroendocrine cells (PNECs), are predominantly located in the respiratory epithelium of the bronchial and bronchiolar airways in the lungs. These cells, characterised by their small size and granular appearance, have a distinctive morphology that sets them apart from other lung cells. They are considered part of the diffuse neuroendocrine system due to their scattered distribution through the epithelium and have been classified into solitary cells and clustered forms known as neuroepithelial bodies. +The primary function of PNECs is linked to regulation and maintenance of the lung environment. They are sensory in nature and can secrete various bioactive substances such as serotonin, calcitonin, calcitonin gene-related peptides, and bombesin-like peptides which modulate airway smooth muscle tone and influence gut motility. For example, they act as oxygen sensors in response to hypoxia and are responsible for releasing neuropeptides that can induce responses. Moreover, PNECs provide an afferent function as they are equipped with long microvilli that project into the lumen of the bronchus and react to changes in the chemical composition of the luminal content.") +AnnotationAssertion( "https://cellxgene.cziscience.com/cellguide/CL_1000223") AnnotationAssertion(rdfs:label "lung neuroendocrine cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) @@ -11427,11 +13997,13 @@ SubClassOf( ObjectSomeValuesFrom( (lung ciliated cell) -AnnotationAssertion(Annotation( "FBC:Autogenerated") "Any ciliated cell that is part of some lung.") +AnnotationAssertion(Annotation( "PMID:27864314") "An epithelial cell that is part of the lung epithelium. This cell is characterised by the presence of cilia on its apical surface.") +AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lung ciliated cell") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (lung secretory cell) @@ -11439,6 +14011,7 @@ AnnotationAssertion(Annotation( "lung secretory cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (trophectodermal cell) @@ -11467,6 +14040,7 @@ SubClassOf( ObjectSomeValuesFrom( (smooth muscle cell of large intestine) AnnotationAssertion(Annotation( "GOC:tfm") "A smooth muscle cell that is part of the large intestine.") +AnnotationAssertion( ) AnnotationAssertion( "FMA:15653") AnnotationAssertion(rdfs:label "smooth muscle cell of large intestine") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) @@ -11532,6 +14106,7 @@ SubClassOf( ObjectSomeValuesFrom( (epicardial adipocyte) AnnotationAssertion(Annotation( "GOC:tfm") "An adipocyte that is part of the epicardial fat.") +AnnotationAssertion( ) AnnotationAssertion( "FMA:261293") AnnotationAssertion(rdfs:label "epicardial adipocyte") SubClassOf( ) @@ -11556,9 +14131,91 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (bronchial goblet cell) + +AnnotationAssertion(Annotation( "GOC:tfm") "A goblet cell that is part of the epithelium of bronchus.") +AnnotationAssertion( "FMA:263032") +AnnotationAssertion(rdfs:label "bronchial goblet cell") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) + +# Class: (gastric goblet cell) + +AnnotationAssertion(Annotation( "GOC:tfm") "A goblet cell that is part of the epithelium of stomach.") +AnnotationAssertion( "FMA:263035") +AnnotationAssertion(rdfs:label "gastric goblet cell") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (intestinal villus goblet cell) + +AnnotationAssertion(Annotation( "GOC:tfm") "A goblet cell that is part of the epithelium of intestinal villus.") +AnnotationAssertion( "FMA:263046") +AnnotationAssertion(rdfs:label "intestinal villus goblet cell") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (large intestine goblet cell) + +AnnotationAssertion(Annotation( "GOC:tfm") "A goblet cell that is part of the epithelium of large intestine.") +AnnotationAssertion( "FMA:263054") +AnnotationAssertion(rdfs:label "large intestine goblet cell") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (pancreatic goblet cell) + +AnnotationAssertion(Annotation( "GOC:tfm") "A goblet cell that is part of the epithelium of pancreatic duct.") +AnnotationAssertion( ) +AnnotationAssertion( "FMA:263058") +AnnotationAssertion(rdfs:label "pancreatic goblet cell") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (pyloric gastric gland goblet cell) + +AnnotationAssertion(Annotation( "GOC:tfm") "A goblet cell that is part of the epithelium of pyloric gland.") +AnnotationAssertion( "FMA:263061") +AnnotationAssertion(rdfs:label "pyloric gastric gland goblet cell") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( ObjectIntersectionOf( ObjectSomeValuesFrom( )))) + +# Class: (duodenal goblet cell) + +AnnotationAssertion(Annotation( "GOC:tfm") "A goblet cell that is part of the epithelium proper of duodenum.") +AnnotationAssertion( ) +AnnotationAssertion( "FMA:263063") +AnnotationAssertion(rdfs:label "duodenal goblet cell") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (tracheal goblet cell) + +AnnotationAssertion(Annotation( "GOC:tfm") "A goblet cell that is part of the epithelium of trachea.") +AnnotationAssertion( ) +AnnotationAssertion( "FMA:263075") +AnnotationAssertion(rdfs:label "tracheal goblet cell") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (serous cell of epithelium of trachea) AnnotationAssertion(Annotation( "GOC:tfm") "A serous secreting cell that is part of the epithelium of trachea.") +AnnotationAssertion( ) AnnotationAssertion( "FMA:263078") AnnotationAssertion(rdfs:label "serous cell of epithelium of trachea") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) @@ -11568,6 +14225,7 @@ SubClassOf( ObjectSomeValuesFrom( (serous cell of epithelium of bronchus) AnnotationAssertion(Annotation( "GOC:tfm") "A serous secreting cell that is part of the epithelium of bronchus.") +AnnotationAssertion( ) AnnotationAssertion( "FMA:263080") AnnotationAssertion(rdfs:label "serous cell of epithelium of bronchus") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) @@ -11584,6 +14242,47 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (basal cell of epithelium of trachea) + +AnnotationAssertion(Annotation( "GOC:tfm") "A basal cell that is part of the epithelium of trachea.") +AnnotationAssertion( ) +AnnotationAssertion( "FMA:263118") +AnnotationAssertion(rdfs:label "basal cell of epithelium of trachea") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (basal cell of epithelium of bronchus) + +AnnotationAssertion(Annotation( "GOC:tfm") "A basal cell found in the bronchus epithelium.") +AnnotationAssertion( ) +AnnotationAssertion( "FMA:263120") +AnnotationAssertion(rdfs:label "basal cell of epithelium of bronchus") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) + +# Class: (basal cell of epithelium of terminal bronchiole) + +AnnotationAssertion(Annotation( "GOC:tfm") "A basal cell that is part of the epithelium of terminal bronchiole.") +AnnotationAssertion( ) +AnnotationAssertion( "FMA:263122") +AnnotationAssertion(rdfs:label "basal cell of epithelium of terminal bronchiole") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (basal cell of epithelium of respiratory bronchiole) + +AnnotationAssertion(Annotation( "GOC:tfm") "A basal cell that is part of the epithelium of respiratory bronchiole.") +AnnotationAssertion( ) +AnnotationAssertion( "FMA:263124") +AnnotationAssertion(rdfs:label "basal cell of epithelium of respiratory bronchiole") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (transitional myocyte of interatrial septum) AnnotationAssertion(Annotation( "GOC:tfm") "A transitional myocyte that is part of the interatrial septum.") @@ -11617,6 +14316,7 @@ SubClassOf( ObjectSomeValuesFrom( (endothelial cell of hepatic sinusoid) AnnotationAssertion(Annotation( "GOC:tfm") Annotation( "PMID:3926620") "An endothelial cell that is part of the hepatic sinusoid. These cells possess flattened areas containing perforations about 0.1 micrometers in diameter, known as fenestrae. The fenestrae are arranged in groups known as sieve plates.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:000125") AnnotationAssertion( "FMA:62911") AnnotationAssertion(rdfs:label "endothelial cell of hepatic sinusoid") @@ -11649,6 +14349,7 @@ SubClassOf( ObjectSomeValuesFrom( (endothelial cell of arteriole) AnnotationAssertion(Annotation( "GOC:tfm") "An endothelial cell that is part of the arteriole.") +AnnotationAssertion( ) AnnotationAssertion( "FMA:67760") AnnotationAssertion( "KUPO:0001097") AnnotationAssertion(rdfs:label "endothelial cell of arteriole") @@ -11659,9 +14360,16 @@ SubClassOf( ObjectSomeValuesFrom( (endothelial cell of artery) AnnotationAssertion(Annotation( "GOC:tfm") "A blood vessel endothelial cell that is part of an arterial endothelium.") +AnnotationAssertion( ) +AnnotationAssertion(Annotation( "DOI:10.1007/s00441-008-0706-5") Annotation( "DOI:10.1007/s10456-021-09785-7") Annotation( "DOI:10.1016/j.ccm.2021.08.005") Annotation( "DOI:10.1016/j.jvs.2004.03.043") Annotation( "DOI:10.1177/153857440303700107") "This extended description was generated by ChatGPT and reviewed by the CellGuide team, who added references, and by the CL editors, who approved it for inclusion in CL. It may contain information that applies to only to some subtypes and species, and so should not be considered definitional. + +Endothelial cells of the artery, also referred to as arterial endothelial cells, form an integral part of the arterial system. They form a single layer, known as the endothelium, lining the interior surface of arteries, and are able to respond to the high-pressure and flow conditions present in arteries. The primary role of these cells is to provide a barrier between the vessel wall and the blood, exhibiting selective permeability to regulate the movement of liquids, gases, and blood-borne substances across the vascular wall. +Arterial endothelial cells significantly contribute to maintaining vascular homeostasis. They are at the forefront of sensations and responses to mechanical stimuli, like shear stress and blood pressure changes. An additional key function pertains to the production of nitric oxide, which helps to regulate vascular tone and blood pressure, prevents platelet aggregation, limits leukocyte adhesion to the endothelium, and inhibits smooth muscle cell proliferation. These varied but connected functions help to preclude the development of atherosclerosis, ensuring normal circulation and arterial health. +Moreover, these cells play a pivotal role in inflammation and coagulation processes. During inflammatory events, they express various adhesion molecules, aiding in leukocyte recruitment and rolling onto the vessel walls for immune response. They also produce anticoagulant and procoagulant substances, involved in blood clotting and clot dissolution, respectively. Dysregulation of the usual functions of arterial endothelial cells can result in serious pathophysiological conditions, such as atherosclerosis, hypertension, and other cardiovascular diseases.") AnnotationAssertion( "BTO:0004758") AnnotationAssertion( "FMA:67761") AnnotationAssertion( "KUPO:0001095") +AnnotationAssertion( "https://cellxgene.cziscience.com/cellguide/CL_1000413") AnnotationAssertion(rdfs:label "endothelial cell of artery") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) @@ -11670,6 +14378,7 @@ SubClassOf( ObjectSomeValuesFrom( (endothelial cell of venule) AnnotationAssertion(Annotation( "GOC:tfm") "An endothelial cell that is part of the venule.") +AnnotationAssertion( ) AnnotationAssertion( "FMA:67762") AnnotationAssertion(rdfs:label "endothelial cell of venule") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) @@ -11712,6 +14421,15 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (epithelial cell of stratum germinativum of esophagus) + +AnnotationAssertion(Annotation( "GOC:tfm") "A basal cell that is part of the epithelium of esophagus.") +AnnotationAssertion( "FMA:70731") +AnnotationAssertion(rdfs:label "epithelial cell of stratum germinativum of esophagus") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (mesothelial cell of parietal peritoneum) AnnotationAssertion(Annotation( "GOC:tfm") "A mesothelial cell that is part of the parietal peritoneum.") @@ -11724,12 +14442,24 @@ SubClassOf( ObjectSomeValuesFrom( (mesothelial cell of visceral peritoneum) AnnotationAssertion(Annotation( "GOC:tfm") "A mesothelial cell that is part of the visceral peritoneum.") +AnnotationAssertion( ) AnnotationAssertion( "FMA:72143") AnnotationAssertion(rdfs:label "mesothelial cell of visceral peritoneum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (melanocyte of skin) + +AnnotationAssertion(Annotation( "GOC:tfm") "A melanocyte that is part of the skin of body.") +AnnotationAssertion( ) +AnnotationAssertion( "CALOHA:TS-2374") +AnnotationAssertion( "FMA:72144") +AnnotationAssertion(rdfs:label "melanocyte of skin") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (transitional myocyte of sinoatrial node) AnnotationAssertion(Annotation( "GOC:tfm") "A transitional myocyte that is part of the sinoatrial node.") @@ -11761,7 +14491,13 @@ SubClassOf( ObjectSomeValuesFrom( (cholangiocyte) AnnotationAssertion(Annotation( "GOC:tfm") Annotation( "PMID:16550043") Annotation( "PMID:18356246") "An epithelial cell that is part of the bile duct. Cholangiocytes contribute to bile secretion via net release of bicarbonate and water. They are cuboidal epithelium in the small interlobular bile ducts, but become columnar and mucus secreting in larger bile ducts approaching the porta hepatis and the extrahepatic ducts.") +AnnotationAssertion(Annotation( "DOI:10.1016/j.jcmgh.2015.05.005") Annotation( "DOI:10.1016/j.jhep.2012.10.011") Annotation( "DOI:10.1038/s41575-019-0125-y") Annotation( "DOI:10.1152/ajpgi.00227.2012") Annotation( "DOI:10.5009/gnl16033") "This extended description was generated by ChatGPT and reviewed by the CellGuide team, who added references, and by the CL editors, who approved it for inclusion in CL. It may contain information that applies to only to some subtypes and species, and so should not be considered definitional. + +Cholangiocytes, also known as biliary epithelial cells, are specialized epithelial cells that line the biliary tract, which constitutes the gall bladder and bile ducts inside the liver. Crucial to the maintenance of the liver's health and function, cholangiocytes have a key role in the modification and secretion of bile, a fluid produced by hepatocytes that is essential to digestion and the absorption of fats and vitamins. +Cholangiocytes accomplish their primary function through the expression of a variety of transport proteins located on their apical and basolateral membranes, which propel bile acids and other contents of the bile into the biliary lumen. The hepatic bile, once secreted by the hepatocytes, is further modified by cholangiocytes via secretion and absorption processes. These processes help in the regulation of bile volume and composition, which is fundamental in ensuring the efficient digestion of dietary fats and fat-soluble vitamins and the excretion of cholesterol. +In addition to their role in bile modification, cholangiocytes also perform several other integral functions. For instance, these cells express Toll-like receptors (TLRs) which allow cholangiocytes to initiate an immune response against pathogens in the biliary lumen. When functioning normally, these cells contribute to biliary integrity, hepatic architecture, and overall hepatic physiology. However, when they become pathological, they are involved in the progression of liver diseases, such as primary biliary cirrhosis and cholangiocarcinoma – the malignancy of the biliary tract.") AnnotationAssertion( "FMA:86481") +AnnotationAssertion( "https://cellxgene.cziscience.com/cellguide/CL_1000488") AnnotationAssertion(rdfs:label "cholangiocyte") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) @@ -11782,7 +14518,14 @@ SubClassOf( ObjectSomeValuesFrom( (mesothelial cell of pleura) AnnotationAssertion(Annotation( "GOC:tfm") "A mesothelial cell that is part of the pleura.") +AnnotationAssertion(Annotation( "DOI:10.1016/j.ccm.2021.08.005") Annotation( "DOI:10.1016/j.coi.2020.04.005") Annotation( "DOI:10.1152/ajplung.90587.2008") Annotation( "DOI:10.3389/fphys.2014.00284") "This extended description was generated by ChatGPT and reviewed by the CellGuide team, who added references, and by the CL editors, who approved it for inclusion in CL. It may contain information that applies to only to some subtypes and species, and so should not be considered definitional. + +Mesothelial cells of the pleura form a significant part of the pleural membrane, a thin, double-layered serous membrane that lines the thoracic cavity and encompasses the lungs. These specialized cells contribute to the pleura's key function of producing a lubricating serous fluid, which reduces friction between the lung's outer surface (visceral pleura) and the inner lining of the thoracic cavity (parietal pleura) during respiration. +The cellular structure of mesothelial cells, characterized by microvilli on their surface, aids in the secretion and absorption of the pleural fluid, effectively supporting the smooth expansion and contraction of the lungs. Dysregulation in mesothelial cells can lead to pathologies, including pleural effusion and malignant mesothelioma. +Mesothelial cells of the pleura display unique immunologic properties. They act as a first line of defense against infection because they are able to recognize pathogens and respond by secreting various cytokines and chemokines. Additionally, these cells are directly involved in the translocation of immune cells into the pleural cavity during inflammatory response, thereby playing an active role in the immune response within the pleural environment. +In the event of pleural injury, these cells are also involved in the mesothelial-mesenchymal transition, a process that allows mesothelial cells to transdifferentiate into myofibroblasts and promote tissue repair.") AnnotationAssertion( "FMA:86737") +AnnotationAssertion( "https://cellxgene.cziscience.com/cellguide/CL_1000491") AnnotationAssertion(rdfs:label "mesothelial cell of pleura") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) @@ -11800,15 +14543,33 @@ SubClassOf( ObjectSomeValuesFrom( (mesothelial cell of visceral pleura) AnnotationAssertion(Annotation( "GOC:tfm") "A mesothelial cell that is part of the visceral pleura.") +AnnotationAssertion( ) +AnnotationAssertion(Annotation( "DOI:10.1016/S1357-2725(03)00242-5") Annotation( "DOI:10.1152/physrev.00026.2003") Annotation( "DOI:10.1371/journal.pone.0276978") Annotation( "DOI:10.3389/fphys.2014.00221") Annotation( "DOI:10.3390/jdb7020007") "This extended description was generated by ChatGPT and reviewed by the CellGuide team, who added references, and by the CL editors, who approved it for inclusion in CL. It may contain information that applies to only to some subtypes and species, and so should not be considered definitional. + +Mesothelial cells of visceral pleura are specialized epithelial cells that line the inner layer of the pleura, the membrane that envelops the lungs. Positioned adjacent to the lung tissue, these cells form a protective barrier and contribute to the structure of the visceral pleura. They are characterized by their cuboidal to squamous epithelial shape and the presence of microvilli on their surface, a feature aiding in fluid and solute exchange between the pleura and the lungs. +The primary function of mesothelial cells of visceral pleura is to secrete a lubricating serous fluid to facilitate smooth, frictionless lung movement within the thoracic cavity during respiration. This helps in the prevention of trauma or damage stemming from the constant rubbing of the lung tissue against the chest wall, hence playing a pivotal role in maintaining respiratory function. Besides fluid secretion, these cells have an essential role in the transportation of fluids and particles across the pleura, as well as in inflammation, wound healing, and tissue repair processes within the pleura. +Mesothelial cells of visceral pleura are notably implicated in the development of pleural diseases such as pleural effusion and pleural mesothelioma, a rare and aggressive form of cancer primarily linked with exposure to asbestos. Alterations, such as hyperplasia or metaplasia, may occur in these mesothelial cells under pathological conditions.") AnnotationAssertion( "FMA:86739") +AnnotationAssertion( "https://cellxgene.cziscience.com/cellguide/CL_1000493") AnnotationAssertion(rdfs:label "mesothelial cell of visceral pleura") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (small intestine goblet cell) + +AnnotationAssertion(Annotation( "GOC:tfm") "A goblet cell that is part of the small intestine.") +AnnotationAssertion( "FMA:86929") +AnnotationAssertion(rdfs:label "small intestine goblet cell") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (epithelial cell of exocrine pancreas) AnnotationAssertion(Annotation( "GOC:tfm") "An epithelial cell of the exocrine pancreas.") +AnnotationAssertion( ) AnnotationAssertion( "FMA:70986") AnnotationAssertion(rdfs:label "epithelial cell of exocrine pancreas") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) @@ -11834,6 +14595,7 @@ SubClassOf( ObjectSomeValuesFrom( (pulmonary artery endothelial cell) AnnotationAssertion(Annotation( "FBC:Autogenerated") "Any endothelial cell of vascular tree that is part of some pulmonary artery.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0001141") AnnotationAssertion(rdfs:label "pulmonary artery endothelial cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) @@ -11859,6 +14621,33 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (cerebral cortex glial cell) + +AnnotationAssertion(Annotation( "NPX:PDR") "Glial cell of cerebral cortex.") +AnnotationAssertion( "CALOHA:TS-1256") +AnnotationAssertion(rdfs:label "cerebral cortex glial cell") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (lateral ventricle glial cell) + +AnnotationAssertion(Annotation( "NPX:PDR") "Glial cell of lateral ventricle.") +AnnotationAssertion( "CALOHA:TS-1258") +AnnotationAssertion(rdfs:label "lateral ventricle glial cell") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (lateral ventricle neuron) + +AnnotationAssertion(Annotation( "NPX:PDR") "Neuron of lateral ventricle.") +AnnotationAssertion( "CALOHA:TS-1261") +AnnotationAssertion(rdfs:label "lateral ventricle neuron") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (colon glandular cell) AnnotationAssertion(Annotation( "NPX:PDR") "Glandular cell of colon epithelium. Example: Goblet cells; enterocytes or absorptive cells; enteroendocrine and M cells.") @@ -11910,6 +14699,7 @@ SubClassOf( ObjectSomeValuesFrom( (pancreas exocrine glandular cell) AnnotationAssertion(Annotation( "HPA:HPA") Annotation( "NPX:PDR") "Glandular cell of exocrine pancreas epithelium. Example: pancreatic acinar cell, glandular cells in pancreatic canaliculi, glandular cells in pancreatic ducts.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0000028") AnnotationAssertion( "CALOHA:TS-1242") AnnotationAssertion(rdfs:label "pancreas exocrine glandular cell") @@ -11919,6 +14709,17 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (cerebral cortex endothelial cell) + +AnnotationAssertion(Annotation( "NPX:PDR") "A distinct endothelial cell forming the walls of the capillaries within the cerebral cortex.") +AnnotationAssertion( "CALOHA:TS-2372") +AnnotationAssertion(rdfs:label "cerebral cortex endothelial cell") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (lung macrophage) AnnotationAssertion(Annotation( "HPA:HPA") Annotation( "NPX:PDR") "Circulating macrophages and tissue macrophages (alveolar macrophages) of lung.") @@ -11947,6 +14748,26 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (cerebellar neuron) + +AnnotationAssertion(Annotation( "NPX:PDR") "Neuron of the cerebellum.") +AnnotationAssertion( "CALOHA:TS-2359") +AnnotationAssertion( "FMA:84665") +AnnotationAssertion(rdfs:label "cerebellar neuron") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (epidermal melanocyte) + +AnnotationAssertion(Annotation( "GOC:TermGenie") "Any melanocyte that is part of a epidermis.") +AnnotationAssertion(rdfs:comment "These cells are found primarily, but not exclusively, in primates including humans") +AnnotationAssertion(rdfs:label "epidermal melanocyte") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (peripheral blood mononuclear cell) AnnotationAssertion(Annotation( "GOC:TermGenie") "A leukocyte with a single non-segmented nucleus in the mature form found in the circulatory pool of blood.") @@ -11956,6 +14777,14 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (brain macroglial cell) + +AnnotationAssertion(Annotation( "GOC:TermGenie") "Any macroglial cell that is part of a brain.") +AnnotationAssertion(rdfs:label "brain macroglial cell") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (microvascular endothelial cell) AnnotationAssertion(Annotation( "GOC:TermGenie") "Any blood vessel endothelial cell that is part of a microvascular endothelium.") @@ -12001,7 +14830,7 @@ SubClassOf( ObjectSomeValuesFrom( "GOC:TermGenie") "Any native cell that is part of a inner cell mass.") AnnotationAssertion(rdfs:label "inner cell mass cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cardiac septum cell) @@ -12012,6 +14841,22 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (spinal cord oligodendrocyte) + +AnnotationAssertion(Annotation( "GOC:TermGenie") "Any oligodendrocyte that is part of a spinal cord.") +AnnotationAssertion(rdfs:label "spinal cord oligodendrocyte") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (cerebellum glutamatergic neuron) + +AnnotationAssertion(Annotation( "GOC:TermGenie") "Any glutamatergic neuron that is part of a cerebellum.") +AnnotationAssertion(rdfs:label "cerebellum glutamatergic neuron") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) + # Class: (central nervous system neuron) AnnotationAssertion(Annotation( "GOC:TermGenie") "Any neuron that is part of a central nervous system.") @@ -12023,6 +14868,7 @@ SubClassOf( ObjectSomeValuesFrom( (peripheral nervous system neuron) AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "ISBN:0721662544") "A neuron that is part of a peripheral nervous system.") +AnnotationAssertion( ) AnnotationAssertion( "FMA:84664") AnnotationAssertion(rdfs:label "peripheral nervous system neuron") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) @@ -12071,6 +14917,15 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (primary motor cortex pyramidal cell) + +AnnotationAssertion(Annotation( "GOC:TermGenie") "Any pyramidal cell that is part of a primary motor cortex.") +AnnotationAssertion(rdfs:comment "http://www.ncbi.nlm.nih.gov/pubmed/12524689") +AnnotationAssertion(rdfs:label "primary motor cortex pyramidal cell") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (splenic fibroblast) AnnotationAssertion(Annotation( "GOC:TermGenie") "Any fibroblast that is part of a spleen.") @@ -12082,6 +14937,7 @@ SubClassOf( ObjectSomeValuesFrom( (splenic endothelial cell) AnnotationAssertion(Annotation( "GOC:TermGenie") "Any endothelial cell that is part of a spleen.") +AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "http://www.sciencellonline.com/site/productInformation.php?keyword=5500") AnnotationAssertion(rdfs:label "splenic endothelial cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) @@ -12118,6 +14974,7 @@ SubClassOf( ObjectSomeValuesFrom( (cardiac ventricle fibroblast) AnnotationAssertion(Annotation( "GOC:TermGenie") "Any fibroblast that is part of a cardiac ventricle.") +AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "http://www.sciencellonline.com/site/productInformation.php?keyword=6310") AnnotationAssertion(rdfs:label "cardiac ventricle fibroblast") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) @@ -12127,6 +14984,7 @@ SubClassOf( ObjectSomeValuesFrom( (cardiac atrium fibroblast) AnnotationAssertion(Annotation( "GOC:TermGenie") "Any fibroblast that is part of a cardiac atrium.") +AnnotationAssertion( ) AnnotationAssertion(rdfs:comment "http://www.sciencellonline.com/site/productInformation.php?keyword=6320") AnnotationAssertion(rdfs:label "cardiac atrium fibroblast") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) @@ -12195,6 +15053,14 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (melanocyte of skin of face) + +AnnotationAssertion(Annotation( "GOC:TermGenie") "Any melanocyte of skin that is part of a skin of face.") +AnnotationAssertion(rdfs:label "melanocyte of skin of face") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (bronchus fibroblast of lung) AnnotationAssertion(Annotation( "GOC:TermGenie") "Any fibroblast of lung that is part of a bronchus.") @@ -12220,9 +15086,237 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) +# Class: (intratelencephalic-projecting glutamatergic cortical neuron) + +AnnotationAssertion(Annotation( "PMID:34616075") "A glutamatergic neuron located in the cerebral cortex that projects to structures of telencephalic origins.") +AnnotationAssertion( ) +AnnotationAssertion( "ILX:0770100") +AnnotationAssertion(rdfs:label "intratelencephalic-projecting glutamatergic cortical neuron") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (extratelencephalic-projecting glutamatergic cortical neuron) + +AnnotationAssertion(Annotation( "DOI:10.1101/2020.10.19.343129") "A glutamatergic neuron located in the cerebral cortex that projects to structures not derived from telencephalon.") +AnnotationAssertion( ) +AnnotationAssertion( "ILX:0770101") +AnnotationAssertion(rdfs:label "extratelencephalic-projecting glutamatergic cortical neuron") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (lamp5 GABAergic cortical interneuron) + +AnnotationAssertion(Annotation( "PMID:30382198") Annotation( "PMID:37824655") Annotation( "https://cellxgene.cziscience.com/e/e4ddac12-f48f-4455-8e8d-c2a48a683437.cxg/") "A transcriptomically distinct GABAergic neuron located in the cerebral cortex that expresses Lamp5. The standard transcriptomic reference data for this cell type can be found on the CellxGene census under the collection: 'Transcriptomic cytoarchitecture reveals principles of human neocortex organization', dataset: 'Supercluster: CGE-derived interneurons', Author Categories: 'CrossArea_subclass', clusters Lamp5.") +AnnotationAssertion( "ILX:0770149") +AnnotationAssertion(rdfs:label "lamp5 GABAergic cortical interneuron") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (near-projecting glutamatergic cortical neuron) + +AnnotationAssertion(Annotation( "DOI:10.1101/2020.10.19.343129") "A glutamatergic neuron located in the cerebral cortex that projects axons locally rather than distantly.") +AnnotationAssertion( ) +AnnotationAssertion( "ILX:0770103") +AnnotationAssertion(rdfs:label "near-projecting glutamatergic cortical neuron") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (corticothalamic-projecting glutamatergic cortical neuron) + +AnnotationAssertion(Annotation( "DOI:10.1101/2020.10.19.343129") "A glutamatergic neuron located in the cerebral cortex that projects to the thalamus.") +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "corticothalamic-projecting glutamatergic cortical neuron") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (sncg GABAergic cortical interneuron) + +AnnotationAssertion(Annotation( "PMID:33186530") Annotation( "PMID:37824655") Annotation( "https://cellxgene.cziscience.com/e/e4ddac12-f48f-4455-8e8d-c2a48a683437.cxg/") "A transcriptomically distinct GABAergic neuron located in the cerebral cortex that expresses Gamma-synuclein. The standard transcriptomic reference data for this cell type can be found on the CellxGene census under the collection: 'Transcriptomic cytoarchitecture reveals principles of human neocortex organization', dataset: 'Supercluster: CGE-derived interneurons', Author Categories: 'CrossArea_subclass', clusters Sncg.") +AnnotationAssertion( "ILX:0770150") +AnnotationAssertion(rdfs:label "sncg GABAergic cortical interneuron") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (VIP GABAergic cortical interneuron) + +AnnotationAssertion(Annotation( "PMID:33186530") Annotation( "PMID:37824655") Annotation( "https://cellxgene.cziscience.com/e/e4ddac12-f48f-4455-8e8d-c2a48a683437.cxg/") "A transcriptomically distinct cortical GABAergic neuron that expresses the vasocactive intestinal polypeptide and that has its soma located in the cerebral cortex. The standard transcriptomic reference data for this cell type can be found on the CellxGene census under the collection: 'Transcriptomic cytoarchitecture reveals principles of human neocortex organization', dataset: 'Supercluster: CGE-derived interneurons', Author Categories: 'CrossArea_subclass', cluster Vip.") +AnnotationAssertion(Annotation( "PMID:26420784") Annotation( "PMID:31210267") Annotation( "PMID:33794534") Annotation( "PMID:35221922") "This neuronal type is distinguished by its heterogeneous morphology and electrophysiological characteristics (Pronneke et al., 2015,2020; Apicella and Marchionni, 2022). Variations in morphology and firing patterns are observed in human cortical VIP interneurons. In a study by Lee et al., 2023, four distinct subtypes of VIP neurons were identified, each exhibiting unique morphologies, soma locations, and electrophysiological properties. These subtypes are defined according to their transcriptomic markers: LBH-VIP and CCD184-VIP, both of which display a bipolar morphology with axons and dendrites extending across cortical layers; and SY16-VIP and ADAMTSL1-VIP, characterized by a dendritic arbor that spreads horizontally within the same layer as the soma (Lee et al., 2023). Disruption or malfunction of VIP cortical interneuron is implicated in neurodevelopmental disorders such as Rett Syndrome and Dravet Syndrome (Goff and Goldberg 2021).") +AnnotationAssertion( "ILX:0770151") +AnnotationAssertion(rdfs:label "VIP GABAergic cortical interneuron") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (sst GABAergic cortical interneuron) + +AnnotationAssertion(Annotation( "PMID:27477017") Annotation( "PMID:33742131") Annotation( "PMID:37824655") Annotation( "https://cellxgene.cziscience.com/e/9c63201d-bfd9-41a8-bbbc-18d947556f3d.cxg/") "A transcriptomically distinct GABAergic neuron located in the cerebral cortex that expresses somatostatin (sst). The standard transcriptomic reference data for this cell type can be found on the CellxGene census under the collection: 'Transcriptomic cytoarchitecture reveals principles of human neocortex organization', dataset: 'Supercluster: MGE-derived interneurons', Author Categories: 'CrossArea_subclass', cluster Sst.") +AnnotationAssertion( "ILX:0770152") +AnnotationAssertion(Annotation( "PMID:28821651") Annotation( "PMID:30792151") Annotation( "PMID:32494634") Annotation( "PMID:33742131") rdfs:comment "In the mouse cortex, sst GABAergic cortical interneurons show heterogeneous electrophysiological signatures varying between low-threshold spiking (LTS), regular-spiking and fast-spiking (Song, Y. H., Yoon, J., & Lee, S. H. 2021). Sst GABAergic cortical interneurons have multiple functional roles in the brain. In the mouse, they involved in the generation of slow-waves during the sleep phase of non-rapid eye-movement (NREM) (Funk, C. M. et al., 2017), they maintain synaptic plasticity during motor learning (Adler, A., Zhao, R., et al., 2021), they enhance visual perception in the V1 cortical area by suppressing the activity of pyramidal excitatory neurons (Song, YH. et al., 2020). In humans, malfunctioning of sst GABAergic cortical interneurons is associated with neurodegenerative and psychiatric disorders such as Parkinson's disease, Alzheimer's disease, major depressive disorder, bipolar disorder and schizophrenia as individuals affected by these pathologies show a decrease of expression of SST in the brain (Song YH., Yoon J. et al., 2021).") +AnnotationAssertion(rdfs:label "sst GABAergic cortical interneuron") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (pvalb GABAergic cortical interneuron) + +AnnotationAssertion(Annotation( "PMID:27477017") Annotation( "PMID:37824655") Annotation( "https://cellxgene.cziscience.com/e/9c63201d-bfd9-41a8-bbbc-18d947556f3d.cxg/") "A transcriptomically distinct GABAergic interneuron with a soma located in a cerebral cortex and it expresses Parvalbumin. The standard transcriptomic reference data for this cell type can be found on the CellxGene census under the collection: 'Transcriptomic cytoarchitecture reveals principles of human neocortex organization', dataset: 'Supercluster: MGE-derived interneurons', Author Categories: 'CrossArea_subclass', cluster Pvalb.") +AnnotationAssertion( "ILX:0770154") +AnnotationAssertion(rdfs:label "pvalb GABAergic cortical interneuron") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (chandelier pvalb GABAergic cortical interneuron) + +AnnotationAssertion(Annotation( "PMID:27477017") Annotation( "https://cellxgene.cziscience.com/e/9c63201d-bfd9-41a8-bbbc-18d947556f3d.cxg/") "A transcriptomically distinct pvalb GABAergic cortical interneuron that is recognizable by the straight terminal axonal 'cartridges' of vertically oriented strings of synaptic boutons. Chandelier PV cells' boutons target exclusively the axon initial segment (AIS) of pyramidal cells, with a single cell innervating hundreds of pyramidal cells in a clustered manner. The standard transcriptomic reference data for this cell type can be found on the CellxGene census under the collection: 'Transcriptomic cytoarchitecture reveals principles of human neocortex organization', dataset: 'Supercluster: CGE-derived interneurons', Author Categories: 'CrossArea_subclass', clusters Chandelier.") +AnnotationAssertion( "ILX:0107356") +AnnotationAssertion(Annotation( "PMID:27477017") rdfs:comment "In mice, Chandelier PV cells have soma found in in upper L2/3, with some in deep L5 and exhibit fast-spiking but lower firing rate compared to basket cells, and have practically absent hyperpolarization sag.") +AnnotationAssertion(rdfs:label "chandelier pvalb GABAergic cortical interneuron") +SubClassOf( ) +SubClassOf( ) + +# Class: (L6b glutamatergic cortical neuron) + +AnnotationAssertion(Annotation( "DOI:10.1101/2020.10.19.34312") Annotation( "PMID:30382198") Annotation( "PMID:37824655") Annotation( "https://cellxgene.cziscience.com/e/d01c9dff-abd1-4825-bf30-2eb2ba74597e.cxg/") "A glutamatergic neuron with a soma found in cortical layer 6b. They are transcriptomically related to corticothalamic-projecting neurons but have differential projections to the thalamus or anterior cingulate. The standard transcriptomic reference data for this cell type can be found on the CellxGene census under the collection: 'Transcriptomic cytoarchitecture reveals principles of human neocortex organization', dataset: 'Supercluster: Deep layer (non-IT) excitatory neuron', Author Categories: 'CrossArea_subclass', cluster L6b.") +AnnotationAssertion( ) +AnnotationAssertion( "ILX:0770163") +AnnotationAssertion(rdfs:label "L6b glutamatergic cortical neuron") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (L2/3-6 intratelencephalic projecting glutamatergic neuron) + +AnnotationAssertion(Annotation( "PMID:34616075") Annotation( "https://cellxgene.cziscience.com/e/c3aa4f95-7a18-4a7d-8dd8-ca324d714363.cxg/") "An intratelencephalic-projecting glutamatergic neuron with a soma found in cortical layers L2/3-6.") +AnnotationAssertion(rdfs:label "L2/3-6 intratelencephalic projecting glutamatergic neuron") +SubClassOf( ) + +# Class: (L5 extratelencephalic projecting glutamatergic cortical neuron) + +AnnotationAssertion(Annotation( "PMID:34616075") Annotation( "PMID:37824655") Annotation( "https://cellxgene.cziscience.com/e/d01c9dff-abd1-4825-bf30-2eb2ba74597e.cxg/") "A transcriptomically distinct glutamatergic neuron, with a soma found in the deeper portion of L5, that has long-range axonal projections including deep subcortical targets outside of the telencephalon and, in some cases, the spinal cord. While the L5 ET neuron projections are not limited to ET targets, they are clearly differentiated from the neuron subclasses whose projections are constrained to intratelencephalic (IT) targets. L5 ET neurons are generally the largest excitatory cortical neurons, typically having a thick apical dendrite with a prominent dendritic tuft in layer 1 and displaying burst-firing physiological characteristics. The standard transcriptomic reference data for this cell type can be found on the CellxGene census under the collection: 'Transcriptomic cytoarchitecture reveals principles of human neocortex organization', dataset: 'Supercluster: Deep layer (non-IT) excitatory neurons ', Author Categories: 'CrossArea_subclass', clusters L5 ET.") +AnnotationAssertion(rdfs:label "L5 extratelencephalic projecting glutamatergic cortical neuron") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (L6 corticothalamic-projecting glutamatergic cortical neuron) + +AnnotationAssertion(Annotation( "PMID:34616075") Annotation( "PMID:37824655") Annotation( "https://cellxgene.cziscience.com/e/d01c9dff-abd1-4825-bf30-2eb2ba74597e.cxg/") "A transcriptomically distinct corticothalamic-projecting neuron with a soma found in cortical layer 6. The standard transcriptomic reference data for this cell type can be found on the CellxGene census under the collection: 'Transcriptomic cytoarchitecture reveals principles of human neocortex organization', dataset: 'Supercluster: Deep layer (non-IT) excitatory neurons', Author Categories: 'CrossArea_subclass', clusters L6 CT.") +AnnotationAssertion(rdfs:label "L6 corticothalamic-projecting glutamatergic cortical neuron") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (L5/6 near-projecting glutamatergic neuron of the primary motor cortex) + +AnnotationAssertion(Annotation( "PMID:31209381") Annotation( "PMID:34616075") Annotation( "https://cellxgene.cziscience.com/e/d01c9dff-abd1-4825-bf30-2eb2ba74597e.cxg/") "A transcriptomically distinct near-projecting glutamatergic neuron with a soma found in layer 5/6 of the primary motor cortex. The standard transcriptomic reference data for this cell type can be found on the CellxGene census under the collection: 'Transcriptomic cytoarchitecture reveals principles of human neocortex organization', dataset: 'Supercluster: Deep layer (non-IT) excitatory neurons', Author Categories: 'CrossArea_subclass', cluster L5/6 NP.") +AnnotationAssertion( "ILX:0770161") +AnnotationAssertion(rdfs:label "L5/6 near-projecting glutamatergic neuron of the primary motor cortex") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (L6b glutamatergic neuron of the primary motor cortex) + +AnnotationAssertion(Annotation( "PMID:33184512") "An excitatory glutamatergic neuron transcriptomically related to the CT subclass, with a soma preferentially located in the bottom of L6 of the primary motor cortex.") +AnnotationAssertion(rdfs:label "L6b glutamatergic neuron of the primary motor cortex") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (L2/3 intratelencephalic projecting glutamatergic neuron of the primary motor cortex) + +AnnotationAssertion(Annotation( "PMID:34616075") "An intratelencephalic-projecting glutamatergic neuron with a soma found in cortical layer 2/3 of the primary motor cortex.") +AnnotationAssertion(rdfs:label "L2/3 intratelencephalic projecting glutamatergic neuron of the primary motor cortex") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (L5 intratelencephalic projecting glutamatergic neuron of the primary motor cortex) + +AnnotationAssertion(Annotation( "PMID:33184512") "An intratelencephalic-projecting glutamatergic neuron with a soma found in L5 of the primary motor cortex.") +AnnotationAssertion( "ILX:0770157") +AnnotationAssertion(rdfs:label "L5 intratelencephalic projecting glutamatergic neuron of the primary motor cortex") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (L6 intratelencephalic projecting glutamatergic neuron of the primary motor cortex) + +AnnotationAssertion(Annotation( "PMID:33184512") Annotation( "PMID:34616063") Annotation( "PMID:34616075") Annotation( "PMID:9236245") "An intratelencephalic-projecting glutamatergic neuron with a soma found in L6 of the primary motor cortex. These cells are short untufted pyramidal cells, which could be stellate or inverted.") +AnnotationAssertion( "ILX:0770158") +AnnotationAssertion(rdfs:label "L6 intratelencephalic projecting glutamatergic neuron of the primary motor cortex") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (cerebellar inhibitory GABAergic interneuron) + +AnnotationAssertion(Annotation( "FBC:Autogenerated") "Any GABAergic interneuron that has its soma located in some cerebellar cortex.") +AnnotationAssertion( ) +AnnotationAssertion(Annotation( "DOI:10.1101/2022.10.12.511898") rdfs:comment "A GABAergic interneuron whose soma is located in the cerebellar cortex.") +AnnotationAssertion(rdfs:label "cerebellar inhibitory GABAergic interneuron") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (medial ganglionic eminence derived interneuron) + +AnnotationAssertion(Annotation( "DOI:10.1101/2022.10.12.511898") "An interneuron that is derived from the medial ganglionic eminence.") +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "medial ganglionic eminence derived interneuron") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (caudal ganglionic eminence derived cortical interneuron) + +AnnotationAssertion(Annotation( "PMID:20130169") Annotation( "PMID:37824655") Annotation( "PMID:37824663") "An interneuron that is derived from the caudal ganglionic eminence.") +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "caudal ganglionic eminence derived cortical interneuron") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (thalamic excitatory neuron) + +AnnotationAssertion(Annotation( "DOI:10.1101/2022.10.12.511898") "An excitatory neuron that has its soma located in the thalamic complex.") +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "thalamic excitatory neuron") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (medial ganglionic eminence derived GABAergic cortical interneuron) + +AnnotationAssertion(Annotation( "PMID:12637172") "A GABAergic cortical interneuron that develops from the medial ganglionic eminence and has migrated to the cerebral cortex.") +AnnotationAssertion(rdfs:label "medial ganglionic eminence derived GABAergic cortical interneuron") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) + # Class: (brain vascular cell) AnnotationAssertion(Annotation( "DOI:10.1101/2022.10.12.511898") "A cell that is part of the brain vasculature.") +AnnotationAssertion( ) AnnotationAssertion(rdfs:label "brain vascular cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) @@ -12231,12 +15325,62 @@ SubClassOf( ObjectSomeValuesFrom( (midbrain-derived inhibitory neuron) AnnotationAssertion(Annotation( "DOI:10.1101/2022.10.12.511898") "A GABAergic inhibitory neuron that is derived from the midbrain.") +AnnotationAssertion( ) AnnotationAssertion(rdfs:label "midbrain-derived inhibitory neuron") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (chandelier cell) + +AnnotationAssertion(Annotation( "PMID:15378039") Annotation( "PMID:27199673") Annotation( "PMID:37824655") "A GABAergic interneuron that selectively innervates the axon initial segment of pyramidal cells. Their local axonal clusters are formed by high-frequency branching at shallow angles, often ramifying around, above or below their somata with a high bouton density. The characteristic terminal portions of the axon form short vertical rows of boutons, resembling the candlesticks and candles of a chandelier. Chandelier cells can be multipolar or bitufted.") +AnnotationAssertion(rdfs:label "chandelier cell") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (untufted pyramidal neuron) + +AnnotationAssertion(Annotation( "PMID:30715238") "A pyramidal neuron which lacks a clear tuft formation but extends to large radial distances.") +AnnotationAssertion(rdfs:label "untufted pyramidal neuron") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (reticulospinal neuron) + +AnnotationAssertion(Annotation( "PMID:29720934") "A neuron with soma location in the reticular formation with axons that extend into the spinal cord such. Reticulospinal neuron activity can lead to a variety of motor behaviors.") +AnnotationAssertion(rdfs:label "reticulospinal neuron") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (cerebral cortex pyramidal neuron) + +AnnotationAssertion(Annotation( "PMID:30715238") "A pyramidal neuron with soma located in the cerebral cortex.") +AnnotationAssertion(rdfs:label "cerebral cortex pyramidal neuron") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) + +# Class: (sst chodl GABAergic cortical interneuron) + +AnnotationAssertion(Annotation( "PMID:15845086") Annotation( "PMID:31209381") Annotation( "PMID:33372656") Annotation( "PMID:37824655") Annotation( "https://cellxgene.cziscience.com/e/9c63201d-bfd9-41a8-bbbc-18d947556f3d.cxg/") "A transcriptomically distinct sst GABAergic cortical interneuron that also expresses Chodl. These neurons are rare and correspond to the only known cortical interneurons with long-range projection. The standard transcriptomic reference data for this cell type can be found on the CellxGene census under the collection: 'Transcriptomic cytoarchitecture reveals principles of human neocortex organization', dataset: 'Supercluster: MGE-derived interneurons', Author Categories: 'CrossArea_subclass', clusters Sst Chodl.") +AnnotationAssertion(rdfs:label "sst chodl GABAergic cortical interneuron") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (myelinating glial cell) + +AnnotationAssertion(Annotation( "DOI:10.1007/3-540-29623-9_3240") "A glial cell that myelinates axonal processes.") +AnnotationAssertion(rdfs:label "myelinating glial cell") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (somatosensory neuron) AnnotationAssertion(Annotation( "PMID:22865660") "A neuron that is part of the somatic sensory system. Somatosensory neurons innervate the skin or integument to detect different types of thermal, chemical, and mechanical touch stimuli.") @@ -12257,6 +15401,7 @@ SubClassOf( ObjectSomeValuesFrom( (alveolar type 1 fibroblast cell) AnnotationAssertion(Annotation( "PMID:22268140") Annotation( "PMID:26706109") Annotation( "PMID:28886382") Annotation( "PMID:29489752") Annotation( "PMID:30675802") Annotation( "PMID:33624948") Annotation( "PMID:33707239") Annotation( "PMID:9074756") "A pulmonary interstitial fibroblast that is part of the alveolus and contains lipid droplets.") +AnnotationAssertion( ) AnnotationAssertion(rdfs:label "alveolar type 1 fibroblast cell") SubClassOf( ) SubClassOf( ) @@ -12265,11 +15410,21 @@ SubClassOf( ObjectSomeValuesFrom( (alveolar adventitial fibroblast) AnnotationAssertion(Annotation( "PMID:26706109") Annotation( "PMID:28886382") Annotation( "PMID:29752282") Annotation( "PMID:30675802") Annotation( "PMID:33208946") Annotation( "PMID:33624948") "A pulmonary interstitial fibroblast that is part of the alveolus and localizes to vascular adventitia.") +AnnotationAssertion( ) AnnotationAssertion(rdfs:label "alveolar adventitial fibroblast") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (choroidal melanocyte) + +AnnotationAssertion(Annotation( "PMID:31819095") Annotation( "http://orcid.org/0000-0002-0819-0473") "A melanocyte located in the vascular uvea and involved in photoprotection, regulation of oxidative damage and immune responses.") +AnnotationAssertion(Annotation( "PMID:31819095") Annotation( "PMID:34082079") rdfs:comment "Cellular functions and extracellular interactions of choroidal melanocytes are distinct to skin melanocytes. They might have both neuroectodermal as well as mesectodermal origins.") +AnnotationAssertion(rdfs:label "choroidal melanocyte") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (blood lymphocyte) AnnotationAssertion(Annotation( ) "A lymphocyte located in blood.") @@ -12283,7 +15438,7 @@ SubClassOf( "PMID:24987007") "Any cell that is located within the interstitium between the cells most prominent in defining a given tissue. \"Interstitial cell\" is a morphological term and refers to a variety of cells with differing origins and phenotypes.") AnnotationAssertion(rdfs:label "interstitial cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (respiratory ciliated cell) @@ -12294,26 +15449,138 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (L2/3 intratelencephalic projecting glutamatergic neuron) + +AnnotationAssertion(Annotation( "PMID:25622573") Annotation( "PMID:34004146") Annotation( "PMID:37292694") Annotation( "PMID:37824655") Annotation( "https://cellxgene.cziscience.com/e/c3aa4f95-7a18-4a7d-8dd8-ca324d714363.cxg/") "A transcriptomically distinct intratelencephalic-projecting glutamatergic neuron with a soma found between cortical layer 2-4. This intratelencephalic-projecting glutamatergic neuron has thin-tufted apical dendrites and extends its axonal projection into L5 in the neocortex. This neuronal type has a hyperpolarised resting membrane potential. The standard transcriptomic reference data for this cell type can be found on the CellxGene census under the collection: 'Transcriptomic cytoarchitecture reveals principles of human neocortex organization', dataset: 'Supercluster: IT-projecting excitatory neurons', Author Categories: 'CrossArea_subclass', clusters L2/3 IT.") +AnnotationAssertion( "ILX:0770156") +AnnotationAssertion(Annotation( "PMID:37824655") rdfs:comment "Hystorically, the L2/3 intratelencephalic projectic glutametergic neuron was known to have its soma in cortical layer 2/3. MERFISH data showed that this intratelencephalic-projecting glutametergic neuron can have its soma in layer 2/3, 4B, 4C. The position of the soma in layer 4b and 4C is less frequent for this neuronal type in comparison to cortical layer 2/3.") +AnnotationAssertion(rdfs:label "L2/3 intratelencephalic projecting glutamatergic neuron") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (L2 intratelencephalic projecting glutamatergic neuron) + +AnnotationAssertion(Annotation( "PMID:34004146") "An intratelencephalic-projecting glutamatergic neuron with a soma found in cortical layer 2.") +AnnotationAssertion(rdfs:label "L2 intratelencephalic projecting glutamatergic neuron") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (L3 intratelencephalic projecting glutamatergic neuron) + +AnnotationAssertion(Annotation( "PMID:34004146") "An intratelencephalic-projecting glutamatergic neuron with a soma found in cortical layer 3.") +AnnotationAssertion(rdfs:label "L3 intratelencephalic projecting glutamatergic neuron") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (L4 intratelencephalic projecting glutamatergic neuron) + +AnnotationAssertion(Annotation( "PMID:37292694") Annotation( "PMID:37824655") Annotation( "https://cellxgene.cziscience.com/e/c3aa4f95-7a18-4a7d-8dd8-ca324d714363.cxg/") "A transcriptomically distinct intratelencephalic-projecting glutamatergic neuron with a soma found in cortical layer 3-4. This neuron type can have a pyramidal, star-pyramidal or spiny stellate morphology and projects its output to L2/3 and L5A/B. The standard transcriptomic reference data for this cell type can be found on the CellxGene census under the collection: 'Transcriptomic cytoarchitecture reveals principles of human neocortex organization', dataset: 'Supercluster: IT-projecting excitatory neurons', Author Categories: 'CrossArea_subclass', L4 IT.") +AnnotationAssertion(rdfs:comment "Historically, the L4 intratelencephalic projectic glutametergic neuron was known to have its soma in cortical layer 4. MERFISH data showed that this intratelencephalic-projecting glutametergic neuron can also have its soma in layer 3.") +AnnotationAssertion(rdfs:label "L4 intratelencephalic projecting glutamatergic neuron") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (L5 intratelencephalic projecting glutamatergic neuron) + +AnnotationAssertion(Annotation( "PMID:37292694") Annotation( "PMID:37609206") Annotation( "PMID:37824655") Annotation( "https://cellxgene.cziscience.com/e/c3aa4f95-7a18-4a7d-8dd8-ca324d714363.cxg/") "An intratelencephalic-projecting glutamatergic neuron with a soma found in cortical layer 5. The standard transcriptomic reference data for this cell type can be found on the CellxGene census under the collection: 'Transcriptomic cytoarchitecture reveals principles of human neocortex organization', dataset: 'Supercluster: IT-projecting excitatory neurons', Author Categories: 'CrossArea_subclass', L5 IT.") +AnnotationAssertion( "ILX:0770157") +AnnotationAssertion(rdfs:label "L5 intratelencephalic projecting glutamatergic neuron") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (L6 intratelencephalic projecting glutamatergic neuron) + +AnnotationAssertion(Annotation( "PMID:37292694") Annotation( "PMID:37609206") Annotation( "PMID:37824655") Annotation( "https://cellxgene.cziscience.com/e/c3aa4f95-7a18-4a7d-8dd8-ca324d714363.cxg/") "A transcriptomically distinct intratelencephalic-projecting glutamatergic neuron with a soma found in L6 of the primary motor cortex. These cells are short untufted pyramidal cells, which could be stellate or inverted. The standard transcriptomic reference data for this cell type can be found on the CellxGene census under the collection: 'Transcriptomic cytoarchitecture reveals principles of human neocortex organization', dataset: 'Supercluster: IT-projecting excitatory neurons', Author Categories: 'CrossArea_subclass', L6 IT.") +AnnotationAssertion( "ILX:0770158") +AnnotationAssertion(rdfs:label "L6 intratelencephalic projecting glutamatergic neuron") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (L5/6 near-projecting glutamatergic neuron) + +AnnotationAssertion(Annotation( "PMID:34004146") Annotation( "PMID:37292694") Annotation( "PMID:37824655") "A near-projecting glutamatergic neuron with a soma found in cortical layer 5/6.") +AnnotationAssertion(rdfs:label "L5/6 near-projecting glutamatergic neuron") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (L6 intratelencephalic projecting Car3 glutamatergic neuron) + +AnnotationAssertion(Annotation( "PMID:34004146") Annotation( "PMID:37824655") Annotation( "doi:10.1007/s00424-024-02923-2") Annotation( "doi:10.1101/2022.11.30.518285") "A transcriptomically distinct intratelencepalic-projecting glutamatergic neuron that expresses Car3 with a soma found in L6 . The standard transcriptomic reference data for this cell type can be found on the CellxGene census under the collection: 'Transcriptomic cytoarchitecture reveals principles of human neocortex organization', dataset: 'Supercluster: IT-projecting excitatory neurons', Author Categories: 'CrossArea_cluster', L6 IT Car3.") +AnnotationAssertion(rdfs:label "L6 intratelencephalic projecting Car3 glutamatergic neuron") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (serous secreting cell of bronchus submucosal gland) AnnotationAssertion(Annotation( "PMID:5487122") Annotation( "PMID:9651178") "A(n) serous secreting cell that is part of a(n) bronchus submucosal gland.") +AnnotationAssertion( ) AnnotationAssertion(rdfs:label "serous secreting cell of bronchus submucosal gland") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (brush cell of epithelium of lobar bronchus) + +AnnotationAssertion(Annotation( "PMID:15817800") "A(n) brush cell that is part of a(n) epithelium of lobar bronchus.") +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "brush cell of epithelium of lobar bronchus") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (vein endothelial cell of respiratory system) AnnotationAssertion(Annotation( "PMID:34030460") "A(n) vein endothelial cell that is part of a(n) respiratory system.") +AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vein endothelial cell of respiratory system") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (goblet cell of epithelium of lobar bronchus) + +AnnotationAssertion(Annotation( "PMID:18757316") "A(n) goblet cell that is part of a(n) epithelium of lobar bronchus.") +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "goblet cell of epithelium of lobar bronchus") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (neuroendocrine cell of epithelium of lobar bronchus) + +AnnotationAssertion(Annotation( "PMID:26711336") Annotation( "PMID:33355253") "A(n) neuroendocrine cell that is part of a(n) epithelium of lobar bronchus.") +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "neuroendocrine cell of epithelium of lobar bronchus") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (suprabasal keratinocyte) + +AnnotationAssertion(Annotation( "PMID:35883599") Annotation( "PMID:9520465") Annotation( "https://www.proteinatlas.org/humanproteome/single+cell+type/squamous+epithelial+cells#suprabasalkeratinocytes") "A keratinocyte of the epidermis suprabasal layer. This cell may express the differentiation markers keratin 10 and keratin 1.") +AnnotationAssertion(rdfs:label "suprabasal keratinocyte") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (bronchiolar smooth muscle cell) AnnotationAssertion(Annotation( "ISBN:9781260462982") Annotation( "PMID:15347627") "A smooth muscle cell that is part of a bronchiole.") +AnnotationAssertion( ) AnnotationAssertion(rdfs:label "bronchiolar smooth muscle cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) @@ -12322,6 +15589,7 @@ SubClassOf( ObjectSomeValuesFrom( (lung megakaryocyte) AnnotationAssertion(Annotation( "PMID:33351116") "A megakaryocyte that is resident in the lung connective tissue.") +AnnotationAssertion( ) AnnotationAssertion(rdfs:label "lung megakaryocyte") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) @@ -12331,6 +15599,7 @@ SubClassOf( ObjectSomeValuesFrom( (mucus secreting cell of trachea gland) AnnotationAssertion(Annotation( "PMID:18931053") Annotation( "PMID:29656943") "A mucus secreting cell that is part of a submucosal gland of the trachea.") +AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mucus secreting cell of trachea gland") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) @@ -12340,12 +15609,21 @@ SubClassOf( ObjectSomeValuesFrom( (mucus secreting cell of bronchus submucosal gland) AnnotationAssertion(Annotation( "PMID:19965983") "A mucus secreting cell of a submucosal gland of the bronchus.") +AnnotationAssertion( ) AnnotationAssertion(rdfs:label "mucus secreting cell of bronchus submucosal gland") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (airway submucosal gland collecting duct epithelial cell) + +AnnotationAssertion(Annotation( "PMID:25648514") Annotation( "PMID:29656943") "An epithelial cell that is part of a collecting duct of an airway submucosal gland.") +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "airway submucosal gland collecting duct epithelial cell") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (mucus secreting cell of tracheobronchial tree submucosal gland) AnnotationAssertion(Annotation( "PMID:30864819") "A mucus secreting cell of a submucosal gland of the tracheobronchial tree.") @@ -12359,6 +15637,7 @@ SubClassOf( ObjectSomeValuesFrom( (CCL3-positive alveolar macrophage) AnnotationAssertion(Annotation( "PMID:37291214") "An alveolar macrophage that expresses CCL3.") +AnnotationAssertion( ) AnnotationAssertion(rdfs:label "CCL3-positive alveolar macrophage") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -12366,9 +15645,50 @@ SubClassOf( ObjectSomeValuesFrom( (metallothionein-positive alveolar macrophage) AnnotationAssertion(Annotation( "PMID:37291214") "An alveolar macrophage that expresses metallothionein.") +AnnotationAssertion( ) AnnotationAssertion(rdfs:label "metallothionein-positive alveolar macrophage") SubClassOf( ) +# Class: (lung interstitial macrophage) + +AnnotationAssertion(Annotation( "PMID:33382972") Annotation( "PMID:35017701") Annotation( "PMID:36211428") "A macrophage that is part of the lung connective tissue (pulmonary interstitium). This cell performs tissue remodeling and contributes to barrier immunity through antigen presentation.") +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "lung interstitial macrophage") +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (respiratory suprabasal cell) + +AnnotationAssertion(Annotation( "PMID:25564622") "A respiratory epithelial cell with topographic nuclear position in between the basal and luminal cell of the airway epithelium. This non-basal, intermediate cell has limited proliferative capacity, ultrastructural features of basal cells and no defined features of the typically differentiated cellular phenotypes.") +AnnotationAssertion( ) +AnnotationAssertion(Annotation( "PMID:25658372") Annotation( "doi:10.1101/2023.04.20.537495") rdfs:comment "In humans, respiratory suprabasal cells have been noted to have enriched expression of the following: CK8, KRT13, IVL, and SERPINB3.") +AnnotationAssertion(rdfs:label "respiratory suprabasal cell") +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (taste receptor cell of tongue) + +AnnotationAssertion(Annotation( "DOI:10.1111/j.1096-3642.1981.tb01137.x") Annotation( "PMID:10052456") Annotation( "PMID:28655883") Annotation( "http://www.nejohnston.org/Birds/documents/AvianTongues_Johnston.pdf") "A taste receptor cell that is part of a taste bud of a tongue.") +AnnotationAssertion(rdfs:label "taste receptor cell of tongue") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (catecholaminergic neuron) + +AnnotationAssertion(Annotation( "ISBN:0521442516") Annotation( "PMID:12094209") "A neuron that releases catecholamine as a neurotransmitter.") +AnnotationAssertion(Annotation( "PMID:10191060") Annotation( "PMID:12128258") Annotation( "PMID:34880760") Annotation( "https://orcid.org/0000-0002-2244-7917") rdfs:comment "Frequently used when describing the developing nervous system in zebrafish. A catecholaminergic neuron expresses tyrosine hydroxylase (TH), tyrosine hydroxylase 2 (TH2), aromatic amino acid decarboxylase (AADC), dopamine b-hydroxylase (DBH), and phenylethanolamine-N-methyl transferase (PEMT), which are enzymes necessary for catecholamine synthesis.") +AnnotationAssertion(rdfs:label "catecholaminergic neuron") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (perivascular cell) AnnotationAssertion(Annotation( "PMID:24928499") Annotation( "PMID:27889329") "A cell that is adjacent to a vessel. A perivascular cell plays a crucial role in maintaining vascular function and tissue homeostasis. This cell type regulates vessel integrity and flow dynamics.") @@ -12385,6 +15705,86 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (cycling T cell) + +AnnotationAssertion(Annotation( "PMID:37291214") "A(n) T cell that is cycling.") +AnnotationAssertion(rdfs:label "cycling T cell") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (cycling dendritic cell) + +AnnotationAssertion(Annotation( "PMID:32066951") "A(n) dendritic cell that is cycling.") +AnnotationAssertion(rdfs:label "cycling dendritic cell") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) + +# Class: (cycling monocyte) + +AnnotationAssertion(Annotation( "PMID:31348891") "A(n) monocyte that is cycling.") +AnnotationAssertion(rdfs:label "cycling monocyte") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) + +# Class: (cycling macrophage) + +AnnotationAssertion(Annotation( "PMID:33208946") "A(n) macrophage that is cycling.") +AnnotationAssertion(rdfs:label "cycling macrophage") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) + +# Class: (cycling alveolar macrophage) + +AnnotationAssertion(Annotation( "PMID:37291214") "A(n) alveolar macrophage that is cycling.") +AnnotationAssertion(rdfs:label "cycling alveolar macrophage") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) + +# Class: (cycling mononuclear phagocyte) + +AnnotationAssertion(Annotation( "PMID:37468583") "A(n) mononuclear phagocyte that is cycling.") +AnnotationAssertion(rdfs:label "cycling mononuclear phagocyte") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (cycling pulmonary alveolar type 2 cell) + +AnnotationAssertion(Annotation( "PMID:37291214") "A(n) pulmonary alveolar type 2 cell that is cycling.") +AnnotationAssertion(rdfs:label "cycling pulmonary alveolar type 2 cell") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (cycling myeloid cell) + +AnnotationAssertion(Annotation( "PMID:38301653") "A(n) myeloid cell that is cycling.") +AnnotationAssertion(rdfs:label "cycling myeloid cell") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (cycling basal cell) + +AnnotationAssertion(Annotation( "PMID:33208946") "A(n) basal cell that is cycling.") +AnnotationAssertion(rdfs:label "cycling basal cell") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (fetal pre-type II pulmonary alveolar epithelial cell) AnnotationAssertion(Annotation( "PMID:1316350") "Precursor of type II pneumocyte. These cells do not have lamellar bodies, which are a marker of type II pneumocyte maturity.") @@ -12399,6 +15799,58 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (Lamp5 Lhx6 neuron) + +AnnotationAssertion(Annotation( "PMID:34004146") Annotation( "PMID:36007006") Annotation( "PMID:37824655") Annotation( "PMID:37824669") Annotation( "https://cellxgene.cziscience.com/e/e4ddac12-f48f-4455-8e8d-c2a48a683437.cxg/") "A transcriptomically distinct lamp5 GABAergic cortical interneuron located in the cerebral cortex that expresses Lamp5 and Lhx6. The standard transcriptomic reference data for this cell type can be found on the CellxGene census under the collection: 'Transcriptomic cytoarchitecture reveals principles of human neocortex organization', dataset: 'Supercluster: CGE-derived interneurons', Author Categories: 'CrossArea_subclass', Lamp5 Lhx6.") +AnnotationAssertion(rdfs:label "Lamp5 Lhx6 neuron"@en) +SubClassOf( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) + +# Class: (cycling stromal cell) + +AnnotationAssertion(Annotation( "PMID:34497389") "A(n) stromal cell that is cycling.") +AnnotationAssertion(rdfs:label "cycling stromal cell") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (cycling glial cell) + +AnnotationAssertion(Annotation( "PMID:34497389") "A(n) glial cell that is cycling.") +AnnotationAssertion(rdfs:label "cycling glial cell") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (cycling neuroblast (sensu Vertebrata)) + +AnnotationAssertion(Annotation( "PMID:34497389") "A(n) neuroblast (sensu Vertebrata) that is cycling.") +AnnotationAssertion(rdfs:label "cycling neuroblast (sensu Vertebrata)") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (syncytial cell) + +AnnotationAssertion(Annotation( "PMID:20851884") Annotation( "Wikipedia:Syncytium") "A multinucleate cell formed by the fusion of multiple uninuclear cells through plasma membrane fusion. This process leads to a single large cell containing multiple nuclei within a shared cytoplasm.") +AnnotationAssertion(rdfs:label "syncytial cell") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (intestinal villus capillary endothelial cell) + +AnnotationAssertion(Annotation( "PMID:18480313") Annotation( "PMID:35810168") Annotation( "PMID:38051275") "A capillary endothelial cell that is part of the intestinal villus. This cell is highly fenestrated, with fenestrations most numerous at the villus tips, and plays a vital role in nutrient absorption and maintaining the selective permeability of the intestinal barrier.") +AnnotationAssertion(rdfs:label "intestinal villus capillary endothelial cell") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (vacuole inheritance) AnnotationAssertion(Annotation( "GOC:mcc") Annotation( "PMID:10873824") Annotation( "PMID:14616069") "The distribution of vacuoles into daughter cells after mitosis or meiosis, mediated by interactions between vacuoles and the cytoskeleton.") @@ -12505,7 +15957,7 @@ AnnotationAssertion(Annotation( "NIF_Subcellular:sao1615953555") AnnotationAssertion(rdfs:comment "Chromosomes include parts that are not part of the chromatin. Examples include the kinetochore.") AnnotationAssertion(rdfs:label "chromatin") -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (euchromatin) @@ -12532,12 +15984,26 @@ SubClassOf( ) SubClassOf( ) +# Class: (regulation of glutamine family amino acid metabolic process) + +AnnotationAssertion(Annotation( "GOC:go_curators") "Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving amino acids of the glutamine family, comprising arginine, glutamate, glutamine and proline.") +AnnotationAssertion(rdfs:label "regulation of glutamine family amino acid metabolic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) + # Class: (cell morphogenesis) AnnotationAssertion(Annotation( "GOC:clt") Annotation( "GOC:dph") Annotation( "GOC:go_curators") Annotation( "GOC:tb") "The developmental process in which the size or shape of a cell is generated and organized.") AnnotationAssertion(rdfs:label "cell morphogenesis") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +# Class: (response to acid chemical) + +AnnotationAssertion(Annotation( "GOC:go_curators") Annotation( "GOC:rn") "Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus by the chemical structure of the anion portion of a dissociated acid (rather than the acid acting as a proton donor). The acid chemical may be in gaseous, liquid or solid form.") +AnnotationAssertion(rdfs:comment "This term should be used to describe a response to a specific acid as a chemical. E.g., if an organism were responding to glutamate, then the response would be glutamate-specific; the organism is actually responding to the chemical structure of the anion portion of the dissociated acid. Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC. If annotating experiments where an acid is playing a role as a proton donor, please annotate to GO:0010447 'response to acidic pH' instead.") +AnnotationAssertion(rdfs:label "response to acid chemical") +SubClassOf( ) + # Class: (skeletal system development) AnnotationAssertion(Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GOC:tb") "The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton).") @@ -12895,6 +16361,24 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (neutrophil homeostasis) + +AnnotationAssertion(Annotation( "GOC:add") Annotation( "GOC:pr") Annotation( "PMID:12752675") Annotation( "PMID:12960266") "The process of regulating the proliferation and elimination of neutrophils such that the total number of neutrophils within a whole or part of an organism is stable over time in the absence of an outside stimulus.") +AnnotationAssertion(rdfs:comment "Note that this term represents the return of neutrophil levels to stable numbers following an immune response as well as the proliferation and elimination of neutrophils required to maintain stable numbers in the absence of an outside stimulus.") +AnnotationAssertion(rdfs:label "neutrophil homeostasis") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) + +# Class: (neutrophil apoptotic process) + +AnnotationAssertion(Annotation( "CL:0000775") Annotation( "GOC:add") Annotation( "GOC:mtg_apoptosis") Annotation( "PMID:12752675") Annotation( "PMID:12960266") "Any apoptotic process in a neutrophil, any of the immature or mature forms of a granular leukocyte that in its mature form has a nucleus with three to five lobes connected by slender threads of chromatin, and cytoplasm containing fine inconspicuous granules and stainable by neutral dyes.") +AnnotationAssertion(rdfs:label "neutrophil apoptotic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (cytokine production) AnnotationAssertion(Annotation( "GOC:add") Annotation( "ISBN:0781735149") "The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.") @@ -12929,7 +16413,7 @@ EquivalentClasses( ObjectIntersection # Class: (serotonin secretion) -AnnotationAssertion(Annotation( "GOC:ef") Annotation( "ISBN:0198506732") Annotation( "ISBN:0781735149") "The regulated release of serotonin by a cell. Serotonin (5-hydroxytryptamine, or 5-HT) is a monoamine synthesised in serotonergic neurons in the central nervous system, enterochromaffin cells in the gastrointestinal tract and some immune system cells.") +AnnotationAssertion(Annotation( "GOC:ef") Annotation( "ISBN:0198506732") Annotation( "ISBN:0781735149") "The regulated release of serotonin by a cell. Serotonin (5-hydroxytryptamine, or 5-HT) is a monoamine synthesized in serotonergic neurons in the central nervous system, enterochromaffin cells in the gastrointestinal tract and some immune system cells.") AnnotationAssertion(rdfs:label "serotonin secretion") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) @@ -13144,6 +16628,13 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (positive regulation of neurotransmitter secretion) + +AnnotationAssertion(Annotation( "GOC:hjd") "Any process that activates or increases the frequency, rate or extent of the regulated release of a neurotransmitter.") +AnnotationAssertion(rdfs:label "positive regulation of neurotransmitter secretion") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (intramembranous ossification) AnnotationAssertion(Annotation( "ISBN:0878932437") "Direct ossification that occurs within mesenchyme or an accumulation of relatively unspecialized cells.") @@ -13173,6 +16664,24 @@ AnnotationAssertion(Annotation( "regulation of heart rate") SubClassOf( ) +# Class: (regulation of L-glutamate import across plasma membrane) + +AnnotationAssertion(Annotation( "GOC:TermGenie") "Any process that modulates the frequency, rate or extent of L-glutamate import into a cell.") +AnnotationAssertion(rdfs:label "regulation of L-glutamate import across plasma membrane") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (negative regulation of L-glutamate import across plasma membrane) + +AnnotationAssertion(Annotation( "GOC:TermGenie") "Any process that stops, prevents or reduces the frequency, rate or extent of L-glutamate import into a cell.") +AnnotationAssertion(rdfs:label "negative regulation of L-glutamate import across plasma membrane") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (positive regulation of L-glutamate import across plasma membrane) + +AnnotationAssertion(Annotation( "GOC:TermGenie") "Any process that activates or increases the frequency, rate or extent of L-glutamate import into a cell.") +AnnotationAssertion(rdfs:label "positive regulation of L-glutamate import across plasma membrane") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + # Class: (positive regulation of neuroblast proliferation) AnnotationAssertion(Annotation( "GOC:dph") "Any process that activates or increases the rate of neuroblast proliferation.") @@ -13316,12 +16825,55 @@ AnnotationAssertion(rdfs:label "oste EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +# Class: (cytoplasmic translation) + +AnnotationAssertion(Annotation( "GOC:hjd") "The chemical reactions and pathways resulting in the formation of a protein in the cytoplasm. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein.") +AnnotationAssertion(rdfs:comment "Note that this term applies to translation performed by cytoplasmic ribosomes, which is distinct from translation performed by organellar ribosomes. For mitochondrial translation, consider GO:0032543 'mitochondrial translation' or its child terms.") +AnnotationAssertion(rdfs:label "cytoplasmic translation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) + +# Class: (cytoplasmic translational elongation) + +AnnotationAssertion(Annotation( "GOC:hjd") "The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis in the cytoplasm.") +AnnotationAssertion(rdfs:label "cytoplasmic translational elongation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) + +# Class: (cytoplasmic translational initiation) + +AnnotationAssertion(Annotation( "GOC:hjd") "The process preceding formation of the peptide bond between the first two amino acids of a protein in the cytoplasm. This includes the formation of a complex of the ribosome, mRNA or circRNA, and an initiation complex that contains the first aminoacyl-tRNA.") +AnnotationAssertion(rdfs:label "cytoplasmic translational initiation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) + +# Class: (cytoplasmic translational termination) + +AnnotationAssertion(Annotation( "GOC:hjd") "The process resulting in the release of a polypeptide chain from the ribosome in the cytoplasm, usually in response to a termination codon.") +AnnotationAssertion(rdfs:label "cytoplasmic translational termination") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (defense response to insect) AnnotationAssertion(Annotation( "GOC:add") "A response to protect an organism from a directly detected or perceived external threat from an insect or insects to that organism.") AnnotationAssertion(rdfs:label "defense response to insect") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +# Class: (defense response to nematode) + +AnnotationAssertion(Annotation( "GOC:add") Annotation( "PMID:11516579") Annotation( "PMID:14506883") "A response to protect an organism from a directly detected or perceived external threat from a nematode or nematodes, which results in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack.") +AnnotationAssertion(rdfs:label "defense response to nematode") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (positive regulation of antimicrobial peptide production) + +AnnotationAssertion(Annotation( "GOC:add") Annotation( "PMID:11807545") "Any process that activates or increases the frequency, rate, or extent of antimicrobial peptide production.") +AnnotationAssertion(rdfs:label "positive regulation of antimicrobial peptide production") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (leukocyte chemotaxis involved in inflammatory response) AnnotationAssertion(Annotation( "GOC:add") Annotation( "ISBN:0781735149") "The movement of an immune cell in response to an external stimulus contributing to an inflammatory response.") @@ -13433,6 +16985,13 @@ AnnotationAssertion(rdfs:label "macr EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (neutrophil activation involved in immune response) + +AnnotationAssertion(Annotation( "GOC:add") Annotation( "ISBN:0781735149") "The change in morphology and behavior of a neutrophil resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor, leading to the initiation or perpetuation of an immune response.") +AnnotationAssertion(rdfs:label "neutrophil activation involved in immune response") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) + # Class: (myeloid dendritic cell differentiation involved in immune response) AnnotationAssertion(Annotation( "GOC:add") Annotation( "ISBN:0781735149") "The process in which an immature myeloid dendritic cell acquires the specialized features of a mature myeloid dendritic cell as part of an immune response.") @@ -13611,6 +17170,13 @@ AnnotationAssertion(rdfs:label "myel EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +# Class: (neutrophil mediated immunity) + +AnnotationAssertion(Annotation( "GOC:add") Annotation( "GO_REF:0000022") Annotation( "ISBN:0781735149") "Any process involved in the carrying out of an immune response by a neutrophil.") +AnnotationAssertion(rdfs:label "neutrophil mediated immunity") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) + # Class: (lymphocyte mediated immunity) AnnotationAssertion(Annotation( "GOC:add") Annotation( "GO_REF:0000022") Annotation( "ISBN:0781735149") "Any process involved in the carrying out of an immune response by a lymphocyte.") @@ -14126,6 +17692,18 @@ AnnotationAssertion(Annotation( "positive regulation of myeloid dendritic cell cytokine production") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +# Class: (regulation of antimicrobial humoral response) + +AnnotationAssertion(Annotation( "GOC:add") "Any process that modulates the frequency, rate, or extent of an antimicrobial humoral response.") +AnnotationAssertion(rdfs:label "regulation of antimicrobial humoral response") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (positive regulation of antimicrobial humoral response) + +AnnotationAssertion(Annotation( "GOC:add") "Any process that activates or increases the frequency, rate, or extent of an antimicrobial humoral response.") +AnnotationAssertion(rdfs:label "positive regulation of antimicrobial humoral response") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + # Class: (regulation of myeloid leukocyte differentiation) AnnotationAssertion(Annotation( "GOC:add") "Any process that modulates the frequency, rate, or extent of myeloid leukocyte differentiation.") @@ -14144,6 +17722,35 @@ AnnotationAssertion(Annotation( "positive regulation of myeloid leukocyte differentiation") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +# Class: (antimicrobial peptide production) + +AnnotationAssertion(Annotation( "GOC:add") Annotation( "ISBN:0781735149") Annotation( "PMID:11807545") Annotation( "PMID:15638771") "The synthesis or release of an antimicrobial peptide during an immune response, resulting in an increase in intracellular or extracellular levels. Such peptides may have protective properties against bacteria, fungi, viruses, or protozoa.") +AnnotationAssertion(rdfs:comment "Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select one of the 'regulation' children terms.") +AnnotationAssertion(rdfs:label "antimicrobial peptide production") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (antimicrobial peptide secretion) + +AnnotationAssertion(Annotation( "GOC:add") Annotation( "ISBN:0781735149") Annotation( "PMID:11807545") Annotation( "PMID:15638771") "The regulated release of an antimicrobial peptide from a cell or a tissue. Such peptides may have protective properties against bacteria, fungi, viruses, or protozoa.") +AnnotationAssertion(rdfs:label "antimicrobial peptide secretion") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (regulation of antimicrobial peptide production) + +AnnotationAssertion(Annotation( "GOC:add") "Any process that modulates the frequency, rate, or extent of antimicrobial peptide production.") +AnnotationAssertion(rdfs:label "regulation of antimicrobial peptide production") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (negative regulation of antimicrobial peptide production) + +AnnotationAssertion(Annotation( "GOC:add") "Any process that stops, prevents, or reduces the frequency, rate, or extent of antimicrobial peptide production.") +AnnotationAssertion(rdfs:label "negative regulation of antimicrobial peptide production") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (peptide secretion) AnnotationAssertion(Annotation( "GOC:add") "The controlled release of a peptide from a cell or a tissue.") @@ -14176,6 +17783,27 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) +# Class: (regulation of antimicrobial peptide secretion) + +AnnotationAssertion(Annotation( "GOC:add") "Any process that modulates the frequency, rate, or extent of antimicrobial peptide secretion.") +AnnotationAssertion(rdfs:label "regulation of antimicrobial peptide secretion") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (negative regulation of antimicrobial peptide secretion) + +AnnotationAssertion(Annotation( "GOC:add") "Any process that stops, prevents, or reduces the frequency, rate, or extent of antimicrobial peptide secretion.") +AnnotationAssertion(rdfs:label "negative regulation of antimicrobial peptide secretion") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (positive regulation of antimicrobial peptide secretion) + +AnnotationAssertion(Annotation( "GOC:add") "Any process that activates or increases the frequency, rate, or extent of antimicrobial peptide secretion.") +AnnotationAssertion(rdfs:label "positive regulation of antimicrobial peptide secretion") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (regulation of adaptive immune response) AnnotationAssertion(Annotation( "GOC:add") "Any process that modulates the frequency, rate, or extent of an adaptive immune response.") @@ -14254,6 +17882,24 @@ AnnotationAssertion(Annotation( "positive regulation of myeloid leukocyte mediated immunity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +# Class: (regulation of humoral immune response) + +AnnotationAssertion(Annotation( "GOC:add") "Any process that modulates the frequency, rate, or extent of a humoral immune response.") +AnnotationAssertion(rdfs:label "regulation of humoral immune response") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (negative regulation of humoral immune response) + +AnnotationAssertion(Annotation( "GOC:add") "Any process that stops, prevents, or reduces the frequency, rate, or extent of a humoral immune response.") +AnnotationAssertion(rdfs:label "negative regulation of humoral immune response") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (positive regulation of humoral immune response) + +AnnotationAssertion(Annotation( "GOC:add") "Any process that activates or increases the frequency, rate, or extent of a humoral immune response.") +AnnotationAssertion(rdfs:label "positive regulation of humoral immune response") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + # Class: (tendon sheath development) AnnotationAssertion(Annotation( "PMID:20696843") "The process whose specific outcome is the progression of a tendon sheath over time, from its formation to the mature structure. A tendon sheath is a layer of membrane around a tendon. It permits the tendon to move.") @@ -14926,6 +18572,7 @@ AnnotationAssertion(rdfs:label "hear EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (heart rudiment formation) @@ -14966,6 +18613,21 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (amino acid transmembrane transport) + +AnnotationAssertion(Annotation( "GOC:dph") Annotation( "GOC:tb") "The process in which an amino acid is transported across a membrane.") +AnnotationAssertion(rdfs:comment "Note that this term is not intended for use in annotating lateral movement within membranes.") +AnnotationAssertion(rdfs:label "amino acid transmembrane transport") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) + +# Class: (keratinocyte development) + +AnnotationAssertion(Annotation( "GOC:dph") "The process whose specific outcome is the progression of a keratinocyte over time, from its formation to the mature structure.") +AnnotationAssertion(rdfs:label "keratinocyte development") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (cilium movement) AnnotationAssertion(Annotation( "GOC:dph") Annotation( "GOC:jl") "The directed, self-propelled movement of a cilium.") @@ -15045,6 +18707,21 @@ AnnotationAssertion(rdfs:comment "No AnnotationAssertion(rdfs:label "negative regulation of cilium movement") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +# Class: (noradrenergic neuron differentiation) + +AnnotationAssertion(Annotation( "GOC:dph") "The process in which a relatively unspecialized cell acquires specialized features of an noradrenergic neuron, a neuron that secretes noradrenaline.") +AnnotationAssertion(rdfs:label "noradrenergic neuron differentiation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) + +# Class: (noradrenergic neuron development) + +AnnotationAssertion(Annotation( "GOC:dph") "The process whose specific outcome is the progression of a noradrenergic neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell.") +AnnotationAssertion(rdfs:label "noradrenergic neuron development") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (brainstem development) AnnotationAssertion(Annotation( "GOC:dph") "The progression of the brainstem from its formation to the mature structure. The brainstem is the part of the brain that connects the brain with the spinal cord.") @@ -15053,6 +18730,12 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) +# Class: (noradrenergic neuron differentiation involved in brainstem development) + +AnnotationAssertion(Annotation( "GOC:dph") "The process in which a relatively unspecialized cell acquires specialized features of an noradrenergic neuron that is part of the brainstem.") +AnnotationAssertion(rdfs:label "noradrenergic neuron differentiation involved in brainstem development") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + # Class: (establishment of cell polarity involved in ameboidal cell migration) AnnotationAssertion(Annotation( "GOC:ascb_2009") Annotation( "GOC:dph") Annotation( "GOC:tb") "The specification and formation of anisotropic intracellular organization that contributes to the self-propelled directed movement of an ameboid cell.") @@ -15167,31 +18850,6 @@ SubClassOf( ) DisjointClasses( ) -# Class: (catalytic activity) - -AnnotationAssertion(Annotation( "GOC:vw") Annotation( "ISBN:0198506732") "Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.") -AnnotationAssertion( "Wikipedia:Enzyme") -AnnotationAssertion(rdfs:label "catalytic activity") -SubClassOf( ) - -# Class: (nuclease activity) - -AnnotationAssertion(Annotation( "ISBN:0198547684") "Catalysis of the hydrolysis of ester linkages within nucleic acids.") -AnnotationAssertion(rdfs:comment "Note that 'tRNA nucleotidyltransferase activity ; GO:0009022', also known as 'ribonuclease PH', and 'DNA-(apurinic or apyrimidinic site) lyase activity ; GO:0003906' do not have parentage in the 'nuclease activity' branch of the ontology because both GO and the Enzyme Commission define nuclease activity as a type of hydrolysis.") -AnnotationAssertion(rdfs:label "nuclease activity") -SubClassOf( ) - -# Class: (DNA nuclease activity) - -AnnotationAssertion(Annotation( "GOC:mah") Annotation( "ISBN:0198547684") "Catalysis of the hydrolysis of ester linkages within deoxyribonucleic acid.") -AnnotationAssertion(Annotation(rdfs:label "Cleavage of DNA by DFF40") "Reactome:R-HSA-211247") -AnnotationAssertion(Annotation(rdfs:label "Long-range resection of DNA DSBs by EXO1 or DNA2") "Reactome:R-HSA-5685994") -AnnotationAssertion(Annotation(rdfs:label "DNA nucleases unhook the interstrand crosslink (ICL)") "Reactome:R-HSA-6785986") -AnnotationAssertion(rdfs:label "DNA nuclease activity") -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (transporter activity) AnnotationAssertion(Annotation( "GOC:ai") Annotation( "GOC:dgf") "Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, accross or in between cells.") @@ -15206,6 +18864,17 @@ AnnotationAssertion(rdfs:label "amin EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (L-glutamate transmembrane transporter activity) + +AnnotationAssertion(Annotation( "GOC:ai") Annotation( "GOC:mtg_transport") Annotation( "ISBN:0815340729") "Enables the transfer of L-glutamate from one side of a membrane to the other. L-glutamate is the anion of 2-aminopentanedioic acid.") +AnnotationAssertion(Annotation(rdfs:label "L-Glutamate loading of synaptic vesicle") "Reactome:R-HSA-210444") +AnnotationAssertion(Annotation(rdfs:label "SLC17A6,7,8 exchange cytosolic L-Glu for synaptic vesicle H+") "Reactome:R-HSA-428052") +AnnotationAssertion(Annotation(rdfs:label "Defective SLC17A8 does not exchange cytosolic L-Glu for synaptic vesicle H+") "Reactome:R-HSA-5624256") +AnnotationAssertion(rdfs:label "L-glutamate transmembrane transporter activity") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (lipid transporter activity) AnnotationAssertion(Annotation( "GOC:ai") "Enables the directed movement of lipids into, out of or within a cell, or between cells.") @@ -15231,15 +18900,6 @@ AnnotationAssertion(rdfs:label "orga EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (glucose transmembrane transporter activity) - -AnnotationAssertion(Annotation( "GOC:ai") Annotation( "GOC:mtg_transport") Annotation( "ISBN:0815340729") "Enables the transfer of the hexose monosaccharide glucose from one side of a membrane to the other.") -AnnotationAssertion(Annotation(rdfs:label "Transport of Extracellular Glucose to the Cytosol by GLUT1 and GLUT2") "Reactome:R-HSA-499981") -AnnotationAssertion(Annotation(rdfs:label "SLC2A1 tetramer transports Glc from cytosol to Golgi lumen") "Reactome:R-HSA-5653873") -AnnotationAssertion(rdfs:label "glucose transmembrane transporter activity") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (cellular_component) AnnotationAssertion(Annotation( "GOC:pdt") "A location, relative to cellular compartments and structures, occupied by a macromolecular machine. There are three types of cellular components described in the gene ontology: (1) the cellular anatomical entity where a gene product carries out a molecular function (e.g., plasma membrane, cytoskeleton) or membrane-enclosed compartments (e.g., mitochondrion); (2) virion components, where viral proteins act, and (3) the stable macromolecular complexes of which gene product are parts (e.g., the clathrin complex).") @@ -15337,7 +18997,9 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectAllValuesFrom( )) DisjointClasses( ) +DisjointClasses( ) DisjointClasses( ObjectSomeValuesFrom( )) +DisjointClasses( ObjectSomeValuesFrom( )) # Class: (nuclear envelope) @@ -15458,6 +19120,17 @@ AnnotationAssertion(rdfs:comment "No AnnotationAssertion(rdfs:label "Golgi-associated vesicle") SubClassOf( ) +# Class: (cytosol) + +AnnotationAssertion(Annotation( "GOC:hjd") Annotation( "GOC:jl") "The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.") +AnnotationAssertion( "NIF_Subcellular:sao101633890") +AnnotationAssertion( "Wikipedia:Cytosol") +AnnotationAssertion(rdfs:label "cytosol") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +DisjointClasses( ObjectSomeValuesFrom( )) +DisjointClasses( ObjectSomeValuesFrom( )) + # Class: (ribosome) AnnotationAssertion(Annotation( "ISBN:0198506732") "An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.") @@ -15510,6 +19183,17 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (intermediate filament) + +AnnotationAssertion(Annotation( "ISBN:0198506732") Annotation( "PMID:17493611") Annotation( "PMID:17551517") Annotation( "PMID:7979242") "A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins.") +AnnotationAssertion( "FMA:63851") +AnnotationAssertion( "NIF_Subcellular:sao952483289") +AnnotationAssertion( "Wikipedia:Intermediate_filament") +AnnotationAssertion(rdfs:label "intermediate filament") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (actin filament) AnnotationAssertion(Annotation( "GOC:mah") Annotation( "ISBN:0198506732") Annotation( "PMID:10666339") "A filamentous structure formed of a two-stranded helical polymer of the protein actin and associated proteins. Actin filaments are a major component of the contractile apparatus of skeletal muscle and the microfilaments of the cytoskeleton of eukaryotic cells. The filaments, comprising polymerized globular actin molecules, appear as flexible structures with a diameter of 5-9 nm. They are organized into a variety of linear bundles, two-dimensional networks, and three dimensional gels. In the cytoskeleton they are most highly concentrated in the cortex of the cell just beneath the plasma membrane.") @@ -15628,13 +19312,8 @@ SubClassOf( (glycogen biosynthetic process) AnnotationAssertion(Annotation( "ISBN:0198506732") "The chemical reactions and pathways resulting in the formation of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues.") -AnnotationAssertion( "MetaCyc:GLYCOGENSYNTH-PWY") -AnnotationAssertion( "MetaCyc:PWY-5067") -AnnotationAssertion( "MetaCyc:PWY-7900") AnnotationAssertion(rdfs:label "glycogen biosynthetic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) # Class: (regulation of glycogen biosynthetic process) @@ -15647,9 +19326,6 @@ SubClassOf( (glycogen catabolic process) AnnotationAssertion(Annotation( "ISBN:0198506732") "The chemical reactions and pathways resulting in the breakdown of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues.") -AnnotationAssertion( "MetaCyc:GLYCOCAT-PWY") -AnnotationAssertion( "MetaCyc:PWY-5941") -AnnotationAssertion( "MetaCyc:PWY-7662") AnnotationAssertion(rdfs:label "glycogen catabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) @@ -15692,19 +19368,17 @@ AnnotationAssertion(Annotation( "organic acid metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ) # Class: (generation of precursor metabolites and energy) AnnotationAssertion(Annotation( "GOC:jl") "The chemical reactions and pathways resulting in the formation of precursor metabolites, substances from which energy is derived, and any process involved in the liberation of energy from these substances.") AnnotationAssertion(rdfs:label "generation of precursor metabolites and energy") -SubClassOf( ) +SubClassOf( ) # Class: (gluconeogenesis) AnnotationAssertion(Annotation( "MetaCyc:GLUCONEO-PWY") "The formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol.") -AnnotationAssertion( "MetaCyc:GLUCONEO-PWY") AnnotationAssertion( "Wikipedia:Gluconeogenesis") AnnotationAssertion(rdfs:label "gluconeogenesis") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) @@ -15728,34 +19402,6 @@ AnnotationAssertion(Annotation( "energy reserve metabolic process") SubClassOf( ) -# Class: (nucleobase-containing compound metabolic process) - -AnnotationAssertion(Annotation( "GOC:ai") "Any cellular metabolic process involving nucleobases, nucleosides, nucleotides and nucleic acids.") -AnnotationAssertion(rdfs:label "nucleobase-containing compound metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) - -# Class: (DNA metabolic process) - -AnnotationAssertion(Annotation( "ISBN:0198506732") "Any cellular metabolic process involving deoxyribonucleic acid. This is one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides.") -AnnotationAssertion(rdfs:label "DNA metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) - -# Class: (DNA catabolic process) - -AnnotationAssertion(Annotation( "GOC:go_curators") Annotation( "ISBN:0198506732") "The cellular DNA metabolic process resulting in the breakdown of DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long unbranched macromolecule formed from one or two strands of linked deoxyribonucleotides, the 3'-phosphate group of each constituent deoxyribonucleotide being joined in 3',5'-phosphodiester linkage to the 5'-hydroxyl group of the deoxyribose moiety of the next one.") -AnnotationAssertion(rdfs:label "DNA catabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (apoptotic DNA fragmentation) - -AnnotationAssertion(Annotation( "GOC:dph") Annotation( "GOC:mah") Annotation( "GOC:mtg_apoptosis") Annotation( "GOC:tb") Annotation( "ISBN:0721639976") Annotation( "PMID:15723341") Annotation( "PMID:23379520") "The cleavage of DNA during apoptosis, which usually occurs in two stages: cleavage into fragments of about 50 kbp followed by cleavage between nucleosomes to yield 200 bp fragments.") -AnnotationAssertion(rdfs:comment "DNA fragmentation in response to apoptotic signals is achieved through the activity of apoptotic nucleases. In human, these include DNA fragmentation factor (DFF) or caspase-activated DNase (CAD) and endonuclease G (Endo G) (reviewed in PMID:15723341). Caution is needed when apoptotic DNA laddering assays show presence of fragmented DNA. A positive assay may simply reflect the end point of a whole apoptotic process. Unless clear experimental evidence is available to show that a gene product is directly involved in fragmenting DNA, please do not annotate to GO:0006309 'apoptotic DNA fragmentation' and consider annotating instead to a more upstream process such as, e.g., GO:0042981 'regulation of apoptotic process', GO:0006915 'apoptotic process', GO:0097190 'apoptotic signaling pathway'. Also, note that gene products involved in compartmentalization of apoptotic nucleases and in activation or repression of their enzymatic activity should be annotated to the regulation term GO:1902510 'regulation of apoptotic DNA fragmentation' or to one of its children (see PMID:15723341).") -AnnotationAssertion(rdfs:label "apoptotic DNA fragmentation") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) - # Class: (chromatin organization) AnnotationAssertion(Annotation( "PMID:20404130") "The assembly or remodeling of chromatin composed of DNA complexed with histones, other associated proteins, and sometimes RNA.") @@ -15774,6 +19420,18 @@ AnnotationAssertion(Annotation( "RNA localization") SubClassOf( ) +# Class: (RNA import into nucleus) + +AnnotationAssertion(Annotation( "GOC:ma") "The import of RNA from the cytoplasm to the nucleus.") +AnnotationAssertion(rdfs:label "RNA import into nucleus") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) + +# Class: (RNA export from nucleus) + +AnnotationAssertion(Annotation( "GOC:ma") "The directed movement of RNA from the nucleus to the cytoplasm.") +AnnotationAssertion(rdfs:label "RNA export from nucleus") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) + # Class: (translation) AnnotationAssertion(Annotation( "GOC:go_curators") "The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.") @@ -15791,7 +19449,7 @@ SubClassOf( ObjectSomeValuesFrom( "ISBN:019879276X") "The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA or circRNA, and an initiation complex that contains the first aminoacyl-tRNA.") AnnotationAssertion(rdfs:label "translational initiation") -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -15850,6 +19508,42 @@ AnnotationAssertion(Annotation( "peptide metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +# Class: (amino acid metabolic process) + +AnnotationAssertion(Annotation( "ISBN:0198506732") "The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups.") +AnnotationAssertion(rdfs:label "amino acid metabolic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) + +# Class: (regulation of amino acid metabolic process) + +AnnotationAssertion(Annotation( "GOC:go_curators") "Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving amino acids.") +AnnotationAssertion(rdfs:label "regulation of amino acid metabolic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (glutamate metabolic process) + +AnnotationAssertion(Annotation( "GOC:go_curators") "The chemical reactions and pathways involving glutamate, the anion of 2-aminopentanedioic acid.") +AnnotationAssertion( "Wikipedia:Glutamic_acid") +AnnotationAssertion(rdfs:label "glutamate metabolic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) + +# Class: (glutamate biosynthetic process) + +AnnotationAssertion(Annotation( "GOC:go_curators") "The chemical reactions and pathways resulting in the formation of glutamate, the anion of 2-aminopentanedioic acid.") +AnnotationAssertion(rdfs:label "glutamate biosynthetic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) + +# Class: (glutamate catabolic process) + +AnnotationAssertion(Annotation( "GOC:go_curators") "The chemical reactions and pathways resulting in the breakdown of glutamate, the anion of 2-aminopentanedioic acid.") +AnnotationAssertion(rdfs:label "glutamate catabolic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) + # Class: (biogenic amine metabolic process) AnnotationAssertion(Annotation( "GOC:jl") Annotation( "ISBN:0395825172") "The chemical reactions and pathways occurring at the level of individual cells involving any of a group of naturally occurring, biologically active amines, such as norepinephrine, histamine, and serotonin, many of which act as neurotransmitters.") @@ -15864,6 +19558,18 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) +# Class: (protein import into nucleus) + +AnnotationAssertion(Annotation( "GOC:jl") "The directed movement of a protein from the cytoplasm to the nucleus.") +AnnotationAssertion(rdfs:label "protein import into nucleus") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) + +# Class: (protein export from nucleus) + +AnnotationAssertion(Annotation( "GOC:jl") "The directed movement of a protein from the nucleus into the cytoplasm.") +AnnotationAssertion(rdfs:label "protein export from nucleus") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) + # Class: (lipid metabolic process) AnnotationAssertion(Annotation( "GOC:ma") "The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.") @@ -15873,6 +19579,12 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) +# Class: (membrane lipid metabolic process) + +AnnotationAssertion(Annotation( "GOC:ai") "The chemical reactions and pathways involving membrane lipids, any lipid found in or associated with a biological membrane.") +AnnotationAssertion(rdfs:label "membrane lipid metabolic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) + # Class: (steroid biosynthetic process) AnnotationAssertion(Annotation( "GOC:go_curators") "The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification.") @@ -15913,6 +19625,20 @@ AnnotationAssertion(Annotation( "monoatomic ion transport") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +# Class: (dicarboxylic acid transport) + +AnnotationAssertion(Annotation( "GOC:krc") "The directed movement of dicarboxylic acids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.") +AnnotationAssertion(rdfs:label "dicarboxylic acid transport") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (neurotransmitter transport) + +AnnotationAssertion(Annotation( "GOC:ai") "The directed movement of a neurotransmitter into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell.") +AnnotationAssertion(rdfs:label "neurotransmitter transport") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectAllValuesFrom( )) + # Class: (serotonin transport) AnnotationAssertion(Annotation( "GOC:ai") "The directed movement of serotonin into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Serotonin (5-hydroxytryptamine) is a monoamine neurotransmitter occurring in the peripheral and central nervous systems.") @@ -15925,6 +19651,18 @@ AnnotationAssertion(Annotation( "extracellular transport") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +# Class: (extracellular amino acid transport) + +AnnotationAssertion(Annotation( "GOC:ai") "The directed extracellular movement of amino acids.") +AnnotationAssertion(rdfs:label "extracellular amino acid transport") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (amino acid transport) + +AnnotationAssertion(Annotation( "GOC:ai") "The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.") +AnnotationAssertion(rdfs:label "amino acid transport") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + # Class: (lipid transport) AnnotationAssertion(Annotation( "ISBN:0198506732") "The directed movement of lipids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent.") @@ -16024,6 +19762,14 @@ SubClassOf( ObjectComplementOf(Object SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) DisjointClasses( ObjectSomeValuesFrom( )) +# Class: (nucleocytoplasmic transport) + +AnnotationAssertion(Annotation( "GOC:go_curators") "The directed movement of molecules between the nucleus and the cytoplasm.") +AnnotationAssertion(rdfs:comment "Note that transport through the nuclear pore complex is not transmembrane because the nuclear membrane is a double membrane, and is not traversed.") +AnnotationAssertion(rdfs:label "nucleocytoplasmic transport") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) + # Class: (apoptotic process) AnnotationAssertion(Annotation( "GOC:cjm") Annotation( "GOC:dhl") Annotation( "GOC:ecd") Annotation( "GOC:go_curators") Annotation( "GOC:mtg_apoptosis") Annotation( "GOC:tb") Annotation( "ISBN:0198506732") Annotation( "PMID:18846107") Annotation( "PMID:21494263") "A programmed cell death process which begins when a cell receives an internal (e.g. DNA damage) or external signal (e.g. an extracellular death ligand), and proceeds through a series of biochemical events (signaling pathway phase) which trigger an execution phase. The execution phase is the last step of an apoptotic process, and is typically characterized by rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), plasma membrane blebbing and fragmentation of the cell into apoptotic bodies. When the execution phase is completed, the cell has died.") @@ -16116,7 +19862,6 @@ SubClassOf( (response to stress) AnnotationAssertion(Annotation( "GOC:mah") "Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation).") -AnnotationAssertion(rdfs:comment "Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC.") AnnotationAssertion(rdfs:label "response to stress") SubClassOf( ) @@ -16142,6 +19887,13 @@ AnnotationAssertion(rdfs:label "immu SubClassOf( ) SubClassOf( ) +# Class: (humoral immune response) + +AnnotationAssertion(Annotation( "GOC:hb") Annotation( "ISBN:0198506732") "An immune response mediated through a body fluid.") +AnnotationAssertion( "Wikipedia:Humoral_immunity") +AnnotationAssertion(rdfs:label "humoral immune response") +SubClassOf( ) + # Class: (organelle organization) AnnotationAssertion(Annotation( "GOC:mah") "A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an organelle within a cell. An organelle is an organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane.") @@ -16419,6 +20171,24 @@ SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (neurotransmitter secretion) + +AnnotationAssertion(Annotation( "GOC:dph") "The regulated release of neurotransmitter from the presynapse into the synaptic cleft via calcium-regulated exocytosis during synaptic transmission.") +AnnotationAssertion(rdfs:comment "A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin.") +AnnotationAssertion(rdfs:label "neurotransmitter secretion") +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (ensheathment of neurons) + +AnnotationAssertion(Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:tb") "The process in which glial cells envelop neuronal cell bodies and/or axons to form an insulating layer. This can take the form of myelinating or non-myelinating ensheathment.") +AnnotationAssertion(rdfs:label "ensheathment of neurons") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (multicellular organism development) AnnotationAssertion(Annotation( "GOC:dph") Annotation( "GOC:ems") Annotation( "GOC:isa_complete") Annotation( "GOC:tb") "The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult).") @@ -16435,7 +20205,16 @@ AnnotationAssertion(Annotation( "gamete generation") SubClassOf( ) SubClassOf( ) +SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) +SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) +SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) +SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) +SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) +DisjointClasses( ObjectSomeValuesFrom( )) +DisjointClasses( ObjectSomeValuesFrom( )) +DisjointClasses( ObjectSomeValuesFrom( )) # Class: (germ cell development) @@ -16565,6 +20344,16 @@ SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( )) SubClassOf( ObjectAllValuesFrom( )) +# Class: (axonogenesis) + +AnnotationAssertion(Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GOC:pg") Annotation( "GOC:pr") Annotation( "ISBN:0198506732") "De novo generation of a long process of a neuron, including the terminal branched region. Refers to the morphogenesis or creation of shape or form of the developing axon, which carries efferent (outgoing) action potentials from the cell body towards target cells.") +AnnotationAssertion(rdfs:comment "Note that 'axonogenesis' differs from 'axon development' in that the latter also covers other processes, such as axon regeneration (regrowth after loss or damage, not necessarily of the whole axon).") +AnnotationAssertion(rdfs:label "axonogenesis") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (synapse assembly) AnnotationAssertion(Annotation( "GOC:mah") "The aggregation, arrangement and bonding together of a set of components to form a synapse. This process ends when the synapse is mature (functional).") @@ -16668,6 +20457,7 @@ SubClassOf( ObjectSomeValuesFrom( (heart development) AnnotationAssertion(Annotation( "GOC:jid") Annotation( "UBERON:0000948") "The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood.") +AnnotationAssertion( ) AnnotationAssertion( "Wikipedia:Heart_development") AnnotationAssertion(rdfs:label "heart development") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) @@ -16775,6 +20565,13 @@ AnnotationAssertion(Annotation( "sensory perception of chemical stimulus") SubClassOf( ) +# Class: (sensory perception of smell) + +AnnotationAssertion(Annotation( "GOC:ai") "The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors. This is a neurological process.") +AnnotationAssertion( "Wikipedia:Olfaction") +AnnotationAssertion(rdfs:label "sensory perception of smell") +SubClassOf( ) + # Class: (behavior) AnnotationAssertion(Annotation( "GOC:ems") Annotation( "GOC:jl") Annotation( "ISBN:0395448956") Annotation( "PMID:20160973") "The internally coordinated responses (actions or inactions) of animals (individuals or groups) to internal or external stimuli, via a mechanism that involves nervous system activity.") @@ -16788,6 +20585,21 @@ SubClassOf( ObjectSomeValuesFrom( ObjectAllValuesFrom( )) DisjointClasses( ) +# Class: (learning or memory) + +AnnotationAssertion(Annotation( "GOC:jid") Annotation( "PMID:8938125") "The acquisition and processing of information and/or the storage and retrieval of this information over time.") +AnnotationAssertion(rdfs:label "learning or memory") +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) + +# Class: (memory) + +AnnotationAssertion(Annotation( "GOC:curators") Annotation( "ISBN:0582227089") "The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task).") +AnnotationAssertion( "Wikipedia:Memory") +AnnotationAssertion(rdfs:label "memory") +SubClassOf( ) + # Class: (locomotory behavior) AnnotationAssertion(Annotation( "GOC:dph") "The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions.") @@ -16821,6 +20633,20 @@ AnnotationAssertion( "axo-dendritic transport") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectAllValuesFrom( )) + +# Class: (anterograde axonal transport) + +AnnotationAssertion(Annotation( "ISBN:0815316194") "The directed movement of organelles or molecules along microtubules from the cell body toward the cell periphery in nerve cell axons.") +AnnotationAssertion(rdfs:label "anterograde axonal transport") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) + +# Class: (retrograde axonal transport) + +AnnotationAssertion(Annotation( "ISBN:0815316194") "The directed movement of organelles or molecules along microtubules from the cell periphery toward the cell body in nerve cell axons.") +AnnotationAssertion(rdfs:label "retrograde axonal transport") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) # Class: (protein localization) @@ -16840,11 +20666,11 @@ SubClassOf( (metabolic process) -AnnotationAssertion(Annotation( "GOC:go_curators") Annotation( "ISBN:0198547684") "The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.") +AnnotationAssertion(Annotation( "GOC:go_curators") Annotation( "ISBN:0198547684") "A cellular process consisting of the biochemical pathways by which a living organism transforms chemical substances. This includes including anabolism (biosynthetic process) and catabolism (catabolic process). Metabolic processes includes the transformation of small molecules, as well macromolecular processes such as DNA repair and replication, protein synthesis and degradation.") AnnotationAssertion( "Wikipedia:Metabolism") AnnotationAssertion(rdfs:comment "Note that metabolic processes do not include single functions or processes such as protein-protein interactions, protein-nucleic acids, nor receptor-ligand interactions.") AnnotationAssertion(rdfs:label "metabolic process") -SubClassOf( ) +SubClassOf( ) DisjointClasses( ) # Class: (steroid metabolic process) @@ -16940,6 +20766,12 @@ SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( )) SubClassOf( ObjectAllValuesFrom( )) +# Class: (negative regulation of antimicrobial humoral response) + +AnnotationAssertion(Annotation( "GOC:go_curators") "Any process that stops, prevents, or reduces the frequency, rate, or extent of an antimicrobial humoral response.") +AnnotationAssertion(rdfs:label "negative regulation of antimicrobial humoral response") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + # Class: (germ cell migration) AnnotationAssertion(Annotation( "GOC:bf") Annotation( "GOC:jl") "The orderly movement of a cell specialized to produce haploid gametes through the embryo from its site of production to the place where the gonads will form.") @@ -16955,6 +20787,13 @@ AnnotationAssertion( "asymmetric cell division") SubClassOf( ) +# Class: (axon ensheathment) + +AnnotationAssertion(Annotation( "GOC:jl") Annotation( "ISBN:0878932437") "Any process in which the axon of a neuron is insulated, and that insulation maintained, thereby preventing dispersion of the electrical signal.") +AnnotationAssertion(rdfs:label "axon ensheathment") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (gonad development) AnnotationAssertion(Annotation( "GOC:ems") Annotation( "ISBN:0198506732") "The process whose specific outcome is the progression of the gonad over time, from its formation to the mature structure. The gonad is an animal organ that produces gametes; in some species it also produces hormones.") @@ -17015,9 +20854,16 @@ AnnotationAssertion(rdfs:comment "No AnnotationAssertion(rdfs:label "hexose transmembrane transport") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +# Class: (amino acid biosynthetic process) + +AnnotationAssertion(Annotation( "ISBN:0198506732") "The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents.") +AnnotationAssertion( "Wikipedia:Amino_acid_synthesis") +AnnotationAssertion(rdfs:label "amino acid biosynthetic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + # Class: (catabolic process) -AnnotationAssertion(Annotation( "ISBN:0198547684") "The chemical reactions and pathways resulting in the breakdown of substances, including the breakdown of carbon compounds with the liberation of energy for use by the cell or organism.") +AnnotationAssertion(Annotation( "ISBN:0198547684") "A cellular process consisting of the biochemical pathways by which a living organism breaks down substances. This includes the breakdown of carbon compounds with the liberation of energy for use by the cell or organism.") AnnotationAssertion( "Wikipedia:Catabolism") AnnotationAssertion(rdfs:label "catabolic process") SubClassOf( ) @@ -17030,7 +20876,7 @@ EquivalentClasses( ObjectIntersection # Class: (biosynthetic process) -AnnotationAssertion(Annotation( "GOC:curators") Annotation( "ISBN:0198547684") "The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.") +AnnotationAssertion(Annotation( "GOC:curators") Annotation( "ISBN:0198547684") "A cellular process consisting of the biochemical pathways by which a living organism synthesizes chemical substances. This typically represents the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.") AnnotationAssertion( "Wikipedia:Anabolism") AnnotationAssertion(rdfs:label "biosynthetic process") SubClassOf( ) @@ -17042,7 +20888,33 @@ AnnotationAssertion(rdfs:comment "No AnnotationAssertion(rdfs:label "macromolecule biosynthetic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) + +# Class: (amino acid catabolic process) + +AnnotationAssertion(Annotation( "GOC:ai") "The chemical reactions and pathways resulting in the breakdown of amino acids, organic acids containing one or more amino substituents.") +AnnotationAssertion(rdfs:label "amino acid catabolic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (glutamine family amino acid metabolic process) + +AnnotationAssertion(Annotation( "GOC:ai") "The chemical reactions and pathways involving amino acids of the glutamine family, comprising arginine, glutamate, glutamine and proline.") +AnnotationAssertion(rdfs:label "glutamine family amino acid metabolic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) + +# Class: (glutamine family amino acid catabolic process) + +AnnotationAssertion(Annotation( "GOC:ai") "The chemical reactions and pathways resulting in the breakdown of amino acids of the glutamine family, comprising arginine, glutamate, glutamine and proline.") +AnnotationAssertion(rdfs:label "glutamine family amino acid catabolic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) + +# Class: (glutamine family amino acid biosynthetic process) + +AnnotationAssertion(Annotation( "GOC:ai") "The chemical reactions and pathways resulting in the formation of amino acids of the glutamine family, comprising arginine, glutamate, glutamine and proline.") +AnnotationAssertion(rdfs:label "glutamine family amino acid biosynthetic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) # Class: (glycoprotein metabolic process) @@ -17112,6 +20984,30 @@ AnnotationAssertion(rdfs:label "resp EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +# Class: (gamma-aminobutyric acid metabolic process) + +AnnotationAssertion(Annotation( "ISBN:0198506732") "The chemical reactions and pathways involving gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms.") +AnnotationAssertion(rdfs:comment "See also the biological process term 'neurotransmitter metabolic process ; GO:0042133'.") +AnnotationAssertion(rdfs:label "gamma-aminobutyric acid metabolic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) + +# Class: (gamma-aminobutyric acid biosynthetic process) + +AnnotationAssertion(Annotation( "GOC:ai") "The chemical reactions and pathways resulting in the formation of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms.") +AnnotationAssertion(rdfs:comment "See also the biological process term 'neurotransmitter biosynthetic process ; GO:0042136'.") +AnnotationAssertion(rdfs:label "gamma-aminobutyric acid biosynthetic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (gamma-aminobutyric acid catabolic process) + +AnnotationAssertion(Annotation( "GOC:ai") "The chemical reactions and pathways resulting in the breakdown of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms.") +AnnotationAssertion( "MetaCyc:4AMINOBUTMETAB-PWY") +AnnotationAssertion(rdfs:comment "See also the biological process term 'neurotransmitter catabolic process ; GO:0042135'.") +AnnotationAssertion(rdfs:label "gamma-aminobutyric acid catabolic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + # Class: (fertilization) AnnotationAssertion(Annotation( "GOC:tb") Annotation( "ISBN:0198506732") "The union of gametes of opposite sexes during the process of sexual reproduction to form a zygote. It involves the fusion of the gametic nuclei (karyogamy) and cytoplasm (plasmogamy).") @@ -17169,6 +21065,13 @@ AnnotationAssertion(rdfs:comment "No AnnotationAssertion(rdfs:label "response to biotic stimulus") SubClassOf( ) +# Class: (response to mechanical stimulus) + +AnnotationAssertion(Annotation( "GOC:hb") "Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a mechanical stimulus.") +AnnotationAssertion(rdfs:label "response to mechanical stimulus") +SubClassOf( ) +SubClassOf( ) + # Class: (response to bacterium) AnnotationAssertion(Annotation( "GOC:hb") "Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a bacterium.") @@ -17501,14 +21404,6 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) -# Class: (response to organonitrogen compound) - -AnnotationAssertion(Annotation( "PMID:9869419") "Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an organonitrogen stimulus. An organonitrogen compound is formally a compound containing at least one carbon-nitrogen bond.") -AnnotationAssertion(rdfs:comment "Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC.") -AnnotationAssertion(rdfs:label "response to organonitrogen compound") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) - # Class: (endomembrane system organization) AnnotationAssertion(Annotation( "GOC:mah") Annotation( "GOC:sm") "A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the endomembrane system.") @@ -17656,20 +21551,19 @@ AnnotationAssertion(rdfs:label "regu EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -# Class: (regulation of cellular ketone metabolic process) +# Class: (regulation of ketone metabolic process) AnnotationAssertion(Annotation( "GOC:dph") Annotation( "GOC:tb") "Any process that modulates the chemical reactions and pathways involving any of a class of organic compounds that contain the carbonyl group, CO, and in which the carbonyl group is bonded only to carbon atoms. The general formula for a ketone is RCOR, where R and R are alkyl or aryl groups.") -AnnotationAssertion(rdfs:label "regulation of cellular ketone metabolic process") +AnnotationAssertion(rdfs:label "regulation of ketone metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) # Class: (regulation of ketone biosynthetic process) AnnotationAssertion(Annotation( "GOC:dph") Annotation( "GOC:tb") "Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of a ketone, carried out by individual cells.") AnnotationAssertion(rdfs:label "regulation of ketone biosynthetic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) SubClassOf( ) -SubClassOf( ) # Class: (regulation of ketone catabolic process) @@ -17763,6 +21657,24 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) +# Class: (regulation of Schwann cell proliferation) + +AnnotationAssertion(Annotation( "GOC:dph") Annotation( "GOC:sl") Annotation( "GOC:tb") "Any process that modulates the frequency or rate of multiplication or reproduction of Schwann cells, resulting in the expansion of their population. Schwann cells are a type of glial cell in the peripheral nervous system.") +AnnotationAssertion(rdfs:label "regulation of Schwann cell proliferation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (positive regulation of Schwann cell proliferation) + +AnnotationAssertion(Annotation( "GOC:dph") Annotation( "GOC:sl") Annotation( "GOC:tb") "Any process that increases the frequency or rate of the multiplication or reproduction of Schwann cells, resulting in the expansion of their population. Schwann cells are a type of glial cell in the peripheral nervous system.") +AnnotationAssertion(rdfs:label "positive regulation of Schwann cell proliferation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (negative regulation of Schwann cell proliferation) + +AnnotationAssertion(Annotation( "GOC:dph") Annotation( "GOC:sl") Annotation( "GOC:tb") "Any process that decreases the frequency or extent of the multiplication or reproduction of Schwann cells, resulting in the expansion of their population. Schwann cells are a type of glial cell in the peripheral nervous system.") +AnnotationAssertion(rdfs:label "negative regulation of Schwann cell proliferation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + # Class: (positive regulation of gene expression) AnnotationAssertion(Annotation( "GOC:txnOH-2018") "Any process that increases the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product (protein or RNA).") @@ -18105,22 +22017,22 @@ AnnotationAssertion(Annotation( "positive regulation of T cell chemotaxis") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -# Class: (regulation of glucose transmembrane transport) +# Class: (regulation of D-glucose transmembrane transport) AnnotationAssertion(Annotation( "GOC:dph") Annotation( "GOC:tb") "Any process that modulates the frequency, rate or extent of glucose transport across a membrane. Glucose transport is the directed movement of the hexose monosaccharide glucose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.") -AnnotationAssertion(rdfs:label "regulation of glucose transmembrane transport") +AnnotationAssertion(rdfs:label "regulation of D-glucose transmembrane transport") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -# Class: (positive regulation of glucose transmembrane transport) +# Class: (positive regulation of D-glucose transmembrane transport) AnnotationAssertion(Annotation( "GOC:BHF") Annotation( "GOC:dph") Annotation( "GOC:tb") "Any process that increases the frequency, rate or extent of glucose transport across a membrane. Glucose transport is the directed movement of the hexose monosaccharide glucose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.") -AnnotationAssertion(rdfs:label "positive regulation of glucose transmembrane transport") +AnnotationAssertion(rdfs:label "positive regulation of D-glucose transmembrane transport") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -# Class: (negative regulation of glucose transmembrane transport) +# Class: (negative regulation of D-glucose transmembrane transport) AnnotationAssertion(Annotation( "GOC:BHF") Annotation( "GOC:dph") Annotation( "GOC:tb") "Any process that decreases the frequency, rate or extent of glucose transport across a membrane. Glucose transport is the directed movement of the hexose monosaccharide glucose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.") -AnnotationAssertion(rdfs:label "negative regulation of glucose transmembrane transport") +AnnotationAssertion(rdfs:label "negative regulation of D-glucose transmembrane transport") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) # Class: (regulation of myotube differentiation) @@ -18141,6 +22053,29 @@ AnnotationAssertion(Annotation( "negative regulation of myotube differentiation") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +# Class: (regulation of keratinocyte proliferation) + +AnnotationAssertion(Annotation( "GOC:dph") Annotation( "GOC:tb") "Any process that modulates the rate, frequency or extent of keratinocyte proliferation. Keratinocyte proliferation is the multiplication or reproduction of keratinocytes, resulting in the expansion of a cell population.") +AnnotationAssertion(rdfs:label "regulation of keratinocyte proliferation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) + +# Class: (positive regulation of keratinocyte proliferation) + +AnnotationAssertion(Annotation( "GOC:dph") Annotation( "GOC:tb") "Any process that increases the rate, frequency or extent of keratinocyte proliferation. Keratinocyte proliferation is the multiplication or reproduction of keratinocytes, resulting in the expansion of a cell population.") +AnnotationAssertion(rdfs:label "positive regulation of keratinocyte proliferation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) + +# Class: (negative regulation of keratinocyte proliferation) + +AnnotationAssertion(Annotation( "GOC:dph") Annotation( "GOC:tb") "Any process that decreases the rate, frequency or extent of keratinocyte proliferation. Keratinocyte proliferation is the multiplication or reproduction of keratinocytes, resulting in the expansion of a cell population.") +AnnotationAssertion(rdfs:label "negative regulation of keratinocyte proliferation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) + # Class: (retina layer formation) AnnotationAssertion(Annotation( "GOC:ascb_2009") Annotation( "GOC:dph") Annotation( "GOC:tb") Annotation( "PMID:1270266") "The process in which the vertebrate retina is organized into three laminae: the outer nuclear layer (ONL), which contains photoreceptor nuclei; the inner nuclear layer (INL), which contains amacrine, bipolar and horizontal cells; and the retinal ganglion cell (RGC) layer. Between the inner and outer nuclear layers, the outer plexiform layer (OPL) contains connections between the photoreceptors and bipolar and horizontal cells. The inner plexiform layer (IPL) is positioned between the INL and the ganglion cell layer and contains the dendrites of RGCs and processes of bipolar and amacrine cells. Spanning all layers of the retina are the radially oriented Mueller glia.") @@ -18240,6 +22175,12 @@ AnnotationAssertion(rdfs:label "nega EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +# Class: (regulation of amino acid import across plasma membrane) + +AnnotationAssertion(Annotation( "GOC:dph") Annotation( "GOC:tb") "Any process that modulates the frequency, rate or extent of amino acid import into a cell.") +AnnotationAssertion(rdfs:label "regulation of amino acid import across plasma membrane") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + # Class: (regulation of glucan biosynthetic process) AnnotationAssertion(Annotation( "GOC:dph") Annotation( "GOC:tb") "Any process that modulates the rate, frequency, or extent of glucan biosynthesis. Glucan biosynthetic processes are the chemical reactions and pathways resulting in the formation of glucans, polysaccharides consisting only of glucose residues.") @@ -18308,6 +22249,14 @@ AnnotationAssertion( "vesicle membrane") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +# Class: (oligodendrocyte development) + +AnnotationAssertion(Annotation( "GOC:dgh") Annotation( "GOC:ef") "The process aimed at the progression of an oligodendrocyte over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. An oligodendrocyte is a type of glial cell involved in myelinating the axons in the central nervous system.") +AnnotationAssertion(rdfs:label "oligodendrocyte development") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (glial cell proliferation) AnnotationAssertion(Annotation( "GOC:ef") Annotation( "ISBN:0878932585") "The multiplication or reproduction of glial cells by cell division, resulting in the expansion of their population. Glial cells exist throughout the nervous system, and include Schwann cells, astrocytes, and oligodendrocytes among others.") @@ -18316,6 +22265,13 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (Schwann cell proliferation) + +AnnotationAssertion(Annotation( "GOC:ef") Annotation( "ISBN:0878932585") "The multiplication or reproduction of Schwann cells, resulting in the expansion of their population. Schwann cells are a type of glial cell in the peripheral nervous system.") +AnnotationAssertion(rdfs:label "Schwann cell proliferation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) + # Class: (regulation of gliogenesis) AnnotationAssertion(Annotation( "GOC:ef") "Any process that modulates the frequency, rate or extent of gliogenesis, the formation of mature glia.") @@ -18414,6 +22370,32 @@ AnnotationAssertion(rdfs:label "neur EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +# Class: (Schwann cell differentiation) + +AnnotationAssertion(Annotation( "GOC:ef") "The process in which a relatively unspecialized cell acquires the specialized features of a Schwann cell. Schwann cells are found in the peripheral nervous system, where they insulate neurons and axons, and regulate the environment in which neurons function.") +AnnotationAssertion(rdfs:label "Schwann cell differentiation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (regulation of Schwann cell differentiation) + +AnnotationAssertion(Annotation( "GOC:ef") "Any process that modulates the frequency, rate or extent of Schwann cell differentiation.") +AnnotationAssertion(rdfs:label "regulation of Schwann cell differentiation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (negative regulation of Schwann cell differentiation) + +AnnotationAssertion(Annotation( "GOC:ef") "Any process that stops, prevents, or reduces the frequency, rate or extent of Schwann cell differentiation.") +AnnotationAssertion(rdfs:label "negative regulation of Schwann cell differentiation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (positive regulation of Schwann cell differentiation) + +AnnotationAssertion(Annotation( "GOC:ef") "Any process that activates or increases the frequency, rate or extent of Schwann cell differentiation.") +AnnotationAssertion(rdfs:label "positive regulation of Schwann cell differentiation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + # Class: (regulation of neuron maturation) AnnotationAssertion(Annotation( "GOC:ef") "Any process that modulates the frequency, rate or extent of neuron maturation, the process leading to the attainment of the full functional capacity of a neuron. This process is independent of morphogenetic change.") @@ -18433,6 +22415,65 @@ AnnotationAssertion(Annotation( "negative regulation of neuron maturation") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +# Class: (Schwann cell development) + +AnnotationAssertion(Annotation( "GOC:dgh") Annotation( "GOC:ef") "The process aimed at the progression of a Schwann cell over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. Schwann cells are found in the peripheral nervous system, where they insulate neurons and axons, and regulate the environment in which neurons function.") +AnnotationAssertion(rdfs:label "Schwann cell development") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (glutamate secretion) + +AnnotationAssertion(Annotation( "GOC:ef") "The controlled release of glutamate by a cell. The glutamate is the most abundant excitatory neurotransmitter in the nervous system.") +AnnotationAssertion(rdfs:label "glutamate secretion") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) + +# Class: (regulation of glutamate secretion) + +AnnotationAssertion(Annotation( "GOC:ef") "Any process that modulates the frequency, rate or extent of the controlled release of glutamate.") +AnnotationAssertion(rdfs:label "regulation of glutamate secretion") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (positive regulation of glutamate secretion) + +AnnotationAssertion(Annotation( "GOC:ef") "Any process that activates or increases the frequency, rate or extent of the controlled release of glutamate.") +AnnotationAssertion(rdfs:label "positive regulation of glutamate secretion") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (negative regulation of glutamate secretion) + +AnnotationAssertion(Annotation( "GOC:ef") "Any process that stops, prevents, or reduces the frequency, rate or extent of the controlled release of glutamate.") +AnnotationAssertion(rdfs:label "negative regulation of glutamate secretion") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (gamma-aminobutyric acid secretion) + +AnnotationAssertion(Annotation( "GOC:ef") "The regulated release of gamma-aminobutyric acid by a cell or a tissue. The gamma-aminobutyric acid is the principal inhibitory neurotransmitter in the brain but is also found in several extraneural tissues.") +AnnotationAssertion(rdfs:label "gamma-aminobutyric acid secretion") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) + +# Class: (regulation of gamma-aminobutyric acid secretion) + +AnnotationAssertion(Annotation( "GOC:ef") "Any process that modulates the frequency, rate or extent of the regulated release of gamma-aminobutyric acid.") +AnnotationAssertion(rdfs:label "regulation of gamma-aminobutyric acid secretion") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (negative regulation of gamma-aminobutyric acid secretion) + +AnnotationAssertion(Annotation( "GOC:ef") "Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of gamma-aminobutyric acid.") +AnnotationAssertion(rdfs:label "negative regulation of gamma-aminobutyric acid secretion") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (positive regulation of gamma-aminobutyric acid secretion) + +AnnotationAssertion(Annotation( "GOC:ef") "Any process that activates or increases the frequency, rate or extent of the regulated release of gamma-aminobutyric acid.") +AnnotationAssertion(rdfs:label "positive regulation of gamma-aminobutyric acid secretion") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + # Class: (regulation of norepinephrine secretion) AnnotationAssertion(Annotation( "GOC:ef") "Any process that modulates the frequency, rate or extent of the regulated release of norepinephrine.") @@ -18571,6 +22612,12 @@ AnnotationAssertion(Annotation( "gastro-intestinal system smooth muscle contraction") SubClassOf( ) +# Class: (regulation of skeletal muscle contraction by neural stimulation via neuromuscular junction) + +AnnotationAssertion(Annotation( "GOC:ef") Annotation( "GOC:mtg_muscle") "Any process that modulates the frequency, rate or extent of skeletal muscle contraction by variation of the pattern of stimulation by nervous system.") +AnnotationAssertion(rdfs:label "regulation of skeletal muscle contraction by neural stimulation via neuromuscular junction") +SubClassOf( ) + # Class: (striated muscle cell proliferation) AnnotationAssertion(Annotation( "CL:0000737") Annotation( "GOC:ef") Annotation( "GOC:mtg_muscle") "The multiplication or reproduction of striated muscle cells, resulting in the expansion of a cell population. Striated muscles contain fibers that are divided by transverse bands into striations, and cardiac and skeletal muscle are types of striated muscle.") @@ -18603,6 +22650,13 @@ AnnotationAssertion(Annotation( "negative regulation of skeletal muscle cell proliferation") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +# Class: (neurotransmitter secretion involved in regulation of skeletal muscle contraction) + +AnnotationAssertion(Annotation( "GOC:dph") Annotation( "GOC:mtg_muscle") Annotation( "GOC:tb") "The regulated release of neurotransmitter into the synaptic cleft involved in skeletal muscle contraction. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin.") +AnnotationAssertion(rdfs:label "neurotransmitter secretion involved in regulation of skeletal muscle contraction") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (regulation of skeletal muscle contraction via regulation of action potential) AnnotationAssertion(Annotation( "GOC:BHF") Annotation( "GOC:mtg_cardiac_conduct_nov11") Annotation( "GOC:mtg_muscle") "Any process that modulates the frequency, rate or extent of skeletal muscle contraction by depolarization of muscle membrane and ionic fluxes.") @@ -18722,12 +22776,10 @@ SubClassOf( ObjectSomeValuesFrom( (bicarbonate transmembrane transporter activity) AnnotationAssertion(Annotation( "GOC:ai") "Enables the transfer of bicarbonate from one side of a membrane to the other. Bicarbonate is the hydrogencarbonate ion, HCO3-.") -AnnotationAssertion( "RHEA:28695") AnnotationAssertion(Annotation(rdfs:label "BESTs transport cytosolic HCO3- to extracellular region") "Reactome:R-HSA-2752067") AnnotationAssertion(rdfs:label "bicarbonate transmembrane transporter activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (bile acid transmembrane transporter activity) @@ -18765,6 +22817,74 @@ AnnotationAssertion(rdfs:label "poly EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (amino acid transmembrane transporter activity) + +AnnotationAssertion(Annotation( "GOC:ai") Annotation( "GOC:mtg_transport") Annotation( "ISBN:0815340729") "Enables the transfer of amino acids from one side of a membrane to the other. Amino acids are organic molecules that contain an amino group and a carboxyl group.") +AnnotationAssertion(Annotation(rdfs:label "glutamate uptake by astrocytes") "Reactome:R-HSA-210439") +AnnotationAssertion(Annotation(rdfs:label "L-Glutamine transport into neurons") "Reactome:R-HSA-212642") +AnnotationAssertion(Annotation(rdfs:label "SLC6A18 transports Gly from extracellular region to cytosol") "Reactome:R-HSA-351963") +AnnotationAssertion(Annotation(rdfs:label "SLC6A6-mediated uptake of taurine and beta-alanine") "Reactome:R-HSA-351987") +AnnotationAssertion(Annotation(rdfs:label "SLC6A12 (BGT-1)-mediated uptake of GABA and betaine") "Reactome:R-HSA-352029") +AnnotationAssertion(Annotation(rdfs:label "SLC6A20 cotransports L-Pro, Na+ from the extracellular region to cytosol") "Reactome:R-HSA-352052") +AnnotationAssertion(Annotation(rdfs:label "SLC6A15-mediated amino acid uptake") "Reactome:R-HSA-352059") +AnnotationAssertion(Annotation(rdfs:label "SLC43A1 (LAT3)-mediated uptake of large neutral amino acids") "Reactome:R-HSA-352103") +AnnotationAssertion(Annotation(rdfs:label "SLC43A2 (LAT4)-mediated uptake of large neutral amino acids") "Reactome:R-HSA-352107") +AnnotationAssertion(Annotation(rdfs:label "SLC38A2 (ATA2)-mediated uptake of neutral amino acids") "Reactome:R-HSA-352108") +AnnotationAssertion(Annotation(rdfs:label "SLC38A1 (ATA1)-mediated uptake of neutral amino acids") "Reactome:R-HSA-352119") +AnnotationAssertion(Annotation(rdfs:label "SLC38A4 (ATA3)-mediated uptake of arginine and lysine") "Reactome:R-HSA-352136") +AnnotationAssertion(Annotation(rdfs:label "SLC16A10-mediated uptake of aromatic amino acids") "Reactome:R-HSA-352158") +AnnotationAssertion(Annotation(rdfs:label "SLC38A3-mediated uptake of glutamine, histidine, asparagine, and alanine") "Reactome:R-HSA-352174") +AnnotationAssertion(Annotation(rdfs:label "SLC38A5-mediated uptake of glutamine, histidine, asparagine, and serine") "Reactome:R-HSA-352182") +AnnotationAssertion(Annotation(rdfs:label "SLC7A8-mediated uptake of neutral amino acids") "Reactome:R-HSA-352191") +AnnotationAssertion(Annotation(rdfs:label "SLC7A5:SLC3A2 transports neutral amino acids from extracellular region to cytosol") "Reactome:R-HSA-352232") +AnnotationAssertion(Annotation(rdfs:label "SLC1A4-mediated exchange of extracellular serine for cytosolic alanine, threonine, or cysteine") "Reactome:R-HSA-352347") +AnnotationAssertion(Annotation(rdfs:label "SLC1A4-mediated exchange of extracellular cysteine for cytosolic alanine, serine, or threonine") "Reactome:R-HSA-352354") +AnnotationAssertion(Annotation(rdfs:label "SLC1A4-mediated exchange of extracellular alanine for cytosolic serine, threonine, or cysteine") "Reactome:R-HSA-352364") +AnnotationAssertion(Annotation(rdfs:label "SLC1A4-mediated exchange of extracellular threonine for cytosolic alanine, serine, or cysteine") "Reactome:R-HSA-352371") +AnnotationAssertion(Annotation(rdfs:label "SLC1A5-mediated exchange of alanine and glutamine across the plasma membrane") "Reactome:R-HSA-352379") +AnnotationAssertion(Annotation(rdfs:label "SLC1A5-mediated exchange of glutamine and alanine across the plasma membrane") "Reactome:R-HSA-352385") +AnnotationAssertion(Annotation(rdfs:label "SLC36A2 cotransports Gly, L-Pro with H+ from extracellular region to cytosol") "Reactome:R-HSA-375405") +AnnotationAssertion(Annotation(rdfs:label "SLC36A1-mediated uptake of glycine, proline, and alanine") "Reactome:R-HSA-375417") +AnnotationAssertion(Annotation(rdfs:label "SLC6A19 cotransports neutral amino acids, Na+ from extracellular region to cytosol") "Reactome:R-HSA-375473") +AnnotationAssertion(Annotation(rdfs:label "SLC6A14 cotransports SLC6A14 ligands, Cl-, 2Na+ from extracellular region to cytosol") "Reactome:R-HSA-375487") +AnnotationAssertion(Annotation(rdfs:label "SLC7A2, isoform B (CAT-2B)-mediated uptake of cationic amino acids") "Reactome:R-HSA-375768") +AnnotationAssertion(Annotation(rdfs:label "SLC7A3 (CAT-3)-mediated uptake of cationic amino acids") "Reactome:R-HSA-375770") +AnnotationAssertion(Annotation(rdfs:label "SLC7A1 (CAT-1)-mediated uptake of cationic amino acids") "Reactome:R-HSA-375776") +AnnotationAssertion(Annotation(rdfs:label "SLC7A2, isoform A (CAT-2A)-mediated uptake of cationic amino acids") "Reactome:R-HSA-375790") +AnnotationAssertion(Annotation(rdfs:label "SLC7A10-mediated uptake of small neutral amino acids") "Reactome:R-HSA-376200") +AnnotationAssertion(Annotation(rdfs:label "SLC7A11-mediated exchange of extracellular cysteine and cytosolic glutamate") "Reactome:R-HSA-378513") +AnnotationAssertion(Annotation(rdfs:label "SLC7A7:SLC3A2 exchanges L-Arg for L-Leu, Na+ across the plasma membrane") "Reactome:R-HSA-379415") +AnnotationAssertion(Annotation(rdfs:label "SLC7A6 (y+LAT2)-mediated exchange of extracellular leucine for cytosolic arginine") "Reactome:R-HSA-379426") +AnnotationAssertion(Annotation(rdfs:label "SLC7A9:SLC3A1 exchanges L-Arg, CySS-, L-Lys for L-Leu") "Reactome:R-HSA-379432") +AnnotationAssertion(Annotation(rdfs:label "Defective SLC36A2 does not cotransport Gly, L-Pro with H+ from extracellular region to cytosol") "Reactome:R-HSA-5653850") +AnnotationAssertion(Annotation(rdfs:label "Defective SLC3A1 (in SLC7A9:SLC3A1) does not exchange L-Arg, CySS-, L-Lys for L-Leu") "Reactome:R-HSA-5655702") +AnnotationAssertion(Annotation(rdfs:label "Variant SLC6A14 cotransports SLC6A14 ligands, Cl-, 2Na+ from extracellular region to cytosol") "Reactome:R-HSA-5659674") +AnnotationAssertion(Annotation(rdfs:label "Defective SLC6A19 does not cotransport neutral amino acids, Na+ from extracellular region to cytosol") "Reactome:R-HSA-5659734") +AnnotationAssertion(Annotation(rdfs:label "Defective SLC6A18 does not transport Gly from extracellular region to cytosol") "Reactome:R-HSA-5659755") +AnnotationAssertion(Annotation(rdfs:label "Variant SLC6A20 does not cotransport L-Pro, Na+ from extracellulare region to cytosol") "Reactome:R-HSA-5660694") +AnnotationAssertion(Annotation(rdfs:label "Defective SLC7A9 (in SLC7A9:SLC3A1) does not exchange L-Arg, CySS-, L-Lys for L-Leu") "Reactome:R-HSA-5660890") +AnnotationAssertion(Annotation(rdfs:label "Defective SLC7A7 does not exchange L-Arg for L-Leu, Na+ across the plasma membrane") "Reactome:R-HSA-5660910") +AnnotationAssertion(Annotation(rdfs:label "Loading of GABA into clathrin sculpted GABA transport vesicle lumen") "Reactome:R-HSA-888592") +AnnotationAssertion(Annotation(rdfs:label "SLC38A9 transports L-Arg from lysosomal lumen to cytosol") "Reactome:R-HSA-8952726") +AnnotationAssertion(rdfs:label "amino acid transmembrane transporter activity") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (acidic amino acid transmembrane transporter activity) + +AnnotationAssertion(Annotation( "GOC:ai") Annotation( "GOC:mtg_transport") Annotation( "ISBN:0815340729") "Enables the transfer of acidic amino acids from one side of a membrane to the other. Acidic amino acids have side chains with a negative charge at pH 7.3.") +AnnotationAssertion(Annotation(rdfs:label "SLC25A12,13 exchange L-Glu and L-Asp") "Reactome:R-HSA-372448") +AnnotationAssertion(rdfs:label "acidic amino acid transmembrane transporter activity") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (gamma-aminobutyric acid transmembrane transporter activity) + +AnnotationAssertion(Annotation( "GOC:go_curators") Annotation( "GOC:mtg_transport") Annotation( "ISBN:0198506732") Annotation( "ISBN:0815340729") "Enables the transfer of gamma-aminobutyric acid from one side of a membrane to the other. Gamma-aminobutyric acid is 4-aminobutyrate (GABA).") +AnnotationAssertion(rdfs:label "gamma-aminobutyric acid transmembrane transporter activity") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (actin cytoskeleton) AnnotationAssertion(Annotation( "GOC:jl") Annotation( "ISBN:0395825172") Annotation( "ISBN:0815316194") "The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes.") @@ -18819,6 +22939,26 @@ AnnotationAssertion(rdfs:label "poly EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (acidic amino acid transport) + +AnnotationAssertion(Annotation( "GOC:ai") "The directed movement of acidic amino acids, amino acids with a pH below 7, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.") +AnnotationAssertion(rdfs:label "acidic amino acid transport") +SubClassOf( ) + +# Class: (gamma-aminobutyric acid transport) + +AnnotationAssertion(Annotation( "GOC:go_curators") Annotation( "ISBN:0198506732") "The directed movement of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.") +AnnotationAssertion(rdfs:comment "See also the biological process term 'neurotransmitter transport ; GO:0006836'.") +AnnotationAssertion(rdfs:label "gamma-aminobutyric acid transport") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (L-glutamate transmembrane transport) + +AnnotationAssertion(Annotation( "PMID:21307582") "The directed movement of L-glutamate across a membrane by means of some agent such as a transporter or a pore.") +AnnotationAssertion(rdfs:label "L-glutamate transmembrane transport") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) + # Class: (peptide transport) AnnotationAssertion(Annotation( "GOC:ai") "The directed movement of peptides, compounds of two or more amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.") @@ -18845,14 +22985,6 @@ AnnotationAssertion(rdfs:label "orga EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -# Class: (protein-DNA complex transport) - -AnnotationAssertion(Annotation( "GOC:ai") "The directed movement of protein-DNA complexes into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.") -AnnotationAssertion(rdfs:label "protein-DNA complex transport") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) - # Class: (norepinephrine transport) AnnotationAssertion(Annotation( "GOC:ai") Annotation( "ISBN:0198506732") "The directed movement of norepinephrine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Norepinephrine (3,4-dihydroxyphenyl-2-aminoethanol) is a hormone secreted by the adrenal medulla and a neurotransmitter in the sympathetic peripheral nervous system and in some tracts of the CNS. It is also the biosynthetic precursor of epinephrine.") @@ -18860,19 +22992,6 @@ AnnotationAssertion(rdfs:label "nore EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -# Class: (nucleobase-containing compound transport) - -AnnotationAssertion(Annotation( "GOC:ai") "The directed movement of nucleobases, nucleosides, nucleotides and nucleic acids, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.") -AnnotationAssertion(rdfs:label "nucleobase-containing compound transport") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) - -# Class: (nucleobase-containing compound transmembrane transporter activity) - -AnnotationAssertion(Annotation( "GOC:ai") "Enables the transfer of nucleobases, nucleosides, nucleotides and nucleic acids from one side of a membrane to the other.") -AnnotationAssertion(rdfs:label "nucleobase-containing compound transmembrane transporter activity") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (energy derivation by oxidation of organic compounds) AnnotationAssertion(Annotation( "GOC:mah") "The chemical reactions and pathways by which a cell derives energy from organic compounds; results in the oxidation of the compounds from which energy is released.") @@ -18935,7 +23054,6 @@ AnnotationAssertion(Annotation( "organic acid biosynthetic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ) # Class: (organic acid catabolic process) @@ -19005,6 +23123,12 @@ SubClassOf( ObjectComplementOf(Object SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) DisjointClasses( ObjectSomeValuesFrom( )) +# Class: (cytosolic transport) + +AnnotationAssertion(Annotation( "GOC:ai") "The directed movement of substances or organelles within the cytosol.") +AnnotationAssertion(rdfs:label "cytosolic transport") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + # Class: (negative regulation of angiogenesis) AnnotationAssertion(Annotation( "GOC:go_curators") "Any process that stops, prevents, or reduces the frequency, rate or extent of angiogenesis.") @@ -19024,32 +23148,6 @@ SubClassOf( ObjectComplementOf(Object SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) DisjointClasses( ObjectSomeValuesFrom( )) -# Class: (hydrolase activity) - -AnnotationAssertion(Annotation( "ISBN:0198506732") "Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc.") -AnnotationAssertion( "EC:3.-.-.-") -AnnotationAssertion(Annotation(rdfs:label "Partial proteolysis of antigen in phagolysosomes") "Reactome:R-HSA-1236938") -AnnotationAssertion(Annotation(rdfs:label "Production of AA by iPLA2 upon FCGR activation") "Reactome:R-HSA-2029475") -AnnotationAssertion(Annotation(rdfs:label "ABHD4 hydrolyses NAPE") "Reactome:R-HSA-5694583") -AnnotationAssertion(Annotation(rdfs:label "ABHD14B hydrolyses PNPB") "Reactome:R-HSA-5695964") -AnnotationAssertion(Annotation(rdfs:label "CMBL hydrolyses OM to OLMS") "Reactome:R-HSA-6786190") -AnnotationAssertion(Annotation(rdfs:label "HDHD1:Mg2+ dephosphorylates PURIDP") "Reactome:R-HSA-6788295") -AnnotationAssertion(Annotation(rdfs:label "ENPPs hydrolyse CoA-SH to PPANT, PAP") "Reactome:R-HSA-8938314") -AnnotationAssertion(Annotation(rdfs:label "Phospholipid phosphatase 6 hydrolyses Presqualene diphosphate to presqualene monophosphate") "Reactome:R-HSA-8952137") -AnnotationAssertion(rdfs:label "hydrolase activity") -SubClassOf( ) - -# Class: (hydrolase activity, acting on ester bonds) - -AnnotationAssertion(Annotation( "GOC:jl") "Catalysis of the hydrolysis of any ester bond.") -AnnotationAssertion( "EC:3.1.-.-") -AnnotationAssertion(Annotation(rdfs:label "uPAR-acyl-GPI + H2O -> uPAR + long-chain fatty acid") "Reactome:R-HSA-162729") -AnnotationAssertion(Annotation(rdfs:label "Butyrylcholinesterase hydrolyzes acyl Ghrelin") "Reactome:R-HSA-9023617") -AnnotationAssertion(Annotation(rdfs:label "Platelet-activating factor acetylhydrolase (PLA2G7) hydrolyzes acyl Ghrelin") "Reactome:R-HSA-9023619") -AnnotationAssertion(Annotation(rdfs:label "BCHE hydrolyzes ASA-") "Reactome:R-HSA-9749609") -AnnotationAssertion(rdfs:label "hydrolase activity, acting on ester bonds") -SubClassOf( ) - # Class: (nucleologenesis) AnnotationAssertion(Annotation( "GOC:jl") Annotation( "ISBN:0198506732") "A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a nucleolus, a small, dense body one or more of which are present in the nucleus of eukaryotic cells.") @@ -19062,6 +23160,15 @@ SubClassOf( "GOC:jid") Annotation( "ISBN:0582227089") "The self-renewing division of a stem cell. A stem cell is an undifferentiated cell, in the embryo or adult, that can undergo unlimited division and give rise to one or several different cell types.") AnnotationAssertion(rdfs:label "stem cell division") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) +SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) +SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) +SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) +SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) +SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) +DisjointClasses( ObjectSomeValuesFrom( )) +DisjointClasses( ObjectSomeValuesFrom( )) +DisjointClasses( ObjectSomeValuesFrom( )) # Class: (negative regulation of translation) @@ -19107,12 +23214,6 @@ AnnotationAssertion(rdfs:label "regu EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -# Class: (regulation of nucleobase-containing compound metabolic process) - -AnnotationAssertion(Annotation( "GOC:go_curators") "Any cellular process that modulates the frequency, rate or extent of the chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids.") -AnnotationAssertion(rdfs:label "regulation of nucleobase-containing compound metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) - # Class: (regulation of metabolic process) AnnotationAssertion(Annotation( "GOC:go_curators") "Any process that modulates the frequency, rate or extent of the chemical reactions and pathways within a cell or an organism.") @@ -19192,6 +23293,13 @@ SubClassOf( ObjectSomeValuesFrom( ObjectAllValuesFrom( )) DisjointClasses( ) +# Class: (antimicrobial humoral response) + +AnnotationAssertion(Annotation( "GOC:go_curators") Annotation( "GOC:mtg_sensu") "An immune response against microbes mediated through a body fluid. Examples of this process are seen in the antimicrobial humoral response of Drosophila melanogaster and Mus musculus.") +AnnotationAssertion(rdfs:label "antimicrobial humoral response") +SubClassOf( ) +SubClassOf( ) + # Class: (carboxylic acid metabolic process) AnnotationAssertion(Annotation( "ISBN:0198506732") "The chemical reactions and pathways involving carboxylic acids, any organic acid containing one or more carboxyl (COOH) groups or anions (COO-).") @@ -19308,6 +23416,31 @@ SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( )) SubClassOf( ObjectAllValuesFrom( )) +# Class: (diencephalon development) + +AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") Annotation( "ISBN:0838580343") "The process whose specific outcome is the progression of the diencephalon over time, from its formation to the mature structure. The diencephalon is the paired caudal parts of the prosencephalon from which the thalamus, hypothalamus, epithalamus and subthalamus are derived; these regions regulate autonomic, visceral and endocrine function, and process information directed to the cerebral cortex.") +AnnotationAssertion(rdfs:label "diencephalon development") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (telencephalon development) + +AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") Annotation( "PMID:12626695") "The process whose specific outcome is the progression of the telencephalon over time, from its formation to the mature structure. The telencephalon is the paired anteriolateral division of the prosencephalon plus the lamina terminalis from which the olfactory lobes, cerebral cortex, and subcortical nuclei are derived.") +AnnotationAssertion(rdfs:label "telencephalon development") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (pallium development) + +AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") Annotation( "PMID:12626695") "The process whose specific outcome is the progression of the pallium over time, from its formation to the mature structure. The pallium is the roof region of the telencephalon.") +AnnotationAssertion(rdfs:label "pallium development") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (cranial nerve development) AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") Annotation( "ISBN:0838580343") "The process whose specific outcome is the progression of the cranial nerves over time, from its formation to the mature structure. The cranial nerves are composed of twelve pairs of nerves that emanate from the nervous tissue of the hindbrain. These nerves are sensory, motor, or mixed in nature, and provide the motor and general sensory innervation of the head, neck and viscera. They mediate vision, hearing, olfaction and taste and carry the parasympathetic innervation of the autonomic ganglia that control visceral functions.") @@ -19340,6 +23473,15 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (cerebellum development) + +AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") Annotation( "ISBN:0838580343") "The process whose specific outcome is the progression of the cerebellum over time, from its formation to the mature structure. The cerebellum is the portion of the brain in the back of the head between the cerebrum and the pons. In mice, the cerebellum controls balance for walking and standing, modulates the force and range of movement and is involved in the learning of motor skills.") +AnnotationAssertion(rdfs:label "cerebellum development") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (medulla oblongata development) AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") Annotation( "ISBN:0838580343") "The process whose specific outcome is the progression of the medulla oblongata over time, from its formation to the mature structure. The medulla oblongata lies directly above the spinal cord and controls vital autonomic functions such as digestion, breathing and the control of heart rate.") @@ -19382,6 +23524,43 @@ AnnotationAssertion(rdfs:label "trig EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +# Class: (facial nerve development) + +AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") Annotation( "ISBN:0838580343") "The process whose specific outcome is the progression of the facial nerve over time, from its formation to the mature structure. This sensory and motor nerve supplies the muscles of facial expression and the expression and taste at the anterior two-thirds of the tongue. The principal branches are the superficial ophthalmic, buccal, palatine and hyomandibular. The main trunk synapses within pterygopalatine ganglion in the parotid gland and this ganglion then gives off nerve branches which supply the lacrimal gland and the mucous secreting glands of the nasal and oral cavities.") +AnnotationAssertion(rdfs:label "facial nerve development") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (glossopharyngeal nerve development) + +AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") Annotation( "ISBN:0838580343") "Various sensory and motor branches of the glossopharyngeal nerve supply nerve connections to the pharynx and back of the tongue. The branchial motor component contains motor fibers that innervate muscles that elevate the pharynx and larynx, and the tympanic branch supplies parasympathetic fibers to the otic ganglion.") +AnnotationAssertion(rdfs:label "glossopharyngeal nerve development") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) + +# Class: (vagus nerve development) + +AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") Annotation( "ISBN:0838580343") "The process whose specific outcome is the progression of the vagus nerve over time, from its formation to the mature structure. This nerve is primarily sensory but also has visceromotor components. It originates in the brain stem and controls many autonomic functions of the heart, lungs, stomach, pharynx, larynx, trachea, esophagus and other gastrointestinal tract components. It controls some motor functions such as speech. The sensory branches mediate sensation from the pharynx, larynx, thorax and abdomen; it also innervates taste buds in the epiglottis.") +AnnotationAssertion(rdfs:label "vagus nerve development") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (accessory nerve development) + +AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") Annotation( "ISBN:0838580343") "The process whose specific outcome is the progression of the accessory nerve over time, from its formation to the mature structure. In mice, the spinal branch of this motor nerve innervates the trapezius and the sternocleidomastoid muscles. The cranial branch joins the vagus nerve and innervates the same targets as the vagus nerve.") +AnnotationAssertion(rdfs:label "accessory nerve development") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) + +# Class: (rhombomere 1 development) + +AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:curators") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") "The process whose specific outcome is the progression of rhombomere 1 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order.") +AnnotationAssertion(rdfs:label "rhombomere 1 development") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) + # Class: (hindbrain morphogenesis) AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") Annotation( "ISBN:0838580343") "The process in which the anatomical structure of the hindbrain is generated and organized. The hindbrain is the region consisting of the medulla, pons and cerebellum. Areas of the hindbrain control motor and autonomic functions.") @@ -19467,6 +23646,53 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (cerebellum morphogenesis) + +AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") Annotation( "ISBN:0838580343") "The process in which the anatomical structure of the cerebellum is generated and organized. The cerebellum is the portion of the brain in the back of the head between the cerebrum and the pons. The cerebellum controls balance for walking and standing, modulates the force and range of movement and is involved in the learning of motor skills.") +AnnotationAssertion(rdfs:label "cerebellum morphogenesis") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (cerebellum formation) + +AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") Annotation( "ISBN:0838580343") "The process that gives rise to the cerebellum. This process pertains to the initial formation of a structure from unspecified parts. The cerebellum is the portion of the brain in the back of the head between the cerebrum and the pons. The cerebellum controls balance for walking and standing, modulates the force and range of movement and is involved in the learning of motor skills.") +AnnotationAssertion(rdfs:label "cerebellum formation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (cerebellum maturation) + +AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") Annotation( "ISBN:0838580343") "A developmental process, independent of morphogenetic (shape) change, that is required for the cerebellum to attain its fully functional state. The cerebellum is the portion of the brain in the back of the head between the cerebrum and the pons. The cerebellum controls balance for walking and standing, modulates the force and range of movement and is involved in the learning of motor skills.") +AnnotationAssertion(rdfs:label "cerebellum maturation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (ventricular system development) + +AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") Annotation( "ISBN:0838580343") "The process whose specific outcome is the progression of the brain ventricular system over time, from its formation to the mature structure. The brain ventricular system consists of four communicating cavities within the brain that are continuous with the central canal of the spinal cord. These cavities include two lateral ventricles, the third ventricle and the fourth ventricle. Cerebrospinal fluid fills the ventricles and is produced by the choroid plexus.") +AnnotationAssertion(rdfs:label "ventricular system development") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (fourth ventricle development) + +AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") Annotation( "ISBN:0838580343") "The process whose specific outcome is the progression of the fourth ventricle over time, from its formation to the mature structure. The fourth ventricle is an irregularly shaped cavity in the rhombencephalon, between the medulla oblongata, the pons, and the isthmus in front, and the cerebellum behind. It is continuous with the central canal of the cord below and with the cerebral aqueduct above, and through its lateral and median apertures it communicates with the subarachnoid space.") +AnnotationAssertion(rdfs:label "fourth ventricle development") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (rhombomere morphogenesis) AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") Annotation( "ISBN:0838580343") "The process in which the anatomical structure of the rhombomere is generated and organized. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates.") @@ -19511,6 +23737,78 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (accessory nerve maturation) + +AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") Annotation( "ISBN:0838580343") "A developmental process, independent of morphogenetic (shape) change, that is required for the accessory nerve to attain its fully functional state. The spinal branch of this motor nerve innervates the trapezius and the sternocleidomastoid muscles. The cranial branch joins the vagus nerve and innervates the same targets as the vagus nerve.") +AnnotationAssertion(rdfs:label "accessory nerve maturation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (accessory nerve morphogenesis) + +AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") Annotation( "ISBN:0838580343") "The process in which the anatomical structure of the accessory nerve is generated and organized. The spinal branch of this motor nerve innervates the trapezius and the sternocleidomastoid muscles. The cranial branch joins the vagus nerve and innervates the same targets as the vagus nerve.") +AnnotationAssertion(rdfs:label "accessory nerve morphogenesis") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (accessory nerve formation) + +AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") Annotation( "ISBN:0838580343") "The process that gives rise to the accessory nerve. This process pertains to the initial formation of a structure from unspecified parts. The spinal branch of this motor nerve innervates the trapezius and the sternocleidomastoid muscles. The cranial branch joins the vagus nerve and innervates the same targets as the vagus nerve.") +AnnotationAssertion(rdfs:label "accessory nerve formation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (facial nerve morphogenesis) + +AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") Annotation( "ISBN:0838580343") "The process in which the anatomical structure of the facial nerve is generated and organized. This sensory and motor nerve supplies the muscles of facial expression and the expression and taste at the anterior two-thirds of the tongue. The principal branches are the superficial ophthalmic, buccal, palatine and hyomandibular. The main trunk synapses within pterygopalatine ganglion in the parotid gland and this ganglion then gives of nerve branches which supply the lacrimal gland and the mucous secreting glands of the nasal and oral cavities.") +AnnotationAssertion(rdfs:label "facial nerve morphogenesis") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (facial nerve formation) + +AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") Annotation( "ISBN:0838580343") "The process that gives rise to the facial nerve. This process pertains to the initial formation of a structure from unspecified parts. This sensory and motor nerve supplies the muscles of facial expression and the expression and taste at the anterior two-thirds of the tongue. The principal branches are the superficial ophthalmic, buccal, palatine and hyomandibular. The main trunk synapses within pterygopalatine ganglion in the parotid gland and this ganglion then gives of nerve branches which supply the lacrimal gland and the mucous secreting glands of the nasal and oral cavities.") +AnnotationAssertion(rdfs:label "facial nerve formation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (facial nerve maturation) + +AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") Annotation( "ISBN:0838580343") "A developmental process, independent of morphogenetic (shape) change, that is required for the facial nerve to attain its fully functional state. This sensory and motor nerve supplies the muscles of facial expression and the expression and taste at the anterior two-thirds of the tongue. The principal branches are the superficial ophthalmic, buccal, palatine and hyomandibular. The main trunk synapses within pterygopalatine ganglion in the parotid gland and this ganglion then gives of nerve branches which supply the lacrimal gland and the mucous secreting glands of the nasal and oral cavities.") +AnnotationAssertion(rdfs:label "facial nerve maturation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (glossopharyngeal nerve maturation) + +AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") Annotation( "ISBN:0838580343") "A developmental process, independent of morphogenetic (shape) change, that is required for the glossopharyngeal nerve to attain its fully functional state. Various sensory and motor branches of the glossopharyngeal nerve supply nerve connections to the pharynx and back of the tongue. The branchial motor component contains motor fibers that innervate muscles that elevate the pharynx and larynx, and the tympanic branch supplies parasympathetic fibers to the otic ganglion.") +AnnotationAssertion(rdfs:label "glossopharyngeal nerve maturation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (glossopharyngeal nerve morphogenesis) + +AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") Annotation( "ISBN:0838580343") "The process in which the anatomical structure of the glossopharyngeal nerve is generated and organized. Various sensory and motor branches of the glossopharyngeal nerve supply nerve connections to the pharynx and back of the tongue. The branchial motor component contains motor fibers that innervate muscles that elevate the pharynx and larynx, and the tympanic branch supplies parasympathetic fibers to the otic ganglion.") +AnnotationAssertion(rdfs:label "glossopharyngeal nerve morphogenesis") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (glossopharyngeal nerve formation) + +AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") Annotation( "ISBN:0838580343") "The process that gives rise to the glossopharyngeal nerve. This process pertains to the initial formation of a structure from unspecified parts. Various sensory and motor branches of the glossopharyngeal nerve supply nerve connections to the pharynx and back of the tongue. The branchial motor component contains motor fibers that innervate muscles that elevate the pharynx and larynx, and the tympanic branch supplies parasympathetic fibers to the otic ganglion.") +AnnotationAssertion(rdfs:label "glossopharyngeal nerve formation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (central nervous system maturation) AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") Annotation( "ISBN:0582227089") "A developmental process, independent of morphogenetic (shape) change, that is required for the central nervous system to attain its fully functional state. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain and spinal cord. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord.") @@ -19543,6 +23841,46 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (vagus nerve maturation) + +AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") Annotation( "ISBN:0838580343") "A developmental process, independent of morphogenetic (shape) change, that is required for the vagus nerve to attain its fully functional state. This nerve is primarily sensory but also has visceromotor components. It originates in the brain stem and controls many autonomic functions of the heart, lungs, stomach, pharynx, larynx, trachea, esophagus and other gastrointestinal tract components. It controls some motor functions such as speech. The sensory branches mediate sensation from the pharynx, larynx, thorax and abdomen; it also innervates taste buds in the epiglottis.") +AnnotationAssertion(rdfs:label "vagus nerve maturation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (vagus nerve morphogenesis) + +AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") Annotation( "ISBN:0838580343") "The process in which the anatomical structure of the vagus nerve is generated and organized. This nerve is primarily sensory but also has visceromotor components. It originates in the brain stem and controls many autonomic functions of the heart, lungs, stomach, pharynx, larynx, trachea, esophagus and other gastrointestinal tract components. It controls some motor functions such as speech. The sensory branches mediate sensation from the pharynx, larynx, thorax and abdomen; it also innervates taste buds in the epiglottis.") +AnnotationAssertion(rdfs:label "vagus nerve morphogenesis") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (vagus nerve formation) + +AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") Annotation( "ISBN:0838580343") "The process that gives rise to the vagus nerve. This process pertains to the initial formation of a structure from unspecified parts. This nerve is primarily sensory but also has visceromotor components. It originates in the brain stem and controls many autonomic functions of the heart, lungs, stomach, pharynx, larynx, trachea, esophagus and other gastrointestinal tract components. It controls some motor functions such as speech. The sensory branches mediate sensation from the pharynx, larynx, thorax and abdomen; it also innervates taste buds in the epiglottis.") +AnnotationAssertion(rdfs:label "vagus nerve formation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (rhombomere 1 morphogenesis) + +AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:curators") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") "The process in which the anatomical structure of rhombomere 1 is generated and organized. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order.") +AnnotationAssertion(rdfs:label "rhombomere 1 morphogenesis") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (rhombomere 1 formation) + +AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:curators") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") "The process that gives rise to rhombomere 1. This process pertains to the initial formation of a structure from unspecified parts. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order.") +AnnotationAssertion(rdfs:label "rhombomere 1 formation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (rhombomere boundary formation) AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") "The process that gives rise to a rhombomere boundary. This process pertains to the initial formation of a boundary delimiting a rhombomere. Rhombomeres are transverse segments of the developing rhombencephalon that are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order.") @@ -19551,6 +23889,16 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (lateral ventricle development) + +AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") Annotation( "ISBN:0838580343") "The process whose specific outcome is the progression of the lateral ventricles over time, from the formation to the mature structure. The two lateral ventricles are a cavity in each of the cerebral hemispheres derived from the cavity of the embryonic neural tube. They are separated from each other by the septum pellucidum, and each communicates with the third ventricle by the foramen of Monro, through which also the choroid plexuses of the lateral ventricles become continuous with that of the third ventricle.") +AnnotationAssertion(rdfs:label "lateral ventricle development") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (nerve development) AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") "The process whose specific outcome is the progression of a nerve over time, from its formation to the mature structure.") @@ -19560,6 +23908,15 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (cerebellar granular layer development) + +AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") Annotation( "ISBN:0838580343") "The process whose specific outcome is the progression of the cerebellar granule layer over time, from its formation to the mature structure. The granular layer is the innermost layer of the cerebellar cortex. This layer contains densely packed small neurons, mostly granule cells. Some Golgi cells are found at the outer border. Granule neurons send parallel fibers to the upper molecular layer, where they synapse with Purkinje cell dendrites. Mossy fibers from the pontine nuclei in the white matter synapse with granule cell axons, Golgi cell axons and unipolar brush interneuron axons at cerebellar glomeruli in the granule cell layer.") +AnnotationAssertion(rdfs:label "cerebellar granular layer development") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (nerve maturation) AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") "A developmental process, independent of morphogenetic (shape) change, that is required for a nerve to attain its fully functional state.") @@ -19568,12 +23925,87 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (cerebellar granular layer morphogenesis) + +AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") Annotation( "ISBN:0838580343") "The process in which the anatomical structure of the cerebellar granular layer is generated and organized. The granular layer is the innermost layer of the cerebellar cortex. This layer contains densely packed small neurons, mostly granule cells. Some Golgi cells are found at the outer border. Granule neurons send parallel fibers to the upper molecular layer, where they synapse with Purkinje cell dendrites. Mossy fibers from the pontine nuclei in the white matter synapse with granule cell axons, Golgi cell axons and unipolar brush interneuron axons at cerebellar glomeruli in the granule cell layer.") +AnnotationAssertion(rdfs:label "cerebellar granular layer morphogenesis") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (cerebellar granular layer formation) + +AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") Annotation( "ISBN:0838580343") "The process that gives rise to the cerebellar granule layer. This process pertains to the initial formation of a structure from unspecified parts. The granular layer is the innermost layer of the cerebellar cortex. This layer contains densely packed small neurons, mostly granule cells. Some Golgi cells are found at the outer border. Granule neurons send parallel fibers to the upper molecular layer, where they synapse with Purkinje cell dendrites. Mossy fibers from the pontine nuclei in the white matter synapse with granule cell axons, Golgi cell axons and unipolar brush interneuron axons at cerebellar glomeruli in the granule cell layer.") +AnnotationAssertion(rdfs:label "cerebellar granular layer formation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (cerebellar granular layer maturation) + +AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") Annotation( "ISBN:0838580343") "A developmental process, independent of morphogenetic (shape) change, that is required for the cerebellar granular layer to attain its fully functional state. The granular layer is the innermost layer of the cerebellar cortex. This layer contains densely packed small neurons, mostly granule cells. Some Golgi cells are found at the outer border. Granule neurons send parallel fibers to the upper molecular layer, where they synapse with Purkinje cell dendrites. Mossy fibers from the pontine nuclei in the white matter synapse with granule cell axons, Golgi cell axons and unipolar brush interneuron axons at cerebellar glomeruli in the granule cell layer.") +AnnotationAssertion(rdfs:label "cerebellar granular layer maturation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (cerebellar cortex development) + +AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") Annotation( "ISBN:0838580343") "The process whose specific outcome is the progression of the cerebellar cortex over time, from its formation to the mature structure. The cerebellar cortex is a thin mantle of gray matter that covers the surface of each cerebral hemisphere. It has a characteristic morphology with convolutions (gyri) and crevices (sulci) that have specific functions. Six layers of nerve cells and the nerve pathways that connect them comprise the cerebellar cortex. Together, these regions are responsible for the processes of conscious thought, perception, emotion and memory as well as advanced motor function.") +AnnotationAssertion(rdfs:label "cerebellar cortex development") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (cerebellar cortex morphogenesis) + +AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") Annotation( "ISBN:0838580343") "The process in which the anatomical structure of the cranial nerves are generated and organized. The cerebellar cortex is a thin mantle of gray matter that covers the surface of each cerebral hemisphere. It has a characteristic morphology with convolutions (gyri) and crevices (sulci) that have specific functions. Six layers of nerve cells and the nerve pathways that connect them comprise the cerebellar cortex. Together, these regions are responsible for the processes of conscious thought, perception, emotion and memory as well as advanced motor function.") +AnnotationAssertion(rdfs:label "cerebellar cortex morphogenesis") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (cerebellar cortex formation) + +AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") Annotation( "ISBN:0838580343") "The process that gives rise to the cerebellar cortex. This process pertains to the initial formation of a structure from unspecified parts. The cerebellar cortex is a thin mantle of gray matter that covers the surface of each cerebral hemisphere. It has a characteristic morphology with convolutions (gyri) and crevices (sulci) that have specific functions. Six layers of nerve cells and the nerve pathways that connect them comprise the cerebellar cortex. Together, these regions are responsible for the processes of conscious thought, perception, emotion and memory as well as advanced motor function.") +AnnotationAssertion(rdfs:label "cerebellar cortex formation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (cerebellar cortex maturation) + +AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") Annotation( "ISBN:0838580343") "A developmental process, independent of morphogenetic (shape) change, that is required for the cerebellar cortex to attain its fully functional state. The cerebellar cortex is a thin mantle of gray matter that covers the surface of each cerebral hemisphere. It has a characteristic morphology with convolutions (gyri) and crevices (sulci) that have specific functions. Six layers of nerve cells and the nerve pathways that connect them comprise the cerebellar cortex. Together, these regions are responsible for the processes of conscious thought, perception, emotion and memory as well as advanced motor function.") +AnnotationAssertion(rdfs:label "cerebellar cortex maturation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (developmental maturation) AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") "A developmental process, independent of morphogenetic (shape) change, that is required for an anatomical structure, cell or cellular component to attain its fully functional state.") AnnotationAssertion(rdfs:label "developmental maturation") SubClassOf( ) +# Class: (cerebellar Golgi cell differentiation) + +AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") Annotation( "PMID:15157725") "The process in which neuroblasts acquire specialized structural and/or functional features that characterize the mature cerebellar Golgi cell. Differentiation includes the processes involved in commitment of a neuroblast to a Golgi cell fate. A cerebellar Golgi cell is an inhibitory GABAergic interneuron found in the cerebellar cortex.") +AnnotationAssertion(rdfs:label "cerebellar Golgi cell differentiation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (locus ceruleus development) AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") Annotation( "ISBN:0838580343") "The process whose specific outcome is the progression of the locus ceruleus over time, from its formation to the mature structure. The locus ceruleus is a dense cluster of neurons within the dorsorostral pons. This nucleus is the major location of neurons that release norepinephrine throughout the brain, and is responsible for physiological responses to stress and panic.") @@ -19612,6 +24044,15 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (cerebellar granule cell differentiation) + +AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") Annotation( "PMID:15157725") "The process in which neuroblasts acquire specialized structural and/or functional features that characterize the mature cerebellar granule cell. Differentiation includes the processes involved in commitment of a neuroblast to a granule cell fate. A granule cell is a glutamatergic interneuron found in the cerebellar cortex.") +AnnotationAssertion(rdfs:label "cerebellar granule cell differentiation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (superior olivary nucleus development) AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") Annotation( "ISBN:0838580343") "The process whose specific outcome is the progression of the superior olivary nucleus over time, from its formation to the mature structure. In mice, the superior olivary nucleus is a small cylindrical mass on the dorsal surface of the lateral part of the trapezoid body of the pons, and it is situated immediately above the inferior olivary nucleus. It receives projections from the cochlear nucleus and thus is involved in the perception of sound.") @@ -19672,6 +24113,14 @@ AnnotationAssertion(rdfs:label "supe EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +# Class: (facial nucleus development) + +AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:curators") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") "The process whose specific outcome is the progression of the facial nucleus over time, from its formation to the mature structure.") +AnnotationAssertion(rdfs:label "facial nucleus development") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (glial cell development) AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") "The process aimed at the progression of a glial cell over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell.") @@ -19680,6 +24129,183 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (preganglionic parasympathetic fiber development) + +AnnotationAssertion(Annotation( "GOC:cjm") Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") "The process whose specific outcome is the progression of a preganglionic parasympathetic fiber over time, from its formation to the mature structure. A preganglionic parasympathetic fiber is a cholinergic axonal fiber projecting from the CNS to a parasympathetic ganglion.") +AnnotationAssertion(rdfs:label "preganglionic parasympathetic fiber development") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (cerebral cortex cell migration) + +AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") "The orderly movement of cells from one site to another in the cerebral cortex.") +AnnotationAssertion(rdfs:label "cerebral cortex cell migration") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (cerebral cortex radially oriented cell migration) + +AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") Annotation( "PMID:12626695") "The migration of cells in the developing cerebral cortex in which cells move from the ventricular and/or subventricular zone toward the surface of the brain.") +AnnotationAssertion(rdfs:label "cerebral cortex radially oriented cell migration") +SubClassOf( ) + +# Class: (cerebral cortex radial glia-guided migration) + +AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") Annotation( "PMID:12626695") "The radial migration of neuronal or glial precursor cells along radial glial cells during the development of the cerebral cortex.") +AnnotationAssertion(rdfs:label "cerebral cortex radial glia-guided migration") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (cell motility involved in cerebral cortex radial glia guided migration) + +AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") Annotation( "PMID:12626695") "The movement of a cell along the process of a radial glial cell involved in cerebral cortex glial-mediated radial migration.") +AnnotationAssertion(rdfs:label "cell motility involved in cerebral cortex radial glia guided migration") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (modulation of microtubule cytoskeleton involved in cerebral cortex radial glia guided migration) + +AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") Annotation( "PMID:12626695") "Rearrangements of the microtubule cytoskeleton that contribute to the movement of cells along radial glial cells as a component of the process of cerebral cortex glial-mediated radial migration.") +AnnotationAssertion(rdfs:label "modulation of microtubule cytoskeleton involved in cerebral cortex radial glia guided migration") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (layer formation in cerebral cortex) + +AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") Annotation( "PMID:12626695") "The detachment of cells from radial glial fibers at the appropriate time when they cease to migrate and form distinct layer in the cerebral cortex.") +AnnotationAssertion(rdfs:label "layer formation in cerebral cortex") +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (negative regulation of cell motility involved in cerebral cortex radial glia guided migration) + +AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GOC:tb") Annotation( "GO_REF:0000021") Annotation( "PMID:12626695") "The intracellular signaling pathway that results in the cessation of cell movement involved in lamination of the cerebral cortex.") +AnnotationAssertion(rdfs:label "negative regulation of cell motility involved in cerebral cortex radial glia guided migration") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (substrate-independent telencephalic tangential migration) + +AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") Annotation( "PMID:12626695") "The process where neuronal precursors migrate tangentially in the telencephalon, primarily guided by interactions that do not require cell-cell contact.") +AnnotationAssertion(rdfs:label "substrate-independent telencephalic tangential migration") +SubClassOf( ) + +# Class: (interneuron migration from the subpallium to the cortex) + +AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") Annotation( "PMID:12626695") "The directed movement of interneurons from the subpallium to the cortex during forebrain development.") +AnnotationAssertion(rdfs:label "interneuron migration from the subpallium to the cortex") +SubClassOf( ) + +# Class: (substrate-independent telencephalic tangential interneuron migration) + +AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") Annotation( "PMID:12626695") "The directional movement of tangentially migrating interneurons that are not guided by attaching to extracellular substrates.") +AnnotationAssertion(rdfs:label "substrate-independent telencephalic tangential interneuron migration") +SubClassOf( ) + +# Class: (cell proliferation in forebrain) + +AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") "The creation of greater cell numbers in the forebrain due to cell division of progenitor cells.") +AnnotationAssertion(rdfs:label "cell proliferation in forebrain") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (pyramidal neuron migration to cerebral cortex) + +AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") Annotation( "PMID:12626695") Annotation( "PMID:22192824") "The migration of a pyramidal neuron precursor from the ventricular zone to the correct layer of the cerebral cortex.") +AnnotationAssertion(rdfs:label "pyramidal neuron migration to cerebral cortex") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (cerebral cortex GABAergic interneuron migration) + +AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") Annotation( "PMID:12626695") "The migration of GABAergic interneuron precursors from the subpallium to the cerebral cortex.") +AnnotationAssertion(rdfs:label "cerebral cortex GABAergic interneuron migration") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (pyramidal neuron differentiation) + +AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") "The process in which a neuroblast or one of its progeny commits to a pyramidal neuron fate, migrates from the ventricular zone to the appropriate layer in the cortex and develops into a mature neuron.") +AnnotationAssertion(rdfs:label "pyramidal neuron differentiation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) + +# Class: (pyramidal neuron development) + +AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") "The progression of a pyramidal neuron from its initial formation to its mature state.") +AnnotationAssertion(rdfs:label "pyramidal neuron development") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (forebrain neuroblast differentiation) + +AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") Annotation( "PMID:16226447") "The process in which neuroepithelial cells in the neural tube acquire specialized structural and/or functional features of basal progenitor cells, neuroblasts that lose their contacts with the ventricular surface. Differentiation includes the processes involved in commitment of a cell to a specific fate.") +AnnotationAssertion(rdfs:label "forebrain neuroblast differentiation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (forebrain generation of neurons) + +AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") "The process in which nerve cells are generated in the forebrain. This includes the production of neuroblasts from and their differentiation into neurons.") +AnnotationAssertion(rdfs:label "forebrain generation of neurons") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (forebrain neuron differentiation) + +AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") Annotation( "PMID:16226447") "The process in which a relatively unspecialized cell acquires specialized features of a neuron that will reside in the forebrain.") +AnnotationAssertion(rdfs:label "forebrain neuron differentiation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (forebrain neuron development) + +AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") "The process whose specific outcome is the progression of a neuron that resides in the forebrain, from its initial commitment to its fate, to the fully functional differentiated cell.") +AnnotationAssertion(rdfs:label "forebrain neuron development") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (forebrain cell migration) + +AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") "The orderly movement of a cell from one site to another at least one of which is located in the forebrain.") +AnnotationAssertion(rdfs:label "forebrain cell migration") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (cerebral cortex GABAergic interneuron differentiation) + +AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") Annotation( "PMID:12626695") "The process in which a relatively unspecialized cell acquires specialized features of a GABAergic interneuron residing in the cerebral cortex.") +AnnotationAssertion(rdfs:label "cerebral cortex GABAergic interneuron differentiation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) + +# Class: (cerebral cortex GABAergic interneuron development) + +AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") Annotation( "PMID:12626695") "The process whose specific outcome is the progression of a cerebral cortex GABAergic interneuron over time, from initial commitment to its fate, to the fully functional differentiated cell.") +AnnotationAssertion(rdfs:label "cerebral cortex GABAergic interneuron development") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (cerebral cortex neuron differentiation) + +AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") "The process in which a relatively unspecialized cell acquires specialized features of a neuron residing in the cerebral cortex.") +AnnotationAssertion(rdfs:label "cerebral cortex neuron differentiation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (rostrocaudal neural tube patterning) AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") Annotation( "PMID:11262869") "The process in which the neural tube is divided into specific regions along the rostrocaudal axis.") @@ -19687,6 +24313,15 @@ AnnotationAssertion(rdfs:label "rost SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (forebrain-midbrain boundary formation) + +AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") Annotation( "PMID:11262869") "The process whose specific outcome is the creation of the forebrain-midbrain boundary.") +AnnotationAssertion(rdfs:label "forebrain-midbrain boundary formation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (hindbrain-spinal cord boundary formation) AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") Annotation( "PMID:11262869") "The process whose specific outcome is the formation of the hindbrain-spinal cord boundary.") @@ -19723,6 +24358,15 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (cerebral cortex development) + +AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") "The progression of the cerebral cortex over time from its initial formation until its mature state. The cerebral cortex is the outer layered region of the telencephalon.") +AnnotationAssertion(rdfs:label "cerebral cortex development") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (neural plate formation) AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") Annotation( "ISBN:0878932437") Annotation( "ISBN:0878932585") Annotation( "PMID:15806586") "The formation of the flat, thickened layer of ectodermal cells known as the neural plate. The underlying dorsal mesoderm signals the ectodermal cells above it to elongate into columnar neural plate cells. The neural plate subsequently develops into the neural tube, which gives rise to the central nervous system.") @@ -19754,6 +24398,49 @@ AnnotationAssertion(rdfs:label "cent EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +# Class: (central nervous system myelination) + +AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") "The process in which neuronal axons and dendrites become coated with a segmented lipid-rich sheath (myelin) to enable faster and more energetically efficient conduction of electrical impulses. The sheath is formed by the cell membranes of oligodendrocytes in the central nervous system. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier.") +AnnotationAssertion(rdfs:label "central nervous system myelination") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectAllValuesFrom( )) + +# Class: (myelination in peripheral nervous system) + +AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") "The process in which neuronal axons and dendrites become coated with a segmented lipid-rich sheath (myelin) to enable faster and more energetically efficient conduction of electrical impulses. The sheath is formed by the cell membranes of Schwann cells in the peripheral nervous system. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier.") +AnnotationAssertion(rdfs:label "myelination in peripheral nervous system") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (telencephalon cell migration) + +AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:curators") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") "The orderly movement of a cell from one site to another at least one of which is located in the telencephalon.") +AnnotationAssertion(rdfs:label "telencephalon cell migration") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (telencephalon glial cell migration) + +AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") "The orderly movement of glial cells through the telencephalon.") +AnnotationAssertion(rdfs:label "telencephalon glial cell migration") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) + +# Class: (telencephalon oligodendrocyte cell migration) + +AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") "The multiplication or reproduction of telencephalon oligodendrocyte cells, resulting in the expansion of a cell population.") +AnnotationAssertion(rdfs:label "telencephalon oligodendrocyte cell migration") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) + # Class: (rhombomere cell migration) AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GO_REF:0000021") Annotation( "PMID:15629700") "The movement of a cell within a rhombomere. This process is known to occur as an early step in the generation of anatomical structure from a rhombomere.") @@ -19889,6 +24576,14 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (cytosolic ribosome) + +AnnotationAssertion(Annotation( "GOC:mtg_sensu") "A ribosome located in the cytosol.") +AnnotationAssertion(rdfs:label "cytosolic ribosome") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectAllValuesFrom( )) + # Class: (transmembrane transporter activity) AnnotationAssertion(Annotation( "GOC:jid") Annotation( "GOC:mtg_transport") Annotation( "ISBN:0815340729") "Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other.") @@ -20188,6 +24883,14 @@ AnnotationAssertion( "hyaluronan catabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +# Class: (keratinocyte differentiation) + +AnnotationAssertion(Annotation( "GOC:dph") Annotation( "GOC:mah") Annotation( "GOC:sdb_2009") Annotation( "GOC:tb") "The process in which a relatively unspecialized cell acquires specialized features of a keratinocyte.") +AnnotationAssertion(rdfs:label "keratinocyte differentiation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (T cell differentiation) AnnotationAssertion(Annotation( "GOC:jid") Annotation( "GOC:mah") Annotation( "GO_REF:0000022") "The process in which a precursor cell type acquires characteristics of a more mature T-cell. A T cell is a type of lymphocyte whose definin characteristic is the expression of a T cell receptor complex.") @@ -20213,6 +24916,13 @@ AnnotationAssertion(rdfs:label "mega EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +# Class: (neutrophil differentiation) + +AnnotationAssertion(Annotation( "GOC:mah") "The process in which a myeloid precursor cell acquires the specialized features of a neutrophil.") +AnnotationAssertion(rdfs:label "neutrophil differentiation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) + # Class: (monocyte differentiation) AnnotationAssertion(Annotation( "GOC:mah") "The process in which a relatively unspecialized myeloid precursor cell acquires the specialized features of a monocyte.") @@ -20310,6 +25020,13 @@ AnnotationAssertion(rdfs:label "oste EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +# Class: (melanocyte differentiation) + +AnnotationAssertion(Annotation( "GOC:mah") "The process in which a relatively unspecialized cell acquires specialized features of a melanocyte.") +AnnotationAssertion(rdfs:label "melanocyte differentiation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) + # Class: (respiratory tube development) AnnotationAssertion(Annotation( "GOC:jid") "The process whose specific outcome is the progression of the respiratory tube over time, from its formation to the mature structure. The respiratory tube is assumed to mean any tube in the respiratory tract.") @@ -20371,6 +25088,14 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (axon) + +AnnotationAssertion(Annotation( "GOC:nln") Annotation( "ISBN:0198506732") "The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter.") +AnnotationAssertion( "NIF_Subcellular:sao1770195789") +AnnotationAssertion( "Wikipedia:Axon") +AnnotationAssertion(rdfs:label "axon") +SubClassOf( ) + # Class: (peristalsis) AnnotationAssertion(Annotation( "ISBN:0198506732") "A wavelike sequence of involuntary muscular contraction and relaxation that passes along a tubelike structure, such as the intestine, impelling the contents onwards.") @@ -20403,6 +25128,12 @@ AnnotationAssertion(Annotation( "collagen catabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +# Class: (neutrophil chemotaxis) + +AnnotationAssertion(Annotation( "GOC:jl") Annotation( "ISBN:0198506732") "The directed movement of a neutrophil cell, the most numerous polymorphonuclear leukocyte found in the blood, in response to an external stimulus, usually an infection or wounding.") +AnnotationAssertion(rdfs:label "neutrophil chemotaxis") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + # Class: (leukocyte chemotaxis) AnnotationAssertion(Annotation( "GOC:add") Annotation( "GOC:jl") "The movement of a leukocyte in response to an external stimulus.") @@ -20433,6 +25164,14 @@ AnnotationAssertion(rdfs:label "Golg EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (chitosome membrane) + +AnnotationAssertion(Annotation( "GOC:mah") "The lipid bilayer surrounding a chitosome.") +AnnotationAssertion(rdfs:label "chitosome membrane") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (secretory granule membrane) AnnotationAssertion(Annotation( "GOC:mah") "The lipid bilayer surrounding a secretory granule.") @@ -20532,6 +25271,15 @@ AnnotationAssertion(Annotation( "positive regulation of myeloid dendritic cell activation") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +# Class: (forebrain development) + +AnnotationAssertion(Annotation( "PMID:4975589") Annotation( "PMID:4992177") "The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions).") +AnnotationAssertion(rdfs:label "forebrain development") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (midbrain development) AnnotationAssertion(Annotation( "PMID:4975589") Annotation( "PMID:4992177") "The process whose specific outcome is the progression of the midbrain over time, from its formation to the mature structure. The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles).") @@ -20557,6 +25305,24 @@ AnnotationAssertion(rdfs:label "noto EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +# Class: (olfactory placode formation) + +AnnotationAssertion(Annotation( "GOC:dgh") "The formation of a thickening of the neural ectoderm in the head region of the vertebrate embryo which develops into the olfactory region of the nasal cavity.") +AnnotationAssertion(rdfs:label "olfactory placode formation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (otic vesicle formation) + +AnnotationAssertion(Annotation( "GOC:dgh") "The process resulting in the transition of the otic placode into the otic vesicle, a transient embryonic structure formed during development of the vertebrate inner ear.") +AnnotationAssertion(rdfs:label "otic vesicle formation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (midbrain-hindbrain boundary development) AnnotationAssertion(Annotation( "GOC:dgh") "The process whose specific outcome is the progression of the midbrain-hindbrain boundary over time, from its formation to the mature structure. The midbrain-hindbrain domain of the embryonic brain is comprised of the mesencephalic vesicle and the first rhombencephalic vesicle at early somitogenesis stages.") @@ -20818,93 +25584,6 @@ AnnotationAssertion(Annotation( "positive regulation of pseudopodium assembly") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -# Class: (regulation of cellular metabolic process) - -AnnotationAssertion(Annotation( "GOC:mah") "Any process that modulates the frequency, rate or extent of the chemical reactions and pathways by which individual cells transform chemical substances.") -AnnotationAssertion(rdfs:comment "Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC.") -AnnotationAssertion(rdfs:label "regulation of cellular metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) - -# Class: (negative regulation of cellular metabolic process) - -AnnotationAssertion(Annotation( "GOC:mah") "Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways by which individual cells transform chemical substances.") -AnnotationAssertion(rdfs:comment "Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC.") -AnnotationAssertion(rdfs:label "negative regulation of cellular metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) - -# Class: (positive regulation of cellular metabolic process) - -AnnotationAssertion(Annotation( "GOC:mah") "Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways by which individual cells transform chemical substances.") -AnnotationAssertion(rdfs:comment "Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC.") -AnnotationAssertion(rdfs:label "positive regulation of cellular metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) - -# Class: (regulation of cellular biosynthetic process) - -AnnotationAssertion(Annotation( "GOC:mah") "Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of substances, carried out by individual cells.") -AnnotationAssertion(rdfs:comment "Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC.") -AnnotationAssertion(rdfs:label "regulation of cellular biosynthetic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) - -# Class: (negative regulation of cellular biosynthetic process) - -AnnotationAssertion(Annotation( "GOC:mah") "Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of substances, carried out by individual cells.") -AnnotationAssertion(rdfs:comment "Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC.") -AnnotationAssertion(rdfs:label "negative regulation of cellular biosynthetic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) - -# Class: (positive regulation of cellular biosynthetic process) - -AnnotationAssertion(Annotation( "GOC:mah") "Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of substances, carried out by individual cells.") -AnnotationAssertion(rdfs:comment "Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC.") -AnnotationAssertion(rdfs:label "positive regulation of cellular biosynthetic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) - -# Class: (regulation of cellular catabolic process) - -AnnotationAssertion(Annotation( "GOC:mah") "Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of substances, carried out by individual cells.") -AnnotationAssertion(rdfs:comment "Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC.") -AnnotationAssertion(rdfs:label "regulation of cellular catabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) - -# Class: (negative regulation of cellular catabolic process) - -AnnotationAssertion(Annotation( "GOC:mah") "Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of substances, carried out by individual cells.") -AnnotationAssertion(rdfs:comment "Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC.") -AnnotationAssertion(rdfs:label "negative regulation of cellular catabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) - -# Class: (positive regulation of cellular catabolic process) - -AnnotationAssertion(Annotation( "GOC:mah") "Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of substances, carried out by individual cells.") -AnnotationAssertion(rdfs:comment "Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC.") -AnnotationAssertion(rdfs:label "positive regulation of cellular catabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) - # Class: (negative regulation of protein-containing complex assembly) AnnotationAssertion(Annotation( "GOC:mah") "Any process that stops, prevents, or reduces the frequency, rate or extent of protein complex assembly.") @@ -21017,6 +25696,29 @@ AnnotationAssertion(rdfs:label "neur EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +# Class: (regulation of myelination) + +AnnotationAssertion(Annotation( "GOC:mah") "Any process that modulates the frequency, rate or extent of the formation of a myelin sheath around nerve axons.") +AnnotationAssertion(rdfs:label "regulation of myelination") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (negative regulation of myelination) + +AnnotationAssertion(Annotation( "GOC:mah") "Any process that stops, prevents, or reduces the frequency, rate or extent of the formation of a myelin sheath around nerve axons.") +AnnotationAssertion(rdfs:label "negative regulation of myelination") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) + +# Class: (positive regulation of myelination) + +AnnotationAssertion(Annotation( "GOC:mah") "Any process that activates or increases the frequency, rate or extent of the formation of a myelin sheath around nerve axons.") +AnnotationAssertion(rdfs:label "positive regulation of myelination") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectAllValuesFrom( )) + # Class: (regulation of nervous system process) AnnotationAssertion(Annotation( "GOC:dph") Annotation( "GOC:mah") Annotation( "GOC:tb") "Any process that modulates the frequency, rate or extent of a neurophysiological process, an organ system process carried out by any of the organs or tissues of the nervous system.") @@ -21126,47 +25828,11 @@ AnnotationAssertion(Annotation( "bleb assembly") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -# Class: (regulation of nuclease activity) - -AnnotationAssertion(Annotation( "GOC:mah") "Any process that modulates the frequency, rate or extent of nuclease activity, the hydrolysis of ester linkages within nucleic acids.") -AnnotationAssertion(rdfs:label "regulation of nuclease activity") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (regulation of deoxyribonuclease activity) - -AnnotationAssertion(Annotation( "GOC:mah") "Any process that modulates the frequency, rate or extent of deoxyribonuclease activity, the hydrolysis of ester linkages within deoxyribonucleic acid.") -AnnotationAssertion(rdfs:label "regulation of deoxyribonuclease activity") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) - -# Class: (negative regulation of nuclease activity) - -AnnotationAssertion(Annotation( "GOC:mah") "Any process that stops or reduces the rate of nuclease activity, the hydrolysis of ester linkages within nucleic acids.") -AnnotationAssertion(rdfs:label "negative regulation of nuclease activity") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (positive regulation of nuclease activity) +# Class: (maintenance of protein location in cell cortex) -AnnotationAssertion(Annotation( "GOC:mah") "Any process that activates or increases the frequency, rate or extent of nuclease activity, the hydrolysis of ester linkages within nucleic acids.") -AnnotationAssertion(rdfs:label "positive regulation of nuclease activity") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (negative regulation of deoxyribonuclease activity) - -AnnotationAssertion(Annotation( "GOC:mah") "Any process that stops or reduces the rate of deoxyribonuclease activity, the hydrolysis of ester linkages within deoxyribonucleic acid.") -AnnotationAssertion(rdfs:label "negative regulation of deoxyribonuclease activity") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) - -# Class: (positive regulation of deoxyribonuclease activity) - -AnnotationAssertion(Annotation( "GOC:mah") "Any process that activates or increases the frequency, rate or extent of deoxyribonuclease activity, the hydrolysis of ester linkages within deoxyribonucleic acid.") -AnnotationAssertion(rdfs:label "positive regulation of deoxyribonuclease activity") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +AnnotationAssertion(Annotation( "GOC:vw") "A process in which a protein or protein complex is maintained in a specific location in the cell cortex.") +AnnotationAssertion(rdfs:label "maintenance of protein location in cell cortex") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) # Class: (regulation of response to external stimulus) @@ -21201,6 +25867,24 @@ AnnotationAssertion(rdfs:label "dens EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (regulation of synaptic transmission, GABAergic) + +AnnotationAssertion(Annotation( "GOC:mah") "Any process that modulates the frequency, rate or extent of GABAergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter gamma-aminobutyric acid (GABA).") +AnnotationAssertion(rdfs:label "regulation of synaptic transmission, GABAergic") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (negative regulation of synaptic transmission, GABAergic) + +AnnotationAssertion(Annotation( "GOC:mah") "Any process that stops, prevents, or reduces the frequency, rate or extent of GABAergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter gamma-aminobutyric acid (GABA).") +AnnotationAssertion(rdfs:label "negative regulation of synaptic transmission, GABAergic") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (positive regulation of synaptic transmission, GABAergic) + +AnnotationAssertion(Annotation( "GOC:mah") "Any process that activates, maintains or increases the frequency, rate or extent of GABAergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter gamma-aminobutyric acid (GABA).") +AnnotationAssertion(rdfs:label "positive regulation of synaptic transmission, GABAergic") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + # Class: (regulation of actin filament bundle assembly) AnnotationAssertion(Annotation( "GOC:mah") "Any process that modulates the frequency, rate or extent of the assembly of actin filament bundles.") @@ -21223,24 +25907,6 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (regulation of nucleobase-containing compound transport) - -AnnotationAssertion(Annotation( "GOC:mah") "Any process that modulates the frequency, rate or extent of the directed movement of nucleobases, nucleosides, nucleotides and nucleic acids, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.") -AnnotationAssertion(rdfs:label "regulation of nucleobase-containing compound transport") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) - -# Class: (negative regulation of nucleobase-containing compound transport) - -AnnotationAssertion(Annotation( "GOC:mah") "Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of nucleobases, nucleosides, nucleotides and nucleic acids, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.") -AnnotationAssertion(rdfs:label "negative regulation of nucleobase-containing compound transport") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) - -# Class: (positive regulation of nucleobase-containing compound transport) - -AnnotationAssertion(Annotation( "GOC:mah") "Any process that activates or increases the frequency, rate or extent of the directed movement of nucleobases, nucleosides, nucleotides and nucleic acids, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.") -AnnotationAssertion(rdfs:label "positive regulation of nucleobase-containing compound transport") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) - # Class: (secretory granule localization) AnnotationAssertion(Annotation( "GOC:mah") "Any process in which a secretory granule is transported to, and/or maintained in, a specific location within the cell.") @@ -21271,6 +25937,48 @@ AnnotationAssertion(Annotation( "positive regulation of protein polymerization") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +# Class: (myelin assembly) + +AnnotationAssertion(Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:tb") "The process in which the wraps of cell membrane that constitute myelin are laid down around an axon in the central or peripheral nervous system.") +AnnotationAssertion(rdfs:label "myelin assembly") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (central nervous system myelin formation) + +AnnotationAssertion(Annotation( "GOC:dgh") "The process in which the wraps of cell membrane that constitute myelin are laid down around an axon by an oligodendrocyte in the central nervous system.") +AnnotationAssertion(rdfs:label "central nervous system myelin formation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectAllValuesFrom( )) + +# Class: (peripheral nervous system myelin formation) + +AnnotationAssertion(Annotation( "GOC:dgh") "The process in which the wraps of cell membrane that constitute myelin are laid down around an axon by Schwann cells in the peripheral nervous system.") +AnnotationAssertion(rdfs:label "peripheral nervous system myelin formation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (axon ensheathment in central nervous system) + +AnnotationAssertion(Annotation( "GOC:dgh") "The process in which a glial cell membrane closes around an axon in the central nervous system. This can be a myelinating or a non-myelinating neuron-glial interaction.") +AnnotationAssertion(rdfs:label "axon ensheathment in central nervous system") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectAllValuesFrom( )) + +# Class: (peripheral nervous system axon ensheathment) + +AnnotationAssertion(Annotation( "GOC:dgh") "The process in which a Schwann cell membrane closes around an axon in the peripheral nervous system. This can be a myelinating or a non-myelinating neuron-glial interaction.") +AnnotationAssertion(rdfs:label "peripheral nervous system axon ensheathment") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) + # Class: (regulation of chondrocyte differentiation) AnnotationAssertion(Annotation( "GOC:mah") "Any process that modulates the frequency, rate or extent of chondrocyte differentiation.") @@ -21371,6 +26079,26 @@ AnnotationAssertion(Annotation( "positive regulation of intracellular transport") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +# Class: (melanosome localization) + +AnnotationAssertion(Annotation( "GOC:ln") "Any process in which a melanosome is transported to, and/or maintained in, a specific location within the cell.") +AnnotationAssertion(rdfs:label "melanosome localization") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (establishment of melanosome localization) + +AnnotationAssertion(Annotation( "GOC:mah") "The directed movement of a melanosome to a specific location.") +AnnotationAssertion(rdfs:label "establishment of melanosome localization") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (melanosome transport) + +AnnotationAssertion(Annotation( "GOC:ln") "The directed movement of melanosomes into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.") +AnnotationAssertion(rdfs:label "melanosome transport") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) + # Class: (regulation of transporter activity) AnnotationAssertion(Annotation( "GOC:mah") "Any process that modulates the activity of a transporter.") @@ -21426,6 +26154,12 @@ SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (melanosome organization) + +AnnotationAssertion(Annotation( "GOC:vk") "A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a melanosome. A melanosome is a tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored.") +AnnotationAssertion(rdfs:label "melanosome organization") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + # Class: (multicellular organismal process) AnnotationAssertion(Annotation( "GOC:curators") Annotation( "GOC:dph") Annotation( "GOC:isa_complete") Annotation( "GOC:tb") "Any biological process, occurring at the level of a multicellular organism, pertinent to its function.") @@ -21451,6 +26185,16 @@ AnnotationAssertion(Annotation( "developmental process") SubClassOf( ) +# Class: (maintenance of protein location in cell) + +AnnotationAssertion(Annotation( "GOC:isa_complete") Annotation( "GOC:mah") "Any process in which a protein is maintained in a specific location within, or in the membrane of, a cell, and is prevented from moving elsewhere.") +AnnotationAssertion(rdfs:label "maintenance of protein location in cell") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectAllValuesFrom( )) + # Class: (microvillus organization) AnnotationAssertion(Annotation( "GOC:mah") "A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a microvillus, a thin cylindrical membrane-covered projection on the surface of a cell.") @@ -21698,6 +26442,34 @@ AnnotationAssertion(Annotation( "regulation of actin filament-based process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +# Class: (amino acid export across plasma membrane) + +AnnotationAssertion(Annotation( "GOC:jl") "The directed movement of amino acids from inside of a cell, across the plasma membrane and into the extracellular region.") +AnnotationAssertion(rdfs:label "amino acid export across plasma membrane") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) + +# Class: (amino acid transmembrane export from vacuole) + +AnnotationAssertion(Annotation( "GOC:mah") "The directed movement of amino acids out of the vacuole, across the vacuolar membrane.") +AnnotationAssertion(rdfs:label "amino acid transmembrane export from vacuole") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) + +# Class: (amino acid transmembrane import into vacuole) + +AnnotationAssertion(Annotation( "GOC:mah") "The directed movement of amino acids into the vacuole across the vacuolar membrane.") +AnnotationAssertion(rdfs:label "amino acid transmembrane import into vacuole") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) + +# Class: (keratinocyte activation) + +AnnotationAssertion(Annotation( "GOC:mah") Annotation( "PMID:15737202") "A change in the morphology or behavior of a keratinocyte resulting from exposure to an activating factor such as a cellular or soluble ligand. Upon activation, keratinocytes become migratory and hyperproliferative, and produce growth factors and cytokines.") +AnnotationAssertion(rdfs:label "keratinocyte activation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) +SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) +DisjointClasses( ObjectSomeValuesFrom( )) + # Class: (protein-containing complex disassembly) AnnotationAssertion(Annotation( "GOC:mah") "The disaggregation of a protein-containing macromolecular complex into its constituent components.") @@ -21705,13 +26477,6 @@ AnnotationAssertion(rdfs:label "prot EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -# Class: (protein-DNA complex disassembly) - -AnnotationAssertion(Annotation( "GOC:mah") "The disaggregation of a protein-DNA complex into its constituent components.") -AnnotationAssertion(rdfs:label "protein-DNA complex disassembly") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) - # Class: (protein-RNA complex disassembly) AnnotationAssertion(Annotation( "GOC:mah") "The disaggregation of a protein-RNA complex into its constituent components.") @@ -21734,15 +26499,6 @@ SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) -# Class: (protein-DNA complex) - -AnnotationAssertion(Annotation( "GOC:mah") "A macromolecular complex containing both protein and DNA molecules.") -AnnotationAssertion(rdfs:comment "Note that this term is intended to classify complexes that have DNA as one of the members of the complex, that is, the complex does not exist if DNA is not present. Protein complexes that interact with DNA e.g. transcription factor complexes should not be classified here.") -AnnotationAssertion(rdfs:label "protein-DNA complex") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (Fc receptor complex) AnnotationAssertion(Annotation( "GOC:add") Annotation( "ISBN:0781735149") "A protein complex composed of a subunit or subunits capable of binding the Fc portion of an immunoglobulin with additional signaling components. The complex functions as a receptor for immunoglobulin.") @@ -21770,6 +26526,26 @@ AnnotationAssertion(rdfs:label "myel EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +# Class: (regulation of neutrophil apoptotic process) + +AnnotationAssertion(Annotation( "GOC:add") Annotation( "GOC:mtg_apoptosis") "Any process that modulates the frequency, rate, or extent of neutrophil apoptotic process.") +AnnotationAssertion(rdfs:label "regulation of neutrophil apoptotic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (negative regulation of neutrophil apoptotic process) + +AnnotationAssertion(Annotation( "GOC:add") Annotation( "GOC:mtg_apoptosis") "Any process that stops, prevents, or reduces the frequency, rate, or extent of neutrophil apoptotic process.") +AnnotationAssertion(rdfs:label "negative regulation of neutrophil apoptotic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (positive regulation of neutrophil apoptotic process) + +AnnotationAssertion(Annotation( "GOC:add") Annotation( "GOC:mtg_apoptosis") "Any process that activates or increases the frequency, rate, or extent of neutrophil apoptotic process.") +AnnotationAssertion(rdfs:label "positive regulation of neutrophil apoptotic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (regulation of myeloid cell apoptotic process) AnnotationAssertion(Annotation( "GOC:add") Annotation( "GOC:mtg_apoptosis") "Any process that modulates the frequency, rate, or extent of myeloid cell apoptotic process.") @@ -21852,6 +26628,15 @@ AnnotationAssertion(rdfs:label "regu EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (melanosome membrane) + +AnnotationAssertion(Annotation( "GOC:mah") "The lipid bilayer surrounding a melanosome.") +AnnotationAssertion(rdfs:label "melanosome membrane") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (regulation of amine metabolic process) AnnotationAssertion(Annotation( "GOC:mah") "Any process that modulates the frequency, rate or extent of the chemical reactions and pathways by which individual cells transform amines.") @@ -22127,6 +26912,13 @@ AnnotationAssertion(rdfs:comment "No AnnotationAssertion(rdfs:label "vacuolar transmembrane transport") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +# Class: (vacuolar amino acid transmembrane transport) + +AnnotationAssertion(Annotation( "GOC:mah") "The process in which an amino acid is transported from one side of the vacuolar membrane to the other.") +AnnotationAssertion(rdfs:comment "Note that this term is not intended for use in annotating lateral movement within membranes.") +AnnotationAssertion(rdfs:label "vacuolar amino acid transmembrane transport") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) + # Class: (protein localization to chromosome) AnnotationAssertion(Annotation( "GOC:mah") "Any process in which a protein is transported to, or maintained at, a specific location on a chromosome.") @@ -22139,19 +26931,6 @@ AnnotationAssertion(Annotation( "protein localization to nucleus") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -# Class: (nucleobase-containing compound biosynthetic process) - -AnnotationAssertion(Annotation( "GOC:mah") "The chemical reactions and pathways resulting in the formation of nucleobases, nucleosides, nucleotides and nucleic acids.") -AnnotationAssertion(rdfs:label "nucleobase-containing compound biosynthetic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) - -# Class: (nucleobase-containing compound catabolic process) - -AnnotationAssertion(Annotation( "GOC:mah") "The chemical reactions and pathways resulting in the breakdown of nucleobases, nucleosides, nucleotides and nucleic acids.") -AnnotationAssertion(rdfs:label "nucleobase-containing compound catabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) - # Class: (regulation of transmembrane transport) AnnotationAssertion(Annotation( "GOC:mah") "Any process that modulates the frequency, rate or extent of the directed movement of a solute from one side of a membrane to the other.") @@ -22274,6 +27053,12 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (synaptic transmission, glutamatergic) + +AnnotationAssertion(Annotation( "GOC:dos") "The vesicular release of glutamate from a presynapse, across a chemical synapse, the subsequent activation of glutamate receptors at the postsynapse of a target cell (neuron, muscle, or secretory cell) and the effects of this activation on the postsynaptic membrane potential and ionic composition of the postsynaptic cytosol. This process encompasses both spontaneous and evoked release of neurotransmitter and all parts of synaptic vesicle exocytosis. Evoked transmission starts with the arrival of an action potential at the presynapse.") +AnnotationAssertion(rdfs:label "synaptic transmission, glutamatergic") +SubClassOf( ) + # Class: (internal genitalia morphogenesis) AnnotationAssertion(Annotation( "PMID:24793987") Annotation( "PMID:25247640") "The process in which the anatomical structures of the internal genitalia are generated and organized. The internal genitalia are the internal sex organs such as the uterine tube, the uterus and the vagina in female mammals, and the testis, seminal vesicle, ejaculatory duct and prostate in male mammals.") @@ -22659,6 +27444,13 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (Schwann cell migration) + +AnnotationAssertion(Annotation( "CL:0002573") Annotation( "PMID:20335460") "The orderly movement of a Schwann cell from one site to another. A Schwann cell is a glial cell that ensheathes axons of neuron in the peripheral nervous system and is necessary for their maintenance and function.") +AnnotationAssertion(rdfs:label "Schwann cell migration") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) + # Class: (dendritic cell homeostasis) AnnotationAssertion(Annotation( "CL:0000451") Annotation( "GOC:uh") Annotation( "PMID:12570827") Annotation( "PMID:19176316") "The process of regulating the proliferation and elimination of dendritic cells such that the total number of dendritic cells within a whole or part of an organism is stable over time in the absence of an outside stimulus.") @@ -22966,6 +27758,12 @@ AnnotationAssertion(rdfs:label "endo EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +# Class: (neutrophil activation) + +AnnotationAssertion(Annotation( "GOC:mgi_curators") Annotation( "ISBN:0781735149") "The change in morphology and behavior of a neutrophil resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor.") +AnnotationAssertion(rdfs:label "neutrophil activation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + # Class: (regulation of cell population proliferation) AnnotationAssertion(Annotation( "GOC:jl") "Any process that modulates the frequency, rate or extent of cell proliferation.") @@ -23026,14 +27824,11 @@ AnnotationAssertion(Annotation( "negative regulation of protein catabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -# Class: (cellular ketone metabolic process) +# Class: (ketone metabolic process) AnnotationAssertion(Annotation( "GOC:jl") Annotation( "ISBN:0787650153") "The chemical reactions and pathways involving any of a class of organic compounds that contain the carbonyl group, CO, and in which the carbonyl group is bonded only to carbon atoms, as carried out by individual cells. The general formula for a ketone is RCOR, where R and R are alkyl or aryl groups.") -AnnotationAssertion(rdfs:label "cellular ketone metabolic process") +AnnotationAssertion(rdfs:label "ketone metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) # Class: (ketone biosynthetic process) @@ -23041,7 +27836,6 @@ AnnotationAssertion(Annotation( "ketone biosynthetic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ) # Class: (ketone catabolic process) @@ -23049,7 +27843,6 @@ SubClassOf( "GOC:go_curators") "The chemical reactions and pathways resulting in the breakdown of ketones, a class of organic compounds that contain the carbonyl group, CO, and in which the carbonyl group is bonded only to carbon atoms. The general formula for a ketone is RCOR, where R and R are alkyl or aryl groups.") AnnotationAssertion(rdfs:label "ketone catabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) # Class: (response to chemical) @@ -23074,6 +27867,24 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (regulation of protein import into nucleus) + +AnnotationAssertion(Annotation( "GOC:jl") "Any process that modulates the frequency, rate or extent of movement of proteins from the cytoplasm to the nucleus.") +AnnotationAssertion(rdfs:label "regulation of protein import into nucleus") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (positive regulation of protein import into nucleus) + +AnnotationAssertion(Annotation( "GOC:jl") "Any process that activates or increases the frequency, rate or extent of movement of proteins from the cytoplasm into the nucleus.") +AnnotationAssertion(rdfs:label "positive regulation of protein import into nucleus") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (negative regulation of protein import into nucleus) + +AnnotationAssertion(Annotation( "GOC:jl") "Any process that stops, prevents, or reduces the frequency, rate or extent of the movement of proteins from the cytoplasm into the nucleus.") +AnnotationAssertion(rdfs:label "negative regulation of protein import into nucleus") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + # Class: (taxis) AnnotationAssertion(Annotation( "GOC:jl") Annotation( "ISBN:0192801023") "The directed movement of a motile cell or organism in response to an external stimulus.") @@ -23095,10 +27906,10 @@ AnnotationAssertion(rdfs:label "biog SubClassOf( ) SubClassOf( ) -# Class: (cellular biogenic amine catabolic process) +# Class: (biogenic amine catabolic process) AnnotationAssertion(Annotation( "GOC:go_curators") Annotation( "GOC:jl") Annotation( "ISBN:0198506732") "The chemical reactions and pathways occurring at the level of individual cells resulting in the breakdown of biogenic amines, any of a group of naturally occurring, biologically active amines, such as norepinephrine, histamine, and serotonin, many of which act as neurotransmitters.") -AnnotationAssertion(rdfs:label "cellular biogenic amine catabolic process") +AnnotationAssertion(rdfs:label "biogenic amine catabolic process") SubClassOf( ) # Class: (norepinephrine metabolic process) @@ -23163,7 +27974,6 @@ EquivalentClasses( ObjectIntersection AnnotationAssertion(Annotation( "GOC:jl") Annotation( "GOC:mah") "The chemical reactions and pathways involving compounds that contain an indole (2,3-benzopyrrole) skeleton.") AnnotationAssertion(rdfs:label "indole-containing compound metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) # Class: (indole-containing compound biosynthetic process) @@ -23195,6 +28005,38 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (melanosome) + +AnnotationAssertion(Annotation( "GOC:jl") Annotation( "PMID:11584301") "A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells.") +AnnotationAssertion( "Wikipedia:Melanosome") +AnnotationAssertion(rdfs:label "melanosome") +SubClassOf( ) +SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) +SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) +SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) +SubClassOf( ObjectAllValuesFrom( )) +DisjointClasses( ObjectSomeValuesFrom( )) + +# Class: (ear morphogenesis) + +AnnotationAssertion(Annotation( "GOC:jl") Annotation( "ISBN:0192801023") "The process in which the anatomical structures of the ear are generated and organized. The ear is the sense organ in vertebrates that is specialized for the detection of sound, and the maintenance of balance. Includes the outer ear and middle ear, which collect and transmit sound waves; and the inner ear, which contains the organs of balance and (except in fish) hearing. Also includes the pinna, the visible part of the outer ear, present in some mammals.") +AnnotationAssertion(rdfs:label "ear morphogenesis") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (inner ear morphogenesis) + +AnnotationAssertion(Annotation( "GOC:jl") Annotation( "ISBN:0192801023") "The process in which the anatomical structures of the inner ear are generated and organized. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively.") +AnnotationAssertion(rdfs:label "inner ear morphogenesis") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (regulation of eye photoreceptor cell development) AnnotationAssertion(Annotation( "GOC:jl") "Any process that modulates the frequency, rate or extent of eye photoreceptor development.") @@ -23223,6 +28065,13 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (myelination) + +AnnotationAssertion(Annotation( "GOC:dgh") Annotation( "GOC:mah") "The process in which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier.") +AnnotationAssertion( "Wikipedia:Myelin") +AnnotationAssertion(rdfs:label "myelination") +SubClassOf( ) + # Class: (azurophil granule) AnnotationAssertion(Annotation( "GOC:jl") Annotation( "PMID:17152095") Annotation( "PMID:28717070") Annotation( "PMID:5914694") Annotation( "WIKIPEDIA:Azurophilic_granule") "Primary lysosomal granule readily stainable with a Romanowsky stain.") @@ -23444,6 +28293,14 @@ AnnotationAssertion(Annotation( "peptide biosynthetic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +# Class: (otic placode formation) + +AnnotationAssertion(Annotation( "GOC:go_curators") Annotation( "PMID:12668634") "The initial developmental process that will lead to the formation of the vertebrate inner ear. The otic placode forms as a thickening of the head ectoderm adjacent to the developing hindbrain.") +AnnotationAssertion(rdfs:label "otic placode formation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (extracellular structure organization) AnnotationAssertion(Annotation( "GOC:ai") Annotation( "GOC:dph") Annotation( "GOC:jl") Annotation( "GOC:mah") "A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of structures in the space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane, and also covers the host cell environment outside an intracellular parasite.") @@ -23492,18 +28349,6 @@ AnnotationAssertion(rdfs:label "germ EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -# Class: (positive regulation of catalytic activity) - -AnnotationAssertion(Annotation( "GOC:ebc") Annotation( "GOC:jl") Annotation( "GOC:tb") Annotation( "GOC:vw") "Any process that activates or increases the activity of an enzyme.") -AnnotationAssertion(rdfs:label "positive regulation of catalytic activity") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) - -# Class: (negative regulation of catalytic activity) - -AnnotationAssertion(Annotation( "GOC:ebc") Annotation( "GOC:jl") Annotation( "GOC:tb") Annotation( "GOC:vw") "Any process that stops or reduces the activity of an enzyme.") -AnnotationAssertion(rdfs:label "negative regulation of catalytic activity") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) - # Class: (surfactant homeostasis) AnnotationAssertion(Annotation( "PMID:23708874") Annotation( "PMID:9751757") "Any process involved in the maintenance of a steady-state level of a surface-active agent that maintains the surface tension of a liquid.") @@ -23545,6 +28390,13 @@ AnnotationAssertion(rdfs:label "pept EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +# Class: (response to amino acid) + +AnnotationAssertion(Annotation( "GOC:ef") Annotation( "GOC:mlg") "Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amino acid stimulus. An amino acid is a carboxylic acids containing one or more amino groups.") +AnnotationAssertion(rdfs:label "response to amino acid") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) + # Class: (response to external biotic stimulus) AnnotationAssertion(Annotation( "GOC:go_curators") "Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an external biotic stimulus, an external stimulus caused by, or produced by living things.") @@ -23552,6 +28404,19 @@ AnnotationAssertion(rdfs:label "resp SubClassOf( ) SubClassOf( ) +# Class: (myelin sheath) + +AnnotationAssertion(Annotation( "GOC:cjm") Annotation( "GOC:jl") Annotation( "NIF_Subcellular:sao593830697") Annotation( "Wikipedia:Myelin") "An electrically insulating fatty layer that surrounds the axons of many neurons. It is an outgrowth of glial cells: Schwann cells supply the myelin for peripheral neurons while oligodendrocytes supply it to those of the central nervous system.") +AnnotationAssertion( "FMA:62983") +AnnotationAssertion( "NIF_Subcellular:sao593830697") +AnnotationAssertion( "Wikipedia:Myelin") +AnnotationAssertion(rdfs:label "myelin sheath") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectAllValuesFrom( )) + # Class: (organelle) AnnotationAssertion(Annotation( "GOC:go_curators") "Organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton, and prokaryotic structures such as anammoxosomes and pirellulosomes. Excludes the plasma membrane.") @@ -23569,11 +28434,11 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) DisjointClasses( ) -# Class: (non-membrane-bounded organelle) +# Class: (membraneless organelle) AnnotationAssertion(Annotation( "GOC:go_curators") "Organized structure of distinctive morphology and function, not bounded by a lipid bilayer membrane. Includes ribosomes, the cytoskeleton and chromosomes.") AnnotationAssertion( "NIF_Subcellular:sao1456184038") -AnnotationAssertion(rdfs:label "non-membrane-bounded organelle") +AnnotationAssertion(rdfs:label "membraneless organelle") SubClassOf( ) # Class: (intracellular organelle) @@ -23598,10 +28463,10 @@ AnnotationAssertion(rdfs:label "intr EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -# Class: (intracellular non-membrane-bounded organelle) +# Class: (intracellular membraneless organelle) AnnotationAssertion(Annotation( "GOC:go_curators") "Organized structure of distinctive morphology and function, not bounded by a lipid bilayer membrane and occurring within the cell. Includes ribosomes, the cytoskeleton and chromosomes.") -AnnotationAssertion(rdfs:label "intracellular non-membrane-bounded organelle") +AnnotationAssertion(rdfs:label "intracellular membraneless organelle") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) # Class: (organelle lumen) @@ -23651,10 +28516,10 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) -# Class: (extracellular non-membrane-bounded organelle) +# Class: (extracellular membraneless organelle) AnnotationAssertion(Annotation( "GOC:jl") "Organized structure of distinctive morphology and function, not bounded by a lipid bilayer membrane and occurring outside the cell.") -AnnotationAssertion(rdfs:label "extracellular non-membrane-bounded organelle") +AnnotationAssertion(rdfs:label "extracellular membraneless organelle") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) # Class: (regulation of monoatomic ion transport) @@ -23721,7 +28586,7 @@ SubClassOf( "GOC:jl") "Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of precursor metabolites, substances from which energy is derived, and the processes involved in the liberation of energy from these substances.") AnnotationAssertion(rdfs:label "regulation of generation of precursor metabolites and energy") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) # Class: (regulation of carbohydrate catabolic process) @@ -23815,6 +28680,44 @@ AnnotationAssertion(rdfs:label "regu EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +# Class: (ear development) + +AnnotationAssertion(Annotation( "GOC:jl") Annotation( "ISBN:0192801023") "The process whose specific outcome is the progression of the ear over time, from its formation to the mature structure. The ear is the sense organ in vertebrates that is specialized for the detection of sound, and the maintenance of balance. Includes the outer ear and middle ear, which collect and transmit sound waves; and the inner ear, which contains the organs of balance and (except in fish) hearing. Also includes the pinna, the visible part of the outer ear, present in some mammals.") +AnnotationAssertion(rdfs:label "ear development") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) + +# Class: (nose development) + +AnnotationAssertion(Annotation( "GOC:jl") "The process whose specific outcome is the progression of the nose over time, from its formation to the mature structure. The nose is the specialized structure of the face that serves as the organ of the sense of smell and as part of the respiratory system. Includes the nasi externus (external nose) and cavitas nasi (nasal cavity).") +AnnotationAssertion(rdfs:label "nose development") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (nose morphogenesis) + +AnnotationAssertion(Annotation( "GOC:jl") "The process in which the anatomical structures of the nose are generated and organized. The nose is the specialized structure of the face that serves as the organ of the sense of smell and as part of the respiratory system. Includes the nasi externus (external nose) and cavitas nasi (nasal cavity).") +AnnotationAssertion(rdfs:label "nose morphogenesis") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (tongue development) + +AnnotationAssertion(Annotation( "GOC:jl") Annotation( "UBERON:0001723") "The process whose specific outcome is the progression of the tongue over time, from its formation to the mature structure. The tongue is the movable, muscular organ on the floor of the mouth of most vertebrates, in many other mammals is the principal organ of taste, aids in the prehension of food, in swallowing, and in modifying the voice as in speech.") +AnnotationAssertion(rdfs:label "tongue development") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) + +# Class: (tongue morphogenesis) + +AnnotationAssertion(Annotation( "GOC:jl") Annotation( "UBERON:0001723") "The process in which the anatomical structures of the tongue are generated and organized. The tongue is the movable, muscular organ on the floor of the mouth of most vertebrates, in man other mammals is the principal organ of taste, aids in the prehension of food, in swallowing, and in modifying the voice as in speech.") +AnnotationAssertion(rdfs:label "tongue morphogenesis") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (skin development) AnnotationAssertion(Annotation( "GOC:jl") Annotation( "UBERON:0002097") "The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue.") @@ -23856,6 +28759,35 @@ AnnotationAssertion(Annotation( "amide catabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +# Class: (keratinocyte proliferation) + +AnnotationAssertion(Annotation( "CL:0000311") "The multiplication or reproduction of keratinocytes, resulting in the expansion of a cell population. Keratinocytes are epidermal cells which synthesize keratin and undergo a characteristic change as they move upward from the basal layers of the epidermis to the cornified (horny) layer of the skin.") +AnnotationAssertion(rdfs:label "keratinocyte proliferation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) +SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) +DisjointClasses( ObjectSomeValuesFrom( )) + +# Class: (dicarboxylic acid metabolic process) + +AnnotationAssertion(Annotation( "ISBN:0198506732") "The chemical reactions and pathways involving dicarboxylic acids, any organic acid containing two carboxyl (COOH) groups or anions (COO-).") +AnnotationAssertion(rdfs:label "dicarboxylic acid metabolic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) + +# Class: (dicarboxylic acid catabolic process) + +AnnotationAssertion(Annotation( "ISBN:0198506732") "The chemical reactions and pathways resulting in the breakdown of dicarboxylic acids, any organic acid containing two carboxyl (-COOH) groups.") +AnnotationAssertion(rdfs:label "dicarboxylic acid catabolic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (dicarboxylic acid biosynthetic process) + +AnnotationAssertion(Annotation( "ISBN:0198506732") "The chemical reactions and pathways resulting in the formation of dicarboxylic acids, any organic acid containing two carboxyl (-COOH) groups.") +AnnotationAssertion(rdfs:label "dicarboxylic acid biosynthetic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + # Class: (ossification involved in bone maturation) AnnotationAssertion(Annotation( "GOC:dph") Annotation( "GOC:mah") Annotation( "GOC:mtg_mpo") "The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone, involved in the progression of the skeleton from its formation to its mature state.") @@ -23975,14 +28907,6 @@ AnnotationAssertion(rdfs:label "tran SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (cellular metabolic process) - -AnnotationAssertion(Annotation( "GOC:go_curators") "The chemical reactions and pathways by which individual cells transform chemical substances.") -AnnotationAssertion(rdfs:comment "This term should not be used for direct annotation. It should be possible to make a more specific annotation to one of the children of this term.") -AnnotationAssertion(rdfs:label "cellular metabolic process") -SubClassOf( ) -SubClassOf( ) - # Class: (primary metabolic process) AnnotationAssertion(Annotation( "GOC:go_curators") "The chemical reactions and pathways involving those compounds which are formed as a part of the normal anabolic and catabolic processes. These processes take place in most, if not all, cells of the organism.") @@ -23994,16 +28918,8 @@ SubClassOf( "GOC:jl") "The chemical reactions and pathways resulting in the breakdown of substances, carried out by individual cells.") AnnotationAssertion(rdfs:label "cellular catabolic process") +SubClassOf( ) SubClassOf( ) -SubClassOf( ) - -# Class: (cellular biosynthetic process) - -AnnotationAssertion(Annotation( "GOC:jl") "The chemical reactions and pathways resulting in the formation of substances, carried out by individual cells.") -AnnotationAssertion(rdfs:comment "This term should not be used for direct annotation. It should be possible to make a more specific annotation to one of the children of this term.") -AnnotationAssertion(rdfs:label "cellular biosynthetic process") -SubClassOf( ) -SubClassOf( ) # Class: (intestinal lipid catabolic process) @@ -24108,6 +29024,12 @@ AnnotationAssertion(Annotation( "multi-multicellular organism process") SubClassOf( ) +# Class: (protein transmembrane import into intracellular organelle) + +AnnotationAssertion(Annotation( "GOC:jl") "The directed movement of proteins into an intracellular organelle, across a membrane.") +AnnotationAssertion(rdfs:label "protein transmembrane import into intracellular organelle") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) + # Class: (cilium organization) AnnotationAssertion(Annotation( "GOC:cilia") Annotation( "GOC:jl") "A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a cilium, a specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole.") @@ -24139,6 +29061,12 @@ AnnotationAssertion(rdfs:label "lipo EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +# Class: (chitosome) + +AnnotationAssertion(Annotation( "ISBN:0198506732") Annotation( "PMID:8970154") "An intracellular membrane-bounded particle found in fungi and containing chitin synthase; it synthesizes chitin microfibrils. Chitin synthase activity exists in chitosomes and they are proposed to act as a reservoir for regulated transport of chitin synthase enzymes to the division septum.") +AnnotationAssertion(rdfs:label "chitosome") +SubClassOf( ) + # Class: (plasma membrane fusion) AnnotationAssertion(Annotation( "GOC:elh") Annotation( "GOC:mtg_muscle") "The joining of the lipid bilayer membrane that surround a cell with that of another cell, producing a single cell.") @@ -24146,6 +29074,44 @@ AnnotationAssertion(rdfs:label "plas EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +# Class: (keratin filament) + +AnnotationAssertion(Annotation( "ISBN:0716731363") "A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins.") +AnnotationAssertion(rdfs:label "keratin filament") +SubClassOf( ) + +# Class: (intermediate filament-based process) + +AnnotationAssertion(Annotation( "GOC:ai") "Any cellular process that depends upon or alters the intermediate filament cytoskeleton, that part of the cytoskeleton comprising intermediate filaments and their associated proteins.") +AnnotationAssertion(rdfs:label "intermediate filament-based process") +SubClassOf( ) + +# Class: (intermediate filament cytoskeleton organization) + +AnnotationAssertion(Annotation( "GOC:ai") "A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising intermediate filaments and their associated proteins.") +AnnotationAssertion(rdfs:label "intermediate filament cytoskeleton organization") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) + +# Class: (intermediate filament organization) + +AnnotationAssertion(Annotation( "GOC:ai") "Control of the spatial distribution of intermediate filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking.") +AnnotationAssertion(rdfs:label "intermediate filament organization") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) + +# Class: (intermediate filament bundle assembly) + +AnnotationAssertion(Annotation( "ISBN:0716731363") "The formation of the bundles of intermediate filaments. Intermediate filament-associated proteins (IFAPs) cross-link intermediate filaments with one another, forming a bundle or a network, and with other cell structures, including the plasma membrane. The organization of intermediate filaments and their supportive function in various cells types depends in large part on their linkage to other cell structures via IFAPs.") +AnnotationAssertion(rdfs:label "intermediate filament bundle assembly") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (intermediate filament cytoskeleton) + +AnnotationAssertion(Annotation( "ISBN:0716731363") "Cytoskeletal structure made from intermediate filaments, typically organized in the cytosol as an extended system that stretches from the nuclear envelope to the plasma membrane. Some intermediate filaments run parallel to the cell surface, while others traverse the cytosol; together they form an internal framework that helps support the shape and resilience of the cell.") +AnnotationAssertion(rdfs:label "intermediate filament cytoskeleton") +SubClassOf( ) + # Class: (regulation of bone resorption) AnnotationAssertion(Annotation( "GOC:ai") "Any process that modulates the frequency, rate or extent of bone tissue loss (resorption).") @@ -24188,6 +29154,13 @@ AnnotationAssertion(rdfs:label "esta EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +# Class: (maintenance of protein location) + +AnnotationAssertion(Annotation( "GOC:bf") "Any process in which a protein is maintained in a location and prevented from moving elsewhere. These include sequestration, stabilization to prevent transport elsewhere and the active retrieval of proteins that do move away.") +AnnotationAssertion(rdfs:label "maintenance of protein location") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (establishment or maintenance of neuroblast polarity) AnnotationAssertion(Annotation( "GOC:bf") Annotation( "GOC:mah") Annotation( "GOC:mtg_sensu") Annotation( "PMID:19375318") Annotation( "PMID:20066083") "Any cellular process that results in the specification, formation or maintenance of the apicobasal polarity of a neuroblast cell, a progenitor of the central nervous system.") @@ -24417,6 +29390,31 @@ SubClassOf( ) SubClassOf( ) +# Class: (regulation of keratinocyte differentiation) + +AnnotationAssertion(Annotation( "GOC:go_curators") "Any process that modulates the frequency, rate or extent of keratinocyte differentiation.") +AnnotationAssertion(rdfs:label "regulation of keratinocyte differentiation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) + +# Class: (negative regulation of keratinocyte differentiation) + +AnnotationAssertion(Annotation( "GOC:go_curators") "Any process that stops, prevents, or reduces the frequency, rate or extent of keratinocyte differentiation.") +AnnotationAssertion(rdfs:label "negative regulation of keratinocyte differentiation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) + +# Class: (positive regulation of keratinocyte differentiation) + +AnnotationAssertion(Annotation( "GOC:go_curators") "Any process that activates or increases the frequency, rate or extent of keratinocyte differentiation.") +AnnotationAssertion(rdfs:label "positive regulation of keratinocyte differentiation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) + # Class: (regulation of lymphocyte differentiation) AnnotationAssertion(Annotation( "GOC:go_curators") "Any process that modulates the frequency, rate or extent of lymphocyte differentiation.") @@ -24446,6 +29444,24 @@ SubClassOf( ) SubClassOf( ) +# Class: (regulation of melanocyte differentiation) + +AnnotationAssertion(Annotation( "GOC:go_curators") "Any process that modulates the frequency, rate or extent of melanocyte differentiation.") +AnnotationAssertion(rdfs:label "regulation of melanocyte differentiation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (negative regulation of melanocyte differentiation) + +AnnotationAssertion(Annotation( "GOC:go_curators") "Any process that stops, prevents, or reduces the frequency, rate or extent of melanocyte differentiation.") +AnnotationAssertion(rdfs:label "negative regulation of melanocyte differentiation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (positive regulation of melanocyte differentiation) + +AnnotationAssertion(Annotation( "GOC:go_curators") "Any process that activates or increases the frequency, rate or extent of melanocyte differentiation.") +AnnotationAssertion(rdfs:label "positive regulation of melanocyte differentiation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + # Class: (regulation of myeloid cell differentiation) AnnotationAssertion(Annotation( "GOC:go_curators") "Any process that modulates the frequency, rate or extent of myeloid cell differentiation.") @@ -24537,6 +29553,24 @@ AnnotationAssertion(Annotation( "positive regulation of monocyte differentiation") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +# Class: (regulation of neutrophil differentiation) + +AnnotationAssertion(Annotation( "GOC:go_curators") "Any process that modulates the frequency, rate or extent of neutrophil differentiation.") +AnnotationAssertion(rdfs:label "regulation of neutrophil differentiation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (negative regulation of neutrophil differentiation) + +AnnotationAssertion(Annotation( "GOC:go_curators") "Any process that stops, prevents, or reduces the frequency, rate or extent of neutrophil differentiation.") +AnnotationAssertion(rdfs:label "negative regulation of neutrophil differentiation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (positive regulation of neutrophil differentiation) + +AnnotationAssertion(Annotation( "GOC:go_curators") "Any process that activates or increases the frequency, rate or extent of neutrophil differentiation.") +AnnotationAssertion(rdfs:label "positive regulation of neutrophil differentiation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + # Class: (regulation of myoblast differentiation) AnnotationAssertion(Annotation( "CL:0000056") Annotation( "GOC:go_curators") Annotation( "GOC:mtg_muscle") "Any process that modulates the frequency, rate or extent of myoblast differentiation. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers.") @@ -24650,7 +29684,7 @@ SubClassOf( "GOC:go_curators") "Any process that stops, prevents, or reduces the frequency, rate or extent of gluconeogenesis.") AnnotationAssertion(rdfs:label "negative regulation of gluconeogenesis") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ) # Class: (positive regulation of gluconeogenesis) @@ -24658,7 +29692,7 @@ SubClassOf( "GOC:go_curators") "Any process that activates or increases the frequency, rate or extent of gluconeogenesis.") AnnotationAssertion(rdfs:label "positive regulation of gluconeogenesis") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) # Class: (positive regulation of cilium assembly) @@ -24672,8 +29706,8 @@ AnnotationAssertion(Annotation( "positive regulation of glycogen biosynthetic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ) SubClassOf( ) -SubClassOf( ) SubClassOf( ) # Class: (positive regulation of translation) @@ -24703,6 +29737,20 @@ AnnotationAssertion(rdfs:label "posi EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +# Class: (negative regulation of amino acid metabolic process) + +AnnotationAssertion(Annotation( "GOC:go_curators") "Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving amino acid.") +AnnotationAssertion(rdfs:label "negative regulation of amino acid metabolic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) + +# Class: (positive regulation of amino acid metabolic process) + +AnnotationAssertion(Annotation( "GOC:go_curators") "Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving amino acid.") +AnnotationAssertion(rdfs:label "positive regulation of amino acid metabolic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) + # Class: (regulation of angiogenesis) AnnotationAssertion(Annotation( "GOC:go_curators") "Any process that modulates the frequency, rate or extent of angiogenesis.") @@ -24794,7 +29842,7 @@ AnnotationAssertion(Annotation( "negative regulation of glycogen catabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) +SubClassOf( ) SubClassOf( ) # Class: (positive regulation of glycogen catabolic process) @@ -24803,7 +29851,7 @@ AnnotationAssertion(Annotation( "positive regulation of glycogen catabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) +SubClassOf( ) SubClassOf( ) # Class: (negative regulation of heart contraction) @@ -25004,18 +30052,6 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) -# Class: (negative regulation of nucleobase-containing compound metabolic process) - -AnnotationAssertion(Annotation( "GOC:go_curators") "Any cellular process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids.") -AnnotationAssertion(rdfs:label "negative regulation of nucleobase-containing compound metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) - -# Class: (positive regulation of nucleobase-containing compound metabolic process) - -AnnotationAssertion(Annotation( "GOC:go_curators") "Any cellular process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids.") -AnnotationAssertion(rdfs:label "positive regulation of nucleobase-containing compound metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) - # Class: (negative regulation of steroid metabolic process) AnnotationAssertion(Annotation( "GOC:go_curators") "Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving steroids.") @@ -25127,6 +30163,21 @@ AnnotationAssertion(rdfs:label "carb EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +# Class: (membrane lipid catabolic process) + +AnnotationAssertion(Annotation( "GOC:ai") "The chemical reactions and pathways resulting in the breakdown of membrane lipids, any lipid found in or associated with a biological membrane.") +AnnotationAssertion(rdfs:label "membrane lipid catabolic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) + +# Class: (membrane lipid biosynthetic process) + +AnnotationAssertion(Annotation( "GOC:ai") "The chemical reactions and pathways resulting in the formation of membrane lipids, any lipid found in or associated with a biological membrane.") +AnnotationAssertion(rdfs:label "membrane lipid biosynthetic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) + # Class: (photoreceptor cell differentiation) AnnotationAssertion(Annotation( "GOC:ai") Annotation( "ISBN:0198506732") "The specialization of organization of a photoreceptor, a cell that responds to incident electromagnetic radiation, particularly visible light. An example of this process is found in Drosophila melanogaster.") @@ -25301,6 +30352,79 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (regulation of nucleocytoplasmic transport) + +AnnotationAssertion(Annotation( "GOC:bf") "Any process that modulates the frequency, rate or extent of the directed movement of substances between the nucleus and the cytoplasm.") +AnnotationAssertion(rdfs:label "regulation of nucleocytoplasmic transport") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (negative regulation of nucleocytoplasmic transport) + +AnnotationAssertion(Annotation( "GOC:bf") "Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of substances between the cytoplasm and the nucleus.") +AnnotationAssertion(rdfs:label "negative regulation of nucleocytoplasmic transport") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (positive regulation of nucleocytoplasmic transport) + +AnnotationAssertion(Annotation( "GOC:bf") "Any process that activates or increases the frequency, rate or extent of the directed movement of substances between the nucleus and the cytoplasm.") +AnnotationAssertion(rdfs:label "positive regulation of nucleocytoplasmic transport") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (regulation of protein export from nucleus) + +AnnotationAssertion(Annotation( "GOC:bf") "Any process that modulates the frequency, rate or extent of the directed movement of proteins from the nucleus to the cytoplasm.") +AnnotationAssertion(rdfs:label "regulation of protein export from nucleus") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (negative regulation of protein export from nucleus) + +AnnotationAssertion(Annotation( "GOC:bf") "Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of proteins from the nucleus into the cytoplasm.") +AnnotationAssertion(rdfs:label "negative regulation of protein export from nucleus") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) + +# Class: (positive regulation of protein export from nucleus) + +AnnotationAssertion(Annotation( "GOC:bf") "Any process that activates or increases the frequency, rate or extent of directed movement of proteins from the nucleus into the cytoplasm.") +AnnotationAssertion(rdfs:label "positive regulation of protein export from nucleus") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (regulation of RNA import into nucleus) + +AnnotationAssertion(Annotation( "GOC:bf") "Any process that modulates the frequency, rate or extent of movement of RNA from the cytoplasm to the nucleus.") +AnnotationAssertion(rdfs:label "regulation of RNA import into nucleus") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (negative regulation of RNA import into nucleus) + +AnnotationAssertion(Annotation( "GOC:bf") "Any process that stops, prevents, or reduces the frequency, rate or extent of the movement of RNA from the cytoplasm into the nucleus.") +AnnotationAssertion(rdfs:label "negative regulation of RNA import into nucleus") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (positive regulation of RNA import into nucleus) + +AnnotationAssertion(Annotation( "GOC:bf") "Any process that activates or increases the frequency, rate or extent of movement of RNA from the cytoplasm into the nucleus.") +AnnotationAssertion(rdfs:label "positive regulation of RNA import into nucleus") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (regulation of RNA export from nucleus) + +AnnotationAssertion(Annotation( "GOC:bf") "Any process that modulates the frequency, rate or extent of the directed movement of RNA from the nucleus to the cytoplasm.") +AnnotationAssertion(rdfs:label "regulation of RNA export from nucleus") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (negative regulation of RNA export from nucleus) + +AnnotationAssertion(Annotation( "GOC:bf") "Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of RNA from the nucleus into the cytoplasm.") +AnnotationAssertion(rdfs:label "negative regulation of RNA export from nucleus") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (positive regulation of RNA export from nucleus) + +AnnotationAssertion(Annotation( "GOC:bf") "Any process that activates or increases the frequency, rate or extent of directed movement of RNA from the nucleus into the cytoplasm.") +AnnotationAssertion(rdfs:label "positive regulation of RNA export from nucleus") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + # Class: (bone remodeling) AnnotationAssertion(Annotation( "GOC:curators") "The continuous turnover of bone matrix and mineral that involves first, an increase in resorption (osteoclastic activity) and later, reactive bone formation (osteoblastic activity). The process of bone remodeling takes place in the adult skeleton at discrete foci. The process ensures the mechanical integrity of the skeleton throughout life and plays an important role in calcium homeostasis. An imbalance in the regulation of bone resorption and bone formation results in many of the metabolic bone diseases, such as osteoporosis.") @@ -25397,6 +30521,19 @@ AnnotationAssertion(rdfs:label "intr EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +# Class: (regulation of neurotransmitter secretion) + +AnnotationAssertion(Annotation( "GOC:ai") "Any process that modulates the frequency, rate or extent of the regulated release of a neurotransmitter from a cell.") +AnnotationAssertion(rdfs:label "regulation of neurotransmitter secretion") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (negative regulation of neurotransmitter secretion) + +AnnotationAssertion(Annotation( "GOC:ai") "Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of a neurotransmitter.") +AnnotationAssertion(rdfs:label "negative regulation of neurotransmitter secretion") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + # Class: (carboxylic acid transport) AnnotationAssertion(Annotation( "GOC:ai") "The directed movement of carboxylic acids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Carboxylic acids are organic acids containing one or more carboxyl (COOH) groups or anions (COO-).") @@ -25750,6 +30887,14 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (parasympathetic nervous system development) + +AnnotationAssertion(Annotation( "FMA:9907") Annotation( "GOC:jid") Annotation( "GOC:sr") "The process whose specific outcome is the progression of the parasympathetic nervous system over time, from its formation to the mature structure. The parasympathetic nervous system is one of the two divisions of the vertebrate autonomic nervous system. Parasympathetic nerves emerge cranially as pre ganglionic fibers from oculomotor, facial, glossopharyngeal and vagus and from the sacral region of the spinal cord. Most neurons are cholinergic and responses are mediated by muscarinic receptors. The parasympathetic system innervates, for example: salivary glands, thoracic and abdominal viscera, bladder and genitalia.") +AnnotationAssertion(rdfs:label "parasympathetic nervous system development") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (regulation of timing of cell differentiation) AnnotationAssertion(Annotation( "GOC:bf") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "GOC:tb") "The process controlling the activation and/or rate at which relatively unspecialized cells acquire specialized features. Any process that modulates the rate, frequency or extent of the XXX at a consistent predetermined time point during its development.") @@ -26207,6 +31352,32 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (oligodendrocyte differentiation) + +AnnotationAssertion(Annotation( "GOC:vp") Annotation( "PMID:15139015") "The process in which a relatively unspecialized cell acquires the specialized features of an oligodendrocyte. An oligodendrocyte is a type of glial cell involved in myelinating the axons of neurons in the central nervous system.") +AnnotationAssertion(rdfs:label "oligodendrocyte differentiation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (regulation of oligodendrocyte differentiation) + +AnnotationAssertion(Annotation( "GOC:vp") Annotation( "PMID:15139015") "Any process that modulates the frequency, rate or extent of oligodendrocyte differentiation.") +AnnotationAssertion(rdfs:label "regulation of oligodendrocyte differentiation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (positive regulation of oligodendrocyte differentiation) + +AnnotationAssertion(Annotation( "GOC:vp") Annotation( "PMID:15139015") "Any process that activates or increases the frequency, rate or extent of oligodendrocyte differentiation.") +AnnotationAssertion(rdfs:label "positive regulation of oligodendrocyte differentiation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (negative regulation of oligodendrocyte differentiation) + +AnnotationAssertion(Annotation( "GOC:vp") Annotation( "PMID:15139015") "Any process that stops, prevents, or reduces the frequency, rate or extent of oligodendrocyte differentiation.") +AnnotationAssertion(rdfs:label "negative regulation of oligodendrocyte differentiation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + # Class: (tissue morphogenesis) AnnotationAssertion(Annotation( "GOC:dph") Annotation( "GOC:jid") "The process in which the anatomical structures of a tissue are generated and organized.") @@ -26383,6 +31554,15 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (inner ear development) + +AnnotationAssertion(Annotation( "GOC:sr") "The process whose specific outcome is the progression of the inner ear over time, from its formation to the mature structure.") +AnnotationAssertion(rdfs:label "inner ear development") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (artery morphogenesis) AnnotationAssertion(Annotation( "GOC:dsf") Annotation( "PMID:16740480") "The process in which the anatomical structures of arterial blood vessels are generated and organized. Arteries are blood vessels that transport blood from the heart to the body and its organs.") @@ -26399,6 +31579,26 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (diencephalon morphogenesis) + +AnnotationAssertion(Annotation( "GOC:cls") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") Annotation( "ISBN:0838580343") "The process in which the anatomical structures of the diencephalon are generated and organized. The diencephalon is the paired caudal parts of the prosencephalon from which the thalamus, hypothalamus, epithalamus and subthalamus are derived; these regions regulate autonomic, visceral and endocrine function, and process information directed to the cerebral cortex.") +AnnotationAssertion(rdfs:label "diencephalon morphogenesis") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (forebrain morphogenesis) + +AnnotationAssertion(Annotation( "GOC:cvs") Annotation( "GOC:dgh") Annotation( "GOC:dph") Annotation( "GOC:jid") "The process in which the anatomical structures of the forebrain are generated and organized. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions).") +AnnotationAssertion(rdfs:label "forebrain morphogenesis") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (brain morphogenesis) AnnotationAssertion(Annotation( "GOC:dgh") Annotation( "GOC:jid") "The process in which the anatomical structures of the brain are generated and organized. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.).") @@ -26438,6 +31638,12 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) +# Class: (glioblast division) + +AnnotationAssertion(Annotation( "GOC:devbiol") "The process resulting in the physical partitioning and separation of a glioblast into daughter cells.") +AnnotationAssertion(rdfs:label "glioblast division") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + # Class: (stem cell differentiation) AnnotationAssertion(Annotation( "CL:0000034") Annotation( "GOC:isa_complete") "The process in which a relatively unspecialized cell acquires specialized features of a stem cell. A stem cell is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells.") @@ -26662,21 +31868,21 @@ SubClassOf( "GOC:ai") "Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving lipoproteins, any conjugated, water-soluble protein in which the nonprotein group consists of a lipid or lipids.") AnnotationAssertion(rdfs:label "regulation of lipoprotein metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) # Class: (positive regulation of lipoprotein metabolic process) AnnotationAssertion(Annotation( "GOC:ai") "Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving lipoproteins, any conjugated, water-soluble protein in which the nonprotein group consists of a lipid or lipids.") AnnotationAssertion(rdfs:label "positive regulation of lipoprotein metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) # Class: (negative regulation of lipoprotein metabolic process) AnnotationAssertion(Annotation( "GOC:ai") "Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving lipoproteins, any conjugated, water-soluble protein in which the nonprotein group consists of a lipid or lipids.") AnnotationAssertion(rdfs:label "negative regulation of lipoprotein metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) # Class: (regulation of phagocytosis) @@ -26727,6 +31933,28 @@ SubClassOf( ) SubClassOf( ) +# Class: (regulation of axonogenesis) + +AnnotationAssertion(Annotation( "GOC:ai") "Any process that modulates the frequency, rate or extent of axonogenesis, the generation of an axon, the long process of a neuron.") +AnnotationAssertion(rdfs:label "regulation of axonogenesis") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (negative regulation of axonogenesis) + +AnnotationAssertion(Annotation( "GOC:ai") "Any process that stops, prevents, or reduces the frequency, rate or extent of axonogenesis.") +AnnotationAssertion(rdfs:label "negative regulation of axonogenesis") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (positive regulation of axonogenesis) + +AnnotationAssertion(Annotation( "GOC:ai") "Any process that activates or increases the frequency, rate or extent of axonogenesis.") +AnnotationAssertion(rdfs:label "positive regulation of axonogenesis") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) + # Class: (regulation of immune response) AnnotationAssertion(Annotation( "GOC:ai") "Any process that modulates the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus.") @@ -26760,12 +31988,6 @@ AnnotationAssertion(rdfs:label "regu EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -# Class: (regulation of catalytic activity) - -AnnotationAssertion(Annotation( "GOC:ai") Annotation( "GOC:ebc") Annotation( "GOC:vw") "Any process that modulates the activity of an enzyme.") -AnnotationAssertion(rdfs:label "regulation of catalytic activity") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) - # Class: (regulation of developmental process) AnnotationAssertion(Annotation( "GOC:go_curators") "Any process that modulates the frequency, rate or extent of development, the biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote, or a young adult) to a later condition (e.g. a multicellular animal or an aged adult).") @@ -26934,6 +32156,7 @@ SubClassOf( (musculoskeletal movement) AnnotationAssertion(Annotation( "GOC:dph") "The movement of an organism or part of an organism using mechanoreceptors, the nervous system, striated muscle and/or the skeletal system.") +AnnotationAssertion( ) AnnotationAssertion(rdfs:label "musculoskeletal movement") SubClassOf( ) SubClassOf( ) @@ -26996,9 +32219,37 @@ SubClassOf( ObjectSomeValuesFrom( "GOC:ai") Annotation( "GOC:dos") "The series of events involved in visual perception in which a light stimulus is received and converted into a molecular signal.") AnnotationAssertion(rdfs:label "detection of light stimulus involved in visual perception") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) +# Class: (sensory perception of taste) + +AnnotationAssertion(Annotation( "GOC:ai") "The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells. This is a neurological process.") +AnnotationAssertion( "Wikipedia:Taste") +AnnotationAssertion(rdfs:label "sensory perception of taste") +SubClassOf( ) + +# Class: (detection of mechanical stimulus involved in sensory perception of sound) + +AnnotationAssertion(Annotation( "GOC:ai") "The series of events involved in the perception of sound vibration in which the vibration is received and converted into a molecular signal.") +AnnotationAssertion(rdfs:label "detection of mechanical stimulus involved in sensory perception of sound") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) + +# Class: (detection of chemical stimulus involved in sensory perception of smell) + +AnnotationAssertion(Annotation( "GOC:ai") "The series of events involved in the perception of smell in which an olfactory chemical stimulus is received and converted into a molecular signal.") +AnnotationAssertion(rdfs:label "detection of chemical stimulus involved in sensory perception of smell") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) + +# Class: (detection of chemical stimulus involved in sensory perception of taste) + +AnnotationAssertion(Annotation( "GOC:ai") "The series of events involved in the perception of taste in which a gustatory chemical stimulus is received and converted into a molecular signal.") +AnnotationAssertion(rdfs:label "detection of chemical stimulus involved in sensory perception of taste") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) + # Class: (regulation of chemotaxis) AnnotationAssertion(Annotation( "GOC:ai") "Any process that modulates the frequency, rate or extent of the directed movement of a motile cell or organism in response to a specific chemical concentration gradient.") @@ -27070,6 +32321,13 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (detection of mechanical stimulus involved in sensory perception of pain) + +AnnotationAssertion(Annotation( "GOC:ai") Annotation( "GOC:dos") "The series of events involved in the perception of pain in which a mechanical stimulus is received and converted into a molecular signal.") +AnnotationAssertion(rdfs:label "detection of mechanical stimulus involved in sensory perception of pain") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) + # Class: (detection of chemical stimulus involved in sensory perception of pain) AnnotationAssertion(Annotation( "GOC:ai") "The series of events involved in the perception of pain in which a chemical stimulus is received and converted into a molecular signal.") @@ -27077,6 +32335,15 @@ AnnotationAssertion(rdfs:label "dete EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +# Class: (detection of mechanical stimulus involved in sensory perception) + +AnnotationAssertion(Annotation( "GOC:ai") Annotation( "GOC:dos") "The series of events in which a mechanical stimulus is received and converted into a molecular signal as part of sensory perception.") +AnnotationAssertion(rdfs:label "detection of mechanical stimulus involved in sensory perception") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (sensory perception of touch) AnnotationAssertion(Annotation( "GOC:ai") "The series of events required for an organism to receive a touch stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process. The perception of touch in animals is mediated by mechanoreceptors in the skin and mucous membranes and is the sense by which contact with objects gives evidence as to certain of their qualities. Different types of touch can be perceived (for example, light, coarse, pressure and tickling) and the stimulus may be external or internal (e.g. the feeling of a full stomach).") @@ -27084,6 +32351,21 @@ AnnotationAssertion( "sensory perception of touch") SubClassOf( ) +# Class: (detection of mechanical stimulus involved in sensory perception of touch) + +AnnotationAssertion(Annotation( "GOC:ai") Annotation( "GOC:dos") "The series of events involved in the perception of touch in which a mechanical stimulus is received and converted into a molecular signal.") +AnnotationAssertion(rdfs:label "detection of mechanical stimulus involved in sensory perception of touch") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) + +# Class: (detection of mechanical stimulus) + +AnnotationAssertion(Annotation( "GOC:ai") Annotation( "GOC:dos") "The series of events by which a mechanical stimulus is received and converted into a molecular signal.") +AnnotationAssertion(rdfs:label "detection of mechanical stimulus") +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) + # Class: (regulation of lipid catabolic process) AnnotationAssertion(Annotation( "GOC:ai") "Any process that modulates the frequency, rate, or extent of the chemical reactions and pathways resulting in the breakdown of lipids.") @@ -27109,12 +32391,6 @@ AnnotationAssertion(rdfs:label "acti EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -# Class: (DNA transport) - -AnnotationAssertion(Annotation( "GOC:ai") "The directed movement of RNA, deoxyribonucleic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.") -AnnotationAssertion(rdfs:label "DNA transport") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) - # Class: (RNA transmembrane transporter activity) AnnotationAssertion(Annotation( "GOC:ai") "Enables the transfer of RNA, ribonucleic acid, from one side of a membrane to the other.") @@ -27123,13 +32399,6 @@ AnnotationAssertion(rdfs:label "RNA EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (DNA transmembrane transporter activity) - -AnnotationAssertion(Annotation( "GOC:ai") "Enables the transfer of DNA, deoxyribonucleic acid, from one side of a membrane to the other.") -AnnotationAssertion(rdfs:label "DNA transmembrane transporter activity") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (regulation of secretion) AnnotationAssertion(Annotation( "GOC:ai") "Any process that modulates the frequency, rate or extent of the controlled release of a substance from a cell or a tissue.") @@ -27176,24 +32445,6 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) -# Class: (regulation of DNA metabolic process) - -AnnotationAssertion(Annotation( "GOC:ai") "Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving DNA.") -AnnotationAssertion(rdfs:label "regulation of DNA metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) - -# Class: (negative regulation of DNA metabolic process) - -AnnotationAssertion(Annotation( "GOC:ai") "Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving DNA.") -AnnotationAssertion(rdfs:label "negative regulation of DNA metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) - -# Class: (positive regulation of DNA metabolic process) - -AnnotationAssertion(Annotation( "GOC:ai") "Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving DNA.") -AnnotationAssertion(rdfs:label "positive regulation of DNA metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) - # Class: (negative regulation of lipid biosynthetic process) AnnotationAssertion(Annotation( "GOC:ai") "Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of lipids.") @@ -27327,6 +32578,12 @@ AnnotationAssertion(Annotation( "positive regulation of striated muscle cell differentiation") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +# Class: (nuclear export) + +AnnotationAssertion(Annotation( "GOC:ai") "The directed movement of substances out of the nucleus.") +AnnotationAssertion(rdfs:label "nuclear export") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) + # Class: (nuclear transport) AnnotationAssertion(Annotation( "GOC:ai") "The directed movement of substances into, out of, or within the nucleus.") @@ -27334,6 +32591,12 @@ AnnotationAssertion( "nuclear transport") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +# Class: (import into nucleus) + +AnnotationAssertion(Annotation( "GOC:ai") "The directed movement of substances into the nucleus.") +AnnotationAssertion(rdfs:label "import into nucleus") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) + # Class: (localization) AnnotationAssertion(Annotation( "GOC:ai") Annotation( "GOC:dos") "Any process in which a cell, a substance, or a cellular entity, such as a protein complex or organelle, is transported, tethered to or otherwise maintained in a specific location. In the case of substances, localization may also be achieved via selective degradation.") @@ -27382,6 +32645,12 @@ AnnotationAssertion(Annotation( "establishment of localization") SubClassOf( ) +# Class: (maintenance of location) + +AnnotationAssertion(Annotation( "GOC:ai") Annotation( "GOC:dph") Annotation( "GOC:tb") "Any process in which a cell, substance or cellular entity, such as a protein complex or organelle, is maintained in a location and prevented from moving elsewhere.") +AnnotationAssertion(rdfs:label "maintenance of location") +SubClassOf( ) + # Class: (establishment of RNA localization) AnnotationAssertion(Annotation( "GOC:ai") "The directed movement of RNA to a specific location.") @@ -27526,24 +32795,6 @@ SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( )) SubClassOf( ObjectAllValuesFrom( )) -# Class: (regulation of hydrolase activity) - -AnnotationAssertion(Annotation( "GOC:ai") "Any process that modulates the frequency, rate or extent of hydrolase activity, the catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.") -AnnotationAssertion(rdfs:label "regulation of hydrolase activity") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) - -# Class: (positive regulation of hydrolase activity) - -AnnotationAssertion(Annotation( "GOC:ai") "Any process that activates or increases the frequency, rate or extent of hydrolase activity, the catalysis of the hydrolysis of various bonds.") -AnnotationAssertion(rdfs:label "positive regulation of hydrolase activity") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) - -# Class: (negative regulation of hydrolase activity) - -AnnotationAssertion(Annotation( "GOC:ai") "Any process that stops or reduces the rate of hydrolase activity, the catalysis of the hydrolysis of various bonds.") -AnnotationAssertion(rdfs:label "negative regulation of hydrolase activity") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) - # Class: (neuron apoptotic process) AnnotationAssertion(Annotation( "CL:0000540") Annotation( "GOC:mtg_apoptosis") "Any apoptotic process in a neuron, the basic cellular unit of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system.") @@ -27599,6 +32850,16 @@ AnnotationAssertion(rdfs:label "myob EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +# Class: (maintenance of protein location in nucleus) + +AnnotationAssertion(Annotation( "GOC:ai") "Any process in which a protein is maintained in the nucleus and prevented from moving elsewhere. These include sequestration within the nucleus, protein stabilization to prevent transport elsewhere and the active retrieval of proteins that escape the nucleus.") +AnnotationAssertion(rdfs:label "maintenance of protein location in nucleus") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectAllValuesFrom( )) + # Class: (vesicle fusion with vacuole) AnnotationAssertion(Annotation( "GOC:ai") "The joining of the lipid bilayer membrane around a vesicle with the lipid bilayer membrane around the vacuole.") @@ -27625,6 +32886,51 @@ AnnotationAssertion(Annotation( "positive regulation of cytoskeleton organization") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +# Class: (keratinocyte migration) + +AnnotationAssertion(Annotation( "ISBN:0721662544") "The directed movement of a keratinocyte, epidermal cells which synthesize keratin, from one site to another.") +AnnotationAssertion(rdfs:label "keratinocyte migration") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) +SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) +DisjointClasses( ObjectSomeValuesFrom( )) + +# Class: (regulation of keratinocyte migration) + +AnnotationAssertion(Annotation( "GOC:ai") "Any process that modulates the frequency, rate or extent of keratinocyte migration.") +AnnotationAssertion(rdfs:label "regulation of keratinocyte migration") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (negative regulation of keratinocyte migration) + +AnnotationAssertion(Annotation( "GOC:ai") "Any process that stops, prevents, or reduces the frequency, rate or extent of keratinocyte migration.") +AnnotationAssertion(rdfs:label "negative regulation of keratinocyte migration") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (positive regulation of keratinocyte migration) + +AnnotationAssertion(Annotation( "GOC:ai") "Any process that activates or increases the frequency, rate or extent of keratinocyte migration.") +AnnotationAssertion(rdfs:label "positive regulation of keratinocyte migration") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (regulation of neurotransmitter transport) + +AnnotationAssertion(Annotation( "GOC:ai") "Any process that modulates the frequency, rate or extent of the directed movement of a neurotransmitter into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.") +AnnotationAssertion(rdfs:label "regulation of neurotransmitter transport") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (negative regulation of neurotransmitter transport) + +AnnotationAssertion(Annotation( "GOC:ai") "Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of a neurotransmitter into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.") +AnnotationAssertion(rdfs:label "negative regulation of neurotransmitter transport") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (positive regulation of neurotransmitter transport) + +AnnotationAssertion(Annotation( "GOC:ai") "Any process that activates or increases the frequency, rate or extent of the directed movement of a neurotransmitter into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.") +AnnotationAssertion(rdfs:label "positive regulation of neurotransmitter transport") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + # Class: (detection of stimulus) AnnotationAssertion(Annotation( "GOC:add") Annotation( "GOC:ai") Annotation( "GOC:dph") Annotation( "GOC:mah") "The series of events in which a stimulus is received by a cell or organism and converted into a molecular signal.") @@ -27706,6 +33012,29 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) +# Class: (maintenance of location in cell) + +AnnotationAssertion(Annotation( "GOC:ai") "Any process in which a substance or cellular entity, such as a protein complex or organelle, is maintained in a specific location within, or in the membrane of, a cell, and is prevented from moving elsewhere.") +AnnotationAssertion(rdfs:label "maintenance of location in cell") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (maintenance of chromosome location) + +AnnotationAssertion(Annotation( "GOC:ai") Annotation( "GOC:dph") Annotation( "GOC:tb") "Any process in which a chromosome is maintained in a specific location within a cell and prevented from moving elsewhere.") +AnnotationAssertion(rdfs:label "maintenance of chromosome location") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) + +# Class: (maintenance of vesicle location) + +AnnotationAssertion(Annotation( "GOC:ai") Annotation( "GOC:dph") Annotation( "GOC:tb") "Any process in which a vesicle is maintained in a specific location within a cell and prevented from moving elsewhere.") +AnnotationAssertion(rdfs:label "maintenance of vesicle location") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) + # Class: (establishment of organelle localization) AnnotationAssertion(Annotation( "GOC:ai") "The directed movement of an organelle to a specific location.") @@ -27713,6 +33042,20 @@ AnnotationAssertion(rdfs:label "esta EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +# Class: (maintenance of organelle location) + +AnnotationAssertion(Annotation( "GOC:ai") Annotation( "GOC:dph") Annotation( "GOC:tb") "Any process in which an organelle is maintained in a specific location within a cell and prevented from moving elsewhere.") +AnnotationAssertion(rdfs:label "maintenance of organelle location") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (maintenance of nucleus location) + +AnnotationAssertion(Annotation( "GOC:ai") Annotation( "GOC:dph") Annotation( "GOC:tb") "Any process in which the nucleus is maintained in a specific location within a cell and prevented from moving elsewhere.") +AnnotationAssertion(rdfs:label "maintenance of nucleus location") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) + # Class: (localization within membrane) AnnotationAssertion(Annotation( "GOC:ai") "Any process in which a substance or cellular entity, such as a protein complex or organelle, is transported to, and/or maintained in, a specific location within a membrane.") @@ -27735,6 +33078,13 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) +# Class: (maintenance of Golgi location) + +AnnotationAssertion(Annotation( "GOC:ai") Annotation( "GOC:dph") Annotation( "GOC:tb") "Any process in which the Golgi is maintained in a specific location within a cell and prevented from moving elsewhere.") +AnnotationAssertion(rdfs:label "maintenance of Golgi location") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) + # Class: (response to other organism) AnnotationAssertion(Annotation( "GOC:ai") "Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from another living organism.") @@ -27847,12 +33197,33 @@ AnnotationAssertion(rdfs:label "regu EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +# Class: (synaptic transmission, GABAergic) + +AnnotationAssertion(Annotation( "GOC:dos") Annotation( "ISBN:0126603030") "The vesicular release of gamma-aminobutyric acid (GABA). from a presynapse, across a chemical synapse, the subsequent activation of GABA receptors at the postsynapse of a target cell (neuron, muscle, or secretory cell) and the effects of this activation on the postsynaptic membrane potential and ionic composition of the postsynaptic cytosol. This process encompasses both spontaneous and evoked release of neurotransmitter and all parts of synaptic vesicle exocytosis. Evoked transmission starts with the arrival of an action potential at the presynapse.") +AnnotationAssertion(rdfs:label "synaptic transmission, GABAergic") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (catecholamine transport) AnnotationAssertion(Annotation( "GOC:ai") Annotation( "ISBN:0198506732") "The directed movement of catecholamines, a group of physiologically important biogenic amines that possess a catechol (3,4-dihydroxyphenyl) nucleus and are derivatives of 3,4-dihydroxyphenylethylamine.") AnnotationAssertion(rdfs:label "catecholamine transport") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +# Class: (L-glutamate import) + +AnnotationAssertion(Annotation( "GOC:ai") Annotation( "GOC:jsg") Annotation( "GOC:mah") "The directed movement of L-glutamate, the L-enantiomer of the anion of 2-aminopentanedioic acid, into a cell or organelle.") +AnnotationAssertion(rdfs:label "L-glutamate import") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) + +# Class: (gamma-aminobutyric acid import) + +AnnotationAssertion(Annotation( "GOC:ai") "The directed movement of gamma-aminobutyric acid (GABA, 4-aminobutyrate) into a cell or organelle.") +AnnotationAssertion(rdfs:label "gamma-aminobutyric acid import") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + # Class: (regulation of amine transport) AnnotationAssertion(Annotation( "GOC:ai") "Any process that modulates the frequency, rate or extent of the directed movement of amines into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.") @@ -27876,6 +33247,27 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) +# Class: (regulation of amino acid transport) + +AnnotationAssertion(Annotation( "GOC:ai") "Any process that modulates the frequency, rate or extent of the directed movement of amino acids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.") +AnnotationAssertion(rdfs:label "regulation of amino acid transport") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) + +# Class: (negative regulation of amino acid transport) + +AnnotationAssertion(Annotation( "GOC:ai") "Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of amino acids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.") +AnnotationAssertion(rdfs:label "negative regulation of amino acid transport") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) + +# Class: (positive regulation of amino acid transport) + +AnnotationAssertion(Annotation( "GOC:ai") "Any process that activates, maintains or increases the frequency, rate or extent of the directed movement of amino acids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.") +AnnotationAssertion(rdfs:label "positive regulation of amino acid transport") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) + # Class: (regulation of nervous system development) AnnotationAssertion(Annotation( "GOC:ai") "Any process that modulates the frequency, rate or extent of nervous system development, the origin and formation of nervous tissue.") @@ -27924,6 +33316,24 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) +# Class: (regulation of synaptic transmission, glutamatergic) + +AnnotationAssertion(Annotation( "GOC:ai") "Any process that modulates the frequency, rate or extent of glutamatergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate.") +AnnotationAssertion(rdfs:label "regulation of synaptic transmission, glutamatergic") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (negative regulation of synaptic transmission, glutamatergic) + +AnnotationAssertion(Annotation( "GOC:ai") "Any process that stops, prevents, or reduces the frequency, rate or extent of glutamatergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate.") +AnnotationAssertion(rdfs:label "negative regulation of synaptic transmission, glutamatergic") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (positive regulation of synaptic transmission, glutamatergic) + +AnnotationAssertion(Annotation( "GOC:ai") "Any process that activates, maintains or increases the frequency, rate or extent of glutamatergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate.") +AnnotationAssertion(rdfs:label "positive regulation of synaptic transmission, glutamatergic") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + # Class: (regulation of transmission of nerve impulse) AnnotationAssertion(Annotation( "GOC:ai") "Any process that modulates the frequency, rate or extent of transmission of a nerve impulse, the sequential electrochemical polarization and depolarization that travels across the membrane of a neuron in response to stimulation.") @@ -28109,6 +33519,23 @@ AnnotationAssertion(Annotation( "negative regulation of cardiac muscle tissue development") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +# Class: (D-glucose transmembrane transporter activity) + +AnnotationAssertion(Annotation( "GOC:jid") Annotation( "GOC:jsg") Annotation( "GOC:mah") "Enables the transfer of the D-enantiomer of the hexose monosaccharide glucose from one side of a membrane to the other.") +AnnotationAssertion(Annotation(rdfs:label "SLC2A6,8,10,12 transport Glc from extracellular region to cytosol") "Reactome:R-HSA-429094") +AnnotationAssertion(Annotation(rdfs:label "GLUT2 (SLC2A2) transports Glc from cytosol to extracellular region") "Reactome:R-HSA-450095") +AnnotationAssertion(Annotation(rdfs:label "Transport of Extracellular Glucose to the Cytosol by GLUT1 and GLUT2") "Reactome:R-HSA-499981") +AnnotationAssertion(Annotation(rdfs:label "GLUT1 (SLC2A1) tetramer transports Glc from extracellular region to cytosol") "Reactome:R-HSA-5339524") +AnnotationAssertion(Annotation(rdfs:label "SLC2A1 tetramer does not transport Glc from extracellular region to cytosol") "Reactome:R-HSA-5632804") +AnnotationAssertion(Annotation(rdfs:label "Defective SLC2A10 does not transport Glc from extracellular region to cytosol") "Reactome:R-HSA-5632871") +AnnotationAssertion(Annotation(rdfs:label "SLC2A1 tetramer transports Glc from cytosol to Golgi lumen") "Reactome:R-HSA-5653873") +AnnotationAssertion(Annotation(rdfs:label "GLUT14 (SLC2A14) tetramer transports Glc from extracellular region to cytosol") "Reactome:R-HSA-8981553") +AnnotationAssertion(Annotation(rdfs:label "GLUT3 (SLC2A3) tetramer transports Glc from extracellular region to cytosol") "Reactome:R-HSA-8981564") +AnnotationAssertion(Annotation(rdfs:label "GLUT4 (SLC2A4) tetramer transports Glc from extracellular region to cytosol") "Reactome:R-HSA-8981570") +AnnotationAssertion(Annotation(rdfs:label "GLUT2 (SLC2A2) tetramer transports Glc from extracellular region to cytosol") "Reactome:R-HSA-8981574") +AnnotationAssertion(rdfs:label "D-glucose transmembrane transporter activity") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + # Class: (neuroblast division) AnnotationAssertion(Annotation( "PMID:11163136") Annotation( "PMID:11250167") "The process resulting in the physical partitioning and separation of a neuroblast into daughter cells. A neuroblast is any cell that will divide and give rise to a neuron.") @@ -28276,6 +33703,14 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (serotonin secretion, neurotransmission) + +AnnotationAssertion(Annotation( "GOC:dph") "The regulated release of serotonin by a cell, in which released serotonin acts as a neurotransmitter.") +AnnotationAssertion(rdfs:label "serotonin secretion, neurotransmission") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) + # Class: (embryonic process involved in female pregnancy) AnnotationAssertion(Annotation( "GOC:dph") "A reproductive process occurring in the embryo or fetus that allows the embryo or fetus to develop within the mother.") @@ -28300,6 +33735,13 @@ AnnotationAssertion(rdfs:label "posi EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +# Class: (olfactory pit development) + +AnnotationAssertion(Annotation( "GOC:dph") Annotation( "ISBN:0124020607") "The biological process whose specific outcome is the progression of the olfactory pit from an initial condition to its mature state. This process begins with the formation of the olfactory pit, which is an indentation of the olfactory placode, and ends when the pits hollows out to form the nasopharynx.") +AnnotationAssertion(rdfs:label "olfactory pit development") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (ciliary membrane) AnnotationAssertion(Annotation( "GOC:cilia") Annotation( "GOC:dph") Annotation( "GOC:rph") "The portion of the plasma membrane surrounding a cilium.") @@ -28974,6 +34416,44 @@ AnnotationAssertion(rdfs:label "lung SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (lung goblet cell differentiation) + +AnnotationAssertion(Annotation( "GOC:dph") Annotation( "GOC:mtg_lung") "The process in which a relatively unspecialized cell acquires specialized features of a lung goblet cell. A goblet cell is a cell of the epithelial lining that produces and secretes mucins.") +AnnotationAssertion(rdfs:label "lung goblet cell differentiation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (lobar bronchus epithelium development) + +AnnotationAssertion(Annotation( "GOC:dph") Annotation( "GOC:mtg_lung") "The biological process whose specific outcome is the progression of a lobar bronchus epithelium from an initial condition to its mature state. This process begins with the formation of the lobar bronchus epithelium and ends with the mature structure. The lobar bronchus epithelium is the tissue made up of epithelial cells that lines the inside of the lobar bronchus.") +AnnotationAssertion(rdfs:label "lobar bronchus epithelium development") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (lobar bronchus development) + +AnnotationAssertion(Annotation( "GOC:dph") Annotation( "GOC:mtg_lung") "The biological process whose specific outcome is the progression of a lobar bronchus from an initial condition to its mature state. This process begins with the formation of the lobar bronchus and ends with the mature structure. The lobar bronchus is the major airway within the respiratory tree that starts by division of the principal bronchi on both sides and ends at the point of its own subdivision into tertiary or segmental bronchi.") +AnnotationAssertion(rdfs:label "lobar bronchus development") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) + +# Class: (lobar bronchus mesenchyme development) + +AnnotationAssertion(Annotation( "GOC:dph") Annotation( "GOC:mtg_lung") "The biological process whose specific outcome is the progression of a lobar bronchus mesenchyme from an initial condition to its mature state. This process begins with the formation of the lobar bronchus mesenchyme and ends with the mature structure. The lobar bronchus mesenchyme is the mass of tissue composed of mesenchymal cells in the lobar bronchus.") +AnnotationAssertion(rdfs:label "lobar bronchus mesenchyme development") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (lung-associated mesenchyme development) + +AnnotationAssertion(Annotation( "GOC:dph") Annotation( "GOC:mtg_lung") "The biological process whose specific outcome is the progression of a lung-associated mesenchyme from an initial condition to its mature state. This process begins with the formation of lung-associated mesenchyme and ends with the mature structure. Lung-associated mesenchyme is the tissue made up of loosely connected mesenchymal cells in the lung.") +AnnotationAssertion(rdfs:label "lung-associated mesenchyme development") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (mesenchyme development) AnnotationAssertion(Annotation( "GOC:dph") "The process whose specific outcome is the progression of a mesenchymal tissue over time, from its formation to the mature structure. A mesenchymal tissue is made up of loosely packed stellate cells.") @@ -30067,6 +35547,33 @@ AnnotationAssertion(Annotation( "regulation of sclerotome development") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +# Class: (taste bud development) + +AnnotationAssertion(Annotation( "GOC:dph") "The progression of the taste bud over time, from its formation to the mature state. The taste bud is a specialized area of the tongue that contains taste receptors.") +AnnotationAssertion(rdfs:label "taste bud development") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (taste bud morphogenesis) + +AnnotationAssertion(Annotation( "GOC:dph") "The process in which the anatomical structures of the taste bud are generated and organized. The taste bud is a specialized area of the tongue that contains taste receptors.") +AnnotationAssertion(rdfs:label "taste bud morphogenesis") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (taste bud formation) + +AnnotationAssertion(Annotation( "GOC:dph") "The developmental process pertaining to the initial formation of the taste bud from unspecified parts. The taste bud is a specialized area of the tongue that contains taste receptors.") +AnnotationAssertion(rdfs:label "taste bud formation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (retina vasculature development in camera-type eye) AnnotationAssertion(Annotation( "GOC:BHF") Annotation( "GOC:dph") "The process whose specific outcome is the progression of the vasculature of the retina over time, from its formation to the mature structure.") @@ -30084,6 +35591,23 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (cerebellum vasculature development) + +AnnotationAssertion(Annotation( "GOC:dph") "The process whose specific outcome is the progression of the vasculature of the cerebellum over time, from its formation to the mature structure.") +AnnotationAssertion(rdfs:label "cerebellum vasculature development") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) + +# Class: (cerebellum vasculature morphogenesis) + +AnnotationAssertion(Annotation( "GOC:BHF") Annotation( "GOC:dph") "The process in which the vasculature of the cerebellum is generated and organized.") +AnnotationAssertion(rdfs:label "cerebellum vasculature morphogenesis") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (cornea development in camera-type eye) AnnotationAssertion(Annotation( "GOC:dph") "The progression of the cornea over time, from its formation to the mature structure. The cornea is the transparent structure that covers the anterior of the eye.") @@ -30282,6 +35806,32 @@ AnnotationAssertion(rdfs:label "hind EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +# Class: (norepinephrine secretion, neurotransmission) + +AnnotationAssertion(Annotation( "GOC:dph") "The regulated release of norepinephrine by a cell, in which the norepinephrine acts as a neurotransmitter.") +AnnotationAssertion(rdfs:label "norepinephrine secretion, neurotransmission") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) + +# Class: (gamma-aminobutyric acid secretion, neurotransmission) + +AnnotationAssertion(Annotation( "GOC:dph") "The regulated release of gamma-aminobutyric acid by a cell, in which the gamma-aminobutyric acid acts as a neurotransmitter.") +AnnotationAssertion(rdfs:label "gamma-aminobutyric acid secretion, neurotransmission") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (glutamate secretion, neurotransmission) + +AnnotationAssertion(Annotation( "GOC:dph") "The controlled release of glutamate by a cell, in which the glutamate acts as a neurotransmitter.") +AnnotationAssertion(rdfs:label "glutamate secretion, neurotransmission") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (ganglion development) AnnotationAssertion(Annotation( "GOC:dph") "The process whose specific outcome is the progression of a ganglion over time, from its formation to the mature structure.") @@ -30389,6 +35939,12 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (axon development) + +AnnotationAssertion(Annotation( "GOC:dph") Annotation( "GOC:pg") Annotation( "GOC:pr") "The progression of an axon over time. Covers axonogenesis (de novo generation of an axon) and axon regeneration (regrowth), as well as processes pertaining to the progression of the axon over time (fasciculation and defasciculation).") +AnnotationAssertion(rdfs:label "axon development") +SubClassOf( ) + # Class: (actin filament bundle organization) AnnotationAssertion(Annotation( "GOC:dph") "A process that results in the assembly, arrangement of constituent parts, or disassembly of an actin filament bundle.") @@ -30425,6 +35981,12 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (cytosolic lipolysis) + +AnnotationAssertion(Annotation( "GOC:autophagy") "The chemical reactions and pathways resulting in the breakdown of lipid droplets and hydrolysis of stored triglycerides occurring through the orchestrated activation of cytosolic lipases.") +AnnotationAssertion(rdfs:label "cytosolic lipolysis") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) + # Class: (secretory granule maturation) AnnotationAssertion(Annotation( "GOC:PARL") Annotation( "GOC:bf") Annotation( "GOC:dph") Annotation( "PMID:16618809") "Steps required to transform an immature secretory vesicle into a mature secretory vesicle. Typically proceeds through homotypic membrane fusion and membrane remodeling.") @@ -30432,6 +35994,12 @@ AnnotationAssertion(rdfs:label "secr EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +# Class: (antimicrobial humoral immune response mediated by antimicrobial peptide) + +AnnotationAssertion(Annotation( "PMID:15761415") Annotation( "PMID:24287494") "An immune response against microbes mediated by anti-microbial peptides in body fluid.") +AnnotationAssertion(rdfs:label "antimicrobial humoral immune response mediated by antimicrobial peptide") +SubClassOf( ) + # Class: (regulation of neuroblast migration) AnnotationAssertion(Annotation( "PMID:23149556") "Any process that modulates the frequency, rate or extent of neuroblast migration.") @@ -30533,6 +36101,12 @@ AnnotationAssertion(Annotation( "detection of stimulus involved in sensory perception of pain") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +# Class: (ionocyte differentiation) + +AnnotationAssertion(Annotation( "PMID:17555741") "The process in which a relatively unspecialized cell acquires specialized structural and/or functional features of an ionocyte. Ionocytes are specialized epithelial cells that contribute to osmotic homeostasis.") +AnnotationAssertion(rdfs:label "ionocyte differentiation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + # Class: (protein localization to postsynapse) AnnotationAssertion(Annotation( "PMID:31189538") "Any process in which a protein is transported to, and/or maintained at the postsynapse, the part of a synapse that is part of the post-synaptic cell.") @@ -30553,14 +36127,6 @@ AnnotationAssertion(rdfs:label "prot EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -# Class: (protein-DNA complex assembly) - -AnnotationAssertion(Annotation( "GOC:jl") "The aggregation, arrangement and bonding together of proteins and DNA molecules to form a protein-DNA complex.") -AnnotationAssertion(rdfs:label "protein-DNA complex assembly") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) - # Class: (biological regulation) AnnotationAssertion(Annotation( "GOC:dph") Annotation( "GOC:isa_complete") Annotation( "GOC:mah") Annotation( "GOC:pr") Annotation( "GOC:vw") "Any process that modulates a measurable attribute of any biological process, quality or function.") @@ -30826,6 +36392,34 @@ AnnotationAssertion(rdfs:label "exoc EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +# Class: (oligodendrocyte progenitor proliferation) + +AnnotationAssertion(Annotation( "GOC:mah") Annotation( "GOC:sl") Annotation( "PMID:15504915") "The multiplication or reproduction of oligodendrocyte progenitor cells by cell division, resulting in the expansion of their population. Oligodendrocyte progenitors give rise to oligodendrocytes, which form the insulating myelin sheath of axons in the central nervous system.") +AnnotationAssertion(rdfs:label "oligodendrocyte progenitor proliferation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (regulation of oligodendrocyte progenitor proliferation) + +AnnotationAssertion(Annotation( "GOC:mah") Annotation( "GOC:sl") "Any process that modulates the frequency, rate or extent of oligodendrocyte progenitor proliferation.") +AnnotationAssertion(rdfs:label "regulation of oligodendrocyte progenitor proliferation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (negative regulation of oligodendrocyte progenitor proliferation) + +AnnotationAssertion(Annotation( "GOC:mah") Annotation( "GOC:sl") "Any process that stops or decreases the rate or extent of oligodendrocyte progenitor proliferation.") +AnnotationAssertion(rdfs:label "negative regulation of oligodendrocyte progenitor proliferation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) + +# Class: (positive regulation of oligodendrocyte progenitor proliferation) + +AnnotationAssertion(Annotation( "GOC:mah") Annotation( "GOC:sl") "Any process that activates or increases the rate or extent of oligodendrocyte progenitor proliferation.") +AnnotationAssertion(rdfs:label "positive regulation of oligodendrocyte progenitor proliferation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) + # Class: (response to oxygen levels) AnnotationAssertion(Annotation( "GOC:BHF") Annotation( "GOC:mah") "Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus reflecting the presence, absence, or concentration of oxygen.") @@ -30908,8 +36502,8 @@ EquivalentClasses( ObjectIntersection AnnotationAssertion(Annotation( "GOC:BHF") Annotation( "GOC:mah") "Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of bile acids.") AnnotationAssertion(rdfs:label "regulation of bile acid biosynthetic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) SubClassOf( ) -SubClassOf( ) SubClassOf( ) SubClassOf( ) @@ -30918,8 +36512,8 @@ SubClassOf( "GOC:BHF") Annotation( "GOC:mah") "Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of bile acids.") AnnotationAssertion(rdfs:label "negative regulation of bile acid biosynthetic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) SubClassOf( ) -SubClassOf( ) SubClassOf( ) SubClassOf( ) @@ -30928,8 +36522,8 @@ SubClassOf( "GOC:BHF") Annotation( "GOC:mah") "Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of bile acids.") AnnotationAssertion(rdfs:label "positive regulation of bile acid biosynthetic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) SubClassOf( ) -SubClassOf( ) SubClassOf( ) SubClassOf( ) @@ -30996,6 +36590,12 @@ AnnotationAssertion(rdfs:label "esta EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +# Class: (cellular response to amino acid stimulus) + +AnnotationAssertion(Annotation( "GOC:mah") "Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amino acid stimulus. An amino acid is a carboxylic acids containing one or more amino groups.") +AnnotationAssertion(rdfs:label "cellular response to amino acid stimulus") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + # Class: (cellular response to ammonium ion) AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GO_REF:0000071") Annotation( "PMID:23509267") "Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ammonium stimulus.") @@ -31045,13 +36645,6 @@ AnnotationAssertion(Annotation( "cellular response to lipid") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -# Class: (cellular response to organonitrogen compound) - -AnnotationAssertion(Annotation( "GOC:mah") "Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an organonitrogen stimulus. An organonitrogen compound is formally a compound containing at least one carbon-nitrogen bond.") -AnnotationAssertion(rdfs:label "cellular response to organonitrogen compound") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) - # Class: (cellular response to amine stimulus) AnnotationAssertion(Annotation( "GOC:mah") "Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amine stimulus. An amine is a compound formally derived from ammonia by replacing one, two or three hydrogen atoms by hydrocarbyl groups.") @@ -31065,12 +36658,22 @@ AnnotationAssertion(rdfs:label "hema EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (cellular response to endogenous stimulus) +# Class: (otic vesicle development) + +AnnotationAssertion(Annotation( "GOC:mah") "The process whose specific outcome is the progression of the otic vesicle over time, from its formation to the mature structure. The otic vesicle is a transient embryonic structure formed during development of the vertebrate inner ear.") +AnnotationAssertion(rdfs:label "otic vesicle development") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) -AnnotationAssertion(Annotation( "GOC:mah") "Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus arising within the organism.") -AnnotationAssertion(rdfs:comment "Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC.") -AnnotationAssertion(rdfs:label "cellular response to endogenous stimulus") -SubClassOf( ) +# Class: (otic vesicle morphogenesis) + +AnnotationAssertion(Annotation( "GOC:mah") "The process in which the anatomical structures of the otic vesicle are generated and organized. The otic vesicle is a transient embryonic structure formed during development of the vertebrate inner ear.") +AnnotationAssertion(rdfs:label "otic vesicle morphogenesis") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (granulocyte chemotaxis) @@ -31185,6 +36788,30 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (olfactory placode development) + +AnnotationAssertion(Annotation( "GOC:mah") "The progression of the olfactory placode over time from its initial formation until its mature state. The olfactory placode is a thickening of the neural ectoderm in the head region of the vertebrate embryo which develops into the olfactory region of the nasal cavity.") +AnnotationAssertion(rdfs:label "olfactory placode development") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) + +# Class: (olfactory placode morphogenesis) + +AnnotationAssertion(Annotation( "GOC:mah") "The process in which the anatomical structures of the olfactory placode are generated and organized. The olfactory placode is a thickening of the neural ectoderm in the head region of the vertebrate embryo which develops into the olfactory region of the nasal cavity.") +AnnotationAssertion(rdfs:label "olfactory placode morphogenesis") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (olfactory placode maturation) + +AnnotationAssertion(Annotation( "GOC:mah") "A developmental process, independent of morphogenetic (shape) change, that is required for the olfactory placode to attain its fully functional state. The olfactory placode is a thickening of the neural ectoderm in the head region of the vertebrate embryo which develops into the olfactory region of the nasal cavity.") +AnnotationAssertion(rdfs:label "olfactory placode maturation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (nitrogen compound transport) AnnotationAssertion(Annotation( "GOC:mah") "The directed movement of nitrogen-containing compounds into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.") @@ -31231,12 +36858,6 @@ AnnotationAssertion(rdfs:comment "No AnnotationAssertion(rdfs:label "protein transmembrane transport") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) -# Class: (protein-DNA complex organization) - -AnnotationAssertion(Annotation( "GOC:mah") "Any process in which macromolecules aggregate, disaggregate, or are modified, resulting in the formation, disassembly, or alteration of a protein-DNA complex.") -AnnotationAssertion(rdfs:label "protein-DNA complex organization") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) - # Class: (protein-RNA complex organization) AnnotationAssertion(Annotation( "GOC:mah") "Any process in which macromolecules aggregate, disaggregate, or are modified, resulting in the formation, disassembly, or alteration of a ribonucleoprotein complex.") @@ -31295,12 +36916,6 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) -# Class: (DNA biosynthetic process) - -AnnotationAssertion(Annotation( "GOC:mah") "The biosynthetic process resulting in the formation of DNA.") -AnnotationAssertion(rdfs:label "DNA biosynthetic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) - # Class: (cell periphery) AnnotationAssertion(Annotation( "GOC:pdt") "The broad region around and including the plasma membrane of a cell, encompassing the cell cortex (inside the cell), the plasma membrane, and any external encapsulating structures.") @@ -31450,7 +37065,6 @@ EquivalentClasses( ObjectIntersection AnnotationAssertion(Annotation( "GOC:mah") "The chemical reactions and pathways involving diatomic oxygen (O2).") AnnotationAssertion(rdfs:label "oxygen metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) # Class: (establishment of protein localization to organelle) @@ -31459,6 +37073,14 @@ AnnotationAssertion(rdfs:label "esta EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +# Class: (maintenance of protein localization in organelle) + +AnnotationAssertion(Annotation( "GOC:mah") "Any process in which a protein is maintained in a specific location a specific location on or in an organelle, and is prevented from moving elsewhere. Encompasses establishment of localization in the membrane or lumen of a membrane-bounded organelle.") +AnnotationAssertion(rdfs:label "maintenance of protein localization in organelle") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (protein localization to membrane) AnnotationAssertion(Annotation( "GOC:mah") "A process in which a protein is transported to, or maintained in, a specific location in a membrane.") @@ -31485,6 +37107,14 @@ AnnotationAssertion(rdfs:label "esta EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +# Class: (maintenance of protein location in vacuole) + +AnnotationAssertion(Annotation( "GOC:mah") "Any process in which a protein is maintained in a specific location in a vacuole, and is prevented from moving elsewhere.") +AnnotationAssertion(rdfs:label "maintenance of protein location in vacuole") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (multinuclear osteoclast differentiation) AnnotationAssertion(Annotation( "CL:0000779") Annotation( "GOC:mah") Annotation( "PMID:12713016") "The process in which a relatively unspecialized monocyte acquires the specialized features of a multinuclear osteoclast. An osteoclast is a specialized phagocytic cell associated with the absorption and removal of the mineralized matrix of bone tissue.") @@ -31534,6 +37164,12 @@ AnnotationAssertion(rdfs:label "regu EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +# Class: (intracellular amino acid homeostasis) + +AnnotationAssertion(Annotation( "PMID:19955263") "A homeostatic process involved in the maintenance of a steady state level of amino acids within a cell.") +AnnotationAssertion(rdfs:label "intracellular amino acid homeostasis") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + # Class: (regulation of fertilization) AnnotationAssertion(Annotation( "GOC:DHL") Annotation( "PMID:20478994") "Any process that modulates the rate, frequency or extent of fertilization. Fertilization is the union of gametes of opposite sexes during the process of sexual reproduction to form a zygote. It involves the fusion of the gametic nuclei (karyogamy) and cytoplasm (plasmogamy).") @@ -31639,6 +37275,36 @@ AnnotationAssertion(Annotation( "SA node cell to atrial cardiac muscle cell communication") SubClassOf( ) +# Class: (L-glutamate transmembrane export from vacuole) + +AnnotationAssertion(Annotation( "PMID:21307582") "The directed movement of L-glutamate out of the vacuole, across the vacuolar membrane.") +AnnotationAssertion(rdfs:label "L-glutamate transmembrane export from vacuole") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) + +# Class: (amino acid import across plasma membrane) + +AnnotationAssertion(Annotation( "GOC:krc") Annotation( "PMID:8195186") "The directed movement of an amino acid from outside of a cell, across the plasma membrane and into the cytosol.") +AnnotationAssertion(rdfs:label "amino acid import across plasma membrane") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) + +# Class: (regulation of neutrophil chemotaxis) + +AnnotationAssertion(Annotation( "GOC:dph") Annotation( "GOC:tb") "Any process that modulates the frequency, rate, or extent of neutrophil chemotaxis. Neutrophil chemotaxis is the directed movement of a neutrophil cell, the most numerous polymorphonuclear leukocyte found in the blood, in response to an external stimulus, usually an infection or wounding.") +AnnotationAssertion(rdfs:label "regulation of neutrophil chemotaxis") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (positive regulation of neutrophil chemotaxis) + +AnnotationAssertion(Annotation( "GOC:dph") Annotation( "GOC:tb") "Any process that increases the frequency, rate, or extent of neutrophil chemotaxis. Neutrophil chemotaxis is the directed movement of a neutrophil cell, the most numerous polymorphonuclear leukocyte found in the blood, in response to an external stimulus, usually an infection or wounding.") +AnnotationAssertion(rdfs:label "positive regulation of neutrophil chemotaxis") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (negative regulation of neutrophil chemotaxis) + +AnnotationAssertion(Annotation( "GOC:dph") Annotation( "GOC:tb") "Any process that decreases the frequency, rate, or extent of neutrophil chemotaxis. Neutrophil chemotaxis is the directed movement of a neutrophil cell, the most numerous polymorphonuclear leukocyte found in the blood, in response to an external stimulus, usually an infection or wounding.") +AnnotationAssertion(rdfs:label "negative regulation of neutrophil chemotaxis") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + # Class: (regulation of monocyte chemotaxis) AnnotationAssertion(Annotation( "GOC:dph") Annotation( "GOC:tb") "Any process that modulates the frequency, rate, or extent of monocyte chemotaxis.") @@ -31729,6 +37395,12 @@ AnnotationAssertion(rdfs:label "esta EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +# Class: (Golgi to lysosome transport) + +AnnotationAssertion(Annotation( "GOC:ascb_2009") Annotation( "GOC:dph") Annotation( "GOC:tb") "The directed movement of substances from the Golgi to lysosomes.") +AnnotationAssertion(rdfs:label "Golgi to lysosome transport") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) + # Class: (establishment of epithelial cell polarity) AnnotationAssertion(Annotation( "GOC:ascb_2009") Annotation( "GOC:dph") Annotation( "GOC:tb") "The specification and formation of anisotropic intracellular organization of an epithelial cell.") @@ -31920,6 +37592,18 @@ AnnotationAssertion(rdfs:label "prot EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +# Class: (glutamate transmembrane import into vacuole) + +AnnotationAssertion(Annotation( "GOC:tb") "The directed movement of glutamate into the vacuole across the vacuolar membrane.") +AnnotationAssertion(rdfs:label "glutamate transmembrane import into vacuole") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) + +# Class: (intracellular glutamate homeostasis) + +AnnotationAssertion(Annotation( "GOC:tb") "A homeostatic process involved in the maintenance of a steady state level of glutamate within a cell.") +AnnotationAssertion(rdfs:label "intracellular glutamate homeostasis") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + # Class: (catecholamine uptake) AnnotationAssertion(Annotation( "GOC:dph") Annotation( "GOC:tb") "The directed movement of catecholamine into a cell.") @@ -31934,6 +37618,12 @@ AnnotationAssertion(rdfs:label "mese EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +# Class: (L-glutamate transmembrane import into vacuole) + +AnnotationAssertion(Annotation( "GOC:al") "The directed movement of L-glutamate into the vacuole across the vacuolar membrane.") +AnnotationAssertion(rdfs:label "L-glutamate transmembrane import into vacuole") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) + # Class: (sensory organ morphogenesis) AnnotationAssertion(Annotation( "GOC:kmv") Annotation( "ISBN:978-0199210893") "Morphogenesis of a sensory organ. A sensory organ is defined as a tissue or set of tissues that work together to receive and transmit signals from external or internal stimuli. Morphogenesis is the process in which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions.") @@ -31998,6 +37688,13 @@ AnnotationAssertion(Annotation( "type B pancreatic cell apoptotic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +# Class: (L-glutamate biosynthetic process) + +AnnotationAssertion(Annotation( "GOC:yaf") "The chemical reactions and pathways resulting in the formation of L-glutamate, the L enantiomer anion of 2-aminopentanedioic acid.") +AnnotationAssertion(rdfs:label "L-glutamate biosynthetic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) + # Class: (synaptic membrane) AnnotationAssertion(Annotation( "GOC:BHF") Annotation( "PMID:20410104") "A specialized area of membrane on either the presynaptic or the postsynaptic side of a synapse, the junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell.") @@ -32021,6 +37718,13 @@ AnnotationAssertion(rdfs:label "mese EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +# Class: (GABAergic neuron differentiation) + +AnnotationAssertion(Annotation( "GOC:kmv") Annotation( "PMID:11517269") "The process in which a neuroblast acquires the specialized structural and functional features of a GABAergic neuron.") +AnnotationAssertion(rdfs:label "GABAergic neuron differentiation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) + # Class: (ammonium ion metabolic process) AnnotationAssertion(Annotation( "GOC:dhl") Annotation( "GOC:tb") Annotation( "PMID:14671018") "The chemical reactions and pathways involving the ammonium ion.") @@ -32057,6 +37761,13 @@ SubClassOf( ObjectSomeValuesFrom( "GOC:pr") "Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxic stimulus.") AnnotationAssertion(rdfs:label "cellular response to toxic substance") +# Class: (oligodendrocyte apoptotic process) + +AnnotationAssertion(Annotation( "CL:0000128") Annotation( "GOC:mtg_apoptosis") Annotation( "GOC:yaf") Annotation( "PMID:16723520") "Any apoptotic process in an oligodendrocyte. Oligodendrocytes belong to a class of large neuroglial (macroglial) cells in the central nervous system, where they form the insulating myelin sheath of axons.") +AnnotationAssertion(rdfs:label "oligodendrocyte apoptotic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) + # Class: (renal tubular secretion) AnnotationAssertion(Annotation( "GOC:rph") Annotation( "PMID:25287933") Annotation( "Wikipedia:Renal_secretion#Secretion") "The elimination of substances from peritubular capillaries (or surrounding hemolymph in invertebrates) into the renal tubules to be incorporated subsequently into the urine. Substances that are secreted include organic anions, ammonia, potassium and drugs.") @@ -32077,12 +37788,28 @@ AnnotationAssertion(rdfs:label "intr EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +# Class: (keratinocyte apoptotic process) + +AnnotationAssertion(Annotation( "CL:0000312") Annotation( "GOC:jc") Annotation( "GOC:mtg_apoptosis") Annotation( "PMID:10201527") "Any apoptotic process in a keratinocyte. A keratinocyte is an epidermal cell which synthesizes keratin and undergoes a characteristic change as it moves upward from the basal layers of the epidermis to the cornified (horny) layer of the skin.") +AnnotationAssertion(rdfs:label "keratinocyte apoptotic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) +SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) +DisjointClasses( ObjectSomeValuesFrom( )) + # Class: (hepatocyte apoptotic process) AnnotationAssertion(Annotation( "CL:0000182") Annotation( "GOC:jc") Annotation( "GOC:mtg_apoptosis") Annotation( "PMID:15856020") "Any apoptotic process in a hepatocyte, the main structural component of the liver.") AnnotationAssertion(rdfs:label "hepatocyte apoptotic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +# Class: (melanocyte migration) + +AnnotationAssertion(Annotation( "CL:0000148") Annotation( "GOC:uh") Annotation( "PMID:22637532") "The orderly movement of melanocytes from one site to another, often during the development of a multicellular organism. A melanocyte is a pigment cell derived from the neural crest. It contains melanin-filled pigment granules, which give a brown to black appearance.") +AnnotationAssertion(rdfs:label "melanocyte migration") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) + # Class: (protein localization to heterochromatin) AnnotationAssertion(Annotation( "GOC:mah") "Any process in which a protein is transported to, or maintained at, a part of a chromosome that is organized into heterochromatin.") @@ -32119,6 +37846,14 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) +# Class: (Schwann cell microvillus) + +AnnotationAssertion(Annotation( "NIF_Subcellular:sao1890444066") Annotation( "PMID:15988042") "Small finger-like extension of a Schwann cell that contacts the nodal membrane.") +AnnotationAssertion( "NIF_Subcellular:sao1890444066") +AnnotationAssertion(rdfs:label "Schwann cell microvillus") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) + # Class: (retinal rod cell apoptotic process) AnnotationAssertion(Annotation( "CL:0000604") Annotation( "GOC:jc") Annotation( "PMID:17202487") "Any apoptotic process in a retinal rod cell, one of the two photoreceptor cell types of the vertebrate retina.") @@ -32231,6 +37966,25 @@ AnnotationAssertion(rdfs:label "skel EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +# Class: (defense response to other organism) + +AnnotationAssertion(Annotation( "GOC:dos") "Reactions triggered in response to the presence of another organism that act to protect the cell or organism from damage caused by that organism.") +AnnotationAssertion(rdfs:label "defense response to other organism") +SubClassOf( ) + +# Class: (maintenance of protein complex location) + +AnnotationAssertion(Annotation( "GOC:dos") "Any process in which a protein complex is maintained in a location and prevented from moving elsewhere. These include sequestration, stabilization to prevent transport elsewhere and the active retrieval of protein complexes that move away.") +AnnotationAssertion(rdfs:label "maintenance of protein complex location") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) + +# Class: (maintenance of protein complex location in cytoplasm) + +AnnotationAssertion(Annotation( "GOC:dos") "Any process in which a protein complex is maintained in a specific location within the cytoplasm and is prevented from moving elsewhere.") +AnnotationAssertion(rdfs:label "maintenance of protein complex location in cytoplasm") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) + # Class: (bounding membrane of organelle) AnnotationAssertion(Annotation( "GOC:dos") "The lipid bilayer that forms the outer-most layer of an organelle.") @@ -32246,6 +38000,12 @@ AnnotationAssertion(rdfs:comment "No AnnotationAssertion(rdfs:label "plasma membrane region") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +# Class: (mucin granule) + +AnnotationAssertion(Annotation( "PMID:16377632") "A secretory granule that contains mucin.") +AnnotationAssertion(rdfs:label "mucin granule") +SubClassOf( ) + # Class: (cell-cell adhesion) AnnotationAssertion(Annotation( "GOC:dos") "The attachment of one cell to another cell via adhesion molecules.") @@ -32310,6 +38070,24 @@ AnnotationAssertion(Annotation( "import into cell") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +# Class: (carbohydrate import across plasma membrane) + +AnnotationAssertion(Annotation( "GOC:dos") "The directed movement of a carbohydrate from outside of a cell, across the plasma membrane and into the cytosol.") +AnnotationAssertion(rdfs:label "carbohydrate import across plasma membrane") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) + +# Class: (D-glucose import across plasma membrane) + +AnnotationAssertion(Annotation( "GOC:dos") "The directed movement of D-glucose from outside of a cell, across the plasma membrane and into the cytosol.") +AnnotationAssertion(rdfs:label "D-glucose import across plasma membrane") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) + +# Class: (L-glutamate import across plasma membrane) + +AnnotationAssertion(Annotation( "GOC:dos") "The directed movement of L-glutamate from outside of a cell, across the plasma membrane and into the cytosol.") +AnnotationAssertion(rdfs:label "L-glutamate import across plasma membrane") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) + # Class: (asymmetric stem cell division) AnnotationAssertion(Annotation( "GOC:dos") Annotation( "PMID:18513950") "Division of a stem cell during which it retains its identity and buds off a daughter cell with a new identity.") @@ -32329,6 +38107,20 @@ AnnotationAssertion(Annotation( "germline stem cell asymmetric division") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +# Class: (import across plasma membrane) + +AnnotationAssertion(Annotation( "GOC:dos") "The directed movement of some substance from outside of a cell, across the plasma membrane and into the cytosol.") +AnnotationAssertion(rdfs:label "import across plasma membrane") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) + +# Class: (cerebellar neuron development) + +AnnotationAssertion(Annotation( "GOC:dos") "The process whose specific outcome is the progression of a cerebellar neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell.") +AnnotationAssertion(rdfs:label "cerebellar neuron development") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (bone cell development) AnnotationAssertion(Annotation( "GOC:dos") "The process whose specific outcome is the progression of a bone cell over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell.") @@ -32527,6 +38319,13 @@ AnnotationAssertion(rdfs:label "pres EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +# Class: (axonal transport) + +AnnotationAssertion(Annotation( "ISBN:0815316194") "The directed movement of organelles or molecules along microtubules in axons.") +AnnotationAssertion( "Wikipedia:Axoplasmic_transport") +AnnotationAssertion(rdfs:label "axonal transport") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) + # Class: (postsynaptic actin cytoskeleton organization) AnnotationAssertion(Annotation( "GOC:dos") "A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins in the postsynaptic actin cytoskeleton.") @@ -32540,6 +38339,20 @@ AnnotationAssertion(Annotation( "postsynapse of neuromuscular junction") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +# Class: (glutamatergic synapse) + +AnnotationAssertion(Annotation( "GOC:dos") "A synapse that uses glutamate as a neurotransmitter.") +AnnotationAssertion(rdfs:label "glutamatergic synapse") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) + +# Class: (GABA-ergic synapse) + +AnnotationAssertion(Annotation( "GOC:dos") "A synapse that uses GABA as a neurotransmitter. These synapses are typically inhibitory.") +AnnotationAssertion(rdfs:label "GABA-ergic synapse") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) + # Class: (neuronal dense core vesicle) AnnotationAssertion(Annotation( "GOC:dos") Annotation( "ISBN:978-0-07-181001-2") Annotation( "Wikipedia:Neuropeptide&oldid=713905176") "A dense core vesicle (granule) that is part of a neuron. These vesicles typically contain neuropeptides. They can be found in all parts of neurons, including the soma, dendrites, axonal swellings (varicosities) and synaptic terminals.") @@ -32656,6 +38469,12 @@ AnnotationAssertion(Annotation( "trans-synaptic signaling via exosome") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +# Class: (postsynaptic intermediate filament cytoskeleton) + +AnnotationAssertion(Annotation( "GOC:dos") Annotation( "PMID:25869803") "The intermediate filament cytoskeleton that is part of a postsynapse.") +AnnotationAssertion(rdfs:label "postsynaptic intermediate filament cytoskeleton") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + # Class: (postsynaptic modulation of chemical synaptic transmission) AnnotationAssertion(Annotation( "GOC:dos") "Any process, acting in the postsynapse that results in modulation of chemical synaptic transmission.") @@ -32704,6 +38523,19 @@ AnnotationAssertion(Annotation( "regulation of trans-synaptic signaling") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +# Class: (presynaptic intermediate filament cytoskeleton) + +AnnotationAssertion(Annotation( "GOC:dos") "The intermediate filament cytoskeleton that is part of a presynapse.") +AnnotationAssertion(rdfs:label "presynaptic intermediate filament cytoskeleton") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (postsynaptic intermediate filament cytoskeleton organization) + +AnnotationAssertion(Annotation( "GOC:dos") "A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprised of intermediate filament and their associated proteins in the postsynaptic cytoskeleton.") +AnnotationAssertion(rdfs:label "postsynaptic intermediate filament cytoskeleton organization") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (presynaptic cytoskeleton organization) AnnotationAssertion(Annotation( "GOC:dos") "A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures and their associated proteins in the presynaptic cytoskeleton.") @@ -32765,6 +38597,33 @@ AnnotationAssertion(Annotation( "vesicle cytoskeletal trafficking") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +# Class: (dense core granule cytoskeletal transport) + +AnnotationAssertion(Annotation( "GOC:kmv") Annotation( "PMID:23358451") "The directed movement of dense core granules along cytoskeletal fibers, such as microtubules or actin filaments.") +AnnotationAssertion(rdfs:label "dense core granule cytoskeletal transport") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) + +# Class: (cytosolic region) + +AnnotationAssertion(Annotation( "GOC:dos") "Any (proper) part of the cytosol of a single cell of sufficient size to still be considered cytosol.") +AnnotationAssertion(rdfs:label "cytosolic region") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (presynaptic cytosol) + +AnnotationAssertion(Annotation( "GOC:dos") "The region of the cytosol consisting of all cytosol that is part of the presynapse.") +AnnotationAssertion(rdfs:label "presynaptic cytosol") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) + +# Class: (postsynaptic cytosol) + +AnnotationAssertion(Annotation( "GOC:dos") "The region of the cytosol consisting of all cytosol that is part of the postsynapse.") +AnnotationAssertion(rdfs:label "postsynaptic cytosol") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) + # Class: (presynaptic process involved in chemical synaptic transmission) AnnotationAssertion(Annotation( "GOC:dos") "The pathway leading to secretion of a neurotransmitter from the presynapse as part of synaptic transmission.") @@ -32903,6 +38762,12 @@ AnnotationAssertion(rdfs:comment "No AnnotationAssertion(rdfs:label "regulation of translation at postsynapse, modulating synaptic transmission") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +# Class: (protein localization to axon) + +AnnotationAssertion(Annotation( "GOC:dos") Annotation( "PMID:26157139") "A process in which a protein is transported to or maintained in a location within an axon.") +AnnotationAssertion(rdfs:label "protein localization to axon") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + # Class: (protein transport within plasma membrane) AnnotationAssertion(Annotation( "GOC:dos") "A process in which protein is transported from one region of the plasma membrane to another.") @@ -32916,6 +38781,19 @@ AnnotationAssertion(rdfs:label "axo- EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) +# Class: (anterograde axonal protein transport) + +AnnotationAssertion(Annotation( "GOC:dos") "The directed movement of proteins along microtubules from the cell body toward the cell periphery in nerve cell axons.") +AnnotationAssertion(rdfs:label "anterograde axonal protein transport") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) + +# Class: (retrograde axonal protein transport) + +AnnotationAssertion(Annotation( "ISBN:0815316194") "The directed movement of proteins along microtubules from the cell periphery toward the cell body in nerve cell axons.") +AnnotationAssertion(rdfs:label "retrograde axonal protein transport") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) + # Class: (signal release from synapse) AnnotationAssertion(Annotation( "GOC:dos") "Any signal release from a synapse.") @@ -33135,13 +39013,31 @@ AnnotationAssertion(Annotation( "negative regulation of myotube cell migration") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -# Class: (cellular anatomical entity) +# Class: (cellular anatomical structure) -AnnotationAssertion(Annotation( "GOC:kmv") "A part of a cellular organism that is either an immaterial entity or a material entity with granularity above the level of a protein complex but below that of an anatomical system. Or, a substance produced by a cellular organism with granularity above the level of a protein complex.") -AnnotationAssertion(rdfs:label "cellular anatomical entity") +AnnotationAssertion(Annotation( "GOC:kmv") "A part of a cellular organism consisting of a material entity with granularity above the level of a protein complex but below that of an anatomical system. Note that cellular organisms exclude viruses.") +AnnotationAssertion(rdfs:label "cellular anatomical structure") SubClassOf( ) SubClassOf( ) +# Class: (regulation of glutamatergic neuron differentiation) + +AnnotationAssertion(Annotation( "PMID:24030726") "Any process that modulates the frequency, rate or extent of glutamatergic neuron differentiation.") +AnnotationAssertion(rdfs:label "regulation of glutamatergic neuron differentiation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (negative regulation of glutamatergic neuron differentiation) + +AnnotationAssertion(Annotation( "PMID:24030726") "Any process that stops, prevents or reduces the frequency, rate or extent of glutamatergic neuron differentiation.") +AnnotationAssertion(rdfs:label "negative regulation of glutamatergic neuron differentiation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (positive regulation of glutamatergic neuron differentiation) + +AnnotationAssertion(Annotation( "PMID:24030726") "Any process that activates or increases the frequency, rate or extent of glutamatergic neuron differentiation.") +AnnotationAssertion(rdfs:label "positive regulation of glutamatergic neuron differentiation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + # Class: (plasma membrane bounded cell projection) AnnotationAssertion(Annotation( "GOC:krc") "A prolongation or process extending from a cell and that is bounded by plasma membrane, e.g. a cilium, lamellipodium, or axon.") @@ -33247,6 +39143,23 @@ AnnotationAssertion(Annotation( "regulation of blastocyst development") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +# Class: (larynx morphogenesis) + +AnnotationAssertion(Annotation( "GOC:krc") Annotation( "PMID:28177282") "The process in which the larynx is generated and organized. The larynx is a continuation of the pharynx that is involved in breathing, sound production, and protecting the trachea against food aspiration.") +AnnotationAssertion(rdfs:label "larynx morphogenesis") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (larynx development) + +AnnotationAssertion(Annotation( "GOC:krc") Annotation( "PMID:28177282") "The biological process whose specific outcome is the progression of a larynx from an initial condition to its mature state. This process begins with the formation of the larynx and ends with the mature structure. A larynx is a continuation of the pharynx that is involved in breathing, sound production, and protecting the trachea against food aspiration.") +AnnotationAssertion(rdfs:label "larynx development") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (protein localization to motile cilium) AnnotationAssertion(Annotation( "GOC:krc") Annotation( "PMID:27486780") "A process in which a protein is transported to, or maintained in, a location within a motile cilium.") @@ -33254,6 +39167,33 @@ AnnotationAssertion(rdfs:label "prot EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +# Class: (cerebral blood circulation) + +AnnotationAssertion(Annotation( "GOC:krc") Annotation( "PMID:25397684") "The flow of blood through the network of arteries and veins supplying the cerebrum, enabling the transport of nutrients to the tissues and the removal of waste products.") +AnnotationAssertion(rdfs:label "cerebral blood circulation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) + +# Class: (regulation of cerebral blood circulation) + +AnnotationAssertion(Annotation( "GOC:krc") Annotation( "PMID:25397684") "Any process that modulates the frequency, rate or extent of cerebral blood circulation.") +AnnotationAssertion(rdfs:label "regulation of cerebral blood circulation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (positive regulation of cerebral blood circulation) + +AnnotationAssertion(Annotation( "GOC:krc") Annotation( "PMID:25397684") "Any process that activates or increases the frequency, rate or extent of cerebral blood circulation.") +AnnotationAssertion(rdfs:label "positive regulation of cerebral blood circulation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (negative regulation of cerebral blood circulation) + +AnnotationAssertion(Annotation( "GOC:krc") Annotation( "PMID:25397684") "Any process that stops, prevents or reduces the frequency, rate or extent of cerebral blood circulation.") +AnnotationAssertion(rdfs:label "negative regulation of cerebral blood circulation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) + # Class: (regulation of pigmentation) AnnotationAssertion(Annotation( "GOC:krc") "Any process that modulates the frequency, rate or extent of the deposition or modulates the distribution of coloring matter in an organism.") @@ -33316,42 +39256,30 @@ AnnotationAssertion(Annotation( "positive regulation of lipoprotein transport") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -# Class: (catalytic activity, acting on a protein) - -AnnotationAssertion(Annotation( "GOC:molecular_function_refactoring") Annotation( "GOC:pdt") "Catalytic activity that acts to modify a protein.") -AnnotationAssertion(rdfs:label "catalytic activity, acting on a protein") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) - -# Class: (catalytic activity, acting on DNA) - -AnnotationAssertion(Annotation( "GOC:molecular_function_refactoring") Annotation( "GOC:pdt") "Catalytic activity that acts to modify DNA.") -AnnotationAssertion(rdfs:label "catalytic activity, acting on DNA") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) - -# Class: (catalytic activity, acting on RNA) - -AnnotationAssertion(Annotation( "GOC:molecular_function_refactoring") Annotation( "GOC:pdt") "Catalytic activity that acts to modify RNA, driven by ATP hydrolysis.") -AnnotationAssertion(rdfs:label "catalytic activity, acting on RNA") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) - -# Class: (catalytic activity, acting on a glycoprotein) - -AnnotationAssertion(Annotation( "GOC:molecular_function_refactoring") Annotation( "GOC:pdt") "Catalysis of a biochemical reaction at physiological temperatures in which one of the substrates is a glycoprotein.") -AnnotationAssertion(rdfs:label "catalytic activity, acting on a glycoprotein") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) - # Class: (extracellular vesicle biogenesis) AnnotationAssertion(Annotation( "PMID:28736435") "The assembly and secretion a set of components to form an extracellular vesicule, a membrane-bounded vesicle that is released into the extracellular region. Extracellular vesicles include exosomes, microvesicles and apoptotic bodies, based on the mechanism by which they are released from cells and differentiated based on their size and content.") AnnotationAssertion(rdfs:label "extracellular vesicle biogenesis") SubClassOf( ) +# Class: (export across plasma membrane) + +AnnotationAssertion(Annotation( "GOC:pg") "The directed movement of some substance from inside of a cell, across the plasma membrane and into the extracellular region.") +AnnotationAssertion(rdfs:label "export across plasma membrane") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) + # Class: (positive regulation of lymphocyte chemotaxis) AnnotationAssertion(Annotation( "PMID:19255442") "Any process that activates or increases the frequency, rate or extent of lymphocyte chemotaxis.") AnnotationAssertion(rdfs:label "positive regulation of lymphocyte chemotaxis") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +# Class: (ammonium import across plasma membrane) + +AnnotationAssertion(Annotation( "GOC:vw") Annotation( "PMID:16999738") "The directed movement of an ammonium ion from outside of a cell, across the plasma membrane and into the cytosol.") +AnnotationAssertion(rdfs:label "ammonium import across plasma membrane") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) + # Class: (translation at presynapse) AnnotationAssertion(Annotation( "PMID:27321671") "Translation that occurs at the presynapse.") @@ -33472,6 +39400,12 @@ AnnotationAssertion(rdfs:label "cell SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (hexose import across plasma membrane) + +AnnotationAssertion(Annotation( "PMID:10735857") "The directed movement of hexose from outside of a cell, across the plasma membrane and into the cytosol.") +AnnotationAssertion(rdfs:label "hexose import across plasma membrane") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) + # Class: (protein transporter activity) AnnotationAssertion(Annotation( "PMID:18706423") "Directly binding to a specific protein and delivering it to a specific cellular location.") @@ -33507,6 +39441,12 @@ AnnotationAssertion(Annotation( "nuclear protein-containing complex") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +# Class: (defense response to symbiont) + +AnnotationAssertion(Annotation( "GOC:pg") "Reactions triggered in response to the presence of a symbiont that act to protect or prevent damage to the host.") +AnnotationAssertion(rdfs:label "defense response to symbiont") +SubClassOf( ) + # Class: (vacuole fission) AnnotationAssertion(Annotation( "PMID:19643199") "The division of a vacuole within a cell to form two or more separate vacuoles.") @@ -33514,10 +39454,17 @@ AnnotationAssertion(rdfs:label "vacu EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -# Class: (non-membrane-bounded organelle assembly) +# Class: (radial glia-guided pyramidal neuron migration) + +AnnotationAssertion(Annotation( "PMID:3760547") "The radial migration of a pyramidal neuron along radial glial cells.") +AnnotationAssertion(rdfs:label "radial glia-guided pyramidal neuron migration") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) + +# Class: (membraneless organelle assembly) AnnotationAssertion(Annotation( "PMID:28225081") "The aggregation, arrangement and bonding together of a set of components to form a non-membrane-bounded organelle.") -AnnotationAssertion(rdfs:label "non-membrane-bounded organelle assembly") +AnnotationAssertion(rdfs:label "membraneless organelle assembly") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) # Class: (ammonium excretion) @@ -33526,6 +39473,12 @@ AnnotationAssertion(Annotation( "ammonium excretion") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +# Class: (cytosol to Golgi apparatus transport) + +AnnotationAssertion(Annotation( "PMID:28373556") "The directed movement of substances from the cytosol into the Golgi apparatus of a cell.") +AnnotationAssertion(rdfs:label "cytosol to Golgi apparatus transport") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) + # Class: (multicellular organismal-level chemical homeostasis) AnnotationAssertion(Annotation( "GOC:curators") "A homeostatic process involved in the maintenance of a steady state level of a chemical within extracellular body fluids, such as blood, xylem or phloem, of a multicellular organism. This is distinct from maintenance of cellular homeostasis, which occurs within a cell.") @@ -33656,6 +39609,12 @@ AnnotationAssertion(rdfs:label "soma EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +# Class: (catecholamine secretion, neurotransmission) + +AnnotationAssertion(Annotation( "PMID:10191060") "The regulated release of catecholamine by a cell in which the catecholamine acts as a neurotransmitter.") +AnnotationAssertion(rdfs:label "catecholamine secretion, neurotransmission") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + # Class: (chordate pharynx development) AnnotationAssertion(Annotation( "PMID:23020903") "The process whose specific outcome is the progression of cordate pharynx over time, from its formation to the mature structure.") @@ -33757,6 +39716,42 @@ AnnotationAssertion(rdfs:label "posi EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +# Class: (regulation of oligodendrocyte apoptotic process) + +AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GOC:yaf") "Any process that modulates the frequency, rate or extent of oligodendrocyte apoptotic process.") +AnnotationAssertion(rdfs:label "regulation of oligodendrocyte apoptotic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (negative regulation of oligodendrocyte apoptotic process) + +AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GOC:yaf") "Any process that stops, prevents or reduces the frequency, rate or extent of oligodendrocyte apoptotic process.") +AnnotationAssertion(rdfs:label "negative regulation of oligodendrocyte apoptotic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (positive regulation of oligodendrocyte apoptotic process) + +AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GOC:yaf") "Any process that activates or increases the frequency, rate or extent of oligodendrocyte apoptotic process.") +AnnotationAssertion(rdfs:label "positive regulation of oligodendrocyte apoptotic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (regulation of Schwann cell migration) + +AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GOC:sjw") "Any process that modulates the frequency, rate or extent of Schwann cell migration.") +AnnotationAssertion(rdfs:label "regulation of Schwann cell migration") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (negative regulation of Schwann cell migration) + +AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GOC:sjw") "Any process that stops, prevents or reduces the frequency, rate or extent of Schwann cell migration.") +AnnotationAssertion(rdfs:label "negative regulation of Schwann cell migration") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (positive regulation of Schwann cell migration) + +AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GOC:sjw") "Any process that activates or increases the frequency, rate or extent of Schwann cell migration.") +AnnotationAssertion(rdfs:label "positive regulation of Schwann cell migration") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + # Class: (regulation of defense response to fungus) AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GOC:dhl") Annotation( "PMID:22242006") "Any process that modulates the frequency, rate or extent of defense response to fungus.") @@ -33799,6 +39794,25 @@ AnnotationAssertion(Annotation( "positive regulation of oocyte maturation") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +# Class: (regulation of cytoplasmic translational elongation) + +AnnotationAssertion(Annotation( "GOC:TermGenie") "Any process that modulates the frequency, rate or extent of cytoplasmic translational elongation.") +AnnotationAssertion(rdfs:label "regulation of cytoplasmic translational elongation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (negative regulation of cytoplasmic translational elongation) + +AnnotationAssertion(Annotation( "GOC:TermGenie") "Any process that stops, prevents or reduces the frequency, rate or extent of cytoplasmic translational elongation.") +AnnotationAssertion(rdfs:label "negative regulation of cytoplasmic translational elongation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (positive regulation of cytoplasmic translational elongation) + +AnnotationAssertion(Annotation( "GOC:TermGenie") "Any process that activates or increases the frequency, rate or extent of cytoplasmic translational elongation.") +AnnotationAssertion(rdfs:label "positive regulation of cytoplasmic translational elongation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + # Class: (negative regulation of defense response to insect) AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "PMID:22474183") "Any process that stops, prevents or reduces the frequency, rate or extent of defense response to insect.") @@ -33835,9 +39849,18 @@ AnnotationAssertion(Annotation( "insulin metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) +SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) +SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) +SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) +SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) +SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) +DisjointClasses( ObjectSomeValuesFrom( )) +DisjointClasses( ObjectSomeValuesFrom( )) DisjointClasses( ObjectSomeValuesFrom( )) +DisjointClasses( ObjectSomeValuesFrom( )) # Class: (insulin catabolic process) @@ -33858,7 +39881,6 @@ EquivalentClasses( ObjectIntersection AnnotationAssertion(Annotation( "GOC:TermGenie") "The chemical reactions and pathways involving primary amino compound.") AnnotationAssertion(rdfs:label "primary amino compound metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) # Class: (primary amino compound catabolic process) @@ -33998,6 +40020,26 @@ AnnotationAssertion(rdfs:label "posi EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (regulation of lung goblet cell differentiation) + +AnnotationAssertion(Annotation( "GOC:BHF") Annotation( "GOC:TermGenie") "Any process that modulates the frequency, rate or extent of lung goblet cell differentiation.") +AnnotationAssertion(rdfs:label "regulation of lung goblet cell differentiation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (negative regulation of lung goblet cell differentiation) + +AnnotationAssertion(Annotation( "GOC:BHF") Annotation( "GOC:TermGenie") "Any process that stops, prevents or reduces the frequency, rate or extent of lung goblet cell differentiation.") +AnnotationAssertion(rdfs:label "negative regulation of lung goblet cell differentiation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (positive regulation of lung goblet cell differentiation) + +AnnotationAssertion(Annotation( "GOC:BHF") Annotation( "GOC:TermGenie") "Any process that activates or increases the frequency, rate or extent of lung goblet cell differentiation.") +AnnotationAssertion(rdfs:label "positive regulation of lung goblet cell differentiation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (regulation of vasculature development) AnnotationAssertion(Annotation( "GOC:TermGenie") "Any process that modulates the frequency, rate or extent of vasculature development.") @@ -34058,24 +40100,30 @@ AnnotationAssertion(Annotation( "positive regulation of endothelial cell development") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -# Class: (organonitrogen compound metabolic process) +# Class: (axon microtubule bundle) + +AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "NIF_Subcellular:sao707332678") "An arrangement of closely apposed microtubules running parallel to each other in the axon hillock and initial segment.") +AnnotationAssertion( "NIF_Subcellular:sao707332678") +AnnotationAssertion(rdfs:label "axon microtubule bundle") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GOC:pr") "The chemical reactions and pathways involving organonitrogen compound.") -AnnotationAssertion(rdfs:label "organonitrogen compound metabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +# Class: (alpha-amino acid metabolic process) -# Class: (organonitrogen compound catabolic process) +AnnotationAssertion(Annotation( "GOC:TermGenie") "The chemical reactions and pathways involving an alpha-amino acid.") +AnnotationAssertion(rdfs:label "alpha-amino acid metabolic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GOC:pr") "The chemical reactions and pathways resulting in the breakdown of organonitrogen compound.") -AnnotationAssertion(rdfs:label "organonitrogen compound catabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +# Class: (alpha-amino acid catabolic process) -# Class: (organonitrogen compound biosynthetic process) +AnnotationAssertion(Annotation( "GOC:TermGenie") "The chemical reactions and pathways resulting in the breakdown of an alpha-amino acid.") +AnnotationAssertion(rdfs:label "alpha-amino acid catabolic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GOC:pr") "The chemical reactions and pathways resulting in the formation of organonitrogen compound.") -AnnotationAssertion(rdfs:label "organonitrogen compound biosynthetic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +# Class: (alpha-amino acid biosynthetic process) + +AnnotationAssertion(Annotation( "GOC:TermGenie") "The chemical reactions and pathways resulting in the formation of an alpha-amino acid.") +AnnotationAssertion(rdfs:label "alpha-amino acid biosynthetic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) # Class: (regulation of vesicle transport along microtubule) @@ -34195,6 +40243,24 @@ AnnotationAssertion(Annotation( "mesenchymal cell differentiation involved in bone development") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +# Class: (regulation of gamma-aminobutyric acid catabolic process) + +AnnotationAssertion(Annotation( "GOC:TermGenie") "Any process that modulates the frequency, rate or extent of gamma-aminobutyric acid catabolic process.") +AnnotationAssertion(rdfs:label "regulation of gamma-aminobutyric acid catabolic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (negative regulation of gamma-aminobutyric acid catabolic process) + +AnnotationAssertion(Annotation( "GOC:TermGenie") "Any process that stops, prevents or reduces the frequency, rate or extent of gamma-aminobutyric acid catabolic process.") +AnnotationAssertion(rdfs:label "negative regulation of gamma-aminobutyric acid catabolic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (positive regulation of gamma-aminobutyric acid catabolic process) + +AnnotationAssertion(Annotation( "GOC:TermGenie") "Any process that activates or increases the frequency, rate or extent of gamma-aminobutyric acid catabolic process.") +AnnotationAssertion(rdfs:label "positive regulation of gamma-aminobutyric acid catabolic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + # Class: (regulation of muscle tissue development) AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GOC:yaf") Annotation( "PMID:23150719") "Any process that modulates the frequency, rate or extent of muscle tissue development.") @@ -34251,6 +40317,50 @@ AnnotationAssertion(rdfs:label "posi EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (dense core granule transport) + +AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GOC:kmv") Annotation( "PMID:23358451") "The directed movement a dense core granule within a cell.") +AnnotationAssertion(rdfs:comment "goslim_synapse") +AnnotationAssertion(rdfs:label "dense core granule transport") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) + +# Class: (regulation of anterograde dense core granule transport) + +AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GOC:kmv") Annotation( "PMID:23358451") "Any process that modulates the frequency, rate or extent of anterograde dense core granule transport.") +AnnotationAssertion(rdfs:label "regulation of anterograde dense core granule transport") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (negative regulation of anterograde dense core granule transport) + +AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GOC:kmv") Annotation( "PMID:23358451") "Any process that stops, prevents or reduces the frequency, rate or extent of anterograde dense core granule transport.") +AnnotationAssertion(rdfs:label "negative regulation of anterograde dense core granule transport") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (positive regulation of anterograde dense core granule transport) + +AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GOC:kmv") Annotation( "PMID:23358451") "Any process that activates or increases the frequency, rate or extent of anterograde dense core granule transport.") +AnnotationAssertion(rdfs:label "positive regulation of anterograde dense core granule transport") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (regulation of retrograde dense core granule transport) + +AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GOC:kmv") Annotation( "PMID:23358451") "Any process that modulates the frequency, rate or extent of retrograde dense core granule transport.") +AnnotationAssertion(rdfs:label "regulation of retrograde dense core granule transport") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (negative regulation of retrograde dense core granule transport) + +AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GOC:kmv") Annotation( "PMID:23358451") "Any process that stops, prevents or reduces the frequency, rate or extent of retrograde dense core granule transport.") +AnnotationAssertion(rdfs:label "negative regulation of retrograde dense core granule transport") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (positive regulation of retrograde dense core granule transport) + +AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GOC:kmv") Annotation( "PMID:23358451") "Any process that activates or increases the frequency, rate or extent of retrograde dense core granule transport.") +AnnotationAssertion(rdfs:label "positive regulation of retrograde dense core granule transport") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + # Class: (regulation of cell proliferation involved in outflow tract morphogenesis) AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GOC:dph") Annotation( "GOC:mtg_heart") Annotation( "PMID:21419760") "Any process that modulates the frequency, rate or extent of cell proliferation involved in outflow tract morphogenesis.") @@ -34327,6 +40437,12 @@ AnnotationAssertion(Annotation( "positive regulation of hematopoietic stem cell differentiation") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +# Class: (response to L-glutamate) + +AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "PMID:23574009") "Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an L-glutamate stimulus.") +AnnotationAssertion(rdfs:label "response to L-glutamate") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + # Class: (regulation of leukocyte differentiation) AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GOC:add") "Any process that modulates the frequency, rate or extent of leukocyte differentiation.") @@ -34373,6 +40489,24 @@ AnnotationAssertion(rdfs:label "posi EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (regulation of keratinocyte apoptotic process) + +AnnotationAssertion(Annotation( "GOC:BHF") Annotation( "GOC:TermGenie") Annotation( "GOC:mtg_apoptosis") Annotation( "GOC:rl") Annotation( "PMID:18938133") "Any process that modulates the frequency, rate or extent of keratinocyte apoptotic process.") +AnnotationAssertion(rdfs:label "regulation of keratinocyte apoptotic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (negative regulation of keratinocyte apoptotic process) + +AnnotationAssertion(Annotation( "GOC:BHF") Annotation( "GOC:TermGenie") Annotation( "GOC:mtg_apoptosis") Annotation( "GOC:rl") Annotation( "PMID:18938133") "Any process that stops, prevents or reduces the frequency, rate or extent of keratinocyte apoptotic process.") +AnnotationAssertion(rdfs:label "negative regulation of keratinocyte apoptotic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (positive regulation of keratinocyte apoptotic process) + +AnnotationAssertion(Annotation( "GOC:BHF") Annotation( "GOC:TermGenie") Annotation( "GOC:mtg_apoptosis") Annotation( "GOC:rl") Annotation( "PMID:18938133") "Any process that activates or increases the frequency, rate or extent of keratinocyte apoptotic process.") +AnnotationAssertion(rdfs:label "positive regulation of keratinocyte apoptotic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + # Class: (erythrocyte apoptotic process) AnnotationAssertion(Annotation( "GOC:BHF") Annotation( "GOC:TermGenie") Annotation( "GOC:mtg_apoptosis") Annotation( "GOC:rl") Annotation( "PMID:14569084") "Any apoptotic process in an erythrocyte.") @@ -34460,6 +40594,13 @@ AnnotationAssertion(Annotation( "negative regulation of chromosome condensation") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +# Class: (melanocyte apoptotic process) + +AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GOC:ic") Annotation( "PMID:20530876") "Any apoptotic process in a melanocyte, the main structural component of the epidermis.") +AnnotationAssertion(rdfs:label "melanocyte apoptotic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) + # Class: (negative regulation of RNA catabolic process) AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GOC:bf") Annotation( "PMID:16640457") "Any process that stops, prevents or reduces the frequency, rate or extent of RNA catabolic process.") @@ -34504,12 +40645,6 @@ AnnotationAssertion(rdfs:label "hepa EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -# Class: (catalytic complex) - -AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GOC:bhm") Annotation( "PMID:8077207") "A protein complex which is capable of catalytic activity.") -AnnotationAssertion(rdfs:label "catalytic complex") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) - # Class: (transmembrane transporter complex) AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GOC:bhm") Annotation( "PMID:18024586") "A transmembrane protein complex which enables the transfer of a substance from one side of a membrane to the other.") @@ -34518,25 +40653,6 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (regulation of apoptotic DNA fragmentation) - -AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GOC:hjd") Annotation( "PMID:15572351") Annotation( "PMID:15723341") "Any process that modulates the frequency, rate or extent of apoptotic DNA fragmentation.") -AnnotationAssertion(rdfs:comment "DNA fragmentation in response to apoptotic signals is achieved through the activity of apoptotic nucleases (see GO:0006309 'apoptotic DNA fragmentation'). Gene products involved in compartmentalization of such nucleases and in activation or repression of their enzymatic activity should be annotated to the regulation term GO:1902510 'regulation of apoptotic DNA fragmentation' or to one of its children (see PMID:15723341).") -AnnotationAssertion(rdfs:label "regulation of apoptotic DNA fragmentation") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) - -# Class: (negative regulation of apoptotic DNA fragmentation) - -AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GOC:hjd") Annotation( "PMID:15572351") "Any process that stops, prevents or reduces the frequency, rate or extent of apoptotic DNA fragmentation.") -AnnotationAssertion(rdfs:label "negative regulation of apoptotic DNA fragmentation") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) - -# Class: (positive regulation of apoptotic DNA fragmentation) - -AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GOC:hjd") Annotation( "PMID:15572351") "Any process that activates or increases the frequency, rate or extent of apoptotic DNA fragmentation.") -AnnotationAssertion(rdfs:label "positive regulation of apoptotic DNA fragmentation") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) - # Class: (regulation of organelle transport along microtubule) AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GOC:dph") Annotation( "PMID:21147087") "Any process that modulates the frequency, rate or extent of organelle transport along microtubule.") @@ -34561,12 +40677,48 @@ AnnotationAssertion(Annotation( "positive regulation of intracellular signal transduction") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +# Class: (regulation of neutrophil activation) + +AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "PMID:17588661") "Any process that modulates the frequency, rate or extent of neutrophil activation.") +AnnotationAssertion(rdfs:label "regulation of neutrophil activation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (negative regulation of neutrophil activation) + +AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "PMID:17588661") "Any process that stops, prevents or reduces the frequency, rate or extent of neutrophil activation.") +AnnotationAssertion(rdfs:label "negative regulation of neutrophil activation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (positive regulation of neutrophil activation) + +AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "PMID:17588661") "Any process that activates or increases the frequency, rate or extent of neutrophil activation.") +AnnotationAssertion(rdfs:label "positive regulation of neutrophil activation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + # Class: (protein localization to nucleolus) AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "PMID:22809626") "A process in which a protein is transported to, or maintained in, a location within a nucleolus.") AnnotationAssertion(rdfs:label "protein localization to nucleolus") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +# Class: (regulation of neutrophil migration) + +AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GO_REF:0000058") Annotation( "PMID:1826836") "Any process that modulates the frequency, rate or extent of neutrophil migration.") +AnnotationAssertion(rdfs:label "regulation of neutrophil migration") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (negative regulation of neutrophil migration) + +AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GO_REF:0000058") Annotation( "PMID:1826836") "Any process that stops, prevents or reduces the frequency, rate or extent of neutrophil migration.") +AnnotationAssertion(rdfs:label "negative regulation of neutrophil migration") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (positive regulation of neutrophil migration) + +AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GO_REF:0000058") Annotation( "PMID:1826836") "Any process that activates or increases the frequency, rate or extent of neutrophil migration.") +AnnotationAssertion(rdfs:label "positive regulation of neutrophil migration") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + # Class: (negative regulation of RNA biosynthetic process) AnnotationAssertion(Annotation( "GO:jl") Annotation( "GOC:TermGenie") Annotation( "GO_REF:0000058") "Any process that stops, prevents or reduces the frequency, rate or extent of RNA biosynthetic process.") @@ -34579,6 +40731,13 @@ AnnotationAssertion(Annotation( "positive regulation of RNA biosynthetic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +# Class: (respiratory basal cell differentiation) + +AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GO_REF:0000086") Annotation( "MP:0011114") Annotation( "PMID:17909629") "The process in which a relatively unspecialized cell acquires the specialized features of a respiratory basal cell.") +AnnotationAssertion(rdfs:comment "Changes in the lineage choice of ABCs or their undifferentiated daughters might contribute to the mucous cell hyperplasia, metaplasia or squamous metaplasia seen in many respiratory disorders") +AnnotationAssertion(rdfs:label "respiratory basal cell differentiation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + # Class: (regulation of neuroblast proliferation) AnnotationAssertion(Annotation( "GOC:PARL") Annotation( "GOC:TermGenie") Annotation( "GOC:rl") Annotation( "GO_REF:0000058") Annotation( "PMID:21168496") "Any process that modulates the frequency, rate or extent of neuroblast proliferation.") @@ -34740,6 +40899,27 @@ AnnotationAssertion(rdfs:comment "HS AnnotationAssertion(rdfs:label "positive regulation of supramolecular fiber organization") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +# Class: (regulation of melanosome transport) + +AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GOC:als") Annotation( "GO_REF:0000058") Annotation( "PMID:23334344") "Any process that modulates the frequency, rate or extent of melanosome transport.") +AnnotationAssertion(rdfs:label "regulation of melanosome transport") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (negative regulation of melanosome transport) + +AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GOC:als") Annotation( "GO_REF:0000058") Annotation( "PMID:23334344") "Any process that stops, prevents or reduces the frequency, rate or extent of melanosome transport.") +AnnotationAssertion(rdfs:label "negative regulation of melanosome transport") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (positive regulation of melanosome transport) + +AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GOC:als") Annotation( "GO_REF:0000058") Annotation( "PMID:23334344") "Any process that activates or increases the frequency, rate or extent of melanosome transport.") +AnnotationAssertion(rdfs:label "positive regulation of melanosome transport") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (positive regulation of neuroepithelial cell differentiation) AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GOC:mr") Annotation( "GO_REF:0000058") Annotation( "PMID:16916506") "Any process that activates or increases the frequency, rate or extent of neuroepithelial cell differentiation.") @@ -34870,6 +41050,27 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ) +# Class: (regulation of melanosome organization) + +AnnotationAssertion(Annotation( "GOC:BHF") Annotation( "GOC:TermGenie") Annotation( "GOC:rl") Annotation( "GO_REF:0000058") Annotation( "PMID:24769727") "Any process that modulates the frequency, rate or extent of melanosome organization.") +AnnotationAssertion(rdfs:comment "Lack of the transcription factor Zeb2 Q9R0G7 leads to spherical melanosomes with irregular borders, in contrast to the rod-shaped melanosomes of ZEB2MCWT hair follicles") +AnnotationAssertion(rdfs:label "regulation of melanosome organization") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (negative regulation of melanosome organization) + +AnnotationAssertion(Annotation( "GOC:BHF") Annotation( "GOC:TermGenie") Annotation( "GOC:rl") Annotation( "GO_REF:0000058") Annotation( "PMID:24769727") "Any process that stops, prevents or reduces the frequency, rate or extent of melanosome organization.") +AnnotationAssertion(rdfs:comment "Lack of the transcription factor Zeb2 Q9R0G7 leads to spherical melanosomes with irregular borders, in contrast to the rod-shaped melanosomes of ZEB2MCWT hair follicles.") +AnnotationAssertion(rdfs:label "negative regulation of melanosome organization") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (positive regulation of melanosome organization) + +AnnotationAssertion(Annotation( "GOC:BHF") Annotation( "GOC:TermGenie") Annotation( "GOC:rl") Annotation( "GO_REF:0000058") Annotation( "PMID:24769727") "Any process that activates or increases the frequency, rate or extent of melanosome organization.") +AnnotationAssertion(rdfs:comment "Lack of the transcription factor Zeb2 Q9R0G7 leads to spherical melanosomes with irregular borders, in contrast to the rod-shaped melanosomes of ZEB2MCWT hair follicles.") +AnnotationAssertion(rdfs:label "positive regulation of melanosome organization") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + # Class: (regulation of protein localization to plasma membrane) AnnotationAssertion(Annotation( "GOC:BHF") Annotation( "GOC:TermGenie") Annotation( "GOC:rl") Annotation( "GO_REF:0000058") Annotation( "PMID:11602640") "Any process that modulates the frequency, rate or extent of protein localization to plasma membrane.") @@ -34936,6 +41137,12 @@ AnnotationAssertion(Annotation( "positive regulation of endodermal cell differentiation") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +# Class: (melanosome assembly) + +AnnotationAssertion(Annotation( "GOC:PARL") Annotation( "GOC:TermGenie") Annotation( "GOC:bf") Annotation( "GO_REF:0000079") Annotation( "PMID:22511774") "The aggregation, arrangement and bonding together of a set of components to form a melanosome, a tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored.") +AnnotationAssertion(rdfs:label "melanosome assembly") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + # Class: (multi-ciliated epithelial cell differentiation) AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GOC:sp") Annotation( "GO_REF:0000086") Annotation( "PMID:22231168") Annotation( "PMID:24934224") "The process in which a relatively unspecialized cell acquires the specialized features of a multi-ciliated epithelial cell.") @@ -34948,6 +41155,30 @@ AnnotationAssertion(Annotation( "protein localization to Golgi membrane") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +# Class: (regulation of glutamate secretion, neurotransmission) + +AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GO_REF:0000058") Annotation( "PMID:16782817") "Any process that modulates the frequency, rate or extent of glutamate secretion, neurotransmission.") +AnnotationAssertion(rdfs:comment "An example of this is Rab3gap1 in mouse (Q80UJ7) in PMID:16782817 inferred from mutant phenotype") +AnnotationAssertion(rdfs:label "regulation of glutamate secretion, neurotransmission") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (negative regulation of glutamate secretion, neurotransmission) + +AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GO_REF:0000058") Annotation( "PMID:16782817") "Any process that stops, prevents or reduces the frequency, rate or extent of glutamate secretion, neurotransmission.") +AnnotationAssertion(rdfs:comment "An example of this is Rab3gap1 in mouse (Q80UJ7) in PMID:16782817 inferred from mutant phenotype") +AnnotationAssertion(rdfs:label "negative regulation of glutamate secretion, neurotransmission") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (positive regulation of glutamate secretion, neurotransmission) + +AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GO_REF:0000058") Annotation( "PMID:16782817") "Any process that activates or increases the frequency, rate or extent of glutamate secretion, where glutamate acts as a neurotransmitter.") +AnnotationAssertion(rdfs:comment "An example of this is Rab3gap1 in mouse (Q80UJ7) in PMID:16782817 inferred from mutant phenotype") +AnnotationAssertion(rdfs:label "positive regulation of glutamate secretion, neurotransmission") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (regulation of vacuolar transport) AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GOC:vw") Annotation( "GO_REF:0000058") "Any process that modulates the frequency, rate or extent of vacuolar transport.") @@ -34978,6 +41209,12 @@ AnnotationAssertion(Annotation( "regulation of Golgi organization") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +# Class: (facioacoustic ganglion development) + +AnnotationAssertion(Annotation( "GOC:PARL") Annotation( "GOC:TermGenie") Annotation( "GOC:bf") Annotation( "GOC:mat") Annotation( "GO_REF:0000094") Annotation( "PMID:18356247") "The process whose specific outcome is the progression of an acoustico-facial VII-VIII ganglion complex over time, from its formation to the mature structure.") +AnnotationAssertion(rdfs:label "facioacoustic ganglion development") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + # Class: (regulation of mitotic chromosome condensation) AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GO_REF:0000058") Annotation( "PMID:9490640") "Any process that modulates the frequency, rate or extent of mitotic chromosome condensation.") @@ -35140,7 +41377,6 @@ EquivalentClasses( ObjectIntersection AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GOC:pm") Annotation( "GO_REF:0000064") Annotation( "PMID:24769233") "Any vesicle that is part of the extracellular region.") AnnotationAssertion(rdfs:label "extracellular vesicle") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) # Class: (regulation of protein localization to cilium) @@ -35178,24 +41414,6 @@ AnnotationAssertion(Annotation( "positive regulation of protein localization to ciliary membrane") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -# Class: (regulation of DNA catabolic process) - -AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GO_REF:0000058") Annotation( "PMID:2001740") "Any process that modulates the frequency, rate or extent of DNA catabolic process.") -AnnotationAssertion(rdfs:label "regulation of DNA catabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) - -# Class: (negative regulation of DNA catabolic process) - -AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GO_REF:0000058") Annotation( "PMID:2001740") "Any process that stops, prevents or reduces the frequency, rate or extent of DNA catabolic process.") -AnnotationAssertion(rdfs:label "negative regulation of DNA catabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) - -# Class: (positive regulation of DNA catabolic process) - -AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GO_REF:0000058") Annotation( "PMID:2001740") "Any process that activates or increases the frequency, rate or extent of DNA catabolic process.") -AnnotationAssertion(rdfs:label "positive regulation of DNA catabolic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) - # Class: (negative regulation of microvillus assembly) AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GOC:als") Annotation( "GO_REF:0000058") Annotation( "PMID:22797597") "Any process that stops, prevents or reduces the frequency, rate or extent of microvillus assembly.") @@ -35281,6 +41499,12 @@ AnnotationAssertion(Annotation( "positive regulation of cardiac conduction") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +# Class: (regulation of amino acid transmembrane transport) + +AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GO_REF:0000058") Annotation( "PMID:16115814") "Any process that modulates the frequency, rate or extent of amino acid transmembrane transport.") +AnnotationAssertion(rdfs:label "regulation of amino acid transmembrane transport") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + # Class: (organic acid transmembrane transport) AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GO_REF:0000069") "The process in which an organic acid is transported across a membrane.") @@ -35440,9 +41664,18 @@ AnnotationAssertion(Annotation( "epithelial cell apoptotic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) +SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) +SubClassOf( ObjectComplementOf(ObjectSomeValuesFrom( ))) +SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) +SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) +SubClassOf( ObjectSomeValuesFrom( ObjectComplementOf())) +DisjointClasses( ObjectSomeValuesFrom( )) +DisjointClasses( ObjectSomeValuesFrom( )) DisjointClasses( ObjectSomeValuesFrom( )) +DisjointClasses( ObjectSomeValuesFrom( )) # Class: (regulation of collagen fibril organization) @@ -35539,6 +41772,31 @@ AnnotationAssertion(Annotation( "protein localization to microvillus") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +# Class: (axon cytoplasm) + +AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GO_REF:0000064") Annotation( "PMID:18667152") "Any cytoplasm that is part of a axon.") +AnnotationAssertion(rdfs:label "axon cytoplasm") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (regulation of otic vesicle morphogenesis) + +AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GO_REF:0000058") Annotation( "PMID:25677106") "Any process that modulates the frequency, rate or extent of otic vesicle morphogenesis.") +AnnotationAssertion(rdfs:label "regulation of otic vesicle morphogenesis") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (negative regulation of otic vesicle morphogenesis) + +AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GO_REF:0000058") Annotation( "PMID:25677106") "Any process that stops, prevents or reduces the frequency, rate or extent of otic vesicle morphogenesis.") +AnnotationAssertion(rdfs:label "negative regulation of otic vesicle morphogenesis") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (positive regulation of otic vesicle morphogenesis) + +AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GO_REF:0000058") Annotation( "PMID:25677106") "Any process that activates or increases the frequency, rate or extent of otic vesicle morphogenesis.") +AnnotationAssertion(rdfs:label "positive regulation of otic vesicle morphogenesis") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + # Class: (negative regulation of meiotic cell cycle process involved in oocyte maturation) AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GO_REF:0000058") Annotation( "PMID:22674394") "Any process that stops, prevents or reduces the frequency, rate or extent of meiotic cell cycle process involved in oocyte maturation.") @@ -35640,14 +41898,14 @@ AnnotationAssertion(Annotation( "regulation of bile acid metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) +SubClassOf( ) # Class: (negative regulation of bile acid metabolic process) AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GOC:bf") Annotation( "GO_REF:0000058") "Any process that stops, prevents or reduces the frequency, rate or extent of bile acid metabolic process.") AnnotationAssertion(rdfs:label "negative regulation of bile acid metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ) SubClassOf( ) @@ -35656,10 +41914,28 @@ SubClassOf( "GOC:TermGenie") Annotation( "GOC:bf") Annotation( "GO_REF:0000058") "Any process that activates or increases the frequency, rate or extent of bile acid metabolic process.") AnnotationAssertion(rdfs:label "positive regulation of bile acid metabolic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ) SubClassOf( ) +# Class: (regulation of Schwann cell chemotaxis) + +AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GO_REF:0000058") Annotation( "PMID:16203995") "Any process that modulates the frequency, rate or extent of Schwann cell chemotaxis.") +AnnotationAssertion(rdfs:label "regulation of Schwann cell chemotaxis") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (negative regulation of Schwann cell chemotaxis) + +AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GO_REF:0000058") Annotation( "PMID:16203995") "Any process that stops, prevents or reduces the frequency, rate or extent of Schwann cell chemotaxis.") +AnnotationAssertion(rdfs:label "negative regulation of Schwann cell chemotaxis") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (positive regulation of Schwann cell chemotaxis) + +AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GO_REF:0000058") Annotation( "PMID:16203995") "Any process that activates or increases the frequency, rate or extent of Schwann cell chemotaxis.") +AnnotationAssertion(rdfs:label "positive regulation of Schwann cell chemotaxis") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + # Class: (cell leading edge cell cortex) AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GOC:kmv") Annotation( "GO_REF:0000064") Annotation( "PMID:25843030") "The cell cortex of the leading edge of a cell.") @@ -35920,10 +42196,10 @@ AnnotationAssertion(rdfs:label "posi EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (glucose transmembrane transport) +# Class: (D-glucose transmembrane transport) -AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GO_REF:0000069") Annotation( "PMID:9090050") "The process in which glucose is transported across a membrane.") -AnnotationAssertion(rdfs:label "glucose transmembrane transport") +AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GO_REF:0000069") Annotation( "PMID:9090050") "The process in which D-glucose is transported across a membrane.") +AnnotationAssertion(rdfs:label "D-glucose transmembrane transport") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) # Class: (regulation of somatic stem cell division) @@ -35951,6 +42227,25 @@ AnnotationAssertion(Annotation(rdfs:label "Glutathione is taken up by the bacter AnnotationAssertion(rdfs:label "peptide transmembrane transporter activity") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +# Class: (regulation of cytoplasmic translational initiation) + +AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GO_REF:0000058") Annotation( "PMID:12242291") "Any process that modulates the frequency, rate or extent of cytoplasmic translational initiation.") +AnnotationAssertion(rdfs:label "regulation of cytoplasmic translational initiation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (negative regulation of cytoplasmic translational initiation) + +AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GO_REF:0000058") Annotation( "PMID:12242291") "Any process that stops, prevents or reduces the frequency, rate or extent of cytoplasmic translational initiation.") +AnnotationAssertion(rdfs:label "negative regulation of cytoplasmic translational initiation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (positive regulation of cytoplasmic translational initiation) + +AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GO_REF:0000058") Annotation( "PMID:12242291") "Any process that activates or increases the frequency, rate or extent of cytoplasmic translational initiation.") +AnnotationAssertion(rdfs:label "positive regulation of cytoplasmic translational initiation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + # Class: (negative regulation of type B pancreatic cell proliferation) AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GO_REF:0000058") Annotation( "PMID:24055447") "Any process that stops, prevents or reduces the frequency, rate or extent of type B pancreatic cell proliferation.") @@ -36100,6 +42395,27 @@ AnnotationAssertion(rdfs:comment "An AnnotationAssertion(rdfs:label "positive regulation of protein localization to cell cortex") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +# Class: (regulation of dense core granule transport) + +AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GO_REF:0000058") Annotation( "PMID:22699897") "Any process that modulates the frequency, rate or extent of dense core granule transport.") +AnnotationAssertion(rdfs:comment "cdk-5 in C.elegans (G5ECH7) in PMID:22699897 (inferred from mutant phenotype).") +AnnotationAssertion(rdfs:label "regulation of dense core granule transport") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (negative regulation of dense core granule transport) + +AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GO_REF:0000058") Annotation( "PMID:22699897") "Any process that stops, prevents or reduces the frequency, rate or extent of dense core granule transport.") +AnnotationAssertion(rdfs:comment "cdk-5 in C.elegans (G5ECH7) in PMID:22699897 (inferred from mutant phenotype).") +AnnotationAssertion(rdfs:label "negative regulation of dense core granule transport") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (positive regulation of dense core granule transport) + +AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GO_REF:0000058") Annotation( "PMID:22699897") "Any process that activates or increases the frequency, rate or extent of dense core granule transport.") +AnnotationAssertion(rdfs:comment "cdk-5 in C.elegans (G5ECH7) in PMID:22699897 (inferred from mutant phenotype).") +AnnotationAssertion(rdfs:label "positive regulation of dense core granule transport") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + # Class: (serous membrane development) AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GOC:dph") Annotation( "GO_REF:0000094") Annotation( "PMID:15840053") "The process whose specific outcome is the progression of a serous membrane over time, from its formation to the mature structure.") @@ -36144,6 +42460,13 @@ AnnotationAssertion(Annotation( "positive regulation of aortic smooth muscle cell differentiation") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +# Class: (facioacoustic ganglion morphogenesis) + +AnnotationAssertion(Annotation( "GOC:PARL") Annotation( "GOC:TermGenie") Annotation( "GOC:bf") Annotation( "GOC:mat") Annotation( "GO_REF:0000083") Annotation( "PMID:18356247") "The developmental process by which an acoustico-facial VII-VIII ganglion complex is generated and organized.") +AnnotationAssertion(rdfs:label "facioacoustic ganglion morphogenesis") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (cranial skeletal system development) AnnotationAssertion(Annotation( "GOC:PARL") Annotation( "GOC:TermGenie") Annotation( "GOC:bf") Annotation( "GO_REF:0000094") Annotation( "PMID:11262227") "The process whose specific outcome is the progression of a cranial skeletal system over time, from its formation to the mature structure. The cranial skeletal system is the skeletal subdivision of the head, and includes the skull (cranium plus mandible), pharyngeal and/or hyoid apparatus.") @@ -36233,12 +42556,24 @@ AnnotationAssertion(Annotation( "positive regulation of endothelial cell activation") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +# Class: (regulation of membrane lipid metabolic process) + +AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GO_REF:0000058") Annotation( "PMID:25954280") "Any process that modulates the frequency, rate or extent of membrane lipid metabolic process.") +AnnotationAssertion(rdfs:label "regulation of membrane lipid metabolic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + # Class: (carboxylic acid transmembrane transport) AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GO_REF:0000069") Annotation( "PMID:10869563") "The process in which carboxylic acid is transported across a membrane.") AnnotationAssertion(rdfs:label "carboxylic acid transmembrane transport") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +# Class: (otic placode development) + +AnnotationAssertion(Annotation( "GOC:PARL") Annotation( "GOC:TermGenie") Annotation( "GOC:bf") Annotation( "GOC:mat") Annotation( "GO_REF:0000094") Annotation( "PMID:18356247") "The process whose specific outcome is the progression of an otic placode over time, from its formation to the mature structure.") +AnnotationAssertion(rdfs:label "otic placode development") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + # Class: (regulation of vascular associated smooth muscle cell differentiation) AnnotationAssertion(Annotation( "GOC:BHF") Annotation( "GOC:BHF_miRNA") Annotation( "GOC:TermGenie") Annotation( "GOC:rph") Annotation( "GO_REF:0000058") Annotation( "PMID:19088079") "Any process that modulates the frequency, rate or extent of vascular smooth muscle cell differentiation.") @@ -36257,6 +42592,27 @@ AnnotationAssertion(Annotation( "positive regulation of vascular associated smooth muscle cell differentiation") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +# Class: (regulation of cerebellar neuron development) + +AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GO_REF:0000058") Annotation( "PMID:26609159") "Any process that modulates the frequency, rate or extent of cerebellar neuron development.") +AnnotationAssertion(rdfs:label "regulation of cerebellar neuron development") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (negative regulation of cerebellar neuron development) + +AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GO_REF:0000058") Annotation( "PMID:26609159") "Any process that stops, prevents or reduces the frequency, rate or extent of cerebellar neuron development.") +AnnotationAssertion(rdfs:label "negative regulation of cerebellar neuron development") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (positive regulation of cerebellar neuron development) + +AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GO_REF:0000058") Annotation( "PMID:26609159") "Any process that activates or increases the frequency, rate or extent of cerebellar neuron development.") +AnnotationAssertion(rdfs:label "positive regulation of cerebellar neuron development") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (regulation of axo-dendritic protein transport) AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GO_REF:0000058") Annotation( "PMID:20694152") "Any process that modulates the frequency, rate or extent of axo-dendritic protein transport.") @@ -36396,6 +42752,12 @@ AnnotationAssertion(Annotation( "epicardium morphogenesis") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +# Class: (cellular response to L-glutamate) + +AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GO_REF:0000071") Annotation( "PMID:25962137") "Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a L-glutamate(1-) stimulus.") +AnnotationAssertion(rdfs:label "cellular response to L-glutamate") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + # Class: (negative regulation of chromatin organization) AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GOC:pr") Annotation( "GOC:vw") Annotation( "GO_REF:0000058") Annotation( "PMID:654321") "Any process that stops, prevents or reduces the frequency, rate or extent of chromatin organization.") @@ -36970,6 +43332,27 @@ AnnotationAssertion(Annotation( "positive regulation of mesodermal cell differentiation") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +# Class: (regulation of detection of mechanical stimulus involved in sensory perception of touch) + +AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GO_REF:0000058") Annotation( "PMID:8692859") "Any process that modulates the frequency, rate or extent of detection of mechanical stimulus involved in sensory perception of touch.") +AnnotationAssertion(rdfs:label "regulation of detection of mechanical stimulus involved in sensory perception of touch") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (negative regulation of detection of mechanical stimulus involved in sensory perception of touch) + +AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GO_REF:0000058") Annotation( "PMID:8692859") "Any process that stops, prevents or reduces the frequency, rate or extent of detection of mechanical stimulus involved in sensory perception of touch.") +AnnotationAssertion(rdfs:label "negative regulation of detection of mechanical stimulus involved in sensory perception of touch") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (positive regulation of detection of mechanical stimulus involved in sensory perception of touch) + +AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GO_REF:0000058") Annotation( "PMID:8692859") "Any process that activates or increases the frequency, rate or extent of detection of mechanical stimulus involved in sensory perception of touch.") +AnnotationAssertion(rdfs:label "positive regulation of detection of mechanical stimulus involved in sensory perception of touch") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (regulation of synapse pruning) AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GO_REF:0000058") Annotation( "PMID:27779093") "Any process that modulates the frequency, rate or extent of synapse pruning.") @@ -37157,6 +43540,12 @@ AnnotationAssertion(rdfs:label "posi EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (glutamatergic neuron differentiation) + +AnnotationAssertion(Annotation( "GOC:TermGenie") Annotation( "GO_REF:0000086") Annotation( "PMID:24030726") "The process in which a relatively unspecialized cell acquires the specialized features of a glutamatergic neuron.") +AnnotationAssertion(rdfs:label "glutamatergic neuron differentiation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + # Class: (retinal cell apoptotic process) AnnotationAssertion(Annotation( "GOC:mtg_apoptosis") Annotation( "PMID:15558487") Annotation( "PMID:24664675") "Any apoptotic process in a retinal cell.") @@ -37171,6 +43560,19 @@ AnnotationAssertion(rdfs:label "comp EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +# Class: (anterograde neuronal dense core vesicle transport) + +AnnotationAssertion(Annotation( "GOC:kmv") Annotation( "PMID:23358451") "The directed movement of substances in neuronal dense core vesicles along axonal microtubules towards the presynapse.") +AnnotationAssertion(rdfs:label "anterograde neuronal dense core vesicle transport") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) + +# Class: (retrograde neuronal dense core vesicle transport) + +AnnotationAssertion(Annotation( "GOC:kmv") Annotation( "PMID:23358451") Annotation( "PMID:24762653") "The directed movement of neuronal dense core vesicles along axonal microtubules towards the cell body.") +AnnotationAssertion(rdfs:label "retrograde neuronal dense core vesicle transport") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) + # Class: (exosomal secretion) AnnotationAssertion(Annotation( "GOC:hjd") Annotation( "PMID:10572093") Annotation( "PMID:12154376") Annotation( "PMID:16773132") Annotation( "PMID:18617898") "The process whereby a membrane-bounded vesicle is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane.") @@ -37182,6 +43584,13 @@ SubClassOf( ObjectSomeValuesFrom( ObjectSomeValuesFrom( ObjectComplementOf())) DisjointClasses( ObjectSomeValuesFrom( )) +# Class: (neutrophil migration) + +AnnotationAssertion(Annotation( "PMID:1826836") "The movement of a neutrophil within or between different tissues and organs of the body.") +AnnotationAssertion(rdfs:label "neutrophil migration") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) + # Class: (RNA localization to chromatin) AnnotationAssertion(Annotation( "GOC:dos") Annotation( "GOC:mah") Annotation( "PMID:22582262") "A process in which RNA is transported to and maintained in a part of a chromosome that is organized into chromatin.") @@ -37203,6 +43612,14 @@ AnnotationAssertion(rdfs:label "dens EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) +# Class: (regulation of cytoplasmic translational termination) + +AnnotationAssertion(Annotation( "PMID:11570975") "Any process that modulates the frequency, rate or extent of cytoplasmic translational termination.") +AnnotationAssertion(rdfs:label "regulation of cytoplasmic translational termination") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (cholangiocyte proliferation) AnnotationAssertion(Annotation( "PMID:24434010") "The multiplication or reproduction of cholangiocytes, resulting in the expansion of the cholangiocyte population. A cholangiocyte is an epithelial cell that is part of the bile duct. Cholangiocytes contribute to bile secretion via net release of bicarbonate and water.") @@ -37218,6 +43635,14 @@ EquivalentClasses( ObjectIntersection SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (Schwann cell chemotaxis) + +AnnotationAssertion(Annotation( "PMID:16203995") "The directed movement of a Schwann cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis).") +AnnotationAssertion(rdfs:label "Schwann cell chemotaxis") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) + # Class: (colon smooth muscle contraction) AnnotationAssertion(Annotation( "PMID:24170253") "A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry of the large intestine, exclusive of the rectum. The colon is that part of the large intestine that connects the small intestine to the rectum.") @@ -37513,6 +43938,27 @@ SubClassOf( ) SubClassOf( ) +# Class: (regulation of glutamate metabolic process) + +AnnotationAssertion(Annotation( "GOC:sl") "Any process that modulates the frequency, rate or extent of glutamate metabolic process.") +AnnotationAssertion(rdfs:label "regulation of glutamate metabolic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) + +# Class: (negative regulation of glutamate metabolic process) + +AnnotationAssertion(Annotation( "GOC:sl") "Any process that stops, prevents, or reduces the frequency, rate or extent of glutamate metabolic process.") +AnnotationAssertion(rdfs:label "negative regulation of glutamate metabolic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) + +# Class: (positive regulation of glutamate metabolic process) + +AnnotationAssertion(Annotation( "GOC:sl") "Any process that activates or increases the frequency, rate or extent of glutamate metabolic process.") +AnnotationAssertion(rdfs:label "positive regulation of glutamate metabolic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) + # Class: (regulation of pancreatic A cell differentiation) AnnotationAssertion(Annotation( "GOC:mah") "Any process that modulates the frequency, rate or extent of pancreatic A cell differentiation.") @@ -37582,17 +44028,23 @@ AnnotationAssertion(Annotation( "positive regulation of fibroblast apoptotic process") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -# Class: (regulation of DNA biosynthetic process) +# Class: (regulation of amino acid biosynthetic process) + +AnnotationAssertion(Annotation( "GOC:obol") "Any process that modulates the frequency, rate or extent of cellular amino acid biosynthetic process.") +AnnotationAssertion(rdfs:label "regulation of amino acid biosynthetic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -AnnotationAssertion(Annotation( "GOC:obol") "Any process that modulates the frequency, rate or extent of DNA biosynthetic process.") -AnnotationAssertion(rdfs:label "regulation of DNA biosynthetic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +# Class: (negative regulation of amino acid biosynthetic process) -# Class: (negative regulation of DNA biosynthetic process) +AnnotationAssertion(Annotation( "GOC:obol") "Any process that stops, prevents or reduces the frequency, rate or extent of an amino acid biosynthetic process.") +AnnotationAssertion(rdfs:label "negative regulation of amino acid biosynthetic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -AnnotationAssertion(Annotation( "GOC:obol") "Any process that stops, prevents or reduces the frequency, rate or extent of DNA biosynthetic process.") -AnnotationAssertion(rdfs:label "negative regulation of DNA biosynthetic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +# Class: (positive regulation of amino acid biosynthetic process) + +AnnotationAssertion(Annotation( "GOC:obol") "Any process that activates or increases the frequency, rate or extent of cellular amino acid biosynthetic process.") +AnnotationAssertion(rdfs:label "positive regulation of amino acid biosynthetic process") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) # Class: (positive regulation of myotome development) @@ -37867,12 +44319,6 @@ AnnotationAssertion(Annotation( "positive regulation of dendritic cell dendrite assembly") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -# Class: (positive regulation of DNA biosynthetic process) - -AnnotationAssertion(Annotation( "GOC:obol") "Any process that activates or increases the frequency, rate or extent of DNA biosynthetic process.") -AnnotationAssertion(rdfs:label "positive regulation of DNA biosynthetic process") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) - # Class: (negative regulation of stem cell proliferation) AnnotationAssertion(Annotation( "GOC:dph") "Any process that stops, prevents or reduces the frequency, rate or extent of stem cell proliferation.") @@ -37993,6 +44439,24 @@ AnnotationAssertion(Annotation( "positive regulation of stem cell differentiation") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +# Class: (regulation of cytoplasmic translation) + +AnnotationAssertion(Annotation( "GOC:obol") "Any process that modulates the frequency, rate or extent of cytoplasmic translation.") +AnnotationAssertion(rdfs:label "regulation of cytoplasmic translation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (negative regulation of cytoplasmic translation) + +AnnotationAssertion(Annotation( "GOC:obol") "Any process that stops, prevents or reduces the frequency, rate or extent of cytoplasmic translation.") +AnnotationAssertion(rdfs:label "negative regulation of cytoplasmic translation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (positive regulation of cytoplasmic translation) + +AnnotationAssertion(Annotation( "GOC:obol") "Any process that activates or increases the frequency, rate or extent of cytoplasmic translation.") +AnnotationAssertion(rdfs:label "positive regulation of cytoplasmic translation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + # Class: (regulation of mesenchymal cell proliferation involved in lung development) AnnotationAssertion(Annotation( "PMID:21513708") "Any process that modulates the frequency, rate or extent of mesenchymal cell proliferation involved in lung development.") @@ -38086,6 +44550,24 @@ AnnotationAssertion(Annotation( "positive regulation of androgen secretion") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +# Class: (regulation of forebrain neuron differentiation) + +AnnotationAssertion(Annotation( "GOC:obol") "Any process that modulates the frequency, rate or extent of forebrain neuron differentiation.") +AnnotationAssertion(rdfs:label "regulation of forebrain neuron differentiation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (negative regulation of forebrain neuron differentiation) + +AnnotationAssertion(Annotation( "GOC:obol") "Any process that stops, prevents or reduces the frequency, rate or extent of forebrain neuron differentiation.") +AnnotationAssertion(rdfs:label "negative regulation of forebrain neuron differentiation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (positive regulation of forebrain neuron differentiation) + +AnnotationAssertion(Annotation( "GOC:obol") "Any process that activates or increases the frequency, rate or extent of forebrain neuron differentiation.") +AnnotationAssertion(rdfs:label "positive regulation of forebrain neuron differentiation") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + # Class: (mesenchymal cell differentiation involved in renal system development) AnnotationAssertion(Annotation( "GOC:mtg_kidney_jan10") Annotation( "GOC:obol") Annotation( "GOC:yaf") "The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the mesenchymal cells of the renal system as it progresses from its formation to the mature state.") @@ -38110,6 +44592,24 @@ AnnotationAssertion(Annotation( "positive regulation of skeletal muscle cell differentiation") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +# Class: (regulation of retrograde axon cargo transport) + +AnnotationAssertion(Annotation( "GOC:obol") "Any process that modulates the frequency, rate or extent of retrograde axon cargo transport.") +AnnotationAssertion(rdfs:label "regulation of retrograde axon cargo transport") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (negative regulation of retrograde axon cargo transport) + +AnnotationAssertion(Annotation( "GOC:obol") "Any process that stops, prevents or reduces the frequency, rate or extent of retrograde axon cargo transport.") +AnnotationAssertion(rdfs:label "negative regulation of retrograde axon cargo transport") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + +# Class: (positive regulation of retrograde axon cargo transport) + +AnnotationAssertion(Annotation( "GOC:obol") "Any process that activates or increases the frequency, rate or extent of retrograde axon cargo transport.") +AnnotationAssertion(rdfs:label "positive regulation of retrograde axon cargo transport") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) + # Class: (regulation of endothelial cell chemotaxis) AnnotationAssertion(Annotation( "GOC:BHF") "Any process that modulates the frequency, rate or extent of endothelial cell chemotaxis.") @@ -38283,6 +44783,12 @@ AnnotationAssertion( "Euteleostomi") SubClassOf( ) +# Class: (Chromadorea) + +AnnotationAssertion( "GC_ID:1") +AnnotationAssertion(rdfs:label "Chromadorea") +SubClassOf( ) + # Class: (Ecdysozoa) AnnotationAssertion( "GC_ID:1") @@ -38352,6 +44858,7 @@ SubClassOf( (Saccharomycotina) AnnotationAssertion( "GC_ID:1") +AnnotationAssertion( "PMID:38895705") AnnotationAssertion(rdfs:label "Saccharomycotina") SubClassOf( ) @@ -38403,7 +44910,6 @@ AnnotationAssertion( "PMID:11542087") AnnotationAssertion( "PMID:11760965") AnnotationAssertion( "PMID:12054223") -AnnotationAssertion( "PMID:2112744") AnnotationAssertion( "PMID:270744") AnnotationAssertion( "PMID:32628106") AnnotationAssertion( "PMID:36748408") @@ -38457,7 +44963,6 @@ AnnotationAssertion( "PMID:11542149") AnnotationAssertion( "PMID:11760965") AnnotationAssertion( "PMID:12054223") -AnnotationAssertion( "PMID:2112744") AnnotationAssertion( "PMID:25527841") AnnotationAssertion( "PMID:270744") AnnotationAssertion( "PMID:32628106") @@ -38469,6 +44974,18 @@ AnnotationAssertion( "Archaea") SubClassOf( ) +# Class: (Rhabditina) + +AnnotationAssertion( "GC_ID:1") +AnnotationAssertion(rdfs:label "Rhabditina") +SubClassOf( ) + +# Class: (Rhabditomorpha) + +AnnotationAssertion( "GC_ID:1") +AnnotationAssertion(rdfs:label "Rhabditomorpha") +SubClassOf( ) + # Class: (Evosea) AnnotationAssertion( "GC_ID:1") @@ -38744,12 +45261,14 @@ SubClassOf( (Saccharomycetes) AnnotationAssertion( "GC_ID:1") +AnnotationAssertion( "PMID:38895705") AnnotationAssertion(rdfs:label "Saccharomycetes") SubClassOf( ) # Class: (Saccharomycetales) AnnotationAssertion( "GC_ID:1") +AnnotationAssertion( "PMID:38895705") AnnotationAssertion(rdfs:label "Saccharomycetales") SubClassOf( ) @@ -38803,6 +45322,18 @@ AnnotationAssertion( "Amoebozoa") SubClassOf( ) +# Class: (Rhabditoidea) + +AnnotationAssertion( "GC_ID:1") +AnnotationAssertion(rdfs:label "Rhabditoidea") +SubClassOf( ) + +# Class: (Peloderinae) + +AnnotationAssertion( "GC_ID:1") +AnnotationAssertion(rdfs:label "Peloderinae") +SubClassOf( ) + # Class: (Dictyostelium) AnnotationAssertion( "GC_ID:1") @@ -38828,6 +45359,30 @@ AnnotationAssertion( "Eumetazoa") SubClassOf( ) +# Class: (Nematoda) + +AnnotationAssertion( "GC_ID:1") +AnnotationAssertion(rdfs:label "Nematoda") +SubClassOf( ) + +# Class: (Rhabditida) + +AnnotationAssertion( "GC_ID:1") +AnnotationAssertion(rdfs:label "Rhabditida") +SubClassOf( ) + +# Class: (Caenorhabditis) + +AnnotationAssertion( "GC_ID:1") +AnnotationAssertion(rdfs:label "Caenorhabditis") +SubClassOf( ) + +# Class: (Rhabditidae) + +AnnotationAssertion( "GC_ID:1") +AnnotationAssertion(rdfs:label "Rhabditidae") +SubClassOf( ) + # Class: (Arthropoda) AnnotationAssertion( "GC_ID:1") @@ -38988,10 +45543,66 @@ SubClassOf( (processual entity) AnnotationAssertion(Annotation( "span:ProcessualEntity") "An occurrent [span:Occurrent] that exists in time by occurring or happening, has temporal parts and always involves and depends on some entity.") +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "BFO:0000003") AnnotationAssertion(rdfs:label "processual entity") DisjointClasses( ) +# Class: (naris) + +AnnotationAssertion(Annotation( "http://orcid.org/0000-0001-9114-8737") "Orifice of the olfactory system. The naris is the route by which odorants enter the olfactory system[MAH].") +AnnotationAssertion( "AAO:0000311") +AnnotationAssertion( "EHDAA2:0001225") +AnnotationAssertion( "EHDAA:9083") +AnnotationAssertion( "EMAPA:17847") +AnnotationAssertion( "MA:0000282") +AnnotationAssertion( "SCTID:272650008") +AnnotationAssertion( "VHOG:0000663") +AnnotationAssertion( "galen:Naris") +AnnotationAssertion(rdfs:label "naris") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (nose) + +AnnotationAssertion(Annotation( "UBERON:cjm") "The olfactory organ of vertebrates, consisting of nares, olfactory epithelia and the structures and skeletal framework of the nasal cavity.") +AnnotationAssertion( "BTO:0000840") +AnnotationAssertion( "CALOHA:TS-2037") +AnnotationAssertion( "EHDAA2:0001274") +AnnotationAssertion( "EHDAA:1502") +AnnotationAssertion( "EMAPA:16542") +AnnotationAssertion( "EV:0100037") +AnnotationAssertion( "EV:0100370") +AnnotationAssertion( "FMA:46472") +AnnotationAssertion( "GAID:77") +AnnotationAssertion( "MA:0000281") +AnnotationAssertion( "MAT:0000139") +AnnotationAssertion( "MESH:D009666") +AnnotationAssertion( "MIAA:0000139") +AnnotationAssertion( "NCIT:C12756") +AnnotationAssertion( "SCTID:181195007") +AnnotationAssertion( "TAO:0000047") +AnnotationAssertion( "Wikipedia:Nose") +AnnotationAssertion( "ZFA:0000047") +AnnotationAssertion( "galen:Nose") +AnnotationAssertion(rdfs:label "nose") +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (chemosensory organ) AnnotationAssertion(rdfs:label "chemosensory organ") @@ -39004,6 +45615,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (islet of Langerhans) AnnotationAssertion(Annotation( "MA:0000127") Annotation( "MESH:A03.734.414") Annotation( "MP:0005215") "The clusters of hormone-producing cells that are scattered throughout the pancreas.") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0010406") AnnotationAssertion( "BTO:0000991") AnnotationAssertion( "CALOHA:TS-0741") @@ -39041,12 +45653,13 @@ AnnotationAssertion( "submucosa") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (peripheral nervous system) AnnotationAssertion(Annotation( "GO:0007422") "A major division of the nervous system that contains nerves which connect the central nervous system (CNS) with sensory organs, other organs, muscles, blood vessels and glands.") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0000429") AnnotationAssertion( "BAMS:PNS") AnnotationAssertion( "BILA:0000081") @@ -39076,6 +45689,51 @@ AnnotationAssertion(rdfs:label " SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (parasympathetic nervous system) + +AnnotationAssertion(Annotation( "GO:0048486") "The parasympathetic nervous system is one of the two divisions of the vertebrate autonomic nervous system. Parasympathetic nerves emerge cranially as pre ganglionic fibers from oculomotor, facial, glossopharyngeal and vagus and from the sacral region of the spinal cord. Most neurons are cholinergic and responses are mediated by muscarinic receptors. The parasympathetic system innervates, for example: salivary glands, thoracic and abdominal viscera, bladder and genitalia[GO].") +AnnotationAssertion( "AAO:0010488") +AnnotationAssertion( "BIRNLEX:2517") +AnnotationAssertion( "BTO:0001833") +AnnotationAssertion( "CALOHA:TS-2094") +AnnotationAssertion( "EFO:0000894") +AnnotationAssertion( "EHDA:10096") +AnnotationAssertion( "EHDAA2:0001402") +AnnotationAssertion( "EHDAA:4655") +AnnotationAssertion( "EMAPA:17270") +AnnotationAssertion( "FMA:9907") +AnnotationAssertion( "GAID:708") +AnnotationAssertion( "MA:0000223") +AnnotationAssertion( "MAT:0000101") +AnnotationAssertion( "MESH:D010275") +AnnotationAssertion( "MIAA:0000101") +AnnotationAssertion( "NCIT:C12764") +AnnotationAssertion( "SCTID:362496006") +AnnotationAssertion( "TAO:0001575") +AnnotationAssertion( "VHOG:0000755") +AnnotationAssertion( "Wikipedia:Parasympathetic_nervous_system") +AnnotationAssertion( "ZFA:0001575") +AnnotationAssertion(rdfs:label "parasympathetic nervous system") +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (somatic nervous system) + +AnnotationAssertion(Annotation( "NLXANAT:100301") "Part of peripheral nervous system that includes the somatic parts of the cranial and spinal nerves and their ganglia and the peripheral sensory receptors.") +AnnotationAssertion( "EFO:0000892") +AnnotationAssertion( "FMA:9904") +AnnotationAssertion( "MA:0002850") +AnnotationAssertion( "MAT:0000099") +AnnotationAssertion( "MIAA:0000099") +AnnotationAssertion( "NLXANAT:100301") +AnnotationAssertion( "Wikipedia:Somatic_nervous_system") +AnnotationAssertion(rdfs:label "somatic nervous system") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (sympathetic nervous system) AnnotationAssertion(Annotation( "GO:0048485") "The sympathetic nervous system is one of the two divisions of the vertebrate autonomic nervous system (the other being the parasympathetic nervous system). The sympathetic preganglionic neurons have their cell bodies in the thoracic and lumbar regions of the spinal cord and connect to the paravertebral chain of sympathetic ganglia. Innervate heart and blood vessels, sweat glands, viscera and the adrenal medulla. Most sympathetic neurons, but not all, use noradrenaline as a post-ganglionic neurotransmitter [GO].") @@ -39127,6 +45785,9 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (non-material anatomical boundary) AnnotationAssertion(Annotation( "CARO:0000010") "A non-material anatomical entity of two dimensions. Anatomical boundaries are contiguous structures.") +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "AEO:0000192") AnnotationAssertion( "CARO:0000010") AnnotationAssertion( "FMA:50705") @@ -39137,6 +45798,7 @@ SubClassOf( (endocrine pancreas) AnnotationAssertion(Annotation( "GO:GO") Annotation( "http://orcid.org/0000-0002-6601-2165") "The part of the pancreas that is part of the endocrine system and is made up of islet cells, which produce insulin, glucagon and somatostatin.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0000650") AnnotationAssertion( "CALOHA:TS-1302") AnnotationAssertion( "EFO:0002542") @@ -39165,6 +45827,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (exocrine pancreas) AnnotationAssertion(Annotation( "GOC:GO") Annotation( "http://orcid.org/0000-0002-6601-2165") "The part of the pancreas that is part of the exocrine system and which produces and store zymogens of digestive enzymes, such as chymotrypsinogen and trypsinogen in the acinar cells [GO].") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0010407") AnnotationAssertion( "BTO:0000434") AnnotationAssertion( "CALOHA:TS-1241") @@ -39201,7 +45864,7 @@ AnnotationAssertion( "compound eye") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (camera-type eye) @@ -39287,7 +45950,7 @@ AnnotationAssertion( "XAO:0000218") AnnotationAssertion(rdfs:label "appendage") SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (lamina propria) @@ -39343,12 +46006,11 @@ AnnotationAssertion( "WBbt:0005739") AnnotationAssertion( "Wikipedia:Head") AnnotationAssertion( "XAO:0003024") -AnnotationAssertion( "ZFA:0001114") AnnotationAssertion( "galen:Head") AnnotationAssertion(rdfs:label "head") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (serous membrane) @@ -39393,13 +46055,14 @@ AnnotationAssertion(rdfs:label " SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (ganglion) AnnotationAssertion(Annotation( "Wikipedia:Ganglion") Annotation( "https://github.com/obophenotype/uberon/issues/300") "A biological tissue mass, most commonly a mass of nerve cell bodies.") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0010426") AnnotationAssertion( "AEO:0000135") AnnotationAssertion( "BAMS:G") @@ -39446,6 +46109,7 @@ SubClassOf( (vessel) AnnotationAssertion(Annotation( "https://orcid.org/0000-0002-6601-2165") "A tubular structure that contains, conveys body fluid, such as blood or lymph.") +AnnotationAssertion( ) AnnotationAssertion(rdfs:label "vessel") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -39471,6 +46135,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (large intestine) AnnotationAssertion(Annotation( "ISBN:0073040584") Annotation( "Wikipedia:Large_intestine_(anatomy)") "A subdivision of the digestive tract that connects the small intestine to the cloaca or anus. Lacks or has few villi[Kardong].") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0010396") AnnotationAssertion( "BTO:0000706") AnnotationAssertion( "CALOHA:TS-1306") @@ -39493,7 +46158,7 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anatomical wall) @@ -39509,6 +46174,9 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (anatomical structure) AnnotationAssertion(Annotation( "CARO:0000003") "Material anatomical entity that is a single connected structure with inherent 3D shape generated by coordinated expression of the organism's own genome.") +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "AAO:0010825") AnnotationAssertion( "AEO:0000003") AnnotationAssertion( "BILA:0000003") @@ -39535,6 +46203,9 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (organ) AnnotationAssertion(Annotation( "Wikipedia:Organ_(anatomy)") "Anatomical structure that performs a specific function or group of functions [WP].") +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:4") AnnotationAssertion( "CARO:0020004") AnnotationAssertion( "EFO:0000634") @@ -39563,6 +46234,9 @@ SubClassOf( (organ part) AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") "A multicellular structure that is a part of an organ.") +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "AAO:0011124") AnnotationAssertion( "BIRNLEX:16") AnnotationAssertion( "EFO:0000635") @@ -39576,6 +46250,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (respiratory tract) AnnotationAssertion(Annotation( "https://orcid.org/0000-0002-6601-2165") "Anatomical structure that is part of the respiratory system. In mammals consists of upper and lower tracts.") +AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001606") AnnotationAssertion( "EHDAA:1568") AnnotationAssertion( "EHDAA:2219") @@ -39632,6 +46307,9 @@ DisjointClasses( (death stage) AnnotationAssertion(Annotation( "XAO:0000437") "End of the life of an organism.") +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "XAO:0000437") AnnotationAssertion( "XtroDO:0000085") AnnotationAssertion(rdfs:label "death stage") @@ -39671,7 +46349,7 @@ AnnotationAssertion( "subdivision of skeletal system") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (external ectoderm) @@ -39731,6 +46409,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (zona pellucida) AnnotationAssertion(Annotation( "Wikipedia:Zona_pellucida") "A glycoprotein membrane surrounding the plasma membrane of an oocyte. It is a vital constitutive part of the latter, external but not extraneous to it. The zona pellucida first appears in multilaminar primary oocytes.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0003135") AnnotationAssertion( "EHDAA2:0002220") AnnotationAssertion( "EHDAA:31") @@ -39861,6 +46540,9 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (life cycle) AnnotationAssertion(Annotation( "https://orcid.org/0000-0002-6601-2165") "An entire span of an organism's life. In metazoans, commences with the zygote stage and ends with the death of the organism.") +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "FBdv:00000000") AnnotationAssertion( "HsapDv:0000001") AnnotationAssertion( "MmusDv:0000001") @@ -39875,6 +46557,9 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (life cycle stage) AnnotationAssertion(Annotation( "https://orcid.org/0000-0002-6601-2165") "A spatiotemporal region encompassing some part of the life cycle of an organism.") +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "BILS:0000105") AnnotationAssertion( "EFO:0000399") AnnotationAssertion( "FBdv:00007012") @@ -39977,7 +46662,7 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (neurula stage) @@ -39993,7 +46678,7 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (organogenesis stage) @@ -40010,11 +46695,12 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (lung connective tissue) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8") Annotation( "MGI:anna") Annotation( "MP:0002276") Annotation( "PMID:14635660") "The connective tissue located between the respiratory (airway and alveolar) epithelium, the capillary endothelium and pleural mesothelium; it contains basement membrane composed of collagen, elastin, proteoglycans, and fibronectin.") +AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35521") AnnotationAssertion( "FMA:27533") AnnotationAssertion( "MA:0001782") @@ -40088,7 +46774,7 @@ AnnotationAssertion( "Wikipedia:Nucleus_(neuroanatomy)") AnnotationAssertion(rdfs:label "neural nucleus") SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cranial nerve nucleus) @@ -40103,18 +46789,45 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (facial nucleus) + +AnnotationAssertion(Annotation( "ISBN:0838580343") Annotation( "MP:0000909") "The group of motor neurons residing in the pons that innervate the muscles of facial expression.") +AnnotationAssertion( "BAMS:7") +AnnotationAssertion( "BAMS:7N") +AnnotationAssertion( "BAMS:VII") +AnnotationAssertion( "BM:Pons-VII") +AnnotationAssertion( "DHBA:12420") +AnnotationAssertion( "EHDAA2:0004638") +AnnotationAssertion( "EMAPA:35338") +AnnotationAssertion( "EV:0100267") +AnnotationAssertion( "FMA:54572") +AnnotationAssertion( "MA:0001014") +AnnotationAssertion( "MESH:D065828") +AnnotationAssertion( "NCIT:C12898") +AnnotationAssertion( "SCTID:280166009") +AnnotationAssertion( "VHOG:0001412") +AnnotationAssertion(rdfs:label "facial nucleus") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (anterior region of body) AnnotationAssertion(rdfs:label "anterior region of body") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (posterior region of body) AnnotationAssertion(rdfs:label "posterior region of body") SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (membranous layer) @@ -40129,6 +46842,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (anal canal) AnnotationAssertion(Annotation( "Wikipedia:Anal_canal") "The terminal part of the large intestine, continuous proximally with the rectum and distally terminates with the anus.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0001978") AnnotationAssertion( "CALOHA:TS-2160") AnnotationAssertion( "EMAPA:18256") @@ -40204,7 +46918,7 @@ AnnotationAssertion(rdfs:label " SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (embryonic cloaca) @@ -40255,7 +46969,7 @@ AnnotationAssertion(rdfs:label " EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (oral opening) @@ -40309,6 +47023,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (pair of lungs) AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") "The pair of anatomical structures comprised of a left lung and right lung.") +AnnotationAssertion( ) AnnotationAssertion( "FMA:68877") AnnotationAssertion(rdfs:label "pair of lungs") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) @@ -40349,6 +47064,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (blood) AnnotationAssertion(Annotation( "FMA:9670") Annotation( "Wikipedia:Blood") Annotation( "http://orcid.org/0000-0002-6601-2165") Annotation( "https://github.com/obophenotype/uberon/issues/9") "A fluid that is composed of blood plasma and erythrocytes.") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0000046") AnnotationAssertion( "BTO:0000089") AnnotationAssertion( "CALOHA:TS-0079") @@ -40386,11 +47102,29 @@ AnnotationAssertion(rdfs:label " EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (pallium) + +AnnotationAssertion(Annotation( "GO:0021543") Annotation( "ISBN:0471888893") Annotation( "Wikipedia:Pallium_(neuroanatomy)") Annotation( "https://github.com/obophenotype/uberon/issues/287") "Dorsal part (roof region) of the telencephalon[GO].") +AnnotationAssertion( "BTO:0003399") +AnnotationAssertion( "DMBA:15903") +AnnotationAssertion( "EFO:0003534") +AnnotationAssertion( "SCTID:369224000") +AnnotationAssertion( "TAO:0000505") +AnnotationAssertion( "TAO:0007007") +AnnotationAssertion( "Wikipedia:Avian_pallium") +AnnotationAssertion( "Wikipedia:Pallium_(neuroanatomy)") +AnnotationAssertion( "ZFA:0000505") +AnnotationAssertion( "neuronames:3240") +AnnotationAssertion(rdfs:label "pallium") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (tetrapod frontal bone) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8") Annotation( "MP:0000107") Annotation( "PMID:7914451") Annotation( "Wikipedia:Frontal_bone") "The bone forming the forehead and roof of the eye orbit.") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0000206") AnnotationAssertion( "EMAPA:19016") AnnotationAssertion( "FMA:52734") @@ -40457,9 +47191,29 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (subarachnoid space) + +AnnotationAssertion(Annotation( "GOC:add") Annotation( "Wikipedia:Subarachnoid_space") Annotation( "https://sourceforge.net/p/obo/mammalian-phenotype-requests/1168/") "The space between the arachnoid and pia mater.") +AnnotationAssertion( "BTO:0000230") +AnnotationAssertion( "EMAPA:32666") +AnnotationAssertion( "FMA:83716") +AnnotationAssertion( "GAID:689") +AnnotationAssertion( "MESH:D013346") +AnnotationAssertion( "SCTID:362311001") +AnnotationAssertion( "Wikipedia:Subarachnoid_space") +AnnotationAssertion(rdfs:label "subarachnoid space") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (colonic mucosa) AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") "Mucosa that is part of a colon. The mucosa of the colon is lined by a simple columnar epithelium with a thin brush border and numerous goblet cells.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0000271") AnnotationAssertion( "CALOHA:TS-0164") AnnotationAssertion( "EFO:0003038") @@ -40476,6 +47230,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (duodenal mucosa) AnnotationAssertion(Annotation( "OBOL:automatic") "A mucosa that is part of a duodenum [Automatically generated definition].") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0000367") AnnotationAssertion( "CALOHA:TS-0213") AnnotationAssertion( "EMAPA:27235") @@ -40565,7 +47320,7 @@ AnnotationAssertion(rdfs:label " SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (parenchyma) @@ -40587,7 +47342,7 @@ AnnotationAssertion( "Wikipedia:Parenchyma") AnnotationAssertion(rdfs:label "parenchyma") SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) @@ -40623,7 +47378,7 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -40656,9 +47411,31 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (mandibular nerve) + +AnnotationAssertion(Annotation( "MP:0009800") Annotation( "Wikipedia:Mandibular_nerve") "The motor and sensory nerve subdivision of the trigeminal nerve that transmits sensory information from the auricle, the external acoustic meatus, tympanic membrane, temporal region, the cheek, the skin overlying the mandible, the anterior portion of the tongue, the floor of the mouth, lower teeth and gingiva and transmits motor information from the muscles of mastication, the mylohyoid muscle and digastric muscle and the muscles tensor tympani and tensor veli palatini.") +AnnotationAssertion( ) +AnnotationAssertion( "AAO:0010688") +AnnotationAssertion( "AAO:0010703") +AnnotationAssertion( "BTO:0001375") +AnnotationAssertion( "EHDAA2:0002086") +AnnotationAssertion( "EMAPA:17798") +AnnotationAssertion( "FMA:52996") +AnnotationAssertion( "GAID:834") +AnnotationAssertion( "MA:0001101") +AnnotationAssertion( "MESH:D008340") +AnnotationAssertion( "NCIT:C32779") +AnnotationAssertion( "SCTID:280212008") +AnnotationAssertion( "VHOG:0001345") +AnnotationAssertion( "Wikipedia:Mandibular_nerve") +AnnotationAssertion(rdfs:label "mandibular nerve") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (maxillary nerve) AnnotationAssertion(Annotation( "MP:0009799") Annotation( "Wikipedia:Maxillary_nerve") "The sensory nerve subdivision of the trigeminal nerve that transmits sensory information from the palate, upper teeth and gingiva, the skin between the palpebral fissure and the mouth, and from the nasal cavity and maxillary sinuses.") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0010670") AnnotationAssertion( "BTO:0001378") AnnotationAssertion( "EHDAA2:0002087") @@ -40688,6 +47465,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (musculature of body) AnnotationAssertion(Annotation( "VSAO:0000033") "The subdivision of the musculoskeletal system that consists of all the muscles of the body[VSAO, modified].") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0000307") AnnotationAssertion( "BILA:0000088") AnnotationAssertion( "BTO:0001369") @@ -40702,13 +47480,14 @@ AnnotationAssertion( "musculature of body") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lens cortex) AnnotationAssertion(Annotation( "http://www.thefreedictionary.com/lens+cortex") "Tissue that surrounds the lens nucleus.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0001632") AnnotationAssertion( "CALOHA:TS-0542") AnnotationAssertion( "FMA:58970") @@ -40725,6 +47504,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (lens nucleus) AnnotationAssertion(Annotation( "BTO:0001633") "The core of the crystalline lens, surrounded by the cortex.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0001633") AnnotationAssertion( "FMA:58971") AnnotationAssertion( "MESH:D007907") @@ -40737,9 +47517,26 @@ SubClassOf( ObjectSomeValuesFrom( SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (leptomeninx) + +AnnotationAssertion(Annotation( "Wikipedia:Leptomeninges") Annotation( "https://github.com/obophenotype/uberon/issues/300") "Pia mater or arachnoid mater.") +AnnotationAssertion( "BTO:0001634") +AnnotationAssertion( "CALOHA:TS-0546") +AnnotationAssertion( "FMA:231515") +AnnotationAssertion( "NCIT:C32979") +AnnotationAssertion( "NLXANAT:090207") +AnnotationAssertion( "SCTID:362303006") +AnnotationAssertion( "Wikipedia:Leptomeninges") +AnnotationAssertion( "neuronames:2347") +AnnotationAssertion(rdfs:label "leptomeninx") +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (colonic epithelium) AnnotationAssertion(Annotation( "OBOL:automatic") "An epithelium that is part of a colon [Automatically generated definition].") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0001709") AnnotationAssertion( "CALOHA:TS-0163") AnnotationAssertion( "EMAPA:18941") @@ -40753,6 +47550,18 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (nasal vestibule) + +AnnotationAssertion(Annotation( "Wikipedia:Nasal_vestibule") "The nasal vestibule is the most anterior part of the nasal cavity. It's enclosed by the cartilages of nose and lined by the same epithelium of the skin. The other part of the nasal cavity, which is lined by the respiratory epithelium, is called nasal cavity proper. [WP,unvetted].") +AnnotationAssertion( "BTO:0001761") +AnnotationAssertion( "CALOHA:TS-0660") +AnnotationAssertion( "FMA:59644") +AnnotationAssertion( "SCTID:278940000") +AnnotationAssertion( "Wikipedia:Nasal_vestibule") +AnnotationAssertion(rdfs:label "nasal vestibule") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (serous gland) AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") Annotation( "http://www.siumed.edu/~dking2/intro/glands.htm") "A gland in which the principal secretory cells are serous secreting cells.") @@ -40803,6 +47612,19 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (arachnoid trabecula) + +AnnotationAssertion(Annotation( "Wikipedia:Arachnoid_trabeculae") "The arachnoid trabeculae are delicate strands of connective tissue that loosely connect the two innermost layers of the meninges -- the arachnoid mater and the pia mater. They are found within the subarachnoid space where cerebrospinal fluid is also found. Embryologically, the trabeculae are the remnants of the common precursor that forms both the arachnoid and pial layers of the meninges.") +AnnotationAssertion( "BTO:0002500") +AnnotationAssertion( "FMA:83979") +AnnotationAssertion( "Wikipedia:Arachnoid_trabeculae") +AnnotationAssertion(rdfs:label "arachnoid trabecula") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (trabecula) AnnotationAssertion(Annotation( "GO:0060343") Annotation( "Wikipedia:Trabecula") "A small, often microscopic, tissue element in the form of a small beam, strut or rod, generally having a mechanical function, and usually but not necessarily composed of dense collagenous tissue. On histological section, a trabecula can look like a septum, but in three dimensions they are topologically distinct, with trabeculae being roughly rod or pillar-shaped and septa being sheet-like. Trabeculae are usually composed of dense fibrous tissue, i.e. mainly of collagen, and in most cases provide mechanical strengthening or stiffening to a soft solid organ, such as the spleen. They can be composed of other materials, such as bone or muscle[WP].") @@ -40831,9 +47653,23 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (cavernous artery) + +AnnotationAssertion(Annotation( "BTO:0002996") "Any of several small branches of the internal carotid artery that supply the trigeminal ganglion and the walls of the cavernous and petrosal sinuses.") +AnnotationAssertion( "BTO:0002996") +AnnotationAssertion( "FMA:70527") +AnnotationAssertion(rdfs:label "cavernous artery") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (organism substance) AnnotationAssertion(Annotation( "http://orcid.org/0000-0001-9114-8737") "Material anatomical entity in a gaseous, liquid, semisolid or solid state; produced by anatomical structures or derived from inhaled and ingested substances that have been modified by anatomical structures as they pass through the body.") +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "AAO:0010839") AnnotationAssertion( "AEO:0000004") AnnotationAssertion( "BILA:0000004") @@ -40860,6 +47696,9 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (anatomical space) AnnotationAssertion(Annotation( "http://orcid.org/0000-0001-9114-8737") "Non-material anatomical entity of three dimensions, that is generated by morphogenetic or other physiologic processes; is surrounded by one or more anatomical structures; contains one or more organism substances or anatomical structures.") +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "AAO:0010110") AnnotationAssertion( "AEO:0000005") AnnotationAssertion( "BILA:0000005") @@ -40880,6 +47719,9 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (material anatomical entity) AnnotationAssertion(Annotation( "http://orcid.org/0000-0001-9114-8737") "Anatomical entity that has mass.") +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "AAO:0010264") AnnotationAssertion( "AEO:0000006") AnnotationAssertion( "BILA:0000006") @@ -40898,6 +47740,9 @@ DisjointClasses( (immaterial anatomical entity) AnnotationAssertion(Annotation( "http://orcid.org/0000-0001-9114-8737") "Anatomical entity that has no mass.") +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "AAO:0010265") AnnotationAssertion( "AEO:0000007") AnnotationAssertion( "BILA:0000007") @@ -40915,6 +47760,10 @@ SubClassOf( (anatomical system) AnnotationAssertion(Annotation( "CARO:0000011") "Multicellular, connected anatomical structure that has multiple organs as parts and whose parts work together to achieve some shared function.") +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "AAO:0000007") AnnotationAssertion( "AEO:0000011") AnnotationAssertion( "BILA:0000011") @@ -40948,6 +47797,9 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (multicellular organism) AnnotationAssertion(Annotation( "CARO:0000012") Annotation( "Wikipedia:Multi-cellular_organism") Annotation( "http://orcid.org/0000-0001-9114-8737") "Anatomical structure that is an individual member of a species and consists of more than one cell.") +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "AAO:0010026") AnnotationAssertion( "AEO:0000191") AnnotationAssertion( "BILA:0000012") @@ -40998,6 +47850,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (female reproductive system) AnnotationAssertion(Annotation( "MP:0001119") Annotation( "Wikipedia:Female_genitalia") Annotation( "http://orcid.org/0000-0002-6601-2165") "The organs and associated structures associated with bearing offspring in a female animal.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0000083") AnnotationAssertion( "CALOHA:TS-1303") AnnotationAssertion( "EFO:0000969") @@ -41026,6 +47879,9 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (organism subdivision) AnnotationAssertion(Annotation( "CARO:0000032") Annotation( "CARO:DOS") Annotation( "http://orcid.org/0000-0001-9114-8737") "Anatomical structure which is a subdivision of a whole organism, consisting of components of multiple anatomical systems, largely surrounded by a contiguous region of integument.") +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "AAO:0010053") AnnotationAssertion( "AEO:0000032") AnnotationAssertion( "BILA:0000032") @@ -41056,6 +47912,9 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (acellular anatomical structure) AnnotationAssertion(Annotation( "http://orcid.org/0000-0001-9114-8737") "Anatomical structure that consists of cell parts and cell substances and together does not constitute a cell or a tissue.") +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "AAO:0010268") AnnotationAssertion( "AEO:0000040") AnnotationAssertion( "BILA:0000040") @@ -41073,6 +47932,9 @@ SubClassOf( (anatomical cluster) AnnotationAssertion(Annotation( "FBbt:00007277") "Anatomical group whose component anatomical structures lie in close proximity to each other.") +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "VHOG:0001737") AnnotationAssertion(rdfs:label "anatomical cluster") SubClassOf( ) @@ -41105,6 +47967,9 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (tissue) AnnotationAssertion(Annotation( "CARO:0000043") "Multicellular anatomical structure that consists of many cells of one or a few types, arranged in an extracellular matrix such that their long-range organisation is at least partly a repetition of their short-range organisation.") +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "AAO:0000607") AnnotationAssertion( "AAO:0010054") AnnotationAssertion( "AEO:0000043") @@ -41134,6 +47999,9 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (multi-tissue structure) AnnotationAssertion(Annotation( "CARO:0000055") Annotation( "http://orcid.org/0000-0001-9114-8737") "Anatomical structure that has as its parts two or more portions of tissue of at least two different types and which through specific morphogenetic processes forms a single distinct structural unit demarcated by bona-fide boundaries from other distinct structural units of different types.") +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "AAO:0010048") AnnotationAssertion( "AEO:0000055") AnnotationAssertion( "BILA:0000055") @@ -41180,7 +48048,7 @@ EquivalentClasses( ObjectUnionOf( SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (simple cuboidal epithelium) @@ -41370,7 +48238,7 @@ AnnotationAssertion( "abdomen") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (embryo) @@ -41425,7 +48293,7 @@ AnnotationAssertion( "Classically the germ layers are ectoderm, mesoderm and endoderm. Alternatively: primary = ectoderm, endoderm; secondary=mesoderm; tertiary=dorsal mesoderm, NC[https://github.com/obophenotype/uberon/wiki/The-neural-crest]") AnnotationAssertion(rdfs:label "germ layer") SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (ectoderm) @@ -41532,7 +48400,7 @@ AnnotationAssertion(rdfs:label " SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (proctodeum) @@ -41550,13 +48418,14 @@ AnnotationAssertion(rdfs:label " SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stomach) AnnotationAssertion(Annotation( "ISBN:0073040584") Annotation( "Wikipedia:Stomach") Annotation( "https://orcid.org/0000-0002-6601-2165") "An expanded region of the vertebrate alimentary tract that serves as a food storage compartment and digestive organ. A stomach is lined, in whole or in part by a glandular epithelium.") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0000579") AnnotationAssertion( "ANISEED:1235297") AnnotationAssertion( "BTO:0001307") @@ -41583,13 +48452,14 @@ AnnotationAssertion(rdfs:label " SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (aorta) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8") Annotation( "MESH:A07.231.114.056") Annotation( "MP:0000272") Annotation( "Wikipedia:Aorta") Annotation( "http://orcid.org/0000-0002-6601-2165") "The main trunk of the systemic arterial system that carries blood from the heart to all the organs and other structures of the body, bringing oxygenated blood to all parts of the body in the systemic circulation.") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0010213") AnnotationAssertion( "BTO:0000135") AnnotationAssertion( "CALOHA:TS-0046") @@ -41618,6 +48488,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (heart) AnnotationAssertion(Annotation( "Wikipedia:Heart") Annotation( "http://orcid.org/0000-0002-6601-2165") "A myogenic muscular circulatory organ found in the vertebrate cardiovascular system composed of chambers of cardiac muscle. It is the primary circulatory organ.") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0010210") AnnotationAssertion( "BILA:0000020") AnnotationAssertion( "BTO:0000562") @@ -41650,7 +48521,7 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -41676,7 +48547,7 @@ AnnotationAssertion( "ZFA:0001158") AnnotationAssertion(rdfs:label "endocrine system") SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) @@ -41684,6 +48555,7 @@ DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) +DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) @@ -41698,6 +48570,7 @@ DisjointClasses( (brain) AnnotationAssertion(Annotation( "Wikipedia:Brain") Annotation( "https://github.com/obophenotype/uberon/issues/300") "The brain is the center of the nervous system in all vertebrate, and most invertebrate, animals. Some primitive animals such as jellyfish and starfish have a decentralized nervous system without a brain, while sponges lack any nervous system at all. In vertebrates, the brain is located in the head, protected by the skull and close to the primary sensory apparatus of vision, hearing, balance, taste, and smell[WP].") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0010478") AnnotationAssertion( "ABA:Brain") AnnotationAssertion( "BAMS:Br") @@ -41741,6 +48614,48 @@ SubClassOf( ObjectSomeValuesFrom( SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (cerebral cortex) + +AnnotationAssertion(Annotation( "BIRNLEX:1494") "The thin layer of gray matter on the surface of the cerebral hemisphere that develops from the telencephalon. It consists of the neocortex (6 layered cortex or isocortex), the hippocampal formation and the olfactory cortex.") +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( "BAMS:C") +AnnotationAssertion( "BAMS:CTX") +AnnotationAssertion( "BAMS:Cerebral_cortex") +AnnotationAssertion( "BAMS:Cx") +AnnotationAssertion( "BIRNLEX:1494") +AnnotationAssertion( "BM:Tel-Cx") +AnnotationAssertion( "BTO:0000233") +AnnotationAssertion( "CALOHA:TS-0091") +AnnotationAssertion( "DHBA:10159") +AnnotationAssertion( "EFO:0000328") +AnnotationAssertion( "EHDAA2:0000234") +AnnotationAssertion( "EHDAA:5464") +AnnotationAssertion( "EMAPA:17544") +AnnotationAssertion( "EV:0100166") +AnnotationAssertion( "FMA:61830") +AnnotationAssertion( "GAID:629") +AnnotationAssertion( "HBA:4008") +AnnotationAssertion( "MA:0000185") +AnnotationAssertion( "MAT:0000108") +AnnotationAssertion( "MBA:688") +AnnotationAssertion( "MESH:D002540") +AnnotationAssertion( "MIAA:0000108") +AnnotationAssertion( "NCIT:C12443") +AnnotationAssertion( "PBA:128011354") +AnnotationAssertion( "SCTID:362880003") +AnnotationAssertion( "VHOG:0000722") +AnnotationAssertion( "Wikipedia:Cerebral_cortex") +AnnotationAssertion(rdfs:label "cerebral cortex") +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (lamina) AnnotationAssertion(Annotation( "Wikipedia:Lamina_of_the_vertebral_arch") "Any thin layer or plate.") @@ -41753,6 +48668,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (nerve of cervical vertebra) AnnotationAssertion(Annotation( "Wikipedia:Cervical_nerves") "The cervical nerves are the spinal nerves from the cervical vertebrae. Although there are seven cervical vertebrae (C1-C7), there are eight cervical nerves (C1-C8). All nerves except C8 emerge above their corresponding vertebrae, while the C8 nerve emerges below the C7 vertebra. (In the other portions of the spine, the nerve emerges below the vertebra with the same name. Dorsal (posterior) distribution includes the greater occipital (C2) and third occipital (C3). Ventral (anterior) distribution includes the cervical plexus (C1-C4) and brachial plexus (C5-C8) [WP,unvetted].") +AnnotationAssertion( ) AnnotationAssertion( "BAMS:cern") AnnotationAssertion( "FMA:5859") AnnotationAssertion( "NCIT:C32299") @@ -41778,6 +48694,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (cornea) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8") Annotation( "MESH:A09.371.060.217") Annotation( "MP:0001312") "The transparent anterior portion of the fibrous coat of the eye that serves as the chief refractory structure.") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0010344") AnnotationAssertion( "BTO:0000286") AnnotationAssertion( "CALOHA:TS-0171") @@ -41815,6 +48732,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (lens of camera-type eye) AnnotationAssertion(Annotation( "Wikipedia:Lens_(anatomy)") Annotation( "http://orcid.org/0000-0002-6601-2165") "A transparent and refractive lens located posterior to the iris. The lens of camera-type eye refracts light to be focused on the retina.") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0010348") AnnotationAssertion( "BTO:0000723") AnnotationAssertion( "CALOHA:TS-0545") @@ -41846,6 +48764,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (retina) AnnotationAssertion(Annotation( "Wikipedia:Retina") Annotation( "ZFIN:curator") "The retina is the innermost layer or coating at the back of the eyeball, which is sensitive to light and in which the optic nerve terminates.") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0010352") AnnotationAssertion( "BAMS:R") AnnotationAssertion( "BIRNLEX:1153") @@ -41886,6 +48805,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (eye) AnnotationAssertion(Annotation( "https://orcid.org/0000-0002-6601-2165") "An organ that detects light.") +AnnotationAssertion( ) AnnotationAssertion( "BILA:0000017") AnnotationAssertion( "BTO:0000439") AnnotationAssertion( "CALOHA:TS-0309") @@ -41964,7 +48884,7 @@ SubClassOf( ObjectSomeValuesFrom( SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -42002,6 +48922,7 @@ DisjointClasses( (pons) AnnotationAssertion(Annotation( "VHOG:0001176") "The part of the central nervous system lying between the medulla oblongata and the midbrain, ventral to the cerebellum.") +AnnotationAssertion( ) AnnotationAssertion( "BAMS:PONS") AnnotationAssertion( "BAMS:Pons") AnnotationAssertion( "BIRNLEX:733") @@ -42029,13 +48950,14 @@ AnnotationAssertion(rdfs:label " SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (reproductive system) AnnotationAssertion(Annotation( "Wikipedia:Reproductive_system") "Anatomical system that has as its parts the organs concerned with reproduction.") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0010258") AnnotationAssertion( "BILA:0000103") AnnotationAssertion( "BTO:0000081") @@ -42069,6 +48991,7 @@ DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) +DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) @@ -42111,6 +49034,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (ovary) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8") Annotation( "MP:0001126") Annotation( "Wikipedia:Ovary") "The gonad of a female organism which contains germ cells.") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0000371") AnnotationAssertion( "BILA:0000125") AnnotationAssertion( "BSA:0000080") @@ -42137,13 +49061,14 @@ AnnotationAssertion(rdfs:label " EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (skin epidermis) AnnotationAssertion(Annotation( "ISBN:0073040584") Annotation( "http://orcid.org/0000-0002-6601-2165") "The outer epithelial layer of the skin that is superficial to the dermis.") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0000143") AnnotationAssertion( "BTO:0000404") AnnotationAssertion( "CALOHA:TS-0283") @@ -42174,6 +49099,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (respiratory system) AnnotationAssertion(Annotation( "Wikipedia:Respiratory_system") Annotation( "http://orcid.org/0000-0002-6601-2165") "Functional system which consists of structures involved in respiration.") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0000541") AnnotationAssertion( "BTO:0000203") AnnotationAssertion( "CALOHA:TS-1319") @@ -42198,13 +49124,14 @@ AnnotationAssertion( "respiratory system") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) +DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) @@ -42230,6 +49157,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (digestive system) AnnotationAssertion(Annotation( "FB:gg") Annotation( "NLM:alimentary+system") Annotation( "Wikipedia:Digestive_system") "Anatomical system that has as its parts the organs devoted to the ingestion, digestion, and assimilation of food and the discharge of residual wastes.") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0000129") AnnotationAssertion( "BILA:0000082") AnnotationAssertion( "BTO:0000058") @@ -42257,6 +49185,7 @@ SubClassOf( ObjectSomeValuesFrom( SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) DisjointClasses( ) +DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) @@ -42271,6 +49200,7 @@ DisjointClasses( (renal system) AnnotationAssertion(Annotation( "DOI:10.1371/journal.pone.0099864") Annotation( "GO:0072001") "The renal system in an anatomical system that maintains fluid balance and contributes to electrolyte balance, acid/base balance, and disposal of nitrogenous waste products.") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0010257") AnnotationAssertion( "BILA:0000015") AnnotationAssertion( "BTO:0001244") @@ -42301,7 +49231,7 @@ AnnotationAssertion(rdfs:comment AnnotationAssertion(rdfs:label "renal system") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -42314,10 +49244,11 @@ AnnotationAssertion( "Wikipedia:Circulatory_system") AnnotationAssertion(rdfs:label "circulatory system") SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) +DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) @@ -42332,6 +49263,7 @@ DisjointClasses( (adipose tissue) AnnotationAssertion(Annotation( "MESH:A10.165.114") Annotation( "MGI:cwg") Annotation( "MP:0000003") Annotation( "Wikipedia:Adipose_tissue") Annotation( "http://orcid.org/0000-0002-6601-2165") "Portion of connective tissue composed of adipocytes enmeshed in areolar tissue.") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0000001") AnnotationAssertion( "AEO:000020") AnnotationAssertion( "BTO:0001487") @@ -42410,11 +49342,12 @@ AnnotationAssertion( "nervous system") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) DisjointClasses( ) @@ -42429,6 +49362,7 @@ DisjointClasses( (central nervous system) AnnotationAssertion(Annotation( "GO:0021551") Annotation( "http://www.frontiersinzoology.com/content/7/1/29") Annotation( "https://sourceforge.net/p/geneontology/ontology-requests/11422/") "The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the neural tube derivatives: the brain and spinal cord. In invertebrates it includes central ganglia plus nerve cord.") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0000090") AnnotationAssertion( "BAMS:CNS") AnnotationAssertion( "BILA:0000080") @@ -42458,12 +49392,27 @@ AnnotationAssertion(rdfs:label " SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (nerve fasciculus) + +AnnotationAssertion(Annotation( "BIRNLEX:872") Annotation( "FBbt:00005101") "A slender neuron projection bundle[FBbt]; A bundle of anatomical fibers, as of muscle or nerve (American Heritage Dictionary 4th ed).") +AnnotationAssertion( "BIRNLEX:872") +AnnotationAssertion( "BTO:0002191") +AnnotationAssertion( "EMAPA:36605") +AnnotationAssertion( "FMA:12235") +AnnotationAssertion( "NCIT:C32586") +AnnotationAssertion( "TGMA:0000088") +AnnotationAssertion( "Wikipedia:Nervous_system_fascicle") +AnnotationAssertion(rdfs:comment "EDITOR_NOTE note FBbt class not disjoint from tract. Consider merging with 'neuron projection bundle'") +AnnotationAssertion(rdfs:label "nerve fasciculus") +SubClassOf( ) + # Class: (nerve) AnnotationAssertion(Annotation( "FBbt:00005105") Annotation( "http://orcid.org/0000-0002-6601-2165") "An enclosed, cable-like bundle of axons in the peripheral nervous system originating in a nerve root in the central nervous system (or a condensed nervous structure) connecting with peripheral structures.") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0011070") AnnotationAssertion( "AEO:0000137") AnnotationAssertion( "BAMS:n") @@ -42539,6 +49488,40 @@ SubClassOf( ObjectSomeValuesFrom( SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (gustatory system) + +AnnotationAssertion(Annotation( "NLXANAT:090803") "The sensory system for the sense of taste.") +AnnotationAssertion( "AAO:0010577") +AnnotationAssertion( "BILA:0000143") +AnnotationAssertion( "EFO:0000830") +AnnotationAssertion( "FMA:7194") +AnnotationAssertion( "MA:0002446") +AnnotationAssertion( "MAT:0000275") +AnnotationAssertion( "MIAA:0000275") +AnnotationAssertion( "NLXANAT:090803") +AnnotationAssertion( "SCTID:423940004") +AnnotationAssertion( "TAO:0001101") +AnnotationAssertion( "Wikipedia:Gustatory_system") +AnnotationAssertion( "XAO:0003197") +AnnotationAssertion( "ZFA:0001101") +AnnotationAssertion( "neuronames:2889") +AnnotationAssertion(rdfs:label "gustatory system") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +DisjointClasses( ) +DisjointClasses( ) +DisjointClasses( ) +DisjointClasses( ) +DisjointClasses( ) +DisjointClasses( ) +DisjointClasses( ) +DisjointClasses( ) +DisjointClasses( ) +DisjointClasses( ) + # Class: (yolk sac) AnnotationAssertion(Annotation( "Wikipedia:Yolk_sac") "A sac-like expansion of the ventral wall of the intestine, narrowed into a yolk stalk near the body[Hyman's]. Membranous sac attached to an embryo, providing early nourishment in the form of yolk in bony fishes, sharks, reptiles, birds, and primitive mammals. It functions as the developmental circulatory system of the human embryo, before internal circulation begins. In the mouse, the yolk sac is the first site of blood formation, generating primitive macrophages and erythrocytes[WP].") @@ -42609,12 +49592,13 @@ AnnotationAssertion(rdfs:comment AnnotationAssertion(rdfs:label "chordate pharynx") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (esophagus) AnnotationAssertion(Annotation( "Wikipedia:Esophagus") Annotation( "http://www.rivm.nl/interspeciesinfo/inter/oesophagus/") "Tube that connects the pharynx to the stomach. In mammals, the oesophagus connects the buccal cavity with the stomach. The stratified squamous non-keratinised epithelium lining the buccal cavity is continued through the pharynx down into the oesophagus. The lowest part of the oesophagus (ca. 2 cm) is lined with gastric mucosa and covered by peritoneum. The main body of the oesophagus is lined with small, simple mucous glands. Each gland opens into the lumen by a long duct which pierces the muscularis mucosae (Wilson and Washington, 1989). A sphincter is situated at the point where the oesophagus enters the stomach to prevent gastro-oesophageal reflux, i.e. to prevent acidic gastric contents from reaching stratified epithelia of the oesophagus, where they can cause inflammation and irritation (Wilson and Washington, 1989; Brown et al., 1993).") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0000145") AnnotationAssertion( "ANISEED:1235301") AnnotationAssertion( "BTO:0000959") @@ -42738,6 +49722,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (rectum) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8") Annotation( "MP:0000492") Annotation( "http://orcid.org/0000-0002-6601-2165") "The terminal portion of the intestinal tube, terminating with the anus.") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0010401") AnnotationAssertion( "BTO:0001158") AnnotationAssertion( "CALOHA:TS-1180") @@ -42770,6 +49755,9 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (anatomical entity) AnnotationAssertion(Annotation( "FMA:62955") Annotation( "http://orcid.org/0000-0001-9114-8737") "Biological entity that is either an individual member of a biological species or constitutes the structural organization of an individual member of a biological species.") +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "AAO:0010841") AnnotationAssertion( "AEO:0000000") AnnotationAssertion( "BFO:0000004") @@ -42791,6 +49779,7 @@ AnnotationAssertion(rdfs:label " # Class: (ventral pancreatic duct) AnnotationAssertion(Annotation( "Wikipedia:Pancreatic_duct") "A duct joining the pancreas to the common bile duct to supply pancreatic juices which aid in digestion provided by the exocrine pancreas. The pancreatic duct joins the common bile duct just prior to the ampulla of Vater, after which both ducts perforate the medial side of the second portion of the duodenum at the major duodenal papilla.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0002362") AnnotationAssertion( "EHDAA2:0001396") AnnotationAssertion( "EHDAA:6905") @@ -42830,6 +49819,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (external carotid artery) AnnotationAssertion(Annotation( "MGI:anna") "A terminal branch of the left or right common carotid artery which supplies oxygenated blood to to the throat, neck glands, tongue, face, mouth, ear, scalp and dura mater of the meninges[MP].") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0010218") AnnotationAssertion( "AAO:0010416") AnnotationAssertion( "BTO:0004696") @@ -42854,6 +49844,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (superficial cervical artery) AnnotationAssertion(Annotation( "Wikipedia:Superficial_part_of_transverse_cervical_artery") "It ascends beneath the anterior margin of the trapezius, distributing branches to it, and to the neighboring muscles and lymph glands in the neck, and anastomosing with the superficial branch of the descending branch of the occipital artery.") +AnnotationAssertion( ) AnnotationAssertion( "FMA:10665") AnnotationAssertion( "MA:0002052") AnnotationAssertion( "NCIT:C53005") @@ -42869,6 +49860,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (inferior vena cava) AnnotationAssertion(Annotation( "Wikipedia:Inferior_vena_cava") Annotation( "http://orcid.org/0000-0002-6601-2165") "A vein that carries deoxygenated blood from the lower half of the body into the right atrium of the heart.") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0011083") AnnotationAssertion( "BTO:0002682") AnnotationAssertion( "EHDAA2:0000611") @@ -42898,7 +49890,7 @@ AnnotationAssertion( "ileocecal junction") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -43042,6 +50034,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (vertebral bone 1) AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") "The first vertebral bone in the vertebral column.") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0000709") AnnotationAssertion( "EHDAA:10606") AnnotationAssertion( "EMAPA:19431") @@ -43061,6 +50054,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (vertebral bone 2) AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") "The second vertebral bone in the vertebral column.") +AnnotationAssertion( ) AnnotationAssertion( "EHDAA:10608") AnnotationAssertion( "EMAPA:19432") AnnotationAssertion( "FMA:12520") @@ -43079,6 +50073,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (caudal vertebra) AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") "Any vertebral bone that is part of the caudal region of the vertebral column (tail or coccyx).") +AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18374") AnnotationAssertion( "FMA:12527") AnnotationAssertion( "MA:0000310") @@ -43130,7 +50125,7 @@ AnnotationAssertion(rdfs:label " SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (lobe of liver) @@ -43184,6 +50179,7 @@ SubClassOf( (vertebral column) AnnotationAssertion(Annotation( "VSAO:0000185") Annotation( "https://orcid.org/0000-0002-6601-2165") Annotation( "https://sourceforge.net/tracker/?func=detail&aid=3530322&group_id=76834&atid=2257941") "Subdivision of skeletal system that consists of all the vertebra and associated skeletal elements and joints in the body[modified from VSAO].") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0000699") AnnotationAssertion( "AAO:0000734") AnnotationAssertion( "BTO:0000818") @@ -43209,7 +50205,7 @@ AnnotationAssertion(rdfs:label " EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -43329,11 +50325,12 @@ AnnotationAssertion( "galen:Back") AnnotationAssertion(rdfs:label "dorsum") SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (superior mesenteric vein) AnnotationAssertion(Annotation( "Wikipedia:Superior_mesenteric_vein") "In anatomy, the superior mesenteric vein (SMV) is a blood vessel that drains blood from the small intestine. At its termination behind the neck of the pancreas, the SMV combines with the splenic vein to form the hepatic portal vein. The SMV lies to the right of the similarly named artery, the superior mesenteric artery, which originates from the abdominal aorta. [WP,unvetted].") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0002783") AnnotationAssertion( "EHDAA2:0001951") AnnotationAssertion( "EHDAA:5414") @@ -43445,12 +50442,13 @@ AnnotationAssertion( "colon") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sigmoid colon) AnnotationAssertion(Annotation( "Wikipedia:Sigmoid_colon") "The part of the large intestine that is closest to the rectum and anus. It forms a loop that averages about 40 cm. in length, and normally lies within the pelvis, but on account of its freedom of movement it is liable to be displaced into the abdominal cavity.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0000645") AnnotationAssertion( "CALOHA:TS-2044") AnnotationAssertion( "EFO:0000846") @@ -43566,19 +50564,6 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (mesentery of small intestine) - -AnnotationAssertion(Annotation( "Wikipedia:Mesentery#Mesentery_.28proper.29") "The peritoneum responsible for connecting the jejunum and ileum (parts of the small intestine) to the back wall of the abdomen. Between the two sheets of peritoneum are blood vessels, lymph vessels, and nerves. This allows these parts of the small intestine to move relatively freely within the abdominopelvic cavity. The brain, however, cannot map sensation accurately, so sensation is usually referred to the midline, an example of referred pain[WP].") -AnnotationAssertion( "FMA:14643") -AnnotationAssertion( "MA:0001555") -AnnotationAssertion( "SCTID:245456008") -AnnotationAssertion( "Wikipedia:Mesentery#Mesentery_.28proper.29") -AnnotationAssertion(rdfs:label "mesentery of small intestine") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) - # Class: (portal lobule) AnnotationAssertion(Annotation( "MP:0008992") "The triangular region on the periphery of the liver lobules that contain a bile duct and a terminal branch of the hepatic artery and portal vein, and may also include a lymphatic vessel.") @@ -43631,6 +50616,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (common bile duct) AnnotationAssertion(Annotation( "MGI:csmith") Annotation( "MP:0009495") "The part of the biliary tree formed by the union of the cystic duct and the common hepatic duct.") +AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000303") AnnotationAssertion( "EHDAA:3981") AnnotationAssertion( "EMAPA:17201") @@ -43746,6 +50732,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (ovarian artery) AnnotationAssertion(Annotation( "OBOL:automatic") "An artery that supplies an ovary.") +AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18620") AnnotationAssertion( "FMA:14761") AnnotationAssertion( "MA:0002012") @@ -43761,6 +50748,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (hepatic artery) AnnotationAssertion(Annotation( "Wikipedia:Hepatic_artery_proper") Annotation( "https://orcid.org/0000-0002-6601-2165") "An artery that supplies the liver.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0004307") AnnotationAssertion( "EMAPA:17859") AnnotationAssertion( "FMA:14769") @@ -43780,6 +50768,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (splenic artery) AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") "An artery that supplies the spleen.") +AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19216") AnnotationAssertion( "FMA:14773") AnnotationAssertion( "GAID:510") @@ -43964,7 +50953,7 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (intestinal villus) @@ -43981,12 +50970,14 @@ AnnotationAssertion( "intestinal villus") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (inferior mesenteric vein) AnnotationAssertion(Annotation( "Wikipedia:Inferior_mesenteric_vein") "A blood vessel that drains blood from the large intestine that usually terminates when reaching the splenic vein, which goes on to form the portal vein with the superior mesenteric vein (SMV). Anatomical variations include the IMV draining into the confluence of the SMV and splenic vein and the IMV draining in the SMV. The IMV lies to the right of the similarly name artery, the inferior mesenteric artery, which originates from the abdominal aorta. [WP,unvetted].") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0002782") AnnotationAssertion( "EHDAA2:0000819") AnnotationAssertion( "EHDAA:8712") @@ -44045,6 +51036,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (anus) AnnotationAssertion(Annotation( "Wikipedia:Anus") Annotation( "ZFIN:curator") "Orifice at the opposite end of an animal's digestive tract from the mouth. Its function is to expel feces, unwanted semi-solid matter produced during digestion, which, depending on the type of animal, may be one or more of: matter which the animal cannot digest, such as bones; food material after all the nutrients have been extracted, for example cellulose or lignin; ingested matter which would be toxic if it remained in the digestive tract; and dead or excess gut bacteria and other endosymbionts.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0001680") AnnotationAssertion( "CALOHA:TS-2005") AnnotationAssertion( "EV:0100082") @@ -44098,6 +51090,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (pancreatic acinus) AnnotationAssertion(Annotation( "MP:0009145") "The secretory units of the exocrine pancreas, where fluid containing digestive enzymes is produced; consists of a group of secretory cells surrounding a luminal space that connects to the pancreatic duct.") +AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35651") AnnotationAssertion( "FMA:16011") AnnotationAssertion( "MA:0002417") @@ -44114,6 +51107,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (pancreas) AnnotationAssertion(Annotation( "GO:0031016") "An endoderm derived structure that produces precursors of digestive enzymes and blood glucose regulating hormones[GO].") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0010112") AnnotationAssertion( "BTO:0000988") AnnotationAssertion( "CALOHA:TS-0736") @@ -44139,13 +51133,14 @@ AnnotationAssertion( "pancreas") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (trabecula of spleen) AnnotationAssertion(Annotation( "OBOL:automatic") "A trabecula that is part of a spleen.") +AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35808") AnnotationAssertion( "FMA:16027") AnnotationAssertion( "MA:0000758") @@ -44230,6 +51225,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (portal triad) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8") Annotation( "MGI:csmith") Annotation( "MP:0008993") Annotation( "http://orcid.org/0000-0002-6601-2165") "A multi-organ-part structure that consists of three vessels of the portal lobule including the bile duct, a terminal branch of the hepatic artery and portal vein, and may also include a lymphatic vessel.") +AnnotationAssertion( ) AnnotationAssertion( "FMA:17523") AnnotationAssertion( "MA:0002499") AnnotationAssertion( "NCIT:C33342") @@ -44269,6 +51265,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (hepatic sinusoid) AnnotationAssertion(Annotation( "Wikipedia:Hepatic_sinusoid") Annotation( "ZFIN:curator") "Wide thin-walled blood vessels in the liver. In mammals they have neither veinous or arterial markers.") +AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000999") AnnotationAssertion( "EMAPA:17365") AnnotationAssertion( "FMA:17543") @@ -44293,6 +51290,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (intralobular bile duct) AnnotationAssertion(Annotation( "MGI:csmith") Annotation( "MP:0009499") "The tubules located between the bile canaliculi and interlobular bile ducts near the outer edge of a classic liver lobule.") +AnnotationAssertion( ) AnnotationAssertion( "FMA:17545") AnnotationAssertion( "MA:0002669") AnnotationAssertion( "NCIT:C32255") @@ -44327,6 +51325,32 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (cerebrospinal fluid) + +AnnotationAssertion(Annotation( "Wikipedia:Cerebrospinal_fluid") "A clear, colorless, bodily fluid, that occupies the subarachnoid space and the ventricular system around and inside the brain and spinal cord.") +AnnotationAssertion( "BIRNLEX:1798") +AnnotationAssertion( "BTO:0000237") +AnnotationAssertion( "CALOHA:TS-0130") +AnnotationAssertion( "EFO:0000329") +AnnotationAssertion( "EHDAA2:0004441") +AnnotationAssertion( "ENVO:02000029") +AnnotationAssertion( "EV:0100311") +AnnotationAssertion( "FMA:20935") +AnnotationAssertion( "GAID:1181") +AnnotationAssertion( "MA:0002503") +AnnotationAssertion( "MAT:0000499") +AnnotationAssertion( "MESH:D002555") +AnnotationAssertion( "NCIT:C12692") +AnnotationAssertion( "TAO:0002184") +AnnotationAssertion( "VHOG:0001278") +AnnotationAssertion( "Wikipedia:Cerebrospinal_fluid") +AnnotationAssertion( "ZFA:0001626") +AnnotationAssertion(rdfs:label "cerebrospinal fluid") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (parietal peritoneum) AnnotationAssertion(Annotation( "Wikipedia:Peritoneum#Types") Annotation( "http://orcid.org/0000-0002-6601-2165") "The outer layer of peritoneum that is attached to the abdominal and pelvic walls.") @@ -44344,6 +51368,33 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (primary motor cortex) + +AnnotationAssertion(Annotation( "NLX:143555") "The part of the cerebral cortex that receives projections from the motor thalamus and which projects to motor neurons in the brainstem and spinal cord. The motor cortex corresponds to Brodmann's area 4 (MM). The primary motor cortex, or M1, is located on the precentral gyrus and on the anterior paracentral lobule on the medial surface of the brain. Of the three motor cortex areas, stimulation of the primary motor cortex requires the least amount of electrical current to elicit a movement. http://neuroscience.uth.tmc.edu/s3/chapter03.html.") +AnnotationAssertion( ) +AnnotationAssertion( "BAMS:M1") +AnnotationAssertion( "BAMS:MO") +AnnotationAssertion( "BAMS:MOp") +AnnotationAssertion( "BM:Tel-Cx-M1") +AnnotationAssertion( "BTO:0004348") +AnnotationAssertion( "DHBA:10162") +AnnotationAssertion( "EFO:0002472") +AnnotationAssertion( "EMAPA:35704") +AnnotationAssertion( "FMA:224854") +AnnotationAssertion( "MA:0000907") +AnnotationAssertion( "MBA:985") +AnnotationAssertion( "MESH:D009044") +AnnotationAssertion( "NCIT:C97339") +AnnotationAssertion( "NLX:143555") +AnnotationAssertion( "SCTID:11931008") +AnnotationAssertion( "Wikipedia:Primary_motor_cortex") +AnnotationAssertion( "neuronames:1910") +AnnotationAssertion(rdfs:label "primary motor cortex") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (skin of abdomen) AnnotationAssertion(Annotation( "OBOL:automatic") "A zone of skin that is part of an abdomen [Automatically generated definition].") @@ -44460,7 +51511,6 @@ AnnotationAssertion( "galen:Face") AnnotationAssertion(rdfs:label "face") SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skin of lip) @@ -44472,7 +51522,7 @@ AnnotationAssertion( "SCTID:244092005") AnnotationAssertion(rdfs:label "skin of lip") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (bone element) @@ -44505,7 +51555,7 @@ AnnotationAssertion( "bone element") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) DisjointClasses( ) @@ -44531,6 +51581,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (ascending aorta) AnnotationAssertion(Annotation( "GO:0035905") Annotation( "Wikipedia:Ascending_aorta") "The ascending aorta is the portion of the aorta in a two-pass circulatory system that lies between the heart and the arch of aorta[GO]. A portion of the aorta commencing at the upper part of the base of the left ventricle, on a level with the lower border of the third costal cartilage behind the left half of the sternum; it passes obliquely upward, forward, and to the right, in the direction of the heart's axis, as high as the upper border of the second right costal cartilage, describing a slight curve in its course, and being situated, about 6 cm behind the posterior surface of the sternum. The total length is about 5 cm in length [Wikipedia].") +AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000147") AnnotationAssertion( "EHDAA:9828") AnnotationAssertion( "EMAPA:17014") @@ -44550,6 +51601,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (arch of aorta) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8") Annotation( "MP:0004113") "The convex portion of the aorta between the ascending and descending parts of the aorta; branches from it include the brachiocephalic trunk, the left common carotid artery, and the left subclavian artery; the brachiocephalic trunk further splits to form the right subclavian artery and the right common carotid artery.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0000157") AnnotationAssertion( "EFO:0002526") AnnotationAssertion( "EHDAA2:0000132") @@ -44572,6 +51624,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (descending aorta) AnnotationAssertion(Annotation( "GO:0035906") Annotation( "Wikipedia:Descending_aorta") "The descending aorta is the portion of the aorta in a two-pass circulatory system from the arch of aorta to the point where it divides into the common iliac arteries[GO]. The descending aorta is part of the aorta, the largest artery in the body. The descending aorta is the part of the aorta beginning at the aortic arch that runs down through the chest and abdomen. The descending aorta is divided into two portions, the thoracic and abdominal, in correspondence with the two great cavities of the trunk in which it is situated. Within the abdomen, the descending aorta branches into the two common iliac arteries which serve the legs. [WP,unvetted].") +AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18606") AnnotationAssertion( "FMA:3784") AnnotationAssertion( "MA:0002571") @@ -44608,6 +51661,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (abdominal aorta) AnnotationAssertion(Annotation( "BTO:0002976") Annotation( "Wikipedia:Abdominal_aorta") "Abdominal part of aorta: the distal part of the descending aorta, which is the continuation of the thoracic part and gives rise to the inferior phrenic, lumbar, median sacral, superior and inferior mesenteric, middle suprarenal, renal, and testicular or ovarian arteries, and celiac trunk[BTO]. The abdominal aorta is the largest artery in the abdominal cavity. As part of the aorta, it is a direct continuation of descending aorta(of the thorax). [WP,unvetted].") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0002976") AnnotationAssertion( "EFO:0002524") AnnotationAssertion( "EMAPA:17856") @@ -44629,6 +51683,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (brachiocephalic artery) AnnotationAssertion(Annotation( "MGI:csmith") Annotation( "MP:0010663") "The short first aortic arch branch and divides into the right subclavian artery and the right common carotid artery.") +AnnotationAssertion( ) AnnotationAssertion( "EFO:0002550") AnnotationAssertion( "EHDAA2:0000835") AnnotationAssertion( "EMAPA:17615") @@ -44649,6 +51704,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (common carotid artery plus branches) AnnotationAssertion(Annotation( "Wikipedia:Common_carotid_artery") "A bilaterally paired branched artery that originates from the aortic arches and divides into and includes as parts the internal and external carotid arteries[cjm].") +AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-0116") AnnotationAssertion( "EHDAA2:0000217") AnnotationAssertion( "EHDAA:7331") @@ -44667,9 +51723,55 @@ SubClassOf( ObjectSomeValuesFrom( SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (right common carotid artery plus branches) + +AnnotationAssertion(Annotation( "UBERON:cjm") "The rightmost of the two common carotid arteries, originating from in the neck from the brachiocephalic trunk.") +AnnotationAssertion( ) +AnnotationAssertion( "EMAPA:35749") +AnnotationAssertion( "FMA:3941") +AnnotationAssertion( "MA:0001928") +AnnotationAssertion( "NCIT:C33473") +AnnotationAssertion( "SCTID:362042003") +AnnotationAssertion( "Wikipedia:Right_common_carotid_artery") +AnnotationAssertion(rdfs:label "right common carotid artery plus branches") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (internal carotid artery) + +AnnotationAssertion(Annotation( "MGI:anna") "A terminal branch of the left or right common carotid artery which supplies oxygenated blood to the brain and eyes[MP].") +AnnotationAssertion( ) +AnnotationAssertion( "AAO:0010219") +AnnotationAssertion( "AAO:0011054") +AnnotationAssertion( "BTO:0004697") +AnnotationAssertion( "EFO:0001952") +AnnotationAssertion( "EHDAA2:0000873") +AnnotationAssertion( "EHDAA:408") +AnnotationAssertion( "EHDAA:6389") +AnnotationAssertion( "EMAPA:16328") +AnnotationAssertion( "FMA:3947") +AnnotationAssertion( "GAID:481") +AnnotationAssertion( "MA:0001930") +AnnotationAssertion( "MESH:D002343") +AnnotationAssertion( "NCIT:C32836") +AnnotationAssertion( "SCTID:362045001") +AnnotationAssertion( "TAO:0005081") +AnnotationAssertion( "VHOG:0000267") +AnnotationAssertion( "Wikipedia:Internal_carotid_artery") +AnnotationAssertion( "XAO:0000366") +AnnotationAssertion( "ZFA:0005081") +AnnotationAssertion(rdfs:label "internal carotid artery") +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (subclavian artery) AnnotationAssertion(Annotation( "ISBN:0073040584") Annotation( "https://orcid.org/0000-0002-6601-2165") "One of two laterally paired arteries that supplies the pectoral appendages, usually branching from the dorsal aorta.") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0010232") AnnotationAssertion( "EHDAA2:0001933") AnnotationAssertion( "EHDAA:4357") @@ -44695,6 +51797,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (right subclavian artery) AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") "The subclavian artery that supplies the right pectoral appendage.") +AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0004514") AnnotationAssertion( "FMA:3953") AnnotationAssertion( "MA:0002047") @@ -44708,9 +51811,23 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (left common carotid artery plus branches) + +AnnotationAssertion(Annotation( "UBERON:cjm") "The leftmost of the two common carotid arteries, originating from the aortic arch in the thorax.") +AnnotationAssertion( ) +AnnotationAssertion( "EMAPA:35491") +AnnotationAssertion( "FMA:4058") +AnnotationAssertion( "MA:0001927") +AnnotationAssertion( "NCIT:C32956") +AnnotationAssertion( "SCTID:362043008") +AnnotationAssertion( "Wikipedia:Left_common_carotid_artery") +AnnotationAssertion(rdfs:label "left common carotid artery plus branches") +SubClassOf( ) + # Class: (digestive tract) AnnotationAssertion(Annotation( "Wikipedia:Talk:Human_gastrointestinal_tract") Annotation( "https://github.com/geneontology/go-ontology/issues/7549") "A tube extending from the mouth to the anus.") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0010023") AnnotationAssertion( "BILA:0000083") AnnotationAssertion( "BTO:0000511") @@ -44730,13 +51847,29 @@ AnnotationAssertion( "digestive tract") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (upper respiratory tract) + +AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") "The segment of the respiratory tract that starts proximally with the nose and ends distally with the cricoid cartilage, before continuing to the trachea.") +AnnotationAssertion( ) +AnnotationAssertion( "EHDAA2:0002136") +AnnotationAssertion( "EMAPA:17669") +AnnotationAssertion( "FMA:45661") +AnnotationAssertion( "MA:0000442") +AnnotationAssertion( "SCTID:361381009") +AnnotationAssertion( "VHOG:0000406") +AnnotationAssertion( "Wikipedia:Upper_respiratory_tract") +AnnotationAssertion(rdfs:label "upper respiratory tract") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (lower respiratory tract) AnnotationAssertion(Annotation( "Wikipedia:Lower_respiratory_tract") Annotation( "http://orcid.org/0000-0002-6601-2165") "The segment of the respiratory tract that starts proximally with the trachea and includes all distal structures including the lungs[WP,modified].") +AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001036") AnnotationAssertion( "EMAPA:16738") AnnotationAssertion( "FMA:45662") @@ -44748,9 +51881,50 @@ AnnotationAssertion(rdfs:label " SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (muscle of larynx) + +AnnotationAssertion(Annotation( "MP:0002263") "The muscles associated with the larynx.") +AnnotationAssertion( ) +AnnotationAssertion( "BTO:0001626") +AnnotationAssertion( "EMAPA:35473") +AnnotationAssertion( "FMA:46562") +AnnotationAssertion( "GAID:144") +AnnotationAssertion( "MA:0001768") +AnnotationAssertion( "MESH:D007821") +AnnotationAssertion( "NCIT:C32934") +AnnotationAssertion( "SCTID:181744001") +AnnotationAssertion( "Wikipedia:Muscles_of_larynx") +AnnotationAssertion(rdfs:label "muscle of larynx") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (facial muscle) + +AnnotationAssertion(Annotation( "FEED:rd") "A muscle innervated by a facial nerve.") +AnnotationAssertion( "FMA:46751") +AnnotationAssertion( "GAID:143") +AnnotationAssertion( "MA:0003160") +AnnotationAssertion( "MESH:D005152") +AnnotationAssertion( "MFMO:0000005") +AnnotationAssertion( "NCIT:C13073") +AnnotationAssertion( "SCTID:25903009") +AnnotationAssertion( "Wikipedia:Facial_muscles") +AnnotationAssertion( "XAO:0001013") +AnnotationAssertion(rdfs:label "facial muscle") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (left subclavian artery) AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") "The subclavian artery that supplies the left pectoral appendage.") +AnnotationAssertion( ) AnnotationAssertion( "FMA:4694") AnnotationAssertion( "MA:0002046") AnnotationAssertion( "NCIT:C32972") @@ -44766,6 +51940,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (anterior vena cava) AnnotationAssertion(Annotation( "Wikipedia:Superior_vena_cava") Annotation( "http://orcid.org/0000-0002-6601-2165") "A vein that carries deoxygenated blood from the upper half of the body into the right atrium of the heart.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0002683") AnnotationAssertion( "EHDAA2:0001962") AnnotationAssertion( "EHDAA:8726") @@ -44788,6 +51963,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (internal jugular vein) AnnotationAssertion(Annotation( "Wikipedia:Internal_jugular_vein") "One of two jugular veins that collect the blood from the brain, the superficial parts of the face, and the neck. [WP,unvetted].") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0010236") AnnotationAssertion( "EHDAA2:0000877") AnnotationAssertion( "EHDAA:5407") @@ -44809,6 +51985,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (bronchial vein) AnnotationAssertion(Annotation( "Wikipedia:Bronchial_veins") "The bronchial veins are small vessels that return blood from the larger bronchi and structures at the roots of the lungs. The right side drains into the azygos vein, while the left side drains into the left superior intercostal vein or the accessory hemiazygos vein. The bronchial veins are counterparts to the bronchial arteries. The veins, however, do not return all of the blood supplied by the arteries; much of the blood that is carried in the bronchial arteries is returned to the heart via the pulmonary veins. [WP,unvetted].") +AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36284") AnnotationAssertion( "FMA:4749") AnnotationAssertion( "MA:0002088") @@ -44820,9 +51997,24 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (venous plexus) + +AnnotationAssertion(Annotation( "Wikipedia:Venous_plexus") "A congregation of multiple veins.") +AnnotationAssertion( "EMAPA:36327") +AnnotationAssertion( "FMA:4767") +AnnotationAssertion( "MA:0000069") +AnnotationAssertion( "SCTID:322151008") +AnnotationAssertion( "Wikipedia:Venous_plexus") +AnnotationAssertion(rdfs:label "venous plexus") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (ciliary muscle) AnnotationAssertion(Annotation( "Wikipedia:Ciliary_muscle") "The ciliary muscle is a ring of smooth muscle in the middle layer of the eye that controls the eye's accommodation for viewing objects at varying distances and regulates the flow of aqueous humour through Schlemm's canal. [WP,unvetted].") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0000654") AnnotationAssertion( "EMAPA:35240") AnnotationAssertion( "FMA:49151") @@ -44870,6 +52062,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (dilatator pupillae) AnnotationAssertion(Annotation( "Wikipedia:Iris_dilator_muscle") "A smooth muscle of the eye, running radially in the iris that functions as a dilator. [WP,unvetted].") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0001371") AnnotationAssertion( "EMAPA:35286") AnnotationAssertion( "FMA:49158") @@ -44884,9 +52077,28 @@ SubClassOf( ObjectSomeValuesFrom( SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (lingual artery) + +AnnotationAssertion(Annotation( "Wikipedia:Lingual_artery") "The lingual artery arises from the external carotid between the superior thyroid and facial artery[WP].") +AnnotationAssertion( ) +AnnotationAssertion( "AAO:0010492") +AnnotationAssertion( "EMAPA:36324") +AnnotationAssertion( "FMA:49526") +AnnotationAssertion( "MA:0001992") +AnnotationAssertion( "NCIT:C52961") +AnnotationAssertion( "SCTID:181327002") +AnnotationAssertion( "Wikipedia:Lingual_artery") +AnnotationAssertion(rdfs:label "lingual artery") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (facial artery) AnnotationAssertion(Annotation( "Wikipedia:Facial_artery") "A branch of the external carotid artery that supplies structures of the face. [WP,unvetted].") +AnnotationAssertion( ) AnnotationAssertion( "EMAPA:19213") AnnotationAssertion( "FMA:49549") AnnotationAssertion( "MA:0001950") @@ -44898,6 +52110,50 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (maxillary artery) + +AnnotationAssertion(Annotation( "Wikipedia:Maxillary_artery") "An artery that supplies deep structures of the face. It comes just out behind the neck of the mandible. [WP,unvetted].") +AnnotationAssertion( ) +AnnotationAssertion( "EHDAA2:0001069") +AnnotationAssertion( "EHDAA:7357") +AnnotationAssertion( "EMAPA:17311") +AnnotationAssertion( "FMA:49675") +AnnotationAssertion( "GAID:498") +AnnotationAssertion( "MA:0001919") +AnnotationAssertion( "MESH:D008438") +AnnotationAssertion( "NCIT:C34205") +AnnotationAssertion( "SCTID:181326006") +AnnotationAssertion( "Wikipedia:Maxillary_artery") +AnnotationAssertion(rdfs:label "maxillary artery") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (posterior communicating artery) + +AnnotationAssertion(Annotation( "Wikipedia:Posterior_communicating_artery") "One of a pair of right-sided and left-sided blood vessels in the circle of Willis. It connects the three cerebral arteries of the same side. Anteriorly, it is one portion of the terminal trifurcation of the internal carotid artery. The anterior cerebral artery and the middle cerebral artery are the other two branches of the trifurcation. Posteriorly, it communicates with the posterior cerebral artery.") +AnnotationAssertion( ) +AnnotationAssertion( "EHDAA2:0004518") +AnnotationAssertion( "EHDAA:3352") +AnnotationAssertion( "EMAPA:18600") +AnnotationAssertion( "FMA:50084") +AnnotationAssertion( "MA:0002023") +AnnotationAssertion( "NCIT:C33357") +AnnotationAssertion( "RETIRED_EHDAA2:0001487") +AnnotationAssertion( "SCTID:181314001") +AnnotationAssertion( "TAO:0005001") +AnnotationAssertion( "Wikipedia:Posterior_communicating_artery") +AnnotationAssertion( "ZFA:0005001") +AnnotationAssertion(rdfs:label "posterior communicating artery") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (muscle organ) AnnotationAssertion(Annotation( "GO:0007517") "Organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work[GO].") @@ -44981,6 +52237,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (hepatic portal vein) AnnotationAssertion(Annotation( "ISBN:0073040584") Annotation( "Wikipedia:Hepatic_portal_vein") Annotation( "http://sourceforge.net/tracker/?func=detail&aid=3091300&group_id=76834&atid=1205376") "A portal vein that transports nutrients from the digestive tract to the liver[Kardong].") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0010214") AnnotationAssertion( "FMA:50735") AnnotationAssertion( "MA:0002132") @@ -44997,6 +52254,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (celiac artery) AnnotationAssertion(Annotation( "Wikipedia:Celiac_artery") "The first major branch of the abdominal aorta.") +AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0004519") AnnotationAssertion( "EMAPA:35202") AnnotationAssertion( "FMA:50737") @@ -45017,6 +52275,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (trigeminal nerve) AnnotationAssertion(Annotation( "ISBN:0471209627") Annotation( "Wikipedia:Trigeminal_nerve") "Cranial nerve that has three branches - the ophthalmic (supplying the skin of the nose and upper jaw), the maxillary and the mandibular (supplying the lower jaw).") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0010470") AnnotationAssertion( "BAMS:5n") AnnotationAssertion( "BAMS:Vn") @@ -45050,9 +52309,79 @@ SubClassOf( ObjectSomeValuesFrom( SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (facial nerve) + +AnnotationAssertion(Annotation( "ISBN:0471209627") Annotation( "Wikipedia:Facial_nerve") "Cranial nerve that branches into the supraorbital (supplying the skin of the eye region and the lateral line organs here), the palatine (to the roof of the buccal cavity), and the hyomandibular (dividing into the jugular and mental branches).") +AnnotationAssertion( ) +AnnotationAssertion( "AAO:0010472") +AnnotationAssertion( "BAMS:7n") +AnnotationAssertion( "BAMS:VIIn") +AnnotationAssertion( "BAMS:Viin") +AnnotationAssertion( "BAMS:nVII") +AnnotationAssertion( "BIRNLEX:827") +AnnotationAssertion( "BM:Pons-VIIN") +AnnotationAssertion( "EHDAA2:0000489") +AnnotationAssertion( "EHDAA:3729") +AnnotationAssertion( "EMAPA:17796") +AnnotationAssertion( "FMA:50868") +AnnotationAssertion( "GAID:719") +AnnotationAssertion( "HBA:9328") +AnnotationAssertion( "MA:0001091") +AnnotationAssertion( "MBA:798") +AnnotationAssertion( "MESH:D005154") +AnnotationAssertion( "NCIT:C12714") +AnnotationAssertion( "SCTID:362460007") +AnnotationAssertion( "TAO:0000664") +AnnotationAssertion( "VHOG:0000706") +AnnotationAssertion( "Wikipedia:Facial_nerve") +AnnotationAssertion( "XAO:0003094") +AnnotationAssertion( "ZFA:0000664") +AnnotationAssertion(rdfs:label "facial nerve") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (glossopharyngeal nerve) + +AnnotationAssertion(Annotation( "ISBN:0471209627") Annotation( "Wikipedia:Glossopharyngeal_nerve") "Cranial nerve that branches into the ramus communicans (to the skin), the pretrematic (to the walls of the pharynx and mouth, viscero-sensory fibers), and the larval post-trematic branch (lost in the adult).") +AnnotationAssertion( ) +AnnotationAssertion( "AAO:0010474") +AnnotationAssertion( "BAMS:9n") +AnnotationAssertion( "BAMS:IXn") +AnnotationAssertion( "BIRNLEX:899") +AnnotationAssertion( "BTO:0004979") +AnnotationAssertion( "EHDAA2:0000709") +AnnotationAssertion( "EHDAA:3733") +AnnotationAssertion( "EMAPA:17268") +AnnotationAssertion( "FMA:50870") +AnnotationAssertion( "GAID:827") +AnnotationAssertion( "MA:0001093") +AnnotationAssertion( "MBA:808") +AnnotationAssertion( "MESH:D005930") +AnnotationAssertion( "NCIT:C12723") +AnnotationAssertion( "SCTID:362465002") +AnnotationAssertion( "TAO:0000668") +AnnotationAssertion( "VHOG:0000701") +AnnotationAssertion( "Wikipedia:Glossopharyngeal_nerve") +AnnotationAssertion( "XAO:0003096") +AnnotationAssertion( "ZFA:0000668") +AnnotationAssertion(rdfs:label "glossopharyngeal nerve") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (right pulmonary artery) AnnotationAssertion(Annotation( "UBERON:cjm") "The pulmonary artery that supplies the right lung.") +AnnotationAssertion( ) AnnotationAssertion( "FMA:50872") AnnotationAssertion( "MA:0002500") AnnotationAssertion( "NCIT:C33489") @@ -45068,6 +52397,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (left pulmonary artery) AnnotationAssertion(Annotation( "UBERON:cjm") "The pulmonary artery that supplies the left lung.") +AnnotationAssertion( ) AnnotationAssertion( "FMA:50873") AnnotationAssertion( "MA:0002032") AnnotationAssertion( "NCIT:C32971") @@ -45083,6 +52413,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (facial vein) AnnotationAssertion(Annotation( "Wikipedia:Facial_vein") "The anterior facial vein (facial vein) commences at the side of the root of the nose, and is a direct continuation of the angular vein where it also receives a small nasal branch. It lies behind the facial artery and follows a less tortuous course. It receives blood from the external palatine vein before it either joins the anterior branch of the retromandibular vein to form the common facial vein, or drains directly into the internal jugular vein. [WP,unvetted].") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0010513") AnnotationAssertion( "EMAPA:19220") AnnotationAssertion( "FMA:50874") @@ -45096,6 +52427,37 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (cerebral vein) + +AnnotationAssertion(Annotation( "Wikipedia:Cerebral_veins") "The cerebral veins are divisible into external and internal groups according to the outer surfaces or the inner parts of the hemispheres they drain into. The external veins are the superior cerebral veins, inferior cerebral veins, and middle cerebral vein. [WP,unvetted].") +AnnotationAssertion( "FMA:50981") +AnnotationAssertion( "GAID:530") +AnnotationAssertion( "MA:0002096") +AnnotationAssertion( "MESH:D002550") +AnnotationAssertion( "NCIT:C53037") +AnnotationAssertion( "SCTID:244392000") +AnnotationAssertion( "Wikipedia:Cerebral_veins") +AnnotationAssertion( "XAO:0004160") +AnnotationAssertion(rdfs:label "cerebral vein") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (cerebellar vein) + +AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") "A vein that drains the cerebellum.") +AnnotationAssertion( "FMA:51227") +AnnotationAssertion( "MA:0002093") +AnnotationAssertion( "NCIT:C53032") +AnnotationAssertion( "SCTID:40693009") +AnnotationAssertion( "Wikipedia:Cerebellar_veins") +AnnotationAssertion(rdfs:label "cerebellar vein") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (trigeminal ganglion) AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") Annotation( "http://www.ncbi.nlm.nih.gov/books/NBK53171") Annotation( "https://github.com/obophenotype/uberon/issues/693") "The cranial ganglion that is associated with and extends fibers into the trigeminal nerve.") @@ -45132,6 +52494,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (occipital bone) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8") Annotation( "MP:0005269") "The bone at the lower, posterior part of the skull.") +AnnotationAssertion( ) AnnotationAssertion( "EMAPA:25112") AnnotationAssertion( "FMA:52735") AnnotationAssertion( "GAID:227") @@ -45146,13 +52509,14 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (sphenoid bone) AnnotationAssertion(Annotation( "Wikipedia:Sphenoid_bone") "An unpaired bone situated at the base of the skull in front of the temporal bone and basilar part of the occipital bone. The sphenoid bone is one of the seven bones that articulate to form the orbit. Its shape somewhat resembles that of a butterfly or bat with its wings extended.") +AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-2343") AnnotationAssertion( "EMAPA:18340") AnnotationAssertion( "FMA:52736") @@ -45173,9 +52537,30 @@ SubClassOf( ObjectSomeValuesFrom( SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (temporal bone) + +AnnotationAssertion(Annotation( "ISBN:0-683-40008-8") Annotation( "MP:0005272") "The large, irregular bone located at the base and side of the skull; consists of three parts at birth: squamous, tympanic, and petrous.") +AnnotationAssertion( ) +AnnotationAssertion( "EHDAA:6035") +AnnotationAssertion( "EMAPA:17682") +AnnotationAssertion( "FMA:52737") +AnnotationAssertion( "GAID:232") +AnnotationAssertion( "MA:0001476") +AnnotationAssertion( "MESH:D013701") +AnnotationAssertion( "NCIT:C12797") +AnnotationAssertion( "SCTID:181795004") +AnnotationAssertion( "VHOG:0000800") +AnnotationAssertion( "Wikipedia:Temporal_bone") +AnnotationAssertion(rdfs:label "temporal bone") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (ethmoid bone) AnnotationAssertion(Annotation( "Wikipedia:Ethmoid_bone") "A bone in the skull that separates the nasal cavity from the brain. As such, it is located at the roof of the nose, between the two orbits. The cubical bone is lightweight due to a spongy construction. The ethmoid bone is one of the bones that makes up the orbit of the eye[WP].") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0004140") AnnotationAssertion( "EMAPA:19018") AnnotationAssertion( "FMA:52740") @@ -45195,6 +52580,37 @@ SubClassOf( ObjectSomeValuesFrom( SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (ear) + +AnnotationAssertion(Annotation( "GO:0042471") Annotation( "Wikipedia:Ear") "Sense organ in vertebrates that is specialized for the detection of sound, and the maintenance of balance. Includes the outer ear and middle ear, which collect and transmit sound waves; and the inner ear, which contains the organs of balance and (except in fish) hearing. Also includes the pinna, the visible part of the outer ear, present in some mammals.") +AnnotationAssertion( "AAO:0011014") +AnnotationAssertion( "BIRNLEX:1062") +AnnotationAssertion( "BTO:0000368") +AnnotationAssertion( "CALOHA:TS-1165") +AnnotationAssertion( "EFO:0000826") +AnnotationAssertion( "EHDAA2:0000423") +AnnotationAssertion( "EHDAA:502") +AnnotationAssertion( "EMAPA:16193") +AnnotationAssertion( "EV:0100353") +AnnotationAssertion( "FMA:52780") +AnnotationAssertion( "GAID:62") +AnnotationAssertion( "MA:0000236") +AnnotationAssertion( "MAT:0000138") +AnnotationAssertion( "MESH:D004423") +AnnotationAssertion( "MIAA:0000138") +AnnotationAssertion( "NCIT:C12394") +AnnotationAssertion( "SCTID:1910005") +AnnotationAssertion( "VHOG:0000330") +AnnotationAssertion( "Wikipedia:Ear") +AnnotationAssertion( "XAO:0000189") +AnnotationAssertion( "galen:Ear") +AnnotationAssertion(rdfs:label "ear") +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (orbit of skull) AnnotationAssertion(Annotation( "TAO:0001410") Annotation( "Wikipedia:Orbit_(anatomy)") Annotation( "http://orcid.org/0000-0002-6601-2165") "Subdivision of skeleton that is an anterolateral part of the cranium and structurally supports the eye. Includes bones formed and located in sclerotic layer of eyeball.") @@ -45218,9 +52634,62 @@ SubClassOf( ObjectSomeValuesFrom( SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (geniculate ganglion) + +AnnotationAssertion(Annotation( "ISBN:0-683-40008-8") Annotation( "MP:0001082") "The group of sensory neuron cell bodies associated with the facial nerve (seventh cranial nerve).") +AnnotationAssertion( ) +AnnotationAssertion( "BAMS:GgVII") +AnnotationAssertion( "EFO:0003669") +AnnotationAssertion( "EHDAA2:0000491") +AnnotationAssertion( "EHDAA2:0004623") +AnnotationAssertion( "EHDAA:5567") +AnnotationAssertion( "EHDAA:6644") +AnnotationAssertion( "EMAPA:17569") +AnnotationAssertion( "FMA:53414") +AnnotationAssertion( "GAID:718") +AnnotationAssertion( "MA:0001076") +AnnotationAssertion( "MESH:D005830") +AnnotationAssertion( "NCIT:C12721") +AnnotationAssertion( "SCTID:279076005") +AnnotationAssertion( "TAO:0001291") +AnnotationAssertion( "VHOG:0000707") +AnnotationAssertion( "Wikipedia:Geniculate_ganglion") +AnnotationAssertion( "ZFA:0001291") +AnnotationAssertion( "neuronames:1535") +AnnotationAssertion(rdfs:label "geniculate ganglion") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (glossopharyngeal ganglion) + +AnnotationAssertion(Annotation( "MP:0001096") "The group of neuron cell bodies associated with the ninth cranial nerve.") +AnnotationAssertion( ) +AnnotationAssertion( "EHDAA2:0000710") +AnnotationAssertion( "EHDAA:2838") +AnnotationAssertion( "EMAPA:16795") +AnnotationAssertion( "FMA:53471") +AnnotationAssertion( "MA:0001077") +AnnotationAssertion( "SCTID:244451008") +AnnotationAssertion( "TAO:0001301") +AnnotationAssertion( "VHOG:0000702") +AnnotationAssertion( "ZFA:0001301") +AnnotationAssertion(rdfs:label "glossopharyngeal ganglion") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (neurocranium) AnnotationAssertion(Annotation( "PMID:11523816") Annotation( "TAO:MAH") Annotation( "Wikipedia:Neuroranium") Annotation( "ZFA:0001580") "Subdivision of skeletal system that surrounds and protects the brain. Includes the skull base, sensory capsules and the central part of the skull roof.") +AnnotationAssertion( ) AnnotationAssertion( "FMA:53672") AnnotationAssertion( "MA:0000317") AnnotationAssertion( "SCTID:361731002") @@ -45235,6 +52704,29 @@ SubClassOf( ObjectSomeValuesFrom( SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (nasal cavity) + +AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") "An anatomical cavity that is part of the olfactory apparatus. This includes the space bounded anteriorly by the nares and posteriorly by the choanae, when these structures are present.") +AnnotationAssertion( "AAO:0000314") +AnnotationAssertion( "BTO:0002096") +AnnotationAssertion( "EHDAA2:0001226") +AnnotationAssertion( "EHDAA:6801") +AnnotationAssertion( "EMAPA:17604") +AnnotationAssertion( "FMA:54378") +AnnotationAssertion( "GAID:350") +AnnotationAssertion( "MA:0000284") +AnnotationAssertion( "MESH:D009296") +AnnotationAssertion( "NCIT:C12424") +AnnotationAssertion( "SCTID:263481003") +AnnotationAssertion( "TAO:0000130") +AnnotationAssertion( "VHOG:0000271") +AnnotationAssertion( "Wikipedia:Nasal_cavity") +AnnotationAssertion( "ZFA:0000130") +AnnotationAssertion(rdfs:label "nasal cavity") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (jaw skeleton) AnnotationAssertion(Annotation( "Wikipedia:Jaw") Annotation( "https://orcid.org/0000-0002-6601-2165") "Subdivision of skeleton which includes upper and lower jaw skeletons.") @@ -45258,7 +52750,7 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -45311,6 +52803,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (cranial ganglion) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8") Annotation( "MGI:csmith") Annotation( "MP:0001081") Annotation( "PMID:9362461") "The groups of nerve cell bodies associated with the twelve cranial nerves.") +AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:2597") AnnotationAssertion( "BTO:0000106") AnnotationAssertion( "EFO:0000902") @@ -45332,6 +52825,85 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (tongue) + +AnnotationAssertion(Annotation( "FEED:rd") Annotation( "https://github.com/obophenotype/uberon/issues/256") "A muscular organ in the floor of the mouth.") +AnnotationAssertion( "AAO:0010360") +AnnotationAssertion( "BTO:0001385") +AnnotationAssertion( "CALOHA:TS-1050") +AnnotationAssertion( "EFO:0000833") +AnnotationAssertion( "EHDAA2:0002062") +AnnotationAssertion( "EHDAA:9144") +AnnotationAssertion( "EMAPA:17185") +AnnotationAssertion( "EV:0100058") +AnnotationAssertion( "FMA:54640") +AnnotationAssertion( "GAID:816") +AnnotationAssertion( "MA:0000347") +AnnotationAssertion( "MAT:0000040") +AnnotationAssertion( "MESH:D014059") +AnnotationAssertion( "MIAA:0000040") +AnnotationAssertion( "NCIT:C12422") +AnnotationAssertion( "SCTID:181226008") +AnnotationAssertion( "TAO:0005333") +AnnotationAssertion( "VHOG:0000419") +AnnotationAssertion( "Wikipedia:Tongue") +AnnotationAssertion( "XAO:0000446") +AnnotationAssertion( "ZFA:0005333") +AnnotationAssertion(rdfs:label "tongue") +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (papilla of tongue) + +AnnotationAssertion( "BIRNLEX:4102") +AnnotationAssertion( "EMAPA:32777") +AnnotationAssertion( "FMA:54819") +AnnotationAssertion( "MA:0001593") +AnnotationAssertion( "NCIT:C33258") +AnnotationAssertion( "SCTID:368728006") +AnnotationAssertion(rdfs:label "papilla of tongue") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (taste bud) + +AnnotationAssertion(Annotation( "http://periowiki.wikispot.org/Taste_bud_histology") "A specialized receptor organ that is a collection of cells spanning the gustatory epithelium.") +AnnotationAssertion( "AAO:0010573") +AnnotationAssertion( "BIRNLEX:4101") +AnnotationAssertion( "BTO:0000989") +AnnotationAssertion( "CALOHA:TS-1015") +AnnotationAssertion( "EMAPA:35850") +AnnotationAssertion( "FMA:54825") +AnnotationAssertion( "GAID:815") +AnnotationAssertion( "MA:0001591") +AnnotationAssertion( "MESH:D013650") +AnnotationAssertion( "NCIT:C96518") +AnnotationAssertion( "SCTID:362099006") +AnnotationAssertion( "TAO:0001074") +AnnotationAssertion( "VHOG:0000130") +AnnotationAssertion( "Wikipedia:Taste_bud") +AnnotationAssertion( "XAO:0000445") +AnnotationAssertion( "ZFA:0001074") +AnnotationAssertion( "http://uri.neuinfo.org/nif/nifstd/nifext_14") +AnnotationAssertion(rdfs:label "taste bud") +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (cavity of pharynx) AnnotationAssertion(Annotation( "OBOL:automatic") "An anatomical space that is enclosed by a pharynx.") @@ -45349,6 +52921,87 @@ SubClassOf( ObjectSomeValuesFrom( SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (larynx) + +AnnotationAssertion(Annotation( "Wikipedia:Larynx") Annotation( "http://orcid.org/0000-0002-6601-2165") "A continuation of the pharynx that is involved in breathing, sound production, and protecting the trachea against food aspiration.") +AnnotationAssertion( "AAO:0000268") +AnnotationAssertion( "BTO:0001208") +AnnotationAssertion( "CALOHA:TS-0532") +AnnotationAssertion( "EFO:0000838") +AnnotationAssertion( "EHDAA2:0004063") +AnnotationAssertion( "EMAPA:18333") +AnnotationAssertion( "EV:0100039") +AnnotationAssertion( "FMA:55097") +AnnotationAssertion( "GAID:108") +AnnotationAssertion( "MA:0000414") +AnnotationAssertion( "MAT:0000187") +AnnotationAssertion( "MESH:D007830") +AnnotationAssertion( "MIAA:0000187") +AnnotationAssertion( "NCIT:C12420") +AnnotationAssertion( "SCTID:181212004") +AnnotationAssertion( "VHOG:0001279") +AnnotationAssertion( "Wikipedia:Larynx") +AnnotationAssertion( "XAO:0003081") +AnnotationAssertion( "galen:Larynx") +AnnotationAssertion(rdfs:label "larynx") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (laryngeal cartilage) + +AnnotationAssertion(Annotation( "MP:0002256") "The cartilaginous structures that support the larynx.") +AnnotationAssertion( "BTO:0003660") +AnnotationAssertion( "EHDAA:8157") +AnnotationAssertion( "EMAPA:18697") +AnnotationAssertion( "FMA:55108") +AnnotationAssertion( "GAID:107") +AnnotationAssertion( "MA:0001758") +AnnotationAssertion( "MESH:D007817") +AnnotationAssertion( "NCIT:C12281") +AnnotationAssertion( "SCTID:263482005") +AnnotationAssertion( "VHOG:0001550") +AnnotationAssertion(rdfs:label "laryngeal cartilage") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (vagus nerve) + +AnnotationAssertion(Annotation( "ISBN:0471209627") Annotation( "Wikipedia:Vagus_nerve") "Cranial nerve that branches into the lateral (to body sense organs) and the intestino-accessorial (to the skin, muscles of shoulder, hyoid, larynx, gut, lungs, and heart).") +AnnotationAssertion( ) +AnnotationAssertion( "AAO:0010475") +AnnotationAssertion( "BAMS:10n") +AnnotationAssertion( "BAMS:Xn") +AnnotationAssertion( "BIRNLEX:801") +AnnotationAssertion( "BTO:0003472") +AnnotationAssertion( "EFO:0002549") +AnnotationAssertion( "FMA:5731") +AnnotationAssertion( "GAID:721") +AnnotationAssertion( "MA:0001106") +AnnotationAssertion( "MBA:917") +AnnotationAssertion( "MESH:D014630") +AnnotationAssertion( "NCIT:C12812") +AnnotationAssertion( "SCTID:362466001") +AnnotationAssertion( "TAO:0000453") +AnnotationAssertion( "VHOG:0000737") +AnnotationAssertion( "Wikipedia:Vagus_nerve") +AnnotationAssertion( "XAO:0003097") +AnnotationAssertion( "ZFA:0000453") +AnnotationAssertion( "galen:VagusNerve") +AnnotationAssertion(rdfs:label "vagus nerve") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (anterior chamber of eyeball) AnnotationAssertion(Annotation( "MESH:A09.371.060.067") Annotation( "MP:0005205") "The space in the eye, filled with aqueous humor, and bounded anteriorly by the cornea and a small portion of the sclera and posteriorly by a small portion of the ciliary body, the iris, and part of the crystalline lens.") @@ -45394,6 +53047,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (iris) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8") Annotation( "MP:0001322") "The adjustable membrane, composed of the stroma and pigmented epithelium, located just in front of the crystalline lens within the eye.") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0010347") AnnotationAssertion( "BTO:0000653") AnnotationAssertion( "CALOHA:TS-0491") @@ -45421,6 +53075,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (corneal epithelium) AnnotationAssertion(Annotation( "MESH:A09.371.060.217.325") Annotation( "MGI:smb") Annotation( "MP:0006000") "The smooth stratified squamous epithelium that covers the outer surface of the cornea.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0000287") AnnotationAssertion( "CALOHA:TS-0173") AnnotationAssertion( "EFO:0001917") @@ -45446,6 +53101,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (sclera) AnnotationAssertion(Annotation( "Wikipedia:Sclera") Annotation( "ZFIN:ZDB-PUB-050701-15") "Opaque fibrous outer layer of the eyeball[ZFA,Kardong,WP].") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0010354") AnnotationAssertion( "BTO:0001606") AnnotationAssertion( "EMAPA:19027") @@ -45489,6 +53145,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (ciliary body) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8") Annotation( "MP:0005099") Annotation( "Wikipedia:Ciliary_body") "The thickened portion of the vascular tunic, which lies between the choroid and the iris, composed of ciliary muscle and ciliary processes.") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0010341") AnnotationAssertion( "BTO:0000260") AnnotationAssertion( "CALOHA:TS-0694") @@ -45516,6 +53173,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (optic choroid) AnnotationAssertion(Annotation( "Wikipedia:Choroid") "Vascular layer containing connective tissue, of the eye lying between the retina and the sclera. The choroid provides oxygen and nourishment to the outer layers of the retina. Along with the ciliary body and iris, the choroid forms the uveal tract[WP].") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0001829") AnnotationAssertion( "CALOHA:TS-2054") AnnotationAssertion( "EMAPA:19077") @@ -45568,6 +53226,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (ciliary epithelium) AnnotationAssertion(Annotation( "Wikipedia:Ciliary_body#Ciliary_epithelium") "A double layer covering the ciliary body that produces aqueous humor.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0001770") AnnotationAssertion( "CALOHA:TS-0695") AnnotationAssertion( "EMAPA:35239") @@ -45603,6 +53262,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (spinal nerve) AnnotationAssertion(Annotation( "MESH:A08.800.800.720") Annotation( "MP:0001077") "The any of the paired peripheral nerves formed by the union of the dorsal and ventral spinal roots from each spinal cord segment[MP,modified].") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0011101") AnnotationAssertion( "BAMS:spin") AnnotationAssertion( "BTO:0000870") @@ -45642,6 +53302,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (cranial nerve) AnnotationAssertion(Annotation( "Wikipedia:Cranial_nerve") "Cranial nerves are nerves that emerge directly from the brain, in contrast to spinal nerves, which emerge from segments of the spinal cord.") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0000108") AnnotationAssertion( "BAMS:cran") AnnotationAssertion( "BIRNLEX:1623") @@ -45694,6 +53355,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (sensory ganglion) AnnotationAssertion(Annotation( "MP:0000960") "The clusters of neurons in the somatic peripheral nervous system which contain the cell bodies of sensory nerve axons, interneurons and non-neuronal supporting cells.") +AnnotationAssertion( ) AnnotationAssertion( "AEO:0001000") AnnotationAssertion( "BTO:0005630") AnnotationAssertion( "EMAPA:36596") @@ -45744,6 +53406,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (epithelium of lens) AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") "A layer of epithelial cells that is part of the eye.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0001873") AnnotationAssertion( "CALOHA:TS-0543") AnnotationAssertion( "EMAPA:32871") @@ -45786,6 +53449,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (autonomic ganglion) AnnotationAssertion(Annotation( "Wikipedia:Autonomic_ganglion") "Ganglion that has dendrites that form a junction between autonomic nerves originating from the central nervous system and autonomic nerves innervating their target organs in the periphery. There are two subtypes, sympathetic ganglion and parasympathetic ganglion.") +AnnotationAssertion( ) AnnotationAssertion( "AEO:0001001") AnnotationAssertion( "CALOHA:TS-2340") AnnotationAssertion( "EMAPA:18221") @@ -45822,6 +53486,79 @@ SubClassOf( ObjectSomeValuesFrom( SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (parasympathetic ganglion) + +AnnotationAssertion(Annotation( "NLXANAT:100303") "Ganglion containing neurons that receive innervation from parasympathetic neurons in the central nervous system and subserves parasympathetic functions through innervation of smooth muscle, cardiac muscle and glands.") +AnnotationAssertion( ) +AnnotationAssertion( "BTO:0001256") +AnnotationAssertion( "EHDAA2:0001400") +AnnotationAssertion( "EMAPA:32813") +AnnotationAssertion( "FMA:5894") +AnnotationAssertion( "MA:0002469") +AnnotationAssertion( "NCIT:C52557") +AnnotationAssertion( "NLXANAT:100303") +AnnotationAssertion( "SCTID:279284004") +AnnotationAssertion( "Wikipedia:Parasympathetic_ganglion") +AnnotationAssertion(rdfs:label "parasympathetic ganglion") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (nasal cartilage) + +AnnotationAssertion(Annotation( "Wikipedia:Nasal_cartilage") "One of the cartilage structures in the nose that provide form and support[WP].") +AnnotationAssertion( "CALOHA:TS-0655") +AnnotationAssertion( "FMA:59502") +AnnotationAssertion( "MA:0001883") +AnnotationAssertion( "NCIT:C49593") +AnnotationAssertion( "SCTID:278941001") +AnnotationAssertion( "Wikipedia:Nasal_cartilage") +AnnotationAssertion(rdfs:label "nasal cartilage") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (mucosa of larynx) + +AnnotationAssertion(Annotation( "MP:0002261") "The mucous lining of the larynx, which is composed of squamous epithelium in the upper larynx and ciliated columnar epithelium in the lower larynx.") +AnnotationAssertion( "EMAPA:18334") +AnnotationAssertion( "FMA:59662") +AnnotationAssertion( "GAID:301") +AnnotationAssertion( "MA:0001766") +AnnotationAssertion( "MESH:D007820") +AnnotationAssertion( "NCIT:C49246") +AnnotationAssertion( "SCTID:361940006") +AnnotationAssertion(rdfs:label "mucosa of larynx") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (nasal cavity mucosa) + +AnnotationAssertion(Annotation( "MP:0002238") "The mucous membrane that lines the nasal cavity[MP].") +AnnotationAssertion( "BTO:0000912") +AnnotationAssertion( "CALOHA:TS-0657") +AnnotationAssertion( "EMAPA:36026") +AnnotationAssertion( "FMA:59684") +AnnotationAssertion( "GAID:302") +AnnotationAssertion( "SCTID:310211009") +AnnotationAssertion( "Wikipedia:Mucous_membrane_of_nose") +AnnotationAssertion(rdfs:label "nasal cavity mucosa") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (lip) AnnotationAssertion(Annotation( "Wikipedia:Lip") Annotation( "http://www.medterms.com/script/main/art.asp?articlekey=9458") "One of the two fleshy folds which surround the opening of the mouth.") @@ -45842,6 +53579,7 @@ AnnotationAssertion( "lip") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -45879,9 +53617,138 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (internal ear) + +AnnotationAssertion(Annotation( "PMID:16217737") Annotation( "Wikipedia:Internal_ear") Annotation( "ZFIN:curator") "Complex labyrinthine structure that comprises sensory endorgans specialized for vestibular, auditory, and acoustico-vestibular sensation.") +AnnotationAssertion( "AAO:0000238") +AnnotationAssertion( "BIRNLEX:1196") +AnnotationAssertion( "BTO:0000630") +AnnotationAssertion( "CALOHA:TS-0478") +AnnotationAssertion( "EFO:0001363") +AnnotationAssertion( "EHDAA2:0000831") +AnnotationAssertion( "EHDAA:504") +AnnotationAssertion( "EMAPA:16194") +AnnotationAssertion( "EV:0100361") +AnnotationAssertion( "FMA:60909") +AnnotationAssertion( "GAID:871") +AnnotationAssertion( "MA:0000237") +AnnotationAssertion( "MAT:0000145") +AnnotationAssertion( "MESH:D007758") +AnnotationAssertion( "MIAA:0000145") +AnnotationAssertion( "NCIT:C12499") +AnnotationAssertion( "SCTID:181189006") +AnnotationAssertion( "SCTID:304982002") +AnnotationAssertion( "TAO:0000217") +AnnotationAssertion( "VHOG:0000284") +AnnotationAssertion( "Wikipedia:Internal_ear") +AnnotationAssertion( "XAO:0000192") +AnnotationAssertion( "ZFA:0000217") +AnnotationAssertion( "galen:InnerEar") +AnnotationAssertion(rdfs:label "internal ear") +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (cerebral hemisphere) + +AnnotationAssertion(Annotation( "FMA:61817") Annotation( "Wikipedia:Cerebral_hemisphere") "One of two bilateral, largely symmetrical organ subdivisions within the telencephalon which contain the cerebral cortex and cerebral white matter.[FMA].") +AnnotationAssertion( "AAO:0010480") +AnnotationAssertion( "BAMS:HEM") +AnnotationAssertion( "BIRNLEX:1042") +AnnotationAssertion( "BTO:0000231") +AnnotationAssertion( "CALOHA:TS-2007") +AnnotationAssertion( "DMBA:15739") +AnnotationAssertion( "EFO:0002521") +AnnotationAssertion( "EMAPA:16653") +AnnotationAssertion( "FMA:61817") +AnnotationAssertion( "MA:0000133") +AnnotationAssertion( "MBA:403") +AnnotationAssertion( "NCIT:C12351") +AnnotationAssertion( "SCTID:278251007") +AnnotationAssertion( "VHOG:0001639") +AnnotationAssertion( "Wikipedia:Cerebral_hemisphere") +AnnotationAssertion( "galen:CerebralHemisphere") +AnnotationAssertion(rdfs:label "cerebral hemisphere") +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (frontal cortex) + +AnnotationAssertion(Annotation( "NLXANAT:20090601") "Anterior portion of the neocortex, lying anterior to the central sulcus in humans. It is bounded by the parietal cortex posteriorly and the temporal cortex laterally[NIFSTD,modified].") +AnnotationAssertion( ) +AnnotationAssertion( "BTO:0000484") +AnnotationAssertion( "DHBA:10161") +AnnotationAssertion( "DMBA:16002") +AnnotationAssertion( "EMAPA:35357") +AnnotationAssertion( "FMA:242199") +AnnotationAssertion( "GAID:674") +AnnotationAssertion( "MA:0000905") +AnnotationAssertion( "NLXANAT:20090601") +AnnotationAssertion( "Wikipedia:Frontal_lobe") +AnnotationAssertion(rdfs:label "frontal cortex") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (temporal lobe) + +AnnotationAssertion(Annotation( "BIRNLEX:1160") "Lower lateral part of the cerebral hemisphere. (MSH).") +AnnotationAssertion( ) +AnnotationAssertion( "BAMS:TL") +AnnotationAssertion( "BAMS:Temporal_lobe") +AnnotationAssertion( "BIRNLEX:1160") +AnnotationAssertion( "BTO:0001355") +AnnotationAssertion( "CALOHA:TS-1020") +AnnotationAssertion( "DHBA:12139") +AnnotationAssertion( "EFO:0000917") +AnnotationAssertion( "EMAPA:18797") +AnnotationAssertion( "EV:0100169") +AnnotationAssertion( "FMA:61825") +AnnotationAssertion( "GAID:635") +AnnotationAssertion( "HBA:4132") +AnnotationAssertion( "MAT:0000508") +AnnotationAssertion( "MESH:D013702") +AnnotationAssertion( "NCIT:C12353") +AnnotationAssertion( "SCTID:180921000") +AnnotationAssertion( "Wikipedia:Temporal_lobe") +AnnotationAssertion(rdfs:comment "Boundary notes: It is bounded dorsally by the lateral fissure and posteriorly by an arbitrary border shared with the occipital lobe. [Wikipedia:Temporal_lobe]") +AnnotationAssertion(rdfs:label "temporal lobe") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (parietal lobe) + +AnnotationAssertion(Annotation( "BIRNLEX:1148") "Upper central part of the cerebral hemisphere. (MSH).") +AnnotationAssertion( ) +AnnotationAssertion( "BAMS:Parietal_lobe") +AnnotationAssertion( "BIRNLEX:1148") +AnnotationAssertion( "BTO:0001001") +AnnotationAssertion( "CALOHA:TS-0747") +AnnotationAssertion( "DHBA:12131") +AnnotationAssertion( "EFO:0000914") +AnnotationAssertion( "EV:0100168") +AnnotationAssertion( "FMA:61826") +AnnotationAssertion( "GAID:680") +AnnotationAssertion( "HBA:4084") +AnnotationAssertion( "MAT:0000506") +AnnotationAssertion( "MESH:D010296") +AnnotationAssertion( "NCIT:C12354") +AnnotationAssertion( "SCTID:180922007") +AnnotationAssertion( "Wikipedia:Parietal_lobe") +AnnotationAssertion(rdfs:label "parietal lobe") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (phrenic nerve) AnnotationAssertion(Annotation( "VHOG:0000728") "A nerve that arises from the caudal cervical nerves and is primarily the motor nerve of the diaphragm but also sends sensory fibers to the pericardium.") +AnnotationAssertion( ) AnnotationAssertion( "BAMS:phn") AnnotationAssertion( "BTO:0001063") AnnotationAssertion( "EHDAA:4677") @@ -45900,9 +53767,77 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (choroid plexus) + +AnnotationAssertion(Annotation( "ISBN:0471888893") Annotation( "Wikipedia:Choroid_plexus") "A network formed by blood vessels and the tela choroidea which secretes CSF into the ventricular spaces.") +AnnotationAssertion( "BAMS:CHP") +AnnotationAssertion( "BAMS:GHP") +AnnotationAssertion( "BAMS:chp") +AnnotationAssertion( "BAMS:chpl") +AnnotationAssertion( "BTO:0000258") +AnnotationAssertion( "CALOHA:TS-0145") +AnnotationAssertion( "EFO:0001915") +AnnotationAssertion( "EMAPA:32741") +AnnotationAssertion( "FMA:61934") +AnnotationAssertion( "GAID:607") +AnnotationAssertion( "MA:0000823") +AnnotationAssertion( "MBA:108") +AnnotationAssertion( "MESH:D002831") +AnnotationAssertion( "NCIT:C12694") +AnnotationAssertion( "SCTID:264450003") +AnnotationAssertion( "TAO:0001443") +AnnotationAssertion( "VHOG:0001377") +AnnotationAssertion( "Wikipedia:Choroid_plexus") +AnnotationAssertion( "ZFA:0001443") +AnnotationAssertion( "neuronames:1377") +AnnotationAssertion(rdfs:label "choroid plexus") +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (forebrain) + +AnnotationAssertion(Annotation( "Wikipedia:Forebrain") Annotation( "ZFIN:ZDB-PUB-961014-576") "The most anterior region of the brain including both the telencephalon and diencephalon.") +AnnotationAssertion( ) +AnnotationAssertion( "AAO:0010147") +AnnotationAssertion( "BAMS:FB") +AnnotationAssertion( "BAMS:Forebrain") +AnnotationAssertion( "BIRNLEX:1509") +AnnotationAssertion( "BTO:0000478") +AnnotationAssertion( "CALOHA:TS-0380") +AnnotationAssertion( "DHBA:10156") +AnnotationAssertion( "DMBA:15566") +AnnotationAssertion( "EFO:0000909") +AnnotationAssertion( "EHDAA2:0000556") +AnnotationAssertion( "EHDAA:3470") +AnnotationAssertion( "EMAPA:16895") +AnnotationAssertion( "FMA:61992") +AnnotationAssertion( "MA:0000170") +AnnotationAssertion( "MAT:0000105") +AnnotationAssertion( "MESH:D016548") +AnnotationAssertion( "MIAA:0000105") +AnnotationAssertion( "NCIT:C40185") +AnnotationAssertion( "SCTID:362291003") +AnnotationAssertion( "TAO:0000109") +AnnotationAssertion( "VHOG:0000383") +AnnotationAssertion( "Wikipedia:Forebrain") +AnnotationAssertion( "XAO:0000011") +AnnotationAssertion( "ZFA:0000109") +AnnotationAssertion(rdfs:label "forebrain") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +DisjointClasses( ) + # Class: (midbrain) AnnotationAssertion(Annotation( "GO:0030901") "The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles)[GO].") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0010149") AnnotationAssertion( "BAMS:MES") AnnotationAssertion( "BIRNLEX:1667") @@ -45958,6 +53893,89 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (telencephalon) + +AnnotationAssertion(Annotation( "AAO:0010479") Annotation( "XAO:0000012") "Part of the forebrain consisting of paired olfactory bulbs and cerebral hemispheres.") +AnnotationAssertion( "AAO:0010479") +AnnotationAssertion( "BAMS:CB") +AnnotationAssertion( "BAMS:CH") +AnnotationAssertion( "BAMS:IV") +AnnotationAssertion( "BAMS:Tel") +AnnotationAssertion( "BIRNLEX:1115") +AnnotationAssertion( "BM:Tel") +AnnotationAssertion( "BTO:0000239") +AnnotationAssertion( "CALOHA:TS-1018") +AnnotationAssertion( "DHBA:10158") +AnnotationAssertion( "EFO:0000912") +AnnotationAssertion( "EHDAA2:0001982") +AnnotationAssertion( "EMAPA:16910") +AnnotationAssertion( "EV:0100165") +AnnotationAssertion( "FMA:62000") +AnnotationAssertion( "GAID:621") +AnnotationAssertion( "HBA:4007") +AnnotationAssertion( "MA:0000183") +AnnotationAssertion( "MAT:0000421") +AnnotationAssertion( "MBA:567") +AnnotationAssertion( "MESH:D013687") +AnnotationAssertion( "MIAA:0000421") +AnnotationAssertion( "PBA:128011350") +AnnotationAssertion( "SCTID:263353005") +AnnotationAssertion( "TAO:0000079") +AnnotationAssertion( "VHOG:0000283") +AnnotationAssertion( "Wikipedia:Telencephalon") +AnnotationAssertion( "XAO:0000012") +AnnotationAssertion( "ZFA:0000079") +AnnotationAssertion(rdfs:label "telencephalon") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (diencephalon) + +AnnotationAssertion(Annotation( "Wikipedia:Diencephalon") "The division of the forebrain that develops from the foremost primary cerebral vesicle.") +AnnotationAssertion( "AAO:0010481") +AnnotationAssertion( "BAMS:DI") +AnnotationAssertion( "BAMS:Di") +AnnotationAssertion( "BAMS:DiE") +AnnotationAssertion( "BAMS:IB") +AnnotationAssertion( "BAMS:Zh.") +AnnotationAssertion( "BIRNLEX:1503") +AnnotationAssertion( "BM:Die") +AnnotationAssertion( "BTO:0000342") +AnnotationAssertion( "CALOHA:TS-0199") +AnnotationAssertion( "DHBA:10389") +AnnotationAssertion( "DMBA:16308") +AnnotationAssertion( "EFO:0000911") +AnnotationAssertion( "EHDAA2:0000385") +AnnotationAssertion( "EHDAA:1969") +AnnotationAssertion( "EHDAA:2645") +AnnotationAssertion( "EHDAA:3472") +AnnotationAssertion( "EMAPA:16896") +AnnotationAssertion( "EV:0100194") +AnnotationAssertion( "FMA:62001") +AnnotationAssertion( "GAID:618") +AnnotationAssertion( "HBA:4391") +AnnotationAssertion( "MA:0000171") +AnnotationAssertion( "MAT:0000420") +AnnotationAssertion( "MBA:1129") +AnnotationAssertion( "MESH:D004027") +AnnotationAssertion( "MIAA:0000420") +AnnotationAssertion( "NCIT:C12456") +AnnotationAssertion( "PBA:128013010") +AnnotationAssertion( "SCTID:279328001") +AnnotationAssertion( "TAO:0000101") +AnnotationAssertion( "VHOG:0000318") +AnnotationAssertion( "Wikipedia:Diencephalon") +AnnotationAssertion( "XAO:0000013") +AnnotationAssertion( "ZFA:0000101") +AnnotationAssertion(rdfs:label "diencephalon") +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (metencephalon) AnnotationAssertion(Annotation( "Wikipedia:Metencephalon") Annotation( "https://github.com/obophenotype/uberon/issues/300") "Rostral segment of the hindbrain that has as its parts the pons (where present) and the cerebellum[WP,modified].") @@ -45986,6 +54004,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (medulla oblongata) AnnotationAssertion(Annotation( "FMA:62004") Annotation( "GO:0021550") Annotation( "Wikipedia:Bone_marrow_of_ovary_oblongata") "Organ component of neuraxis that has as its parts the medullary reticular formation, inferior olivary complex and cochlear nuclear complex, among other structures[FMA]. The medulla oblongata lies directly above the spinal cord and controls vital autonomic functions such as digestion, breathing and the control of heart rate[GO].") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0010486") AnnotationAssertion( "BAMS:MY") AnnotationAssertion( "BAMS:Md") @@ -46026,6 +54045,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (epithelium of trachea) AnnotationAssertion(Annotation( "ISBN:0-397-51047-0") Annotation( "MGI:cwg") Annotation( "MP:0002285") "The epithelial lining of the trachea which contains numerous ciliated cells.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0001389") AnnotationAssertion( "CALOHA:TS-1061") AnnotationAssertion( "EHDAA2:0002069") @@ -46138,6 +54158,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (midbrain tegmentum) AnnotationAssertion(Annotation( "FMA:FMA") Annotation( "ISBN:0471888893") Annotation( "Wikipedia:Midbrain_tegmentum") "Ventral part of the midbrain, separated from the hindbrain by the isthmus[ISBN:0471888893]. Subdivision of the midbrain lying anterior to the tectum and posterior to the substantia nigra and cerebral peduncle[FMA] The part of the midbrain extending from the substantia nigra to the cerebral aqueduct in a horizontal section of the midbrain. It forms the floor of the midbrain that surrounds the cerebral aqueduct[WP].") +AnnotationAssertion( ) AnnotationAssertion( "BAMS:MTg") AnnotationAssertion( "BIRNLEX:1200") AnnotationAssertion( "BTO:0003388") @@ -46174,9 +54195,35 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (neocortex) + +AnnotationAssertion(Annotation( "BIRNLEX:2547") Annotation( "OldNeuroNames:754") "An area of cerebral cortex defined on the basis of cytoarchitecture that have six layers. Starting from the cortical surface the layers are: molecular layer (I), external granular layer (II), external pyramidal layer (III), internal granular layer (IV), internal pyramidal layer (V), and multiform layer (VI). Neocortex is most prominent in the frontal lobe, the parietal lobe, the temporal lobe and the occipital lobe, less so in the cingulate gyrus, the parahippocampal gyrus and the insula. It is composed of two subdivisions: true isocortex and proisocortex (Carpenter-83)(NN).") +AnnotationAssertion( "BAMS:ISO") +AnnotationAssertion( "BAMS:Iso-cortex") +AnnotationAssertion( "BAMS:NCX") +AnnotationAssertion( "BIRNLEX:2547") +AnnotationAssertion( "BTO:0000920") +AnnotationAssertion( "DHBA:10160") +AnnotationAssertion( "EHDAA2:0004662") +AnnotationAssertion( "EMAPA:32842") +AnnotationAssertion( "EMAPA:35589") +AnnotationAssertion( "FMA:62429") +AnnotationAssertion( "GAID:677") +AnnotationAssertion( "MA:0002754") +AnnotationAssertion( "MBA:315") +AnnotationAssertion( "MESH:D019579") +AnnotationAssertion( "PBA:294021746") +AnnotationAssertion( "Wikipedia:Neocortex") +AnnotationAssertion(rdfs:label "neocortex") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (epithelium of respiratory bronchiole) AnnotationAssertion(Annotation( "OBOL:automatic") "An epithelium that is part of a respiratory bronchiole [Automatically generated definition].") +AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35730") AnnotationAssertion( "FMA:62498") AnnotationAssertion( "MA:0001773") @@ -46189,6 +54236,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (cartilage of bronchus) AnnotationAssertion(Annotation( "MP:0010988") "The hyaline cartilaginous structures that support the bronchi, present as irregular rings in the larger bronchi (and not as regular as in the trachea), and as small plates and islands in the smaller bronchi; as the branching continues through the bronchial tree, the amount of hyaline cartilage in the walls decreases until it is absent in the smallest bronchioles[MP].") +AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35192") AnnotationAssertion( "FMA:62649") AnnotationAssertion( "MA:0001835") @@ -46219,6 +54267,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (terminal bronchiole epithelium) AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") "An epithelium that lines a terminal bronchiole.") +AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36283") AnnotationAssertion( "FMA:62794") AnnotationAssertion( "MA:0001774") @@ -46348,6 +54397,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (parenchyma of pancreas) +AnnotationAssertion( ) AnnotationAssertion( "EMAPA:32925") AnnotationAssertion( "FMA:63120") AnnotationAssertion( "MA:0000724") @@ -46361,6 +54411,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (venule) AnnotationAssertion(Annotation( "MESH:A07.231.432.952") Annotation( "MP:0004125") "One of the minute vessels that collect deoxygenated blood from the capillary plexuses returns it to the veins.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0002626") AnnotationAssertion( "EMAPA:35917") AnnotationAssertion( "FMA:63130") @@ -46404,6 +54455,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (blood vessel) AnnotationAssertion(Annotation( "BTO:0001102") Annotation( "Wikipedia:Blood_vessel") "A vessel through which blood circulates in the body.") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0011004") AnnotationAssertion( "AEO:0000207") AnnotationAssertion( "BTO:0001102") @@ -46442,6 +54494,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (capillary) AnnotationAssertion(Annotation( "ISBN:0073040584") Annotation( "Wikipedia:Capillary") Annotation( "https://github.com/obophenotype/uberon/issues/137") "Any of the smallest blood vessels connecting arterioles with venules.") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0010252") AnnotationAssertion( "BTO:0002045") AnnotationAssertion( "CALOHA:TS-2006") @@ -46467,6 +54520,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (corneal endothelium) AnnotationAssertion(Annotation( "Wikipedia:Corneal_endothelium") "A monolayer of specialized, flattened, mitochondria-rich cells that lines the posterior surface of the cornea and faces the anterior chamber of the eye[WP].") +AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-0172") AnnotationAssertion( "EMAPA:35935") AnnotationAssertion( "FMA:63882") @@ -46490,6 +54544,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (endothelium) AnnotationAssertion(Annotation( "FMA:63916") Annotation( "MESH:A10.272.491") Annotation( "https://github.com/obophenotype/uberon/issues/225") "A layer of epithelium that lines the heart, blood vessels (endothelium, vascular), lymph vessels (endothelium, lymphatic), and the serous cavities of the body[MESH]. Simple squamous epithelium which lines blood and lymphatic vessels and the heart[FMA].") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0000393") AnnotationAssertion( "CALOHA:TS-0278") AnnotationAssertion( "EFO:0002548") @@ -46504,7 +54559,7 @@ AnnotationAssertion(rdfs:label " EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (feces) @@ -46545,6 +54600,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (pulmonary artery) AnnotationAssertion(Annotation( "Wikipedia:Pulmonary_artery") Annotation( "http://orcid.org/0000-0002-6601-2165") "An artery that carries deoxygenated blood from heart to the lungs. They are the only arteries (other than umbilical arteries in the fetus) that carry deoxygenated blood..") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0010221") AnnotationAssertion( "BTO:0000778") AnnotationAssertion( "CALOHA:TS-0839") @@ -46577,6 +54633,7 @@ DisjointClasses( (pulmonary vein) AnnotationAssertion(Annotation( "GO:0060577") "Pulmonary veins are blood vessels that transport blood from the lungs to the heart[GO].") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0010521") AnnotationAssertion( "BTO:0001799") AnnotationAssertion( "CALOHA:TS-0840") @@ -46605,6 +54662,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (portal vein) AnnotationAssertion(Annotation( "BTO:0001792") "A vein that conducts blood from the digestive organs, spleen, pancreas, and gallbladder to the liver[BTO].") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0001792") AnnotationAssertion( "CALOHA:TS-0814") AnnotationAssertion( "EHDAA2:0001485") @@ -46623,6 +54681,34 @@ AnnotationAssertion(rdfs:label " SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (accessory XI nerve) + +AnnotationAssertion(Annotation( "BIRNLEX:812") Annotation( "http://orcid.org/0000-0002-6601-2165") "A cranial nerve that originates from neurons in the medulla and in the cervical spinal cord.") +AnnotationAssertion( "AAO:0010476") +AnnotationAssertion( "BAMS:11n") +AnnotationAssertion( "BAMS:XIn") +AnnotationAssertion( "BIRNLEX:812") +AnnotationAssertion( "EHDAA2:0000106") +AnnotationAssertion( "EHDAA:2855") +AnnotationAssertion( "EMAPA:17265") +AnnotationAssertion( "FMA:6720") +AnnotationAssertion( "FMA:80284") +AnnotationAssertion( "GAID:825") +AnnotationAssertion( "MA:0001088") +AnnotationAssertion( "MBA:717") +AnnotationAssertion( "MESH:D000055") +AnnotationAssertion( "NCIT:C32041") +AnnotationAssertion( "SCTID:362469008") +AnnotationAssertion( "VHOG:0000699") +AnnotationAssertion( "Wikipedia:Spinal_accessory_nerve") +AnnotationAssertion( "XAO:0004214") +AnnotationAssertion( "neuronames:2085") +AnnotationAssertion(rdfs:label "accessory XI nerve") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (gray matter) AnnotationAssertion(Annotation( "Wikipedia:Gray_matter") Annotation( "http://orcid.org/0000-0002-6601-2165") "A nervous system structure composed primarily of nerve cell bodies (somas). May also include dendrites and the initial unmyelinated portion of axons.") @@ -46642,9 +54728,36 @@ AnnotationAssertion(rdfs:label " SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (stratum basale of epidermis) + +AnnotationAssertion(Annotation( "ISBN:0-683-40008-8") Annotation( "MP:0001231") "The deepest layer of the epidermis, which is composed of dividing stem cells and anchoring cells.") +AnnotationAssertion( ) +AnnotationAssertion( "AAO:0010598") +AnnotationAssertion( "BTO:0000438") +AnnotationAssertion( "EMAPA:32779") +AnnotationAssertion( "FMA:67540") +AnnotationAssertion( "MA:0000803") +AnnotationAssertion( "NCIT:C33466") +AnnotationAssertion( "NCIT:C33623") +AnnotationAssertion( "SCTID:419481005") +AnnotationAssertion( "TAO:0001180") +AnnotationAssertion( "Wikipedia:Stratum_germinativum") +AnnotationAssertion( "XAO:0000041") +AnnotationAssertion( "ZFA:0001180") +AnnotationAssertion(rdfs:label "stratum basale of epidermis") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (hindbrain) AnnotationAssertion(Annotation( "Wikipedia:Rhombencephalon") Annotation( "ZFA:0000029") Annotation( "ZFIN:curator") "The most posterior of the three principal regions of the brain. In mammals and birds the hindbrain is divided into a rostral metencephalon and a caudal myelencephalon. In zebrafish, with the exception of the cerebellum, the ventral remainder of the metencephalon can be separated only arbitrarily from the more caudal myelencephalic portion of the medulla oblongata (From: Neuroanatomy of the Zebrafish Brain)[ZFA]. Organ component of neuraxis that has as its parts the pons, cerebellum and medulla oblongata[FMA].") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0010150") AnnotationAssertion( "BAMS:HB") AnnotationAssertion( "BIRNLEX:942") @@ -46673,7 +54786,7 @@ AnnotationAssertion( "hindbrain") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -46730,9 +54843,49 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (cerebellum) + +AnnotationAssertion(Annotation( "BTO:0000232") Annotation( "ISBN:3764351209") Annotation( "MESH:A08.186.211.132.810.428.200") Annotation( "ZFA:0000100") Annotation( "https://sourceforge.net/tracker/index.php?func=detail&aid=3291162&group_id=76834&atid=1205376") "Part of the metencephalon that lies in the posterior cranial fossa behind the brain stem. It is concerned with the coordination of movement[MESH]. A large dorsally projecting part of the brain concerned especially with the coordination of muscles and the maintenance of bodily equilibrium, situated between the brain stem and the back of the cerebrum , and formed in humans of two lateral lobes and a median lobe[BTO]. Brain structure derived from the anterior hindbrain, and perhaps including posterior midbrain. The cerebellum plays a role in somatic motor function, the control of muscle tone, and balance[ZFA].") +AnnotationAssertion( ) +AnnotationAssertion( "AAO:0010485") +AnnotationAssertion( "BAMS:CB") +AnnotationAssertion( "BAMS:Cb") +AnnotationAssertion( "BIRNLEX:1489") +AnnotationAssertion( "BM:CB") +AnnotationAssertion( "BTO:0000232") +AnnotationAssertion( "CALOHA:TS-0125") +AnnotationAssertion( "DHBA:10656") +AnnotationAssertion( "EFO:0000327") +AnnotationAssertion( "EHDAA2:0000232") +AnnotationAssertion( "EMAPA:17787") +AnnotationAssertion( "EV:0100293") +AnnotationAssertion( "FMA:67944") +AnnotationAssertion( "GAID:595") +AnnotationAssertion( "HBA:4696") +AnnotationAssertion( "MA:0000198") +AnnotationAssertion( "MAT:0000110") +AnnotationAssertion( "MBA:512") +AnnotationAssertion( "MESH:D002531") +AnnotationAssertion( "MIAA:0000110") +AnnotationAssertion( "NCIT:C12445") +AnnotationAssertion( "SCTID:180924008") +AnnotationAssertion( "TAO:0000100") +AnnotationAssertion( "VHOG:0000024") +AnnotationAssertion( "Wikipedia:Cerebellum") +AnnotationAssertion( "XAO:0003098") +AnnotationAssertion( "ZFA:0000100") +AnnotationAssertion(rdfs:label "cerebellum") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (bronchial artery) AnnotationAssertion(Annotation( "UBERON:cjm") Annotation( "Wikipedia:Bronchial_artery") "A systemic artery that supplies the lung with with oxygenated blood.") +AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18608") AnnotationAssertion( "FMA:68109") AnnotationAssertion( "GAID:477") @@ -46772,6 +54925,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (lung) AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") "Respiration organ that develops as an outpocketing of the esophagus.") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0000275") AnnotationAssertion( "AAO:0010567") AnnotationAssertion( "BTO:0000763") @@ -46800,14 +54954,16 @@ SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vasculature) AnnotationAssertion(Annotation( "ZFA:0005249") "An interconnected tubular multi-tissue structure contains fluid that is actively transported around the organism[ZFA]. Examples: vasculature of lung, vasculature of face.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0003718") AnnotationAssertion( "FMA:69050") AnnotationAssertion( "TAO:0005249") @@ -46844,6 +55000,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (epithelium of bronchiole) AnnotationAssertion(Annotation( "OBOL:automatic") "An epithelium that is part of a bronchiole [Automatically generated definition].") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0001866") AnnotationAssertion( "CALOHA:TS-0570") AnnotationAssertion( "EMAPA:32693") @@ -46936,6 +55093,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (dermis) AnnotationAssertion(Annotation( "Wikipedia:Dermis") Annotation( "ZFIN:curator") "The dermis is a layer of skin between the epidermis (with which it makes up the skin) and subcutaneous tissues, and is composed of two layers, the papillary and reticular dermis[WP].") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0000128") AnnotationAssertion( "BTO:0000294") AnnotationAssertion( "CALOHA:TS-2076") @@ -46970,6 +55128,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (hypodermis) AnnotationAssertion(Annotation( "Wikipedia:Hypodermis") "Lowermost layer of the integumentary system in vertebrates. Types of cells that are found in the hypodermis are fibroblasts, adipose cells, and macrophages. It is derived from the mesoderm, but unlike the dermis, it is not derived from the dermatome region of the mesoderm. The hypodermis is used mainly for fat storage[WP].") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0001314") AnnotationAssertion( "CALOHA:TS-2366") AnnotationAssertion( "FMA:70544") @@ -47009,6 +55168,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (right cardiac atrium) AnnotationAssertion(Annotation( "Wikipedia:Right_atrium") Annotation( "http://orcid.org/0000-0002-6601-2165") "A cardiac atrium that is in the right side of the heart. It receives deoxygenated blood. In mammals, this comes from the superior and inferior vena cava and the coronary sinus, and pumps it into the right ventricle through the tricuspid valve.") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0010248") AnnotationAssertion( "BTO:0001703") AnnotationAssertion( "EHDAA2:0000290") @@ -47030,6 +55190,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (left cardiac atrium) AnnotationAssertion(Annotation( "Wikipedia:Left_atrium") Annotation( "http://orcid.org/0000-0002-6601-2165") "A cardiac atrium that is in the left side of the heart. It receives oxygenated blood from the pulmonary veins, In mammals this is pumped into the left ventricle, via the Mitral valve.") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0010247") AnnotationAssertion( "BTO:0001702") AnnotationAssertion( "EHDAA2:0000275") @@ -47051,6 +55212,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (heart right ventricle) AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") "A cardiac ventricle that is in the right side of the heart.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0001630") AnnotationAssertion( "CALOHA:TS-0443") AnnotationAssertion( "EHDAA2:0000196") @@ -47130,6 +55292,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (heart left ventricle) AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") "A cardiac ventricle that is in the left side of the heart.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0001629") AnnotationAssertion( "CALOHA:TS-0439") AnnotationAssertion( "EHDAA2:0002178") @@ -47194,6 +55357,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (appendicular skeleton) AnnotationAssertion(Annotation( "UBERONREF:0000003") Annotation( "Wikipedia:Appendicular_skeleton") Annotation( "https://orcid.org/0000-0002-6601-2165") "Subdivision of skeleton which which consists of all the skeletal elements in in the pectoral and pelvic appendage complexes[cjm].") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0000747") AnnotationAssertion( "EFO:0000951") AnnotationAssertion( "EMAPA:32729") @@ -47210,12 +55374,13 @@ AnnotationAssertion(rdfs:label " SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (interventricular septum) AnnotationAssertion(Annotation( "FMA:7133") "Cardiac septum which separates the right ventricle from the left ventricle.[FMA].") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0002483") AnnotationAssertion( "EFO:0001956") AnnotationAssertion( "EHDAA:2603") @@ -47233,26 +55398,10 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (mesentery) - -AnnotationAssertion(Annotation( "FMA:7144") Annotation( "Wikipedia:Mesentery") Annotation( "Wikipedia:Mesentery#Mesentery_.28general.29") Annotation( "https://github.com/obophenotype/uberon/issues/85") "Anatomical organ component composed of a double layer of serous membrane that suspends a viscus from the body wall or connects adjacent viscera and in doing so conveys blood vessels, lymphatics and nerves to and from the viscera. Examples: greater omentum, broad ligament of uterus, sigmoid mesocolon.") -AnnotationAssertion( "AAO:0011061") -AnnotationAssertion( "BTO:0001380") -AnnotationAssertion( "EV:0100083") -AnnotationAssertion( "FMA:7144") -AnnotationAssertion( "GAID:21") -AnnotationAssertion( "MESH:D008643") -AnnotationAssertion( "NCIT:C33103") -AnnotationAssertion( "SCTID:362707009") -AnnotationAssertion( "Wikipedia:Mesentery#Mesentery_.28general.29") -AnnotationAssertion( "galen:Mesentery") -AnnotationAssertion(rdfs:label "mesentery") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (skin of body) AnnotationAssertion(Annotation( "UBERON:cjm") "The organ covering the body that consists of the dermis and epidermis.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0001253") AnnotationAssertion( "CALOHA:TS-0934") AnnotationAssertion( "EFO:0000962") @@ -47350,6 +55499,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (spleen) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8") Annotation( "MP:0000689") "The organ that functions to filter blood and to store red corpuscles and platelets.") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0010395") AnnotationAssertion( "BTO:0001281") AnnotationAssertion( "CALOHA:TS-0956") @@ -47374,12 +55524,13 @@ AnnotationAssertion(rdfs:label " SubClassOf( ) SubClassOf( ) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (liver) AnnotationAssertion(Annotation( "BTO:0000759") Annotation( "Wikipedia:Liver") "An exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes[GO].") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0010111") AnnotationAssertion( "BTO:0000759") AnnotationAssertion( "CALOHA:TS-0564") @@ -47410,7 +55561,7 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -47422,6 +55573,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (small intestine) AnnotationAssertion(Annotation( "ISBN:0073040584") Annotation( "Wikipedia:Small_intestine") "Subdivision of digestive tract that connects the stomach to the large intestine and is where much of the digestion and absorption of food takes place (with the exception of ruminants). The mammalian small intestine is long and coiled and can be differentiated histologically into: duodenum, jejunem, ileum[WP,cjm,Kardong].") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0010397") AnnotationAssertion( "BTO:0000651") AnnotationAssertion( "CALOHA:TS-0942") @@ -47446,9 +55598,21 @@ AnnotationAssertion(rdfs:label " SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (pair of nares) + +AnnotationAssertion(Annotation( "Wikipedia:Nares") "Pair of nostrils.") +AnnotationAssertion( "FMA:72005") +AnnotationAssertion( "Wikipedia:Nares") +AnnotationAssertion(rdfs:label "pair of nares") +EquivalentClasses( ObjectIntersectionOf( ObjectExactCardinality(2 ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (gallbladder) AnnotationAssertion(Annotation( "Wikipedia:Gallbladder") "An organ that aids digestion and stores bile produced by the liver[WP].") @@ -47514,6 +55678,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (duodenum) AnnotationAssertion(Annotation( "ISBN:0815318960") Annotation( "Wikipedia:Duodenum") "The first part of the small intestine. At the junction of the stomach and the duodenum the alimentary canal is inflected. The duodenum first goes anteriorly for a short distance, turns dorsally, and eventually caudally, thus it is a U-shaped structure with two horizontal sections (a ventral and a dorsal one).") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0010402") AnnotationAssertion( "BTO:0000365") AnnotationAssertion( "CALOHA:TS-0214") @@ -47585,6 +55750,38 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (cerebellar cortex) + +AnnotationAssertion(Annotation( "BIRNLEX:1566") "The superficial gray matter of the cerebellum. It consists of three main layers, the molecular layer, the Purkinje cell layer and the granule cell layer.") +AnnotationAssertion( ) +AnnotationAssertion( "BAMS:CB") +AnnotationAssertion( "BAMS:CBX") +AnnotationAssertion( "BAMS:CbCx") +AnnotationAssertion( "BIRNLEX:1566") +AnnotationAssertion( "BM:CB-Cbx") +AnnotationAssertion( "BTO:0000043") +AnnotationAssertion( "CALOHA:TS-2000") +AnnotationAssertion( "DHBA:10657") +AnnotationAssertion( "DMBA:16939") +AnnotationAssertion( "EMAPA:35211") +AnnotationAssertion( "EV:0100294") +AnnotationAssertion( "FMA:72248") +AnnotationAssertion( "GAID:596") +AnnotationAssertion( "HBA:4697") +AnnotationAssertion( "MA:0000199") +AnnotationAssertion( "MBA:528") +AnnotationAssertion( "MESH:D002525") +AnnotationAssertion( "NCIT:C49216") +AnnotationAssertion( "SCTID:361593004") +AnnotationAssertion( "VHOG:0001597") +AnnotationAssertion( "Wikipedia:Cerebellar_cortex") +AnnotationAssertion(rdfs:comment "The circuits in the cerebellar cortex look similar across all classes of vertebrates, including fish, reptiles, birds, and mammals (e.g., Fig. 2). This has been taken as evidence that the cerebellum performs functions important to all vertebrate species. (Wikipedia)") +AnnotationAssertion(rdfs:label "cerebellar cortex") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (locus ceruleus) AnnotationAssertion(Annotation( "GAID:577") Annotation( "GO:0021703") Annotation( "Wikipedia:Locus_ceruleus") "The locus ceruleus is a dense cluster of neurons within the dorsorostral pons. This nucleus is the major location of neurons that release norepinephrine throughout the brain, and is responsible for physiological responses to stress and panic[GO]. Bluish region in the superior angle of the fourth ventricle floor, corresponding to melanin-like pigmented nerve cells which lie lateral to the ponto-mesencephalic central gray (griseum centrale). It is also known as nucleus pigmentosus pontis[GAID].") @@ -47740,6 +55937,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (pulmonary alveolar duct) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8") Annotation( "MGI:cwg") Annotation( "MP:0002271") "The respiratory conducting tubes distal to the respiratory bronchiole that lead to the alveolar sacs and the alveoli.") +AnnotationAssertion( ) AnnotationAssertion( "EMAPA:32694") AnnotationAssertion( "FMA:7341") AnnotationAssertion( "MA:0000417") @@ -47749,9 +55947,63 @@ AnnotationAssertion(rdfs:label " SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (lobar bronchus) + +AnnotationAssertion(Annotation( "GO:0060482") Annotation( "Wikipedia:Secondary_bronchus") "The lobar bronchus is the major airway within the respiratory tree that starts by division of the principal bronchi on both sides and ends at the point of its own subdivision into tertiary or segmental bronchi[GO].") +AnnotationAssertion( ) +AnnotationAssertion( "EHDAA:4955") +AnnotationAssertion( "EHDAA:4963") +AnnotationAssertion( "EHDAA:4977") +AnnotationAssertion( "EHDAA:4985") +AnnotationAssertion( "EHDAA:4993") +AnnotationAssertion( "EHDAA:8175") +AnnotationAssertion( "EHDAA:8187") +AnnotationAssertion( "EHDAA:8203") +AnnotationAssertion( "EHDAA:8213") +AnnotationAssertion( "EHDAA:8225") +AnnotationAssertion( "EMAPA:32696") +AnnotationAssertion( "FMA:7406") +AnnotationAssertion( "MA:0000437") +AnnotationAssertion( "NCIT:C32998") +AnnotationAssertion( "SCTID:245509008") +AnnotationAssertion( "Wikipedia:Secondary_bronchus") +AnnotationAssertion(rdfs:label "lobar bronchus") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (segmental bronchus) + +AnnotationAssertion(Annotation( "Wikipedia:Segmental_bronchus") "The tertiary bronchi (also known as the segmental bronchi) arise from the secondary bronchi. The respiratory epithelium lining their lumen is surrounded by a layer of smooth muscle. This layer is composed of two ribbons of smooth muscle that spiral in opposite directions. The smooth muscle layer is surrounded by irregular plates of hyaline cartilage which help maintain the patency of the airway. Each of the tertiary bronchi serves a specific bronchopulmonary segment. There are 10 tertiary bronchi in the right lung, and eight in the left. The tertiary bronchi get smaller and divide into primary bronchioles. [WP,unvetted].") +AnnotationAssertion( ) +AnnotationAssertion( "EHDAA:7043") +AnnotationAssertion( "EHDAA:7049") +AnnotationAssertion( "EHDAA:7058") +AnnotationAssertion( "EHDAA:7064") +AnnotationAssertion( "EHDAA:7070") +AnnotationAssertion( "FMA:7407") +AnnotationAssertion( "MA:0000439") +AnnotationAssertion( "NCIT:C33526") +AnnotationAssertion( "SCTID:245513001") +AnnotationAssertion( "VHOG:0001446") +AnnotationAssertion( "Wikipedia:Segmental_bronchus") +AnnotationAssertion(rdfs:label "segmental bronchus") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (bronchus) AnnotationAssertion(Annotation( "ISBN:0-397-51047-0") Annotation( "MESH:A04.411.125") Annotation( "MGI:cwg") Annotation( "MP:0002264") "The upper conducting airways of the lung; these airways arise from the terminus of the trachea.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0001340") AnnotationAssertion( "CALOHA:TS-1229") AnnotationAssertion( "EFO:0000932") @@ -47798,6 +56050,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (terminal bronchiole) AnnotationAssertion(Annotation( "ISBN:0-397-51047-0") Annotation( "MGI:cwg") Annotation( "MP:0002268") Annotation( "PMID:16543587") "A bronchiole that is part of a secondary pulmonary lobule and the last conducting structure of a non-respiratory bronchiole; after this point, the airways have alveoli in their walls.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0003223") AnnotationAssertion( "EMAPA:36282") AnnotationAssertion( "FMA:7411") @@ -47814,6 +56067,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (respiratory bronchiole) AnnotationAssertion(Annotation( "ISBN:0123813611") Annotation( "Wikipedia:Respiratory_bronchiole") "A bronchiole that is the first segment of the respiratory zone.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0003222") AnnotationAssertion( "EMAPA:35729") AnnotationAssertion( "FMA:7412") @@ -47831,6 +56085,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (subcutaneous adipose tissue) AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") "A portion of adipose tissue that is part of the hypodermis, beneath the dermis.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0004042") AnnotationAssertion( "EMAPA:35829") AnnotationAssertion( "FMA:74315") @@ -47852,11 +56107,12 @@ AnnotationAssertion( "MA:0000013") AnnotationAssertion(rdfs:label "hemolymphoid system") SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (integument) AnnotationAssertion(Annotation( "Wikipedia:Integument") "The dermis, epidermis and hypodermis.") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0000239") AnnotationAssertion( "BTO:0000634") AnnotationAssertion( "FMA:74657") @@ -47871,7 +56127,7 @@ SubClassOf( ObjectSomeValuesFrom( SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (vasculature of head) @@ -47900,6 +56156,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (submucosa of trachea) AnnotationAssertion(Annotation( "OBOL:automatic") "A submucosa that is part of a trachea.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0002115") AnnotationAssertion( "EMAPA:35879") AnnotationAssertion( "FMA:7472") @@ -47915,6 +56172,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (vasculature of eye) AnnotationAssertion(Annotation( "OBOL:automatic") Annotation( "https://sourceforge.net/tracker/?func=detail&aid=3489658&group_id=76834&atid=994726") "Vasculature that is part of the eye region.") +AnnotationAssertion( ) AnnotationAssertion( "FMA:74743") AnnotationAssertion( "SCTID:123846009") AnnotationAssertion( "TAO:0007057") @@ -47991,7 +56249,7 @@ AnnotationAssertion( "synovial joint") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) @@ -48015,6 +56273,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (spinal cord) AnnotationAssertion(Annotation( "BIRNLEX:1709") "Part of the central nervous system located in the vertebral canal continuous with and caudal to the brain; demarcated from brain by plane of foramen magnum. It is composed of an inner core of gray matter in which nerve cells predominate, and an outer layer of white matter in which myelinated nerve fibers predominate, and surrounds the central canal. (CUMBO).") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0010151") AnnotationAssertion( "BAMS:SP") AnnotationAssertion( "BAMS:Spinal") @@ -48092,6 +56351,21 @@ SubClassOf( ObjectSomeValuesFrom( SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (olfactory organ) + +AnnotationAssertion(Annotation( "UBERON:cjm") "An organ that houses olfactory neurons and is responsible for the sense of smell. Examples include the vertebrate nose and the Drosophila dorsal organ.") +AnnotationAssertion( "AAO:0010180") +AnnotationAssertion( "BTO:0001772") +AnnotationAssertion( "FMA:77659") +AnnotationAssertion( "VHOG:0000287") +AnnotationAssertion( "XAO:0000273") +AnnotationAssertion(rdfs:label "olfactory organ") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (reticular formation) AnnotationAssertion(Annotation( "NeuroNames:1223") "A composite substructure of the brainstem that consists of the midbrain reticular formation, the pontine reticular formation and the medullary reticular formation ( Carpenter-1983 ).") @@ -48108,6 +56382,66 @@ AnnotationAssertion(rdfs:label " SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (telencephalic ventricle) + +AnnotationAssertion(Annotation( "Wikipedia:Lateral_ventricle") Annotation( "https://orcid.org/0000-0002-6601-2165") "A brain ventricle that is part of a telencephalon. In mammals and species with an evaginated telencephalon, this is one of a pair of lateral structures, one in each hemisphere.") +AnnotationAssertion( ) +AnnotationAssertion( "BAMS:LV") +AnnotationAssertion( "BAMS:Tel-V") +AnnotationAssertion( "BIRNLEX:1263") +AnnotationAssertion( "BM:Tel-LV") +AnnotationAssertion( "BTO:0000879") +AnnotationAssertion( "CALOHA:TS-1230") +AnnotationAssertion( "DHBA:10596") +AnnotationAssertion( "DMBA:126651562") +AnnotationAssertion( "EFO:0001961") +AnnotationAssertion( "EHDAA2:0001984") +AnnotationAssertion( "EHDAA:3502") +AnnotationAssertion( "EHDAA:6576") +AnnotationAssertion( "EV:0100307") +AnnotationAssertion( "FMA:78448") +AnnotationAssertion( "GAID:611") +AnnotationAssertion( "HBA:9419") +AnnotationAssertion( "MA:0000192") +AnnotationAssertion( "MBA:81") +AnnotationAssertion( "MESH:D020547") +AnnotationAssertion( "NCIT:C12834") +AnnotationAssertion( "SCTID:180930008") +AnnotationAssertion( "TAO:0000696") +AnnotationAssertion( "VHOG:0000643") +AnnotationAssertion( "Wikipedia:Lateral_ventricle") +AnnotationAssertion( "ZFA:0000696") +AnnotationAssertion( "neuronames:209") +AnnotationAssertion(rdfs:comment "modeled as space in EHDAA2") +AnnotationAssertion(rdfs:label "telencephalic ventricle") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (choroid plexus of fourth ventricle) + +AnnotationAssertion(Annotation( "NLX:27388") "Choroid plexus of the fourth ventricle.") +AnnotationAssertion( "BAMS:chp4") +AnnotationAssertion( "BAMS:cp4v") +AnnotationAssertion( "DHBA:12808") +AnnotationAssertion( "EMAPA:32742") +AnnotationAssertion( "FMA:78492") +AnnotationAssertion( "HBA:9710") +AnnotationAssertion( "MA:0000983") +AnnotationAssertion( "NCIT:C32308") +AnnotationAssertion( "NLX:27388") +AnnotationAssertion( "SCTID:42214001") +AnnotationAssertion( "TAO:0001446") +AnnotationAssertion( "VHOG:0001375") +AnnotationAssertion( "ZFA:0001446") +AnnotationAssertion( "neuronames:638") +AnnotationAssertion(rdfs:label "choroid plexus of fourth ventricle") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (biliary system) AnnotationAssertion(Annotation( "Wikipedia:Biliary_system") "Organ system subdivision that consists of the organs and ducts that are involved in the production and transportation of bile. In most species this is the gallbladder and the bile ducts (biliary tree).") @@ -48133,26 +56467,6 @@ DisjointClasses( ) DisjointClasses( ) -# Class: (dorsal mesentery) - -AnnotationAssertion(Annotation( "Wikipedia:Dorsal_mesentery") Annotation( "Wikipedia:Mesentery#Development") Annotation( "ZFIN:curator") "The mesentery that originates from the dorsal side of the peritoneal cavity[ZFA].") -AnnotationAssertion( "EHDAA2:0004560") -AnnotationAssertion( "EHDAA:3019") -AnnotationAssertion( "EHDAA:3033") -AnnotationAssertion( "EHDAA:3921") -AnnotationAssertion( "EHDAA:3934") -AnnotationAssertion( "EHDAA:3957") -AnnotationAssertion( "EHDAA:3971") -AnnotationAssertion( "FMA:79795") -AnnotationAssertion( "SCTID:308823000") -AnnotationAssertion( "TAO:0005130") -AnnotationAssertion( "Wikipedia:Mesentery#Development") -AnnotationAssertion( "ZFA:0005130") -AnnotationAssertion(rdfs:label "dorsal mesentery") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (brainstem) AnnotationAssertion(Annotation( "ISBN:0471888893") Annotation( "MP:0005277") Annotation( "Wikipedia:Brainstem") Annotation( "ZFA:0001707") "Stalk-like part of the brain that includes amongst its parts the medulla oblongata of the hindbrain and the tegmentum of the midbrain[ZFA,MP,generalized].") @@ -48184,6 +56498,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (alveolus of lung) AnnotationAssertion(Annotation( "Wikipedia:Pulmonary_alveolus") "Spherical outcropping of the respiratory bronchioles and primary site of gas exchange with the blood. Alveoli are particular to mammalian lungs. Different structures are involved in gas exchange in other vertebrates[WP].") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0000060") AnnotationAssertion( "CALOHA:TS-0031") AnnotationAssertion( "EFO:0001985") @@ -48202,9 +56517,21 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (layer of neocortex) + +AnnotationAssertion(Annotation( "ISBN-10:0-87893-742-0") Annotation( "PMID:29081739") Annotation( "http://orcid.org/0000-0002-6601-2165") "One of the layers of the neocortex. These layers are defined by distinctive populations of cells based on somata size, shape, or density, that are aligned into sheets.") +AnnotationAssertion( "ABA:CTX1-6b") +AnnotationAssertion( "EMAPA:35588") +AnnotationAssertion( "FMA:83138") +AnnotationAssertion( "MA:0000186") +AnnotationAssertion(rdfs:label "layer of neocortex") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) + # Class: (myocardium of atrium) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8") Annotation( "MP:0010493") "The atrial part of middle layer of the heart, comprised of involuntary muscle.") @@ -48222,6 +56549,28 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (choroid plexus of lateral ventricle) + +AnnotationAssertion(Annotation( "NLX:32548") "Part of choroid plexus contained in the lateral ventricle.") +AnnotationAssertion( "BAMS:cplv") +AnnotationAssertion( "DHBA:10601") +AnnotationAssertion( "EHDAA2:0004449") +AnnotationAssertion( "EMAPA:17769") +AnnotationAssertion( "FMA:83711") +AnnotationAssertion( "HBA:9708") +AnnotationAssertion( "MA:0000961") +AnnotationAssertion( "NCIT:C32309") +AnnotationAssertion( "NLX:32548") +AnnotationAssertion( "SCTID:70064002") +AnnotationAssertion( "TAO:0001447") +AnnotationAssertion( "VHOG:0001376") +AnnotationAssertion( "ZFA:0001447") +AnnotationAssertion( "neuronames:218") +AnnotationAssertion(rdfs:label "choroid plexus of lateral ventricle") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (nucleus of brain) AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") "A neural nucleus that is part of the brain.") @@ -48254,6 +56603,46 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (white matter) + +AnnotationAssertion(Annotation( "Wikipedia:White_matter") Annotation( "https://orcid.org/0000-0002-6601-2165") "Neural tissue consisting of myelinated axons connecting grey matter areas of the central nervous system.") +AnnotationAssertion( "AEO:0000139") +AnnotationAssertion( "AEO:0001011") +AnnotationAssertion( "EMAPA:35927") +AnnotationAssertion( "FMA:83929") +AnnotationAssertion( "HBA:9218") +AnnotationAssertion( "MA:0001135") +AnnotationAssertion( "NCIT:C33892") +AnnotationAssertion( "NLX:412") +AnnotationAssertion( "NLXANAT:101177") +AnnotationAssertion( "PBA:294022044") +AnnotationAssertion( "TAO:0000145") +AnnotationAssertion( "TAO:0002142") +AnnotationAssertion( "TAO:0002143") +AnnotationAssertion( "VHOG:0001764") +AnnotationAssertion( "Wikipedia:White_matter") +AnnotationAssertion( "ZFA:0001682") +AnnotationAssertion( "neuronames:2870") +AnnotationAssertion(rdfs:label "white matter") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (white matter of spinal cord) + +AnnotationAssertion(Annotation( "MP:0008027") "The regions of the spinal cord that are largely or entirely composed of myelinated nerve cell axons and contain few or no neural cell bodies or dendrites.") +AnnotationAssertion( "BAMS:SCwhite") +AnnotationAssertion( "DHBA:146035088") +AnnotationAssertion( "EMAPA:35795") +AnnotationAssertion( "FMA:83945") +AnnotationAssertion( "MA:0000910") +AnnotationAssertion( "NCIT:C33893") +AnnotationAssertion( "SCTID:279436006") +AnnotationAssertion(rdfs:label "white matter of spinal cord") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (coelemic cavity lumen) AnnotationAssertion(Annotation( "BTO:0001707") "The cavity within the body of all animals higher than the coelenterates and certain primitive worms, formed by the splitting of the embryonic mesoderm into two layers. In mammals it forms the peritoneal, pleural, and pericardial cavities.") @@ -48265,7 +56654,6 @@ AnnotationAssertion( "RETIRED_EHDAA2:0003186") AnnotationAssertion( "SCTID:361348008") AnnotationAssertion( "TAO:0001438") -AnnotationAssertion( "ZFA:0001438") AnnotationAssertion( "galen:BodyCavity") AnnotationAssertion(rdfs:comment "EDITOR_NOTE check the FMA placement here; ncit placement of body cavity here probably not correct") AnnotationAssertion(rdfs:label "coelemic cavity lumen") @@ -48276,6 +56664,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (muscle of back) AnnotationAssertion(Annotation( "OBOL:automatic") "Any muscle organ that is part of a back [Automatically generated definition].") +AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35161") AnnotationAssertion( "FMA:85216") AnnotationAssertion( "MA:0000496") @@ -48318,7 +56707,7 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -48349,7 +56738,7 @@ AnnotationAssertion(rdfs:comment AnnotationAssertion(rdfs:label "somite") SubClassOf( ) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (exocrine system) @@ -48365,7 +56754,7 @@ AnnotationAssertion( "WikipediaCategory:Exocrine_system") AnnotationAssertion(rdfs:label "exocrine system") SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) @@ -48378,6 +56767,7 @@ DisjointClasses( (pulmonary trunk) AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") "An arterial trunk which is continuous with the heart and branches into the pulmonary arteries.") +AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001576") AnnotationAssertion( "EHDAA:9831") AnnotationAssertion( "EMAPA:17015") @@ -48405,6 +56795,42 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (epithelium of lobar bronchus) + +AnnotationAssertion(Annotation( "GO:0060481") "The tissue made up of epithelial cells that lines the inside of the lobar bronchus.") +AnnotationAssertion( ) +AnnotationAssertion( "EMAPA:32695") +AnnotationAssertion( "FMA:86624") +AnnotationAssertion( "MA:0001842") +AnnotationAssertion(rdfs:label "epithelium of lobar bronchus") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (epithelium of segmental bronchus) + +AnnotationAssertion(Annotation( "OBOL:automatic") "An epithelium that is part of a segmental bronchus [Automatically generated definition].") +AnnotationAssertion( ) +AnnotationAssertion( "FMA:86626") +AnnotationAssertion( "MA:0001850") +AnnotationAssertion(rdfs:label "epithelium of segmental bronchus") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (neural crest) AnnotationAssertion(Annotation( "MP:0009846") "A specialized region of ectoderm found between the neural ectoderm (neural plate) and non-neural ectoderm and composed of highly migratory pluripotent cells that delaminate in early embryonic development from the dorsal neural tube and give rise to an astounding variety of differentiated cell types[MP].") @@ -48431,7 +56857,7 @@ SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -48452,6 +56878,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (descending thoracic aorta) AnnotationAssertion(Annotation( "MP:0009868") "The part of the aorta that extends from the arch of the aorta to the diaphragm, and from which arises numerous branches that supply oxygenated blood to the chest cage and the organs within the chest.") +AnnotationAssertion( ) AnnotationAssertion( "EFO:0002527") AnnotationAssertion( "EMAPA:18605") AnnotationAssertion( "FMA:87217") @@ -48493,6 +56920,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (thoracic vertebra) AnnotationAssertion(Annotation( "OBOL:automatic") "A thoracic vertebra endochondral element that is composed primarily of a bone tissue.") +AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18011") AnnotationAssertion( "FMA:9139") AnnotationAssertion( "GAID:244") @@ -48512,6 +56940,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (epicardium) AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") "A region of the serous membrane that forms the innermost layer of the pericardium and the outer surface of the heart.") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0010409") AnnotationAssertion( "EHDAA2:0002202") AnnotationAssertion( "FMA:9461") @@ -48591,6 +57020,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (sinoatrial node) AnnotationAssertion(Annotation( "GO:0003163") Annotation( "Wikipedia:Sinoatrial_node") "The part of the cardiac conduction system that controls the timing of heart muscle contraction. It relays electrical signals to the AV node[GO]. Subdivision of conducting system of heart at the junction of the right atrium and the superior vena cava, around the sinoatrial nodal branch of right coronary artery and is continuous with the internodal tract[FMA].") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0004358") AnnotationAssertion( "EHDAA2:0004184") AnnotationAssertion( "EMAPA:35772") @@ -48616,6 +57046,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (atrioventricular node) AnnotationAssertion(Annotation( "UBERON:cjm") Annotation( "Wikipedia:Atrioventricular_node") "An area of conducting tissue between the atria and the ventricles of the heart that conducts the normal electrical impulse from the atria to the ventricles.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0005689") AnnotationAssertion( "EFO:0000276") AnnotationAssertion( "EHDAA2:0004183") @@ -48712,6 +57143,83 @@ SubClassOf( ObjectSomeValuesFrom( SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (meninx) + +AnnotationAssertion(Annotation( "FMA:9589") Annotation( "Wikipedia:Meninx") Annotation( "http://www.shsu.edu/~bio_mlt/Chap15.html") "Membrane organ that surrounds the brain and the spinal cord.") +AnnotationAssertion( "BTO:0000144") +AnnotationAssertion( "CALOHA:TS-1177") +AnnotationAssertion( "EFO:0000867") +AnnotationAssertion( "EMAPA:32660") +AnnotationAssertion( "FMA:9589") +AnnotationAssertion( "GAID:687") +AnnotationAssertion( "MA:0001113") +AnnotationAssertion( "MAT:0000113") +AnnotationAssertion( "MESH:D008578") +AnnotationAssertion( "NCIT:C12348") +AnnotationAssertion( "NLXANAT:090204") +AnnotationAssertion( "TAO:0001355") +AnnotationAssertion( "VHOG:0001295") +AnnotationAssertion( "Wikipedia:Meninx") +AnnotationAssertion( "ZFA:0001355") +AnnotationAssertion(rdfs:label "meninx") +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (pia mater) + +AnnotationAssertion(Annotation( "NLXANAT:090209") "The innermost layer of the leptomeninges, consisting of a delicate membrane closely covering the surface of the brain and spinal cord,and lying under the arachnoid membrane. The pia, unlike the arachnoid, extends into the sulci in gyrencephalic animals.") +AnnotationAssertion( "BTO:0001635") +AnnotationAssertion( "EHDAA2:0004318") +AnnotationAssertion( "EHDAA:1367") +AnnotationAssertion( "EHDAA:1961") +AnnotationAssertion( "EHDAA:2001") +AnnotationAssertion( "EHDAA:2099") +AnnotationAssertion( "EHDAA:2685") +AnnotationAssertion( "EHDAA:2833") +AnnotationAssertion( "EHDAA:2867") +AnnotationAssertion( "EHDAA:3692") +AnnotationAssertion( "EHDAA:3710") +AnnotationAssertion( "EHDAA:6566") +AnnotationAssertion( "EHDAA:6583") +AnnotationAssertion( "EMAPA:32663") +AnnotationAssertion( "FMA:9590") +AnnotationAssertion( "GAID:693") +AnnotationAssertion( "MA:0001116") +AnnotationAssertion( "MESH:D010841") +AnnotationAssertion( "NCIT:C33321") +AnnotationAssertion( "NLXANAT:090209") +AnnotationAssertion( "RETIRED_EHDAA2:0001464") +AnnotationAssertion( "SCTID:362305004") +AnnotationAssertion( "Wikipedia:Pia_mater") +AnnotationAssertion( "neuronames:1463") +AnnotationAssertion(rdfs:label "pia mater") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (arachnoid mater) + +AnnotationAssertion(Annotation( "ISBN:0471888893") Annotation( "Wikipedia:Arachnoid_mater") "A think avascular meningeal layer, between the pia mater and the dural mater. It is separated from the pia mater by the subarachnoid space.") +AnnotationAssertion( "BTO:0001636") +AnnotationAssertion( "CALOHA:TS-0052") +AnnotationAssertion( "EMAPA:32659") +AnnotationAssertion( "EV:0100314") +AnnotationAssertion( "FMA:9591") +AnnotationAssertion( "GAID:688") +AnnotationAssertion( "MA:0001114") +AnnotationAssertion( "MESH:D001099") +AnnotationAssertion( "NCIT:C32136") +AnnotationAssertion( "NLXANAT:090208") +AnnotationAssertion( "SCTID:362304000") +AnnotationAssertion( "Wikipedia:Arachnoid_mater") +AnnotationAssertion( "neuronames:1464") +AnnotationAssertion(rdfs:label "arachnoid mater") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (exocrine gland) AnnotationAssertion(Annotation( "Wikipedia:Exocrine_gland") "A gland that secretes products (excluding hormones and other chemical messengers) into ducts (duct glands) which lead directly into the external environment[WP]. Typical exocrine glands include sweat glands, salivary glands, mammary glands, stomach, liver, pancreas.") @@ -48757,6 +57265,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (bone marrow) AnnotationAssertion(Annotation( "MGI:cwg") Annotation( "MP:0002397") "The soft tissue that fills the cavities of bones.") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0011007") AnnotationAssertion( "BTO:0000141") AnnotationAssertion( "BTO:0000829") @@ -48789,6 +57298,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (cranial muscle) AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") "Any skeletal muscle that is part of the head region.") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0000107") AnnotationAssertion( "BTO:0000021") AnnotationAssertion( "EFO:0003524") @@ -48810,6 +57320,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (muscle of neck) AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") "Any muscle that is part of the cervical (neck) region.") +AnnotationAssertion( ) AnnotationAssertion( "FMA:9617") AnnotationAssertion( "GAID:149") AnnotationAssertion( "MA:0000587") @@ -48823,6 +57334,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (muscle of abdomen) AnnotationAssertion(Annotation( "Wikipedia:Abdominal_muscle") "Muscle (organ) which is a part of the abdomen. Examples: external oblique, rectus abdominis.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0001261") AnnotationAssertion( "EMAPA:35103") AnnotationAssertion( "FMA:9620") @@ -48842,6 +57354,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (connective tissue) AnnotationAssertion(Annotation( "GO_REF:0000034") Annotation( "PSPUB:0000170") Annotation( "VSAO:0000017") Annotation( "http://dx.plos.org/10.1371/journal.pone.0051070") Annotation( "https://github.com/obophenotype/uberon/issues/23") "Tissue with cells that deposit non-polarized extracellular matrix including connective tissue fibers and ground substance.") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0000098") AnnotationAssertion( "BTO:0000421") AnnotationAssertion( "CALOHA:TS-2009") @@ -48862,7 +57375,7 @@ AnnotationAssertion( "galen:ConnectiveTissue") AnnotationAssertion(rdfs:label "connective tissue") SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (muscle tissue) @@ -48885,7 +57398,7 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) @@ -48893,6 +57406,7 @@ DisjointClasses( (hematopoietic system) AnnotationAssertion(Annotation( "Wikipedia:Haematopoiesis") "Anatomical system that is involved in the production of hematopoietic cells.") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0011002") AnnotationAssertion( "BTO:0000570") AnnotationAssertion( "CALOHA:TS-0449") @@ -48916,7 +57430,7 @@ AnnotationAssertion(rdfs:label " SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) DisjointClasses( ) @@ -48956,6 +57470,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (vomer) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8") Annotation( "MP:0000098") "The triangular flat bone of the nasal septum.") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0000633") AnnotationAssertion( "FMA:9710") AnnotationAssertion( "MA:0001496") @@ -48994,6 +57509,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (visceral pleura) AnnotationAssertion(Annotation( "UBERON:cjm") Annotation( "Wikipedia:Pulmonary_pleurae") "The inner serous membrane of the pulmonary pleural. The visceral pleura lines the lungs.") +AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0002205") AnnotationAssertion( "EMAPA:16777") AnnotationAssertion( "FMA:9734") @@ -49037,6 +57553,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (immune system) AnnotationAssertion(Annotation( "Wikipedia:Immune_system") "Anatomical system that protects the body from foreign substances, cells, and tissues by producing the immune response and that includes especially the thymus, spleen, lymphoid tissue, lymphocytes including the B cells and T cells, and antibodies.") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0011003") AnnotationAssertion( "BILA:0000104") AnnotationAssertion( "BTO:0005810") @@ -49079,6 +57596,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (pericardium) AnnotationAssertion(Annotation( "Wikipedia:Pericardium") Annotation( "http://orcid.org/0000-0002-6601-2165") "The combination of pericardial sac (a double-walled sac containing the heart and the roots of the great vessels) plus fibrous pericardium.") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0010817") AnnotationAssertion( "BSA:0000090") AnnotationAssertion( "BTO:0000717") @@ -49162,7 +57680,7 @@ AnnotationAssertion( "autonomic nervous system") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (vertebra) @@ -49192,6 +57710,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (cervical vertebra) AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") "A vertebra that is located in the cervical region of the vertebral column.") +AnnotationAssertion( ) AnnotationAssertion( "EMAPA:17674") AnnotationAssertion( "FMA:9915") AnnotationAssertion( "GAID:235") @@ -49227,11 +57746,12 @@ AnnotationAssertion( "tail") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (integumental system) AnnotationAssertion(Annotation( "CARO:0002001") Annotation( "http://orcid.org/0000-0002-6601-2165") Annotation( "https://github.com/obophenotype/uberon/issues/29") "Connected anatomical system that forms a barrier between an animal and its environment. In vertebrates, the integumental system consists of the epidermis, dermis plus associated glands and adnexa such as hair and scales. In invertebrates, the integumental system may include cuticle.") +AnnotationAssertion( ) AnnotationAssertion( "AEO:0000154") AnnotationAssertion( "BILA:0000118") AnnotationAssertion( "CALOHA:TS-1299") @@ -49308,7 +57828,7 @@ AnnotationAssertion(rdfs:label " SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (skin gland) @@ -49325,6 +57845,45 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (fourth ventricle) + +AnnotationAssertion(Annotation( "BIRNLEX:1256") "Part of the ventricular system of the brain, forming a single large irregularly shaped cavity located on the midline of the rhombencephalon, between the medulla, pons and the isthmus ventrally and the cerebellum dorsally. It is continuous with the cerebral aqueduct anteriorally and the central canal of the spinal cord posteriorly. It communicates with the subarachnoid space through its lateral and median apertures.") +AnnotationAssertion( ) +AnnotationAssertion( "AAO:0011043") +AnnotationAssertion( "BAMS:4V") +AnnotationAssertion( "BAMS:V4") +AnnotationAssertion( "BIRNLEX:1256") +AnnotationAssertion( "BM:Pons-4V") +AnnotationAssertion( "BTO:0003426") +AnnotationAssertion( "CALOHA:TS-2015") +AnnotationAssertion( "DHBA:10669") +AnnotationAssertion( "DHBA:12805") +AnnotationAssertion( "DMBA:126651782") +AnnotationAssertion( "EHDAA2:0000100") +AnnotationAssertion( "EHDAA:896") +AnnotationAssertion( "EMAPA:16917") +AnnotationAssertion( "EV:0100310") +AnnotationAssertion( "FMA:78469") +AnnotationAssertion( "GAID:610") +AnnotationAssertion( "HBA:9421") +AnnotationAssertion( "MA:0000196") +AnnotationAssertion( "MBA:145") +AnnotationAssertion( "MESH:D020546") +AnnotationAssertion( "NCIT:C12828") +AnnotationAssertion( "SCTID:180932000") +AnnotationAssertion( "TAO:0000110") +AnnotationAssertion( "VHOG:0000006") +AnnotationAssertion( "Wikipedia:Fourth_ventricle") +AnnotationAssertion( "XAO:0003099") +AnnotationAssertion( "ZFA:0000110") +AnnotationAssertion( "neuronames:621") +AnnotationAssertion(rdfs:label "fourth ventricle") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (hepatobiliary system) AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") "The part of the digestive system that contains the liver and the biliary system.") @@ -49349,7 +57908,7 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) @@ -49396,6 +57955,25 @@ SubClassOf( ObjectSomeValuesFrom( SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (cerebral hemisphere white matter) + +AnnotationAssertion(Annotation( "https://orcid.org/0000-0002-6601-2165") "White matter that is part of a cerebral hemisphere.") +AnnotationAssertion( "BAMS:cw") +AnnotationAssertion( "BIRNLEX:711") +AnnotationAssertion( "BTO:0000236") +AnnotationAssertion( "CALOHA:TS-2362") +AnnotationAssertion( "EMAPA:35237") +AnnotationAssertion( "FMA:241998") +AnnotationAssertion( "FMA:256174") +AnnotationAssertion( "FMA:61822") +AnnotationAssertion( "MA:0000945") +AnnotationAssertion( "NCIT:C49347") +AnnotationAssertion( "SCTID:361691006") +AnnotationAssertion(rdfs:label "cerebral hemisphere white matter") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (choroidal blood vessel) AnnotationAssertion(Annotation( "OBOL:automatic") "A blood vessel that is part of a choroid [Automatically generated definition].") @@ -49488,12 +58066,13 @@ AnnotationAssertion( "bone tissue") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) # Class: (iris epithelium) AnnotationAssertion(Annotation( "OBOL:automatic") "An epithelium that is part of a iris [Automatically generated definition].") +AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35447") AnnotationAssertion( "FMA:58517") AnnotationAssertion( "MA:0002826") @@ -49644,7 +58223,7 @@ AnnotationAssertion( "galen:Gland") AnnotationAssertion(rdfs:label "gland") SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -49678,7 +58257,7 @@ AnnotationAssertion( "ZFA:0000077") AnnotationAssertion(rdfs:label "post-anal tail bud") SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (arthropod sensillum) @@ -49693,7 +58272,7 @@ AnnotationAssertion( "arthropod sensillum") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (pharyngeal arch) @@ -49720,8 +58299,8 @@ SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cranial placode) @@ -49735,7 +58314,7 @@ AnnotationAssertion( "cranial placode") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (anatomical cavity) @@ -49785,6 +58364,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (cervical spinal cord) AnnotationAssertion(Annotation( "OBOL:automatic") "A spinal cord segment that adjacent_to a cervical region.") +AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1499") AnnotationAssertion( "FMA:71166") AnnotationAssertion( "MA:0003081") @@ -49794,9 +58374,128 @@ AnnotationAssertion( "cervical spinal cord") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (regional part of cerebellar cortex) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A regional part of brain that is part of a cerebellar cortex [Automatically generated definition].") +AnnotationAssertion( "BIRNLEX:1571") +AnnotationAssertion( "FMA:76924") +AnnotationAssertion(rdfs:label "regional part of cerebellar cortex") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (left parietal lobe) + +AnnotationAssertion(Annotation( "BIRNLEX:1728") "Parietal lobe of the left hemisphere of the brain.") +AnnotationAssertion( "BIRNLEX:1728") +AnnotationAssertion( "FMA:72974") +AnnotationAssertion( "SCTID:314147009") +AnnotationAssertion(rdfs:label "left parietal lobe") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (right parietal lobe) + +AnnotationAssertion(Annotation( "BIRNLEX:1729") "Parietal lobe of the right hemisphere of the brain.") +AnnotationAssertion( "BIRNLEX:1729") +AnnotationAssertion( "FMA:72973") +AnnotationAssertion( "SCTID:314146000") +AnnotationAssertion(rdfs:label "right parietal lobe") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (left temporal lobe) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A temporal lobe that is part of a left cerebral hemisphere.") +AnnotationAssertion( "BIRNLEX:1784") +AnnotationAssertion( "FMA:72972") +AnnotationAssertion( "SCTID:314158000") +AnnotationAssertion(rdfs:label "left temporal lobe") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (right temporal lobe) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A temporal lobe that is part of a right cerebral hemisphere.") +AnnotationAssertion( "BIRNLEX:1785") +AnnotationAssertion( "FMA:72971") +AnnotationAssertion( "SCTID:314157005") +AnnotationAssertion(rdfs:label "right temporal lobe") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (right frontal lobe) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A frontal cortex that is part of a right cerebral hemisphere.") +AnnotationAssertion( "BIRNLEX:1786") +AnnotationAssertion( "FMA:72969") +AnnotationAssertion( "SCTID:314141005") +AnnotationAssertion(rdfs:label "right frontal lobe") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (left frontal lobe) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A frontal cortex that is part of a left cerebral hemisphere.") +AnnotationAssertion( "BIRNLEX:1787") +AnnotationAssertion( "FMA:72970") +AnnotationAssertion( "SCTID:314142003") +AnnotationAssertion(rdfs:label "left frontal lobe") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (left cerebral hemisphere) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A cerebral hemisphere that is in the left side of a brain.") +AnnotationAssertion( "BIRNLEX:1795") +AnnotationAssertion( "FMA:61819") +AnnotationAssertion( "NCIT:C32955") +AnnotationAssertion( "SCTID:362323007") +AnnotationAssertion(rdfs:label "left cerebral hemisphere") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (right cerebral hemisphere) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A cerebral hemisphere that is in the right side of a brain.") +AnnotationAssertion( "BIRNLEX:1797") +AnnotationAssertion( "FMA:67292") +AnnotationAssertion( "NCIT:C33472") +AnnotationAssertion( "SCTID:362322002") +AnnotationAssertion(rdfs:label "right cerebral hemisphere") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (longitudinal fissure) + +AnnotationAssertion(Annotation( "Wikipedia:Medial_longitudinal_fissure") "The deep groove which separates the two hemispheres of the vertebrate brain. The falx cerebri, a dural brain covering, lies within the medial longitudinal fissure. [WP,unvetted].") +AnnotationAssertion( "BAMS:lf") +AnnotationAssertion( "BAMS:lfh") +AnnotationAssertion( "BIRNLEX:4041") +AnnotationAssertion( "DHBA:10622") +AnnotationAssertion( "FMA:83727") +AnnotationAssertion( "HBA:9401") +AnnotationAssertion( "NCIT:C33005") +AnnotationAssertion( "SCTID:369225004") +AnnotationAssertion( "Wikipedia:Medial_longitudinal_fissure") +AnnotationAssertion(rdfs:label "longitudinal fissure") +SubClassOf( ) + # Class: (trigeminal nucleus) AnnotationAssertion(Annotation( "OBOL:automatic") "A nucleus of brain that is part of a trigeminal nuclear complex.") @@ -49819,9 +58518,40 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (gustatory epithelium) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A sensory epithelium that is part of a gustatory system.") +AnnotationAssertion( "FMA:62412") +AnnotationAssertion( "http://uri.neuinfo.org/nif/nifstd/nifext_12") +AnnotationAssertion(rdfs:label "gustatory epithelium") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (granular layer of cerebellar cortex) + +AnnotationAssertion(Annotation( "GO:0021681") "The granular layer is the innermost layer of the cerebellar cortex. This layer contains densely packed small neurons, mostly granule cells. Some Golgi cells are found at the outer border. Granule neurons send parallel fibers to the upper molecular layer, where they synapse with Purkinje cell dendrites. Mossy fibers from the pontine nuclei in the white matter synapse with granule cell axons, Golgi cell axons and unipolar brush interneuron axons at cerebellar glomeruli in the granule cell layer.") +AnnotationAssertion( "BIRNLEX:779") +AnnotationAssertion( "BTO:0004425") +AnnotationAssertion( "CALOHA:TS-1247") +AnnotationAssertion( "EMAPA:35217") +AnnotationAssertion( "FMA:83140") +AnnotationAssertion( "MA:0000993") +AnnotationAssertion( "MBA:1143") +AnnotationAssertion( "NCIT:C49138") +AnnotationAssertion(rdfs:label "granular layer of cerebellar cortex") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (pontine tegmentum) AnnotationAssertion(Annotation( "BIRNLEX:923") "Dorsal portion of the pons, containing cranial nervee nuclei, ascending and descending tracts and reticular nuclei. It is continuous with the reticular formation of the medulla (Carpenter, A Core Text of Neuroanatomy, 3rd ed, 1985, pg 133).") +AnnotationAssertion( ) AnnotationAssertion( "BAMS:PTg") AnnotationAssertion( "BIRNLEX:923") AnnotationAssertion( "DHBA:12416") @@ -49852,6 +58582,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (thoracic spinal cord) AnnotationAssertion(Annotation( "Wikipedia:Thoracic_spinal_cord") "The thoracic nerves are the spinal nerves emerging from the thoracic vertebrae. [WP,unvetted].") +AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:966") AnnotationAssertion( "FMA:71167") AnnotationAssertion( "MA:0003082") @@ -49864,6 +58595,62 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (trigeminal nerve fibers) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A nerve fiber that is part of a trigeminal nerve.") +AnnotationAssertion( "BAMS:5nf") +AnnotationAssertion( "BIRNLEX:974") +AnnotationAssertion( "FMA:72501") +AnnotationAssertion(rdfs:label "trigeminal nerve fibers") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (olfactory placode) + +AnnotationAssertion(Annotation( "Wikipedia:Nasal_placode") Annotation( "XAO:0000005") "A thick plate of cells derived from the neural ectoderm in the head region of the embryo that develops into the olfactory region of the nasal cavity.") +AnnotationAssertion( "AAO:0011076") +AnnotationAssertion( "EFO:0003420") +AnnotationAssertion( "EHDAA2:0001232") +AnnotationAssertion( "EHDAA:1504") +AnnotationAssertion( "EMAPA:16543") +AnnotationAssertion( "FMA:293971") +AnnotationAssertion( "TAO:0000048") +AnnotationAssertion( "VHOG:0000186") +AnnotationAssertion( "Wikipedia:Nasal_placode") +AnnotationAssertion( "XAO:0000005") +AnnotationAssertion( "ZFA:0000048") +AnnotationAssertion(rdfs:comment "Olfactory placodes are the only ectodermal placodes to produce glia, a cell type typically derived from neural crest // Note that NBK53171 classifies this as non-neurogenic") +AnnotationAssertion(rdfs:label "olfactory placode") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (ear vesicle) + +AnnotationAssertion(Annotation( "MP:0009806") Annotation( "Wikipedia:Otic_vesicle") "An epithelial sac of invaginated ectoderm formed from the otic placode that gives rise to the structures of the inner ear[MP].") +AnnotationAssertion( "AAO:0011080") +AnnotationAssertion( "BTO:0002661") +AnnotationAssertion( "EHDAA2:0001342") +AnnotationAssertion( "EMAPA:16669") +AnnotationAssertion( "FMA:302920") +AnnotationAssertion( "NCIT:C34240") +AnnotationAssertion( "SCTID:308792006") +AnnotationAssertion( "TAO:0000051") +AnnotationAssertion( "VHOG:0001148") +AnnotationAssertion( "Wikipedia:Otic_vesicle") +AnnotationAssertion( "XAO:0000006") +AnnotationAssertion( "ZFA:0000051") +AnnotationAssertion(rdfs:label "ear vesicle") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (midbrain-hindbrain boundary) AnnotationAssertion(Annotation( "GO:0021555") "The part of the brain that is the morphological boundary between the midbrain and hindbrain and that is the location of an organizing center which patterns the midbrain and hindbrain primordia of the neural plate.") @@ -50004,6 +58791,24 @@ SubClassOf( ObjectSomeValuesFrom( SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (pharyngeal arch 2) + +AnnotationAssertion(Annotation( "PMID:12784288") Annotation( "ZFIN:yb") Annotation( "https://github.com/obophenotype/uberon/issues/258") "The second pharyngeal arch will form the hyoid apparatus. The cranial neural crest cells that populate the second pharyngeal arch emerge primarily from rhombomere 4 and will form skeletal elements.") +AnnotationAssertion( "AAO:0010363") +AnnotationAssertion( "EHDAA2:0000050") +AnnotationAssertion( "EHDAA:611") +AnnotationAssertion( "EMAPA:16272") +AnnotationAssertion( "FMA:293017") +AnnotationAssertion( "NCIT:C34288") +AnnotationAssertion( "SCTID:308768003") +AnnotationAssertion( "TAO:0001596") +AnnotationAssertion( "VHOG:0000297") +AnnotationAssertion( "Wikipedia:Second_pharyngeal_arch") +AnnotationAssertion( "XAO:0000098") +AnnotationAssertion( "ZFA:0001611") +AnnotationAssertion(rdfs:label "pharyngeal arch 2") +SubClassOf( ) + # Class: (dorsolateral placode) AnnotationAssertion(Annotation( "ZFIN:curator") "Lateral neurogenic placodes positioned dorsal of the epibranchial placodes.") @@ -50029,9 +58834,28 @@ AnnotationAssertion( "axial mesoderm") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (otic placode) + +AnnotationAssertion(Annotation( "NCBIBook:NBK53175") Annotation( "Wikipedia:Otic_placode") "A cranial placode which, once specified, invaginates to form an otic cup, which eventually separates from the surface ectoderm to form the otic vesicle or otocyst, a rounded structure without appar- ent polarity. As the otic placode invaginates into a cup neuroblasts delaminate from the anterior ventral aspect of the otic epithelium to give rise to neurons of the vestibulocochlear (statoacoustic) ganglion of cranial nerve VIII[NBK].") +AnnotationAssertion( "AAO:0011079") +AnnotationAssertion( "EFO:0003429") +AnnotationAssertion( "EHDAA2:0001339") +AnnotationAssertion( "EHDAA:506") +AnnotationAssertion( "EMAPA:16195") +AnnotationAssertion( "FMA:293973") +AnnotationAssertion( "NCIT:C34239") +AnnotationAssertion( "TAO:0000138") +AnnotationAssertion( "VHOG:0000235") +AnnotationAssertion( "Wikipedia:Otic_placode") +AnnotationAssertion( "XAO:0000223") +AnnotationAssertion( "ZFA:0000138") +AnnotationAssertion(rdfs:label "otic placode") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (trigeminal placode complex) AnnotationAssertion(Annotation( "PMID:22512454") Annotation( "http://orcid.org/0000-0002-6601-2165") Annotation( "https://github.com/obophenotype/uberon/issues/693") "A neurogenic placode that arises at the level of the midbrain-hindbrain boundary and develops into a trigeminal ganglion.") @@ -50133,7 +58957,7 @@ AnnotationAssertion(rdfs:label " SubClassOf( ) SubClassOf( ) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -50221,7 +59045,7 @@ SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (myotome) @@ -50317,7 +59141,7 @@ AnnotationAssertion( "sclerotome") SubClassOf( ) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cranial neural crest) @@ -50407,7 +59231,7 @@ AnnotationAssertion( "mesenchyme") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -50437,7 +59261,23 @@ AnnotationAssertion( "dermatocranium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (pharyngeal arch 3) + +AnnotationAssertion(Annotation( "MP:0006339") "The third branchial arch contributes to the development of the hyoid bone, stylopharyngeus muscle, inferior parathyroid gland, and thymus.") +AnnotationAssertion( "AAO:0010365") +AnnotationAssertion( "EHDAA2:0000069") +AnnotationAssertion( "EHDAA:1080") +AnnotationAssertion( "EMAPA:16399") +AnnotationAssertion( "FMA:293029") +AnnotationAssertion( "SCTID:308769006") +AnnotationAssertion( "TAO:0001598") +AnnotationAssertion( "VHOG:0000298") +AnnotationAssertion( "XAO:0000447") +AnnotationAssertion( "ZFA:0001606") +AnnotationAssertion(rdfs:label "pharyngeal arch 3") +SubClassOf( ) # Class: (pharyngeal arch 4) @@ -50488,6 +59328,43 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (pharyngeal arch artery 2) + +AnnotationAssertion(Annotation( "MP:0010356") "The vessels formed within the second pair of branchial arches in embryogenesis.") +AnnotationAssertion( "AAO:0010418") +AnnotationAssertion( "EHDAA2:0000051") +AnnotationAssertion( "EMAPA:16203") +AnnotationAssertion( "EMAPA:16686") +AnnotationAssertion( "SCTID:308775002") +AnnotationAssertion( "TAO:0005006") +AnnotationAssertion( "VHOG:0000148") +AnnotationAssertion( "Wikipedia:Aortic_arches#Arches_1_and_2") +AnnotationAssertion( "XAO:0000343") +AnnotationAssertion( "ZFA:0005006") +AnnotationAssertion(rdfs:label "pharyngeal arch artery 2") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (pharyngeal arch artery 3) + +AnnotationAssertion(Annotation( "MP:0006356") "The vessels formed within the third pair of branchial arches in embryogenesis.") +AnnotationAssertion( "AAO:0010419") +AnnotationAssertion( "EHDAA2:0000070") +AnnotationAssertion( "EMAPA:16687") +AnnotationAssertion( "SCTID:308776001") +AnnotationAssertion( "TAO:0005007") +AnnotationAssertion( "VHOG:0000147") +AnnotationAssertion( "Wikipedia:Aortic_arches#Arch_3") +AnnotationAssertion( "XAO:0000344") +AnnotationAssertion( "ZFA:0005007") +AnnotationAssertion(rdfs:label "pharyngeal arch artery 3") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (pharyngeal arch artery 4) AnnotationAssertion(Annotation( "MP:0006354") "The vessels formed within the fourth pair of branchial arches in embryogenesis.") @@ -50525,6 +59402,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (trachea) AnnotationAssertion(Annotation( "GO:0060438") Annotation( "Wikipedia:Vertebrate_trachea") "The trachea is the portion of the airway that attaches to the bronchi as it branches [GO:dph].") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0010140") AnnotationAssertion( "BTO:0001388") AnnotationAssertion( "CALOHA:TS-1060") @@ -50548,13 +59426,14 @@ AnnotationAssertion(rdfs:label " SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (cranium) AnnotationAssertion(Annotation( "Wikipedia:Cranium_(anatomy)") Annotation( "http://orcid.org/0000-0002-6601-2165") "Upper portion of the skull that excludes the mandible (when present in the organism).") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0001328") AnnotationAssertion( "EFO:0000831") AnnotationAssertion( "EHDAA:6029") @@ -50590,7 +59469,7 @@ SubClassOf( ObjectSomeValuesFrom( SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (reproductive organ) @@ -50617,6 +59496,16 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (gustatory organ) + +AnnotationAssertion(Annotation( "FBC:auto_generated_definition") "Any sense organ that functions in (some) detection of chemical stimulus involved in sensory perception of taste (GO:0050912).") +AnnotationAssertion( "FMA:77853") +AnnotationAssertion(rdfs:label "gustatory organ") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (alveolus) AnnotationAssertion(Annotation( "Wikipedia:Alveolus") "Organ part that has the form of a hollow cavity[WP].") @@ -50658,6 +59547,21 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (epithelium of otic placode) + +AnnotationAssertion(Annotation( "OBOL:automatic") "An epithelium that is part of a otic placode [Automatically generated definition].") +AnnotationAssertion( "EHDAA2:0001341") +AnnotationAssertion( "EHDAA:510") +AnnotationAssertion( "EMAPA:16197") +AnnotationAssertion( "VHOG:0000636") +AnnotationAssertion( "ZFA:0007068") +AnnotationAssertion(rdfs:label "epithelium of otic placode") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (yolk sac endoderm) AnnotationAssertion(Annotation( "UBERON:cjm") "The portion of the yolk sac that is derived from endoderm and lines the yolk sac.") @@ -50771,59 +59675,76 @@ SubClassOf( ) SubClassOf( ) -# Class: (mesentery of stomach) - -AnnotationAssertion(Annotation( "http://medical-dictionary.thefreedictionary.com/mesogastrium") "The portion of the primitive mesentery that encloses the stomach; from its dorsal sheet, the greater omentum develops, and from its ventral sheet, the lesser omentum.") -AnnotationAssertion( "EHDAA2:0001922") -AnnotationAssertion( "EHDAA:2999") -AnnotationAssertion( "EMAPA:17024") -AnnotationAssertion( "MA:0001617") -AnnotationAssertion( "SCTID:261623000") -AnnotationAssertion( "VHOG:0000358") -AnnotationAssertion(rdfs:label "mesentery of stomach") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (mesentery of heart) - -AnnotationAssertion(Annotation( "MA:th") "A mesentery that surrounds the heart.") -AnnotationAssertion( "EHDAA:432") -AnnotationAssertion( "EMAPA:16212") -AnnotationAssertion( "RETIRED_EHDAA2:0000739") -AnnotationAssertion( "VHOG:0000353") -AnnotationAssertion(rdfs:label "mesentery of heart") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (mesentery of oesophagus) - -AnnotationAssertion(Annotation( "OBOL:automatic") "A mesentery that is part of a esophagus [Automatically generated definition].") -AnnotationAssertion( "EHDAA2:0001288") -AnnotationAssertion( "EHDAA:2943") -AnnotationAssertion( "EMAPA:16836") -AnnotationAssertion( "MA:0001569") -AnnotationAssertion( "VHOG:0000415") -AnnotationAssertion(rdfs:label "mesentery of oesophagus") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) - -# Class: (mesentery of midgut) - -AnnotationAssertion(Annotation( "OBOL:automatic") "A mesentery that is part of a midgut [Automatically generated definition].") -AnnotationAssertion( "EHDAA2:0001202") -AnnotationAssertion( "EHDAA:3031") -AnnotationAssertion( "EMAPA:16721") -AnnotationAssertion( "EMAPA:17039") -AnnotationAssertion( "EMAPA:17197") -AnnotationAssertion( "VHOG:0000413") -AnnotationAssertion(rdfs:label "mesentery of midgut") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +# Class: (meninx of midbrain) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A meninx that is part of a midbrain [Automatically generated definition].") +AnnotationAssertion( "EHDAA2:0001174") +AnnotationAssertion( "EHDAA:3708") +AnnotationAssertion( "EMAPA:17791") +AnnotationAssertion( "MA:0001058") +AnnotationAssertion( "RETIRED_EHDAA2:0001109") +AnnotationAssertion( "VHOG:0000012") +AnnotationAssertion(rdfs:label "meninx of midbrain") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (meninx of telencephalon) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A meninx that is part of a telencephalon [Automatically generated definition].") +AnnotationAssertion( "EHDAA2:0001990") +AnnotationAssertion( "EHDAA:5476") +AnnotationAssertion( "EMAPA:17774") +AnnotationAssertion( "MA:0000979") +AnnotationAssertion( "VHOG:0000010") +AnnotationAssertion(rdfs:label "meninx of telencephalon") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (meninx of diencephalon) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A meninx that is part of a diencephalon [Automatically generated definition].") +AnnotationAssertion( "EHDAA2:0000399") +AnnotationAssertion( "EHDAA:5458") +AnnotationAssertion( "EMAPA:17764") +AnnotationAssertion( "MA:0000826") +AnnotationAssertion( "VHOG:0000009") +AnnotationAssertion(rdfs:label "meninx of diencephalon") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (meninx of hindbrain) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A meninx that is part of a hindbrain [Automatically generated definition].") +AnnotationAssertion( "EHDAA2:0000770") +AnnotationAssertion( "EHDAA:3688") +AnnotationAssertion( "EMAPA:17783") +AnnotationAssertion( "MA:0000987") +AnnotationAssertion( "VHOG:0000011") +AnnotationAssertion(rdfs:label "meninx of hindbrain") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (meninx of spinal cord) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A meninx that is part of a spinal cord [Automatically generated definition].") +AnnotationAssertion( "CALOHA:TS-2148") +AnnotationAssertion( "EHDAA2:0001895") +AnnotationAssertion( "EHDAA:2865") +AnnotationAssertion( "EMAPA:17804") +AnnotationAssertion( "MA:0001130") +AnnotationAssertion( "NCIT:C12350") +AnnotationAssertion( "SCTID:181097002") +AnnotationAssertion( "VHOG:0000443") +AnnotationAssertion(rdfs:label "meninx of spinal cord") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (gland of foregut) @@ -50850,6 +59771,18 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (gland of diencephalon) + +AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") "Any gland that is part of the diencephalon. Examples: pineal gland, neurohypophysis.") +AnnotationAssertion( "EHDAA2:0000395") +AnnotationAssertion( "EMAPA:16897") +AnnotationAssertion( "VHOG:0000653") +AnnotationAssertion(rdfs:label "gland of diencephalon") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (gland of integumental system) AnnotationAssertion(Annotation( "OBOL:automatic") "A gland that is part of a integumental system [Automatically generated definition].") @@ -50893,6 +59826,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (mesenchyme of ovary) AnnotationAssertion(Annotation( "OBOL:automatic") "Mesenchyme that is part of a developing ovary [Automatically generated definition].") +AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001362") AnnotationAssertion( "EHDAA:8128") AnnotationAssertion( "VHOG:0001441") @@ -50946,6 +59880,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (submucosa of anal canal) AnnotationAssertion(Annotation( "OBOL:automatic") "A submucosa that is part of an anal canal [Automatically generated definition].") +AnnotationAssertion( ) AnnotationAssertion( "EMAPA:27217") AnnotationAssertion( "EMAPA:27227") AnnotationAssertion( "EMAPA:27535") @@ -50972,6 +59907,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (submucosa of colon) AnnotationAssertion(Annotation( "OBOL:automatic") "A submucosa that is part of a colon [Automatically generated definition].") +AnnotationAssertion( ) AnnotationAssertion( "EMAPA:27379") AnnotationAssertion( "FMA:14985") AnnotationAssertion( "MA:0003200") @@ -50984,6 +59920,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (submucosa of duodenum) AnnotationAssertion(Annotation( "OBOL:automatic") "A submucosa that is part of a duodenum [Automatically generated definition].") +AnnotationAssertion( ) AnnotationAssertion( "EMAPA:27027") AnnotationAssertion( "EMAPA:27097") AnnotationAssertion( "EMAPA:27239") @@ -51008,6 +59945,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (serosa of colon) AnnotationAssertion(Annotation( "OBOL:automatic") "A serous membrane that is part of a colon [Automatically generated definition].") +AnnotationAssertion( ) AnnotationAssertion( "EMAPA:27387") AnnotationAssertion( "FMA:14990") AnnotationAssertion( "MA:0003199") @@ -51020,6 +59958,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (serosa of duodenum) AnnotationAssertion(Annotation( "OBOL:automatic") "A serous membrane that is part of a duodenum [Automatically generated definition].") +AnnotationAssertion( ) AnnotationAssertion( "EMAPA:27247") AnnotationAssertion( "FMA:14948") AnnotationAssertion( "MA:0003212") @@ -51056,6 +59995,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (mucosa of anal canal) AnnotationAssertion(Annotation( "OBOL:automatic") "A mucosa that is part of an anal canal [Automatically generated definition].") +AnnotationAssertion( ) AnnotationAssertion( "EMAPA:27531") AnnotationAssertion( "FMA:74654") AnnotationAssertion( "NCIT:C60784") @@ -51078,6 +60018,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (mucosa of rectum) AnnotationAssertion(Annotation( "OBOL:automatic") "A mucosa that is part of a rectum [Automatically generated definition].") +AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-2107") AnnotationAssertion( "EMAPA:27081") AnnotationAssertion( "FMA:15033") @@ -51155,6 +60096,24 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (epithelium of tongue) + +AnnotationAssertion(Annotation( "OBOL:automatic") "An epithelium that is part of a tongue [Automatically generated definition].") +AnnotationAssertion( "BTO:0000992") +AnnotationAssertion( "CALOHA:TS-1051") +AnnotationAssertion( "EHDAA2:0004598") +AnnotationAssertion( "EMAPA:17881") +AnnotationAssertion( "FMA:284658") +AnnotationAssertion( "MA:0001592") +AnnotationAssertion( "NCIT:C49300") +AnnotationAssertion(rdfs:comment "examples: tongue squamous epithelium, keratined, non-keratinized and parakeratinized epithelium, as well as gustatory epithelium. Note that not all these subtypes are named in individual anatomy ontologies.") +AnnotationAssertion(rdfs:label "epithelium of tongue") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (epithelium of right lung) AnnotationAssertion(Annotation( "OBOL:automatic") "An epithelium that is part of a right lung [Automatically generated definition].") @@ -51194,6 +60153,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (cardiac muscle of right atrium) AnnotationAssertion(Annotation( "OBOL:automatic") "A portion of cardiac muscle tissue that is part of a right atrium [Automatically generated definition].") +AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0004155") AnnotationAssertion( "EMAPA:17326") AnnotationAssertion( "FMA:7282") @@ -51242,6 +60202,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (cardiac muscle tissue of interventricular septum) AnnotationAssertion(Annotation( "OBOL:automatic") "A portion of cardiac muscle tissue that is part of an interventricular septum [Automatically generated definition].") +AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0004158") AnnotationAssertion( "EMAPA:17335") AnnotationAssertion( "FMA:84084") @@ -51275,6 +60236,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (smooth muscle of trachea) AnnotationAssertion(Annotation( "OBOL:automatic") "A portion of smooth muscle tissue that is part of a trachea [Automatically generated definition].") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0001391") AnnotationAssertion( "EMAPA:19192") AnnotationAssertion( "FMA:262010") @@ -51317,54 +60279,28 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (mesentery of urinary system) - -AnnotationAssertion(Annotation( "OBOL:automatic") "A mesentery that is part of a urinary system [Automatically generated definition].") -AnnotationAssertion( "EMAPA:17367") -AnnotationAssertion( "MA:0003233") -AnnotationAssertion(rdfs:label "mesentery of urinary system") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (mesentery of hindgut) - -AnnotationAssertion(Annotation( "OBOL:automatic") "A mesentery that is part of a hindgut [Automatically generated definition].") -AnnotationAssertion( "EMAPA:16718") -AnnotationAssertion(rdfs:label "mesentery of hindgut") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (mesentery of rectum) - -AnnotationAssertion(Annotation( "OBOL:automatic") "A mesentery that is part of a rectum [Automatically generated definition].") -AnnotationAssertion( "EMAPA:18664") -AnnotationAssertion(rdfs:label "mesentery of rectum") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) - -# Class: (mesentery of colon) - -AnnotationAssertion(Annotation( "OBOL:automatic") "A mesentery that is part of a colon [Automatically generated definition].") -AnnotationAssertion( "EMAPA:18942") -AnnotationAssertion( "FMA:14645") -AnnotationAssertion( "SCTID:245457004") -AnnotationAssertion(rdfs:label "mesentery of colon") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) - -# Class: (mesentery of duodenum) - -AnnotationAssertion(Annotation( "OBOL:automatic") "A mesentery that is part of a duodenum [Automatically generated definition].") -AnnotationAssertion( "EMAPA:19081") -AnnotationAssertion(rdfs:label "mesentery of duodenum") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) +# Class: (lobar bronchus of right lung) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A lobar bronchus that is part of a right lung [Automatically generated definition].") +AnnotationAssertion( "EMAPA:17664") +AnnotationAssertion( "MA:0003134") +AnnotationAssertion( "SCTID:245511004") +AnnotationAssertion(rdfs:label "lobar bronchus of right lung") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (lobar bronchus of left lung) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A lobar bronchus that is part of a left lung [Automatically generated definition].") +AnnotationAssertion( "EMAPA:17388") +AnnotationAssertion( "EMAPA:17656") +AnnotationAssertion( "MA:0003133") +AnnotationAssertion( "SCTID:245510003") +AnnotationAssertion(rdfs:label "lobar bronchus of left lung") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (cartilage of respiratory system) @@ -51387,6 +60323,15 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (gland of tongue) + +AnnotationAssertion(Annotation( "http://www.merriam-webster.com/medical/lingual%20gland") "Any of the mucous, serous, or mixed glands that empty their secretions onto the surface of the tongue.") +AnnotationAssertion( "EMAPA:25097") +AnnotationAssertion(rdfs:label "gland of tongue") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (pectoral appendage bud mesenchyme) AnnotationAssertion(Annotation( "OBOL:automatic") "Mesenchyme that is part of a pectoral appendage bud.") @@ -51401,6 +60346,16 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (mesenchyme of tongue) + +AnnotationAssertion(Annotation( "OBOL:automatic") "Mesenchyme that is part of a developing tongue [Automatically generated definition].") +AnnotationAssertion( "EHDAA2:0004614") +AnnotationAssertion( "EMAPA:17882") +AnnotationAssertion(rdfs:label "mesenchyme of tongue") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (dermis adipose tissue) AnnotationAssertion(Annotation( "OBOL:automatic") "An adipose tissue that is part of a dermis [Automatically generated definition].") @@ -51526,6 +60481,7 @@ SubClassOf( (artery of upper lip) AnnotationAssertion(Annotation( "Wikipedia:Superior_labial_artery") "The superior labial artery (superior labial branch of facial artery) is larger and more tortuous than the inferior labial artery. It follows a similar course along the edge of the upper lip, lying between the mucous membrane and the Orbicularis oris, and anastomoses with the artery of the opposite side. It supplies the upper lip, and gives off in its course two or three vessels which ascend to the nose; a septal branch ramifies on the nasal septum as far as the point of the nose, and an alar branch supplies the ala of the nose.") +AnnotationAssertion( ) AnnotationAssertion( "FMA:49570") AnnotationAssertion( "MA:0001917") AnnotationAssertion( "SCTID:145137009") @@ -51540,6 +60496,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (artery of lower lip) AnnotationAssertion(Annotation( "Wikipedia:Inferior_labial_artery") "The inferior labial artery (inferior labial branch of facial artery) arises near the angle of the mouth; it passes upward and forward beneath the Triangularis and, penetrating the Orbicularis oris, runs in a tortuous course along the edge of the lower lip between this muscle and the mucous membrane. It supplies the labial glands, the mucous membrane, and the muscles of the lower lip; and anastomoses with the artery of the opposite side, and with the mental branch of the inferior alveolar artery.") +AnnotationAssertion( ) AnnotationAssertion( "FMA:49567") AnnotationAssertion( "MA:0001916") AnnotationAssertion( "SCTID:145036002") @@ -51551,6 +60508,21 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (cerebellar artery) + +AnnotationAssertion(Annotation( "Wikipedia:Cerebellar_artery") "An artery that supplies blood to the cerebellum.") +AnnotationAssertion( "EHDAA2:0000228") +AnnotationAssertion( "EHDAA:5290") +AnnotationAssertion( "MA:0001933") +AnnotationAssertion( "NCIT:C52845") +AnnotationAssertion( "SCTID:278102002") +AnnotationAssertion( "Wikipedia:Cerebellar_artery") +AnnotationAssertion(rdfs:label "cerebellar artery") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (thoracic cavity artery) AnnotationAssertion(Annotation( "https://sourceforge.net/tracker/index.php?func=detail&aid=3317815&group_id=76834&atid=1205376") "An artery that is part of a thoracic cavity[cjm].") @@ -51561,6 +60533,18 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ) +# Class: (meningeal artery) + +AnnotationAssertion(Annotation( "Wikipedia:Meningeal_arteries") "One of the arteries supplying a meninix[Automatically generated definition].") +AnnotationAssertion( "GAID:499") +AnnotationAssertion( "MA:0002001") +AnnotationAssertion( "MESH:D008576") +AnnotationAssertion( "Wikipedia:Meningeal_arteries") +AnnotationAssertion(rdfs:label "meningeal artery") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (respiratory system venous blood vessel) AnnotationAssertion(Annotation( "OBOL:automatic") "A vein that is part of a respiratory system [Automatically generated definition].") @@ -51574,6 +60558,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (vein of upper lip) AnnotationAssertion(Annotation( "Wikipedia:Superior_labial_vein") "The inferior labial vein is the vein receiving blood from the upper lip.") +AnnotationAssertion( ) AnnotationAssertion( "FMA:52538") AnnotationAssertion( "MA:0002255") AnnotationAssertion( "SCTID:422755007") @@ -51586,6 +60571,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (vein of lower lip) AnnotationAssertion(Annotation( "Wikipedia:Inferior_labial_vein") "The inferior labial vein is the vein receiving blood from the lower lip.") +AnnotationAssertion( ) AnnotationAssertion( "FMA:52541") AnnotationAssertion( "MA:0002253") AnnotationAssertion( "SCTID:422955002") @@ -51929,6 +60915,176 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ) +# Class: (brain white matter) + +AnnotationAssertion(Annotation( "MP:0008026") "The regions of the brain that are largely or entirely composed of myelinated nerve cell axons and contain few or no neural cell bodies or dendrites.") +AnnotationAssertion( "EMAPA:35187") +AnnotationAssertion( "MA:0000820") +AnnotationAssertion( "NCIT:C49334") +AnnotationAssertion(rdfs:label "brain white matter") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (brain meninx) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A meninx that is part of a brain [Automatically generated definition].") +AnnotationAssertion( "CALOHA:TS-2147") +AnnotationAssertion( "EMAPA:32662") +AnnotationAssertion( "MA:0000813") +AnnotationAssertion( "SCTID:180949007") +AnnotationAssertion( "VHOG:0000013") +AnnotationAssertion(rdfs:label "brain meninx") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (forebrain meninges) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A meninx that is part of a forebrain [Automatically generated definition].") +AnnotationAssertion( "MA:0000883") +AnnotationAssertion(rdfs:label "forebrain meninges") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (brain pia mater) + +AnnotationAssertion(Annotation( "MP:0009026") "The fibrous membrane forming the innermost of the three coverings that surrounds the brain within the cranial cavity that is firmly attached to the glial capsule.") +AnnotationAssertion( "EMAPA:32667") +AnnotationAssertion( "MA:0000816") +AnnotationAssertion( "NCIT:C49335") +AnnotationAssertion( "VHOG:0000470") +AnnotationAssertion(rdfs:label "brain pia mater") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) + +# Class: (forebrain pia mater) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A pia mater that is part of a forebrain [Automatically generated definition].") +AnnotationAssertion( "MA:0000886") +AnnotationAssertion(rdfs:label "forebrain pia mater") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) + +# Class: (midbrain pia mater) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A pia mater that is part of a midbrain [Automatically generated definition].") +AnnotationAssertion( "EHDAA2:0001175") +AnnotationAssertion( "EMAPA:17794") +AnnotationAssertion( "MA:0001061") +AnnotationAssertion( "RETIRED_EHDAA2:0001110") +AnnotationAssertion( "VHOG:0000467") +AnnotationAssertion(rdfs:label "midbrain pia mater") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) + +# Class: (telencephalon pia mater) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A pia mater that is part of a telencephalon [Automatically generated definition].") +AnnotationAssertion( "EHDAA2:0001992") +AnnotationAssertion( "EMAPA:17777") +AnnotationAssertion( "MA:0000982") +AnnotationAssertion( "VHOG:0000476") +AnnotationAssertion(rdfs:label "telencephalon pia mater") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) + +# Class: (diencephalon pia mater) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A pia mater that is part of a diencephalon [Automatically generated definition].") +AnnotationAssertion( "EHDAA2:0000400") +AnnotationAssertion( "EMAPA:17767") +AnnotationAssertion( "MA:0000829") +AnnotationAssertion( "VHOG:0000475") +AnnotationAssertion(rdfs:label "diencephalon pia mater") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) + +# Class: (hindbrain pia mater) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A pia mater that is part of a hindbrain [Automatically generated definition].") +AnnotationAssertion( "EHDAA2:0000772") +AnnotationAssertion( "EMAPA:17786") +AnnotationAssertion( "MA:0000990") +AnnotationAssertion( "VHOG:0000466") +AnnotationAssertion(rdfs:label "hindbrain pia mater") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) + +# Class: (spinal cord pia mater) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A pia mater that is part of a spinal cord [Automatically generated definition].") +AnnotationAssertion( "EHDAA2:0001896") +AnnotationAssertion( "EMAPA:17807") +AnnotationAssertion( "MA:0001133") +AnnotationAssertion( "NCIT:C49800") +AnnotationAssertion( "VHOG:0000468") +AnnotationAssertion(rdfs:label "spinal cord pia mater") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) + +# Class: (forebrain arachnoid mater) + +AnnotationAssertion(Annotation( "OBOL:automatic") "An arachnoid mater that is part of a forebrain [Automatically generated definition].") +AnnotationAssertion( "MA:0000884") +AnnotationAssertion(rdfs:label "forebrain arachnoid mater") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) + +# Class: (midbrain arachnoid mater) + +AnnotationAssertion(Annotation( "OBOL:automatic") "An arachnoid mater that is part of a midbrain [Automatically generated definition].") +AnnotationAssertion( "EMAPA:17792") +AnnotationAssertion( "MA:0001059") +AnnotationAssertion( "VHOG:0000233") +AnnotationAssertion(rdfs:label "midbrain arachnoid mater") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) + +# Class: (diencephalon arachnoid mater) + +AnnotationAssertion(Annotation( "OBOL:automatic") "An arachnoid mater that is part of a diencephalon [Automatically generated definition].") +AnnotationAssertion( "EMAPA:17765") +AnnotationAssertion( "MA:0000827") +AnnotationAssertion( "VHOG:0000231") +AnnotationAssertion(rdfs:label "diencephalon arachnoid mater") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) + +# Class: (hindbrain arachnoid mater) + +AnnotationAssertion(Annotation( "OBOL:automatic") "An arachnoid mater that is part of a hindbrain [Automatically generated definition].") +AnnotationAssertion( "EMAPA:17784") +AnnotationAssertion( "MA:0000988") +AnnotationAssertion( "VHOG:0000236") +AnnotationAssertion(rdfs:label "hindbrain arachnoid mater") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) + +# Class: (spinal cord arachnoid mater) + +AnnotationAssertion(Annotation( "OBOL:automatic") "An arachnoid mater that is part of a spinal cord [Automatically generated definition].") +AnnotationAssertion( "EMAPA:17805") +AnnotationAssertion( "MA:0001131") +AnnotationAssertion( "VHOG:0000234") +AnnotationAssertion(rdfs:label "spinal cord arachnoid mater") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) + # Class: (head connective tissue) AnnotationAssertion(Annotation( "OBOL:automatic") "A portion of connective tissue that is part of a head [Automatically generated definition].") @@ -51971,6 +61127,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (trachea connective tissue) AnnotationAssertion(Annotation( "OBOL:automatic") "A portion of connective tissue that is part of a trachea.") +AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35876") AnnotationAssertion( "MA:0001853") AnnotationAssertion(rdfs:label "trachea connective tissue") @@ -51989,6 +61146,18 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (larynx connective tissue) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A portion of connective tissue that is part of a larynx [Automatically generated definition].") +AnnotationAssertion( "EMAPA:35471") +AnnotationAssertion( "MA:0001754") +AnnotationAssertion( "NCIT:C49245") +AnnotationAssertion(rdfs:label "larynx connective tissue") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (dermis connective tissue) AnnotationAssertion(Annotation( "OBOL:automatic") "A portion of connective tissue that is part of a dermis [Automatically generated definition].") @@ -52010,6 +61179,18 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (lobar bronchus connective tissue) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A portion of connective tissue that is part of a lobar bronchus [Automatically generated definition].") +AnnotationAssertion( ) +AnnotationAssertion( "MA:0001841") +AnnotationAssertion(rdfs:label "lobar bronchus connective tissue") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (bronchus connective tissue) AnnotationAssertion(Annotation( "OBOL:automatic") "A portion of connective tissue that is part of a bronchus [Automatically generated definition].") @@ -52064,6 +61245,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (trachea cartilage) AnnotationAssertion(Annotation( "J:97123") Annotation( "MGI:smb") Annotation( "MP:0003120") Annotation( "http://orcid.org/0000-0002-6601-2165") "The ring-shaped cartilaginous structures that support the trachea.") +AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18699") AnnotationAssertion( "EMAPA:35875") AnnotationAssertion( "FMA:7434") @@ -52161,6 +61343,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (trachea elastic tissue) AnnotationAssertion(Annotation( "OBOL:automatic") "An elastic tissue that is part of a trachea [Automatically generated definition].") +AnnotationAssertion( ) AnnotationAssertion( "MA:0001861") AnnotationAssertion(rdfs:label "trachea elastic tissue") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) @@ -52316,9 +61499,26 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (circle of Willis) + +AnnotationAssertion(Annotation( "Wikipedia:Circle_of_Willis") "A circle of arteries that supply blood to the brain. The Circle of Willis comprises the following arteries: Anterior cerebral artery (left and right); Anterior communicating artery; Internal carotid artery (left and right); Posterior cerebral artery (left and right); Posterior communicating artery (left and right).The basilar artery and middle cerebral arteries, supplying the brain, are also considered part of the circle.") +AnnotationAssertion( "EHDAA2:0000252") +AnnotationAssertion( "EHDAA:9758") +AnnotationAssertion( "FMA:50454") +AnnotationAssertion( "GAID:486") +AnnotationAssertion( "MESH:D002941") +AnnotationAssertion( "SCTID:362047009") +AnnotationAssertion( "Wikipedia:Circle_of_Willis") +AnnotationAssertion( "neuronames:1468") +AnnotationAssertion(rdfs:label "circle of Willis") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (brachiocephalic vein) AnnotationAssertion(Annotation( "Wikipedia:Brachiocephalic_vein") "The left and right brachiocephalic veins in the upper chest are formed by the union of each corresponding internal jugular vein and subclavian vein. This is at the level of the sternoclavicular joint. These great vessels merge to form the superior vena cava. The brachiocephalic veins are the major veins returning blood to the superior vena cava.") +AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000182") AnnotationAssertion( "EHDAA:9868") AnnotationAssertion( "FMA:4723") @@ -52336,6 +61536,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (splenic vein) AnnotationAssertion(Annotation( "ncithesaurus:Splenic_Vein") "A vein arising from the splenic trabecular vein in the hilum of the spleen that drains into the portal vein.") +AnnotationAssertion( ) AnnotationAssertion( "FMA:14331") AnnotationAssertion( "GAID:541") AnnotationAssertion( "MA:0002164") @@ -52370,6 +61571,7 @@ DisjointClasses( (splanchnic nerve) AnnotationAssertion(Annotation( "MP:0008318") "The major nerves supplying sympathetic innervation to the abdomen, including the greater, lesser, and lowest (or smallest) splanchnic nerves that are formed by preganglionic fibers from the spinal cord which pass through the paravertebral ganglia and then to the celiac ganglia and plexuses and the lumbar splanchnic nerves carry fibers which pass through the lumbar paravertebral ganglia to the mesenteric and hypogastric ganglia.") +AnnotationAssertion( ) AnnotationAssertion( "BAMS:spn") AnnotationAssertion( "FMA:5883") AnnotationAssertion( "GAID:800") @@ -52382,9 +61584,46 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (recurrent laryngeal nerve) + +AnnotationAssertion(Annotation( "Wikipedia:Recurrent_laryngeal_nerve") "A branch of the vagus nerve that supplies motor function and sensation to the larynx (voice box). It travels within the endoneurium. It is the nerve of the 6th Branchial Arch.") +AnnotationAssertion( ) +AnnotationAssertion( "AAO:0010754") +AnnotationAssertion( "FMA:6246") +AnnotationAssertion( "GAID:804") +AnnotationAssertion( "MESH:D012009") +AnnotationAssertion( "SCTID:24227007") +AnnotationAssertion( "VHOG:0001347") +AnnotationAssertion( "Wikipedia:Recurrent_laryngeal_nerve") +AnnotationAssertion(rdfs:label "recurrent laryngeal nerve") +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (lingual nerve) + +AnnotationAssertion(Annotation( "Wikipedia:Lingual_nerve") "The lingual nerve is a branch of the mandibular nerve (CN V3), itself a branch of the trigeminal nerve, which supplies sensory innervation to the tongue. It also carries fibers from the facial nerve, which return taste information from the anterior two thirds of the tongue.") +AnnotationAssertion( ) +AnnotationAssertion( "BAMS:5lg") +AnnotationAssertion( "EMAPA:19168") +AnnotationAssertion( "FMA:53218") +AnnotationAssertion( "GAID:835") +AnnotationAssertion( "MA:0001102") +AnnotationAssertion( "MESH:D008036") +AnnotationAssertion( "SCTID:280260006") +AnnotationAssertion( "Wikipedia:Lingual_nerve") +AnnotationAssertion(rdfs:label "lingual nerve") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (thoracic nerve) AnnotationAssertion(Annotation( "MESH:A08.800.800.720.800") "The twelve spinal nerves on each side of the thorax. They include eleven INTERCOSTAL NERVES and one subcostal nerve. Both sensory and motor, they supply the muscles and skin of the thoracic and abdominal walls.") +AnnotationAssertion( ) AnnotationAssertion( "FMA:5860") AnnotationAssertion( "GAID:857") AnnotationAssertion( "MESH:D013900") @@ -52601,6 +61840,33 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (telencephalon neural crest) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A neural crest that has_potential_to_developmentally_contribute_to a telencephalon.") +AnnotationAssertion( "EFO:0003574") +AnnotationAssertion( "RETIRED_EHDAA2:0001991") +AnnotationAssertion( "TAO:0000812") +AnnotationAssertion( "VHOG:0000799") +AnnotationAssertion( "ZFA:0000812") +AnnotationAssertion(rdfs:label "telencephalon neural crest") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (diencephalon neural crest) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A neural crest that has_potential_to_developmentally_contribute_to a diencephalon.") +AnnotationAssertion( "EFO:0003573") +AnnotationAssertion( "EHDAA2:0000603") +AnnotationAssertion( "EMAPA:16518") +AnnotationAssertion( "TAO:0000811") +AnnotationAssertion( "VHOG:0000798") +AnnotationAssertion( "ZFA:0000811") +AnnotationAssertion(rdfs:label "diencephalon neural crest") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (rhombencephalon neural crest) AnnotationAssertion(Annotation( "OBOL:automatic") "A neural crest that has_potential_to_developmentally_contribute_to a hindbrain.") @@ -52692,7 +61958,7 @@ AnnotationAssertion( "NCIT:C67387") AnnotationAssertion(rdfs:label "stroma") SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (liver primordium) @@ -52733,6 +61999,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (retinal neural layer) AnnotationAssertion(Annotation( "GO:0003407") "The part of the retina that contains neurons and photoreceptor cells[GO].") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0011095") AnnotationAssertion( "BTO:0000929") AnnotationAssertion( "CALOHA:TS-0685") @@ -52765,6 +62032,18 @@ AnnotationAssertion( "sinusoid") SubClassOf( ) +# Class: (choroid plexus epithelium) + +AnnotationAssertion(Annotation( "UBERON:cjm") Annotation( "Wikipedia:Choroid_plexus") "The epithelial component of the choroid plexus. Consists of cuboidal epithelial cells surrounding a core of capillaries and loose connective tissue.") +AnnotationAssertion( "EMAPA:36608") +AnnotationAssertion( "FMA:242811") +AnnotationAssertion( "MA:0000824") +AnnotationAssertion( "NCIT:C42079") +AnnotationAssertion(rdfs:label "choroid plexus epithelium") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (epithelial tube) AnnotationAssertion(Annotation( "GO:0060562") Annotation( "PMID:12526790") "Epithelial tubes transport gases, liquids and cells from one site to another and form the basic structure of many organs and tissues, with tube shape and organization varying from the single-celled excretory organ in Caenorhabditis elegans to the branching trees of the mammalian kidney and insect tracheal system.") @@ -52786,6 +62065,7 @@ SubClassOf( (venous blood vessel) AnnotationAssertion(Annotation( "http://www.thefreedictionary.com/venous+blood+vessel") "A blood vessel that carries blood from the capillaries toward the heart.") +AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35932") AnnotationAssertion( "FMA:86188") AnnotationAssertion( "MA:0000066") @@ -52897,6 +62177,18 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (diencephalic white matter) + +AnnotationAssertion(Annotation( "OBOL:automatic") "White matter that is part of a diencephalon [Automatically generated definition].") +AnnotationAssertion( "BIRNLEX:1678") +AnnotationAssertion( "FMA:83931") +AnnotationAssertion( "TAO:0000338") +AnnotationAssertion( "ZFA:0000338") +AnnotationAssertion(rdfs:label "diencephalic white matter") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (cartilage element of chondrocranium) AnnotationAssertion(Annotation( "https://orcid.org/0000-0002-6601-2165") "A cartilage element of chondrocranium. Example: neurocranial trabecula.") @@ -52938,9 +62230,20 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (brain ventricle/choroid plexus) + +AnnotationAssertion(Annotation( "MP:0002200") "The brain ventricles or their associated choroid plexuses.") +AnnotationAssertion(rdfs:label "brain ventricle/choroid plexus") +EquivalentClasses( ObjectUnionOf( )) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (anterior stroma of cornea) AnnotationAssertion(Annotation( "MP:0003093") "The anterior segment of the lamellated connective tissue layer of the cornea.") +AnnotationAssertion( ) AnnotationAssertion(rdfs:label "anterior stroma of cornea") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) @@ -52973,6 +62276,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (internal female genitalia) AnnotationAssertion(Annotation( "MP:0009209") "The internal feminine genital organs, including the ovaries, uterine tubes, uterus, uterine cervix, and vagina.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0003099") AnnotationAssertion( "FMA:45654") AnnotationAssertion( "SCTID:303518005") @@ -52982,6 +62286,20 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ) +# Class: (cerebellum fissure) + +AnnotationAssertion(Annotation( "MP:0009267") "One of a set of deep furrows which divide the lobules of the cerebellum. Examples: postcentral, primary and secondary furrows.") +AnnotationAssertion( "BAMS:CBf") +AnnotationAssertion( "DHBA:12828") +AnnotationAssertion( "FMA:321547") +AnnotationAssertion( "HBA:9406") +AnnotationAssertion( "SCTID:314163001") +AnnotationAssertion( "neuronames:1213") +AnnotationAssertion(rdfs:label "cerebellum fissure") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (embryonic-extraembryonic boundary) AnnotationAssertion(Annotation( "MP:0003890") "The connection between the embryo proper and extraembryonic tissues.") @@ -53022,9 +62340,68 @@ SubClassOf( ObjectSomeValuesFrom( SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) +# Class: (ganglionic eminence) + +AnnotationAssertion(Annotation( "MP:0004274") "The transient proliferative population of neurons that expands exponentially during late prenatal development; it is a continuous germinal zone distinct from the ventricular zone that surrounds the brain ventricles[MP].") +AnnotationAssertion( "DHBA:10549") +AnnotationAssertion( "EMAPA:32665") +AnnotationAssertion( "PBA:128012818") +AnnotationAssertion( "Wikipedia:Ganglionic_eminence") +AnnotationAssertion(rdfs:label "ganglionic eminence") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (medial ganglionic eminence) + +AnnotationAssertion(Annotation( "MP:0004276") "A distinct elevation of a transient proliferating cell mass of the fetal subventricular zone; this mass contributes most of its cells to the neocortex; however, hippocampal neurons, thalamus, septum and olfactory bulb neurons are also partly derived from the MGE.") +AnnotationAssertion( "DHBA:10550") +AnnotationAssertion( "PBA:128012834") +AnnotationAssertion(rdfs:label "medial ganglionic eminence") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (caudal ganglionic eminence) + +AnnotationAssertion(Annotation( "MP:0004278") "The caudally located, distinct elevation of a transient proliferating cell mass of the fetal subventricular zone, located adjacent to the lateral ventricle.") +AnnotationAssertion( "DHBA:10552") +AnnotationAssertion( "EFO:0001911") +AnnotationAssertion( "PBA:128012846") +AnnotationAssertion(rdfs:label "caudal ganglionic eminence") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (cortical subplate) + +AnnotationAssertion(Annotation( "MP:0008440") Annotation( "Wikipedia:Subplate") Annotation( "https://github.com/obophenotype/mouse-anatomy-ontology/issues/1") "The transient outer neural tube region that contains the first generated post-mitotic neurons that receive synaptic input from thalamic axons and in turn project axons to the developing cortical plate.") +AnnotationAssertion( "DHBA:10522") +AnnotationAssertion( "EMAPA:32703") +AnnotationAssertion( "PBA:294021932") +AnnotationAssertion( "Wikipedia:Subplate") +AnnotationAssertion( "https://upload.wikimedia.org/wikipedia/commons/thumb/a/ac/Corticogenesis_in_a_wild-type_mouse_with_captions_in_english_copy.png/360px-Corticogenesis_in_a_wild-type_mouse_with_captions_in_english_copy.png") +AnnotationAssertion( "neuronames:3233") +AnnotationAssertion(rdfs:label "cortical subplate") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (cortical intermediate zone) + +AnnotationAssertion(Annotation( "MP:0008457") "The region of the developing mammalian cortex that extends between the ventricular zone and the cortical plate (CP); normally, the IZ is a region of tangential migration of cells, and at midgestation, the lower part of the IZ develops into the subventricular zone.") +AnnotationAssertion( "EMAPA:17545") +AnnotationAssertion( "EMAPA:32712") +AnnotationAssertion(rdfs:label "cortical intermediate zone") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (biliary ductule) AnnotationAssertion(Annotation( "BTO:0002840") Annotation( "MP:0009494") "One of the fine terminal elements of the bile duct system, leaving the portal canal, and pursuing a course at the periphery of a lobule of the liver[BTO]. the excretory ducts of the liver that connect the interlobular ductules to the right or left hepatic duct[MP].") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0002840") AnnotationAssertion( "TAO:0005164") AnnotationAssertion( "ZFA:0005164") @@ -53125,6 +62502,26 @@ SubClassOf( ObjectSomeValuesFrom( SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (brain ventricle) + +AnnotationAssertion(Annotation( "https://github.com/obophenotype/uberon/issues/300") "One of the system of communicating cavities in the brain that are continuous with the central canal of the spinal cord, that like it are derived from the medullary canal of the embryo, that are lined with an epithelial ependyma, and that contain a serous fluid.") +AnnotationAssertion( ) +AnnotationAssertion( "BIRNLEX:1356") +AnnotationAssertion( "BTO:0001442") +AnnotationAssertion( "EFO:0001914") +AnnotationAssertion( "EMAPA:32674") +AnnotationAssertion( "FMA:78447") +AnnotationAssertion( "HBA:9418") +AnnotationAssertion( "MA:0000818") +AnnotationAssertion( "MESH:D002552") +AnnotationAssertion( "NCIT:C12356") +AnnotationAssertion( "SCTID:180929003") +AnnotationAssertion( "neuronames:2497") +AnnotationAssertion(rdfs:label "brain ventricle") +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (vena cava) AnnotationAssertion(Annotation( "Wikipedia:Venae_cavae") Annotation( "http://orcid.org/0000-0002-6601-2165") "Any of the veins that carries deoxygenated blood from a part of the body into the right atrium of the heart.") @@ -53158,12 +62555,15 @@ AnnotationAssertion( "midface") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (anatomical conduit) AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") "Any tube, opening or passage that connects two distinct anatomical spaces.") +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "AEO:0000080") AnnotationAssertion( "EHDAA2:0003080") AnnotationAssertion( "FMA:242873") @@ -53176,6 +62576,34 @@ SubClassOf( ObjectSomeValuesFrom( SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectExactCardinality(2 )) +# Class: (pharyngeal pouch) + +AnnotationAssertion(Annotation( "PMID:23020903") Annotation( "ZFA:0001106") Annotation( "http://orcid.org/0000-0002-6601-2165") "An internal pocketing of pharyngeal endoderm that contacts a region of ectoderm (a pharyngeal cleft) and interdigitates in the anterior and posterior directions with the pharyngeal arches.") +AnnotationAssertion( "AAO:0011113") +AnnotationAssertion( "EFO:0003627") +AnnotationAssertion( "EHDAA:1086") +AnnotationAssertion( "EHDAA:1669") +AnnotationAssertion( "EHDAA:579") +AnnotationAssertion( "EHDAA:617") +AnnotationAssertion( "EMAPA:32752") +AnnotationAssertion( "FMA:293063") +AnnotationAssertion( "NCIT:C34252") +AnnotationAssertion( "SCTID:34674002") +AnnotationAssertion( "TAO:0001106") +AnnotationAssertion( "VHOG:0001203") +AnnotationAssertion( "Wikipedia:Pharyngeal_pouch_(embryology)") +AnnotationAssertion( "XAO:0000282") +AnnotationAssertion( "ZFA:0001106") +AnnotationAssertion(rdfs:comment "The pouches are polarized structures. For example, whereas the rostral half of each pouch expresses Bmp-7, the caudal half expresses FGF-8 and the dorsal aspect of each pouch is marked via its expression of Pax-1. each pouch has an individual sense of identity. Shh expression is a prominent early feature of the caudal endoderm of the second arch, and individual pouches mark the anterior limits of expression of Hox genes within the pharyngeal endoderm; Hox-a2 has a rostral boundary at the second pouch, Hox-a3 at the third pouch and Hox-a4 at the most caudal pouch[PMID:16313389]") +AnnotationAssertion(rdfs:label "pharyngeal pouch") +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (vasculature of iris) AnnotationAssertion(Annotation( "OBOL:automatic") "A vasculature that is part of a iris [Automatically generated definition].") @@ -53291,6 +62719,22 @@ SubClassOf( ObjectSomeValuesFrom( SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (cerebellar layer) + +AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") Annotation( "ncithesaurus:Cortical_Cell_Layer_of_the_Cerebellum") "A cortical cell layer of the cerebellum. Examples: the granular (inner+outer) layer, molecular layer, Purkinje cell layer, and the ventricular layer of the embryo.") +AnnotationAssertion( "BIRNLEX:880") +AnnotationAssertion( "EMAPA:35212") +AnnotationAssertion( "FMA:83141") +AnnotationAssertion( "MA:0000201") +AnnotationAssertion( "NCIT:C49137") +AnnotationAssertion( "SCTID:360478008") +AnnotationAssertion(rdfs:label "cerebellar layer") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (salivatory nucleus) AnnotationAssertion(Annotation( "GO:0021751") "Missing definition for term UBERON:0004133. Please replace it using linked reference.") @@ -53371,7 +62815,7 @@ AnnotationAssertion(rdfs:label " SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (cardiac vein) @@ -53431,6 +62875,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (internal genitalia) AnnotationAssertion(Annotation( "GO:0035260") "The internal genitalia are the internal sex organs such as the uterine tube, the uterus and the vagina in female mammals, and the testis, seminal vesicle, ejaculatory duct and prostate in male mammals.") +AnnotationAssertion( ) AnnotationAssertion( "FMA:45652") AnnotationAssertion(rdfs:comment "TODO: make a subdivision of reproductive system. Relabel. See https://github.com/obophenotype/uberon/issues/547") AnnotationAssertion(rdfs:label "internal genitalia") @@ -53596,6 +63041,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (blood vessel smooth muscle) AnnotationAssertion(Annotation( "Wikipedia:Vascular_smooth_muscle") "Smooth muscle found within, and composing the majority of the wall of blood vessels.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0001431") AnnotationAssertion( "CALOHA:TS-1107") AnnotationAssertion( "EMAPA:35177") @@ -53646,6 +63092,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (bronchus smooth muscle) AnnotationAssertion(Annotation( "OBOL:automatic") "A portion of smooth muscle tissue that is part of a bronchus [Automatically generated definition].") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0004401") AnnotationAssertion( "EMAPA:35195") AnnotationAssertion( "MA:0001840") @@ -53727,6 +63174,29 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (lateral ventricle choroid plexus epithelium) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A choroid plexus epithelium that is part of a lateral ventricle [Automatically generated definition].") +AnnotationAssertion( "EHDAA2:0004450") +AnnotationAssertion( "FMA:242815") +AnnotationAssertion( "MA:0000962") +AnnotationAssertion( "NCIT:C49248") +AnnotationAssertion(rdfs:label "lateral ventricle choroid plexus epithelium") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (fourth ventricle choroid plexus epithelium) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A choroid plexus epithelium that is part of a fourth ventricle [Automatically generated definition].") +AnnotationAssertion( "FMA:242823") +AnnotationAssertion( "MA:0000984") +AnnotationAssertion( "NCIT:C49230") +AnnotationAssertion(rdfs:label "fourth ventricle choroid plexus epithelium") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (eye muscle) AnnotationAssertion(Annotation( "OBOL:automatic") "A muscle that is part of the eye region.") @@ -53743,6 +63213,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (skeleton) AnnotationAssertion(Annotation( "VSAO:0000026") "Anatomical cluster that consists of all the skeletal elements (eg., bone, cartilage, and teeth) of the body.") +AnnotationAssertion( ) AnnotationAssertion( "AEO:0000168") AnnotationAssertion( "EHDAA2:0001843") AnnotationAssertion( "EHDAA:5047") @@ -53804,6 +63275,23 @@ SubClassOf( ObjectSomeValuesFrom( SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (parasympathetic nerve) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A nerve that is part of a parasympathetic nervous system [Automatically generated definition].") +AnnotationAssertion( ) +AnnotationAssertion( "EHDAA2:0001401") +AnnotationAssertion( "EMAPA:17271") +AnnotationAssertion( "MA:0000224") +AnnotationAssertion( "SCTID:276146002") +AnnotationAssertion( "VHOG:0000641") +AnnotationAssertion(rdfs:label "parasympathetic nerve") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (respiratory system blood vessel smooth muscle) AnnotationAssertion(Annotation( "OBOL:automatic") "A blood vessel smooth muscle that is part of a respiratory system [Automatically generated definition].") @@ -53908,7 +63396,6 @@ AnnotationAssertion( "ZFA:0005004") AnnotationAssertion(rdfs:label "pharyngeal arch artery") SubClassOf( ) -SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -53994,6 +63481,28 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (cerebral artery) + +AnnotationAssertion(Annotation( "Wikipedia:Cerebral_artery") "One of three main pairs of arteries and their branches, which irrigate the cerebrum of the brain.") +AnnotationAssertion( "AAO:0010493") +AnnotationAssertion( "BTO:0005205") +AnnotationAssertion( "CALOHA:TS-0126") +AnnotationAssertion( "EHDAA2:0000233") +AnnotationAssertion( "EHDAA:5294") +AnnotationAssertion( "EMAPA:18613") +AnnotationAssertion( "GAID:484") +AnnotationAssertion( "MA:0002562") +AnnotationAssertion( "MESH:D002536") +AnnotationAssertion( "NCIT:C12691") +AnnotationAssertion( "SCTID:181308008") +AnnotationAssertion( "Wikipedia:Cerebral_artery") +AnnotationAssertion( "XAO:0000367") +AnnotationAssertion(rdfs:label "cerebral artery") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (trunk or cervical vertebra) AnnotationAssertion(Annotation( "UBERONREF:0000006") "A vertebra in the trunk or cervical region. Includes all cervical, thoracic and lumbar vertebrae, but excludes caudal vertebra.") @@ -54099,6 +63608,19 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (musculature of larynx) + +AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") "The collection of muscles that are part of the larynx.") +AnnotationAssertion( "FMA:264611") +AnnotationAssertion( "FMA:46616") +AnnotationAssertion( "MESH:D007821") +AnnotationAssertion( "Wikipedia:Muscles_of_larynx") +AnnotationAssertion(rdfs:label "musculature of larynx") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (musculature of trunk) AnnotationAssertion(Annotation( "OBOL:automatic") "Any collection of muscles that is part of a trunk [Automatically generated definition].") @@ -54160,6 +63682,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (smooth muscle tissue of bronchiole) AnnotationAssertion(Annotation( "OBOL:automatic") "A portion of smooth muscle tissue that is part of a bronchiole [Automatically generated definition].") +AnnotationAssertion( ) AnnotationAssertion( "FMA:261045") AnnotationAssertion(rdfs:label "smooth muscle tissue of bronchiole") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) @@ -54169,6 +63692,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (smooth muscle tissue of terminal bronchiole) AnnotationAssertion(Annotation( "OBOL:automatic") "A portion of smooth muscle tissue that is part of a terminal bronchiole [Automatically generated definition].") +AnnotationAssertion( ) AnnotationAssertion( "FMA:261051") AnnotationAssertion(rdfs:label "smooth muscle tissue of terminal bronchiole") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) @@ -54179,6 +63703,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (smooth muscle tissue of respiratory bronchiole) AnnotationAssertion(Annotation( "OBOL:automatic") "A portion of smooth muscle tissue that is part of a respiratory bronchiole [Automatically generated definition].") +AnnotationAssertion( ) AnnotationAssertion( "FMA:261055") AnnotationAssertion(rdfs:label "smooth muscle tissue of respiratory bronchiole") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) @@ -54236,6 +63761,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (cardiovascular system) AnnotationAssertion(Annotation( "BTO:0000088") "Anatomical system that has as its parts the heart and blood vessels.") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0011001") AnnotationAssertion( "BILA:0000016") AnnotationAssertion( "BTO:0000088") @@ -54268,6 +63794,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (blood vasculature) AnnotationAssertion(Annotation( "https://orcid.org/0000-0002-6601-2165") "A vascular network consisting of blood vessels.") +AnnotationAssertion( ) AnnotationAssertion( "TAO:0001079") AnnotationAssertion( "ZFA:0001079") AnnotationAssertion(rdfs:label "blood vasculature") @@ -54328,6 +63855,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (systemic artery) AnnotationAssertion(Annotation( "Wikipedia:Artery#Systemic_arteries") Annotation( "http://orcid.org/0000-0002-6601-2165") "An artery of the systemic circulation, which is the part of the cardiovascular system which carries oxygenated blood away from the heart, to the body, and returns deoxygenated blood back to the heart.") +AnnotationAssertion( ) AnnotationAssertion( "FMA:66464") AnnotationAssertion( "Wikipedia:Artery#Systemic_arteries") AnnotationAssertion(rdfs:label "systemic artery") @@ -54371,6 +63899,7 @@ SubClassOf( (blood vessel endothelium) AnnotationAssertion(Annotation( "https://orcid.org/0000-0002-6601-2165") "An endothelium that lines the blood vasculature. Other endothelia may line lymph vessels, the heart.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0000766") AnnotationAssertion( "CALOHA:TS-2155") AnnotationAssertion( "EMAPA:35176") @@ -54386,6 +63915,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (liver lobule) AnnotationAssertion(Annotation( "ISBN:0-683-40008-8") Annotation( "MP:0008987") "The polygonal structure of the liver that consists of hepatocytes radiating outward from a hepatic vein.") +AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35499") AnnotationAssertion( "FMA:14471") AnnotationAssertion( "MA:0002494") @@ -54399,6 +63929,16 @@ SubClassOf( ObjectSomeValuesFrom( SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (tongue keratinized epithelium) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A keratinized stratified squamous epithelium that is part of a tongue.") +AnnotationAssertion( "FMA:74865") +AnnotationAssertion( "MA:0002787") +AnnotationAssertion(rdfs:label "tongue keratinized epithelium") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) + # Class: (aorta wall) AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") "An anatomical wall that is part of an aorta, enclosing the luminal space.") @@ -54457,6 +63997,17 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (fourth ventricle aperture) + +AnnotationAssertion(Annotation( "https://orcid.org/0000-0002-6601-2165") "One of: the 4th ventricle median or lateral apertures.") +AnnotationAssertion( "FMA:242766") +AnnotationAssertion( "MA:0002945") +AnnotationAssertion(rdfs:label "fourth ventricle aperture") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (raphe nuclei) AnnotationAssertion(Annotation( "NLXANAT:20090205") Annotation( "https://sourceforge.net/tracker/?func=detail&aid=3248146&group_id=36855&atid=440764") "The raphe nuclei are thin plates of cells in and immediately adjacent to the sagittal plane.") @@ -54480,6 +64031,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (costo-cervical trunk) AnnotationAssertion(Annotation( "Wikipedia:Costocervical_trunk") "The costocervical trunk arises from the upper and back part of the subclavian artery, behind the scalenus anterior on the right side, and medial to that muscle on the left side. Passing backward, it splits into the deep cervical artery and the supreme intercostal artery (or the Highest intercostal artery), which descends behind the pleura in front of the necks of the first and second ribs, and anastomoses with the first aortic intercostal (3rd posterior intercostal artery). As it crosses the neck of the first rib it lies medial to the anterior division of the first thoracic nerve, and lateral to the first thoracic ganglion of the sympathetic trunk. In the first intercostal space, it gives off a branch which is distributed in a manner similar to the distribution of the aortic intercostals. The branch for the second intercostal space usually joins with one from the highest aortic intercostal artery. This branch is not constant, but is more commonly found on the right side; when absent, its place is supplied by an intercostal branch from the aorta. Each intercostal gives off a posterior branch which goes to the posterior vertebral muscles, and sends a small spinal branch through the corresponding intervertebral foramen to the medulla spinalis and its membranes. [WP,unvetted].") +AnnotationAssertion( ) AnnotationAssertion( "FMA:10636") AnnotationAssertion( "MA:0001939") AnnotationAssertion( "SCTID:244225009") @@ -54488,6 +64040,17 @@ AnnotationAssertion(rdfs:label " SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (external naris epithelium) + +AnnotationAssertion(Annotation( "OBOL:automatic") "An epithelium that is part of an external naris [Automatically generated definition].") +AnnotationAssertion( "EMAPA:18596") +AnnotationAssertion( "MA:0001321") +AnnotationAssertion(rdfs:label "external naris epithelium") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (arterial system smooth muscle) AnnotationAssertion(Annotation( "OBOL:automatic") "A portion of smooth muscle tissue that is part of an arterial system [Automatically generated definition].") @@ -54588,7 +64151,7 @@ SubClassOf( ObjectSomeValuesFrom( SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -54717,6 +64280,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (gland of anal canal) AnnotationAssertion(Annotation( "OBOL:automatic") Annotation( "Wikipedia:Anal_gland") "A gland that is part of an anal canal [Automatically generated definition].") +AnnotationAssertion( ) AnnotationAssertion( "EMAPA:27221") AnnotationAssertion( "EMAPA:27233") AnnotationAssertion( "EMAPA:27543") @@ -54744,7 +64308,7 @@ AnnotationAssertion( "cartilaginous neurocranium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (intramembranous bone tissue) @@ -54775,6 +64339,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (cranial bone) AnnotationAssertion(Annotation( "UBERON:automatic") "A bone that is part of a cranium.") +AnnotationAssertion( ) AnnotationAssertion( "SCTID:181792001") AnnotationAssertion(rdfs:label "cranial bone") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) @@ -54801,7 +64366,7 @@ AnnotationAssertion(rdfs:label " EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -54815,6 +64380,19 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (larynx submucosa) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A submucosa that is part of a larynx [Automatically generated definition].") +AnnotationAssertion( "EMAPA:35474") +AnnotationAssertion( "FMA:321584") +AnnotationAssertion( "MA:0002728") +AnnotationAssertion( "SCTID:361941005") +AnnotationAssertion(rdfs:label "larynx submucosa") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (respiratory system lamina propria) AnnotationAssertion(Annotation( "OBOL:automatic") "A lamina propria that is part of a respiratory system [Automatically generated definition].") @@ -54913,6 +64491,17 @@ SubClassOf( ObjectSomeValuesFrom( SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (larynx mucous gland) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A mucous gland that is part of a larynx [Automatically generated definition].") +AnnotationAssertion( "MA:0001767") +AnnotationAssertion(rdfs:label "larynx mucous gland") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (skin mucous gland) AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") "A mucous gland that is part of the skin.") @@ -55013,6 +64602,16 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (upper respiratory tract epithelium) + +AnnotationAssertion(Annotation( "OBOL:automatic") "An epithelium that is part of a upper respiratory tract [Automatically generated definition].") +AnnotationAssertion( "EMAPA:35894") +AnnotationAssertion( "MA:0001912") +AnnotationAssertion(rdfs:label "upper respiratory tract epithelium") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (lower respiratory tract epithelium) AnnotationAssertion(Annotation( "OBOL:automatic") "An epithelium that is part of a lower respiratory tract [Automatically generated definition].") @@ -55022,6 +64621,19 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (larynx epithelium) + +AnnotationAssertion(Annotation( "OBOL:automatic") "An epithelium that is part of a larynx [Automatically generated definition].") +AnnotationAssertion( "EHDAA2:0004065") +AnnotationAssertion( "EMAPA:35472") +AnnotationAssertion( "MA:0001765") +AnnotationAssertion( "NCIT:C49247") +AnnotationAssertion(rdfs:label "larynx epithelium") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (bile duct epithelium) AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") "Any epithelium that lines one of the bile ducts.") @@ -55128,6 +64740,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (respiratory system arterial endothelium) AnnotationAssertion(Annotation( "OBOL:automatic") "An endothelium of artery that is part of a respiratory system [Automatically generated definition].") +AnnotationAssertion( ) AnnotationAssertion( "MA:0001801") AnnotationAssertion(rdfs:label "respiratory system arterial endothelium") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) @@ -55138,6 +64751,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (respiratory system venous endothelium) AnnotationAssertion(Annotation( "OBOL:automatic") "An endothelium of vein that is part of a respiratory system [Automatically generated definition].") +AnnotationAssertion( ) AnnotationAssertion( "MA:0001811") AnnotationAssertion(rdfs:label "respiratory system venous endothelium") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) @@ -55178,15 +64792,6 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (gastrointestinal system mesentery) - -AnnotationAssertion(Annotation( "OBOL:automatic") "A mesentery that is part of a digestive system [Automatically generated definition].") -AnnotationAssertion( "MA:0001900") -AnnotationAssertion(rdfs:label "gastrointestinal system mesentery") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) - # Class: (skeletal muscle connective tissue) AnnotationAssertion(Annotation( "OBOL:automatic") "A connective tissue that surrounds a skeletal muscle tissue.") @@ -55232,6 +64837,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (vasculature of retina) AnnotationAssertion(Annotation( "OBOL:automatic") "A vasculature that is part of a retina [Automatically generated definition].") +AnnotationAssertion( ) AnnotationAssertion( "FMA:76552") AnnotationAssertion( "MESH:D012171") AnnotationAssertion(rdfs:label "vasculature of retina") @@ -55305,11 +64911,12 @@ AnnotationAssertion( "chordamesoderm") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (lung mesenchyme) AnnotationAssertion(Annotation( "GO:0060484") "The mass of tissue made up of mesenchymal cells in the lung.") +AnnotationAssertion( ) AnnotationAssertion( "EMAPA:32866") AnnotationAssertion(rdfs:label "lung mesenchyme") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) @@ -55318,6 +64925,25 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (lobar bronchus mesenchyme) + +AnnotationAssertion(Annotation( "GO:0060483") "The mass of tissue composed of mesenchymal cells in the lobar bronchus..") +AnnotationAssertion( ) +AnnotationAssertion( "EMAPA:32698") +AnnotationAssertion(rdfs:label "lobar bronchus mesenchyme") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (lobar bronchus vasculature) + +AnnotationAssertion(Annotation( "LG:0012616") "Vasculature that is composed of the tubule structures that carry blood or lymph in the lungs.") +AnnotationAssertion(rdfs:label "lobar bronchus vasculature") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (interalveolar septum) AnnotationAssertion(Annotation( "LG:0012625") Annotation( "Wikipedia:Alveolar_septum") "A the thin septum that separates adjacent pulmonary alveoli, containing connective tissue constituents of the respiratory tissue and the capillary network of the blood supply of the lung.") @@ -55359,9 +64985,19 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (right lung lobar bronchus mesenchyme) + +AnnotationAssertion(Annotation( "LG:0012681") "The right lung lobar bronchus mesenchyme is a type of tissue made up of loosely-packed mesenchymal cells in the right lung lobar bronchus.") +AnnotationAssertion( "EMAPA:17665") +AnnotationAssertion(rdfs:label "right lung lobar bronchus mesenchyme") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) + # Class: (neuron projection bundle connecting eye with brain) AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") "A neuron projection bundle that connects the retina or its analog in the eye with the brain. This includes the vertebrate optic nerve (not truly a nerve) as well as analogous structures such as the Bolwig nerve in Drosophila.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0000966") AnnotationAssertion( "EV:0100351") AnnotationAssertion( "TADS:0000232") @@ -55451,6 +65087,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (hepatopancreatic ampulla) AnnotationAssertion(Annotation( "Wikipedia:Ampulla_of_Vater") "A dilation of the duodenal papilla that is the opening of the juncture of the common bile duct and the main pancreatic duct.") +AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-2348") AnnotationAssertion( "FMA:15076") AnnotationAssertion( "GAID:283") @@ -55482,6 +65119,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (sphincter of hepatopancreatic ampulla) AnnotationAssertion(Annotation( "Wikipedia:Sphincter_of_ampulla") "Muscular valve that controls the flow of digestive juices (bile and pancreatic juice) through the ampulla of Vater into the second part of the duodenum. Relaxed by the hormone Cholecystokinin (CCK) via vasoactive intestinal polypeptide (VIP).[WP].") +AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18663") AnnotationAssertion( "FMA:15077") AnnotationAssertion( "GAID:285") @@ -55508,6 +65146,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (subdivision of digestive tract) AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") "A proximal-distal subdivision of the digestive tract.") +AnnotationAssertion( ) AnnotationAssertion( "FMA:71131") AnnotationAssertion(rdfs:label "subdivision of digestive tract") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) @@ -55522,7 +65161,7 @@ AnnotationAssertion( "organ component layer") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (submucosa of pharynx) @@ -55628,6 +65267,24 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (submucosa of lobar bronchus) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A submucosa that is part of a lobar bronchus [Automatically generated definition].") +AnnotationAssertion( "FMA:62669") +AnnotationAssertion(rdfs:label "submucosa of lobar bronchus") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (submucosa of segmental bronchus) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A submucosa that is part of a segmental bronchus [Automatically generated definition].") +AnnotationAssertion( "FMA:62670") +AnnotationAssertion(rdfs:label "submucosa of segmental bronchus") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (submucosa of bronchiole) AnnotationAssertion(Annotation( "OBOL:automatic") "A submucosa that is part of a bronchiole [Automatically generated definition].") @@ -55650,6 +65307,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (mucosa of sigmoid colon) AnnotationAssertion(Annotation( "OBOL:automatic") "A mucosa that is part of a sigmoid colon [Automatically generated definition].") +AnnotationAssertion( ) AnnotationAssertion( "FMA:15026") AnnotationAssertion(rdfs:label "mucosa of sigmoid colon") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) @@ -55733,6 +65391,17 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (mucosa of tongue) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A mucosa that is part of a tongue [Automatically generated definition].") +AnnotationAssertion( "EFO:0002553") +AnnotationAssertion( "FMA:54807") +AnnotationAssertion( "SCTID:362092002") +AnnotationAssertion(rdfs:label "mucosa of tongue") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (mucosa of upper lip) AnnotationAssertion(Annotation( "OBOL:automatic") "A mucosa that is part of a upper lip [Automatically generated definition].") @@ -55766,6 +65435,24 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (mucosa of lobar bronchus) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A mucosa that is part of a lobar bronchus [Automatically generated definition].") +AnnotationAssertion( "FMA:62668") +AnnotationAssertion(rdfs:label "mucosa of lobar bronchus") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (mucosa of segmental bronchus) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A mucosa that is part of a segmental bronchus [Automatically generated definition].") +AnnotationAssertion( "FMA:62666") +AnnotationAssertion(rdfs:label "mucosa of segmental bronchus") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (mucosa of bronchiole) AnnotationAssertion(Annotation( "OBOL:automatic") "A mucosa that is part of a bronchiole [Automatically generated definition].") @@ -55798,6 +65485,8 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (external female genitalia) AnnotationAssertion(Annotation( "OBOL:automatic") "An external genitalia that is part of a female reproductive system [Automatically generated definition].") +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "BTO:0003100") AnnotationAssertion( "EMAPA:30984") AnnotationAssertion( "FMA:45649") @@ -55888,6 +65577,21 @@ AnnotationAssertion(rdfs:label " SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (forebrain-midbrain boundary) + +AnnotationAssertion(Annotation( "OBOL:automatic") "An anatomical boundary that adjacent_to a forebrain and adjacent_to a midbrain.") +AnnotationAssertion( "EMAPA:36449") +AnnotationAssertion( "TAO:0001367") +AnnotationAssertion( "ZFA:0001367") +AnnotationAssertion(rdfs:label "forebrain-midbrain boundary") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (hindbrain-spinal cord boundary) AnnotationAssertion(Annotation( "OBOL:automatic") "An anatomical boundary that adjacent_to a hindbrain and adjacent_to a spinal cord.") @@ -55926,7 +65630,7 @@ AnnotationAssertion( "muscle structure") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (right horn of sinus venosus) @@ -55982,6 +65686,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (interstitial tissue) AnnotationAssertion(Annotation( "http://medical-dictionary.thefreedictionary.com/tissue") "Connective tissue between the cellular elements of a structure.") +AnnotationAssertion( ) AnnotationAssertion( "FMA:86301") AnnotationAssertion( "SCTID:85293002") AnnotationAssertion(rdfs:label "interstitial tissue") @@ -56074,6 +65779,7 @@ SubClassOf( (trachea gland) AnnotationAssertion(Annotation( "ISBN:1451113412") Annotation( "MGI:Anna") Annotation( "PMID:15973734") Annotation( "http://medical-dictionary.thefreedictionary.com/tracheal+glands") Annotation( "https://github.com/obophenotype/uberon/issues/1197") "A tubuloacinar seromucous gland that is located principally in the submucosa of the trachea. Excretory ducts from this gland pass through the lamina propria to the tracheal lumen.") +AnnotationAssertion( ) AnnotationAssertion( "EMAPA:36574") AnnotationAssertion( "FMA:7473") AnnotationAssertion( "MA:0002937") @@ -56083,6 +65789,60 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (larynx submucosa gland) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A gland that is part of a larynx submucosa [Automatically generated definition].") +AnnotationAssertion( "EMAPA:35475") +AnnotationAssertion( "MA:0002729") +AnnotationAssertion(rdfs:label "larynx submucosa gland") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (choroid plexus stroma) + +AnnotationAssertion(Annotation( "PMCID:PMC3496674") "Stromal matrix surrounding blood vessels within the choroid plexus.") +AnnotationAssertion( "EMAPA:36609") +AnnotationAssertion( "MA:0000825") +AnnotationAssertion(rdfs:label "choroid plexus stroma") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (midbrain subarachnoid space) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A subarachnoid space that is part of a midbrain [Automatically generated definition].") +AnnotationAssertion( "EMAPA:19055") +AnnotationAssertion( "VHOG:0001304") +AnnotationAssertion(rdfs:label "midbrain subarachnoid space") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (diencephalon subarachnoid space) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A subarachnoid space that is part of a diencephalon [Automatically generated definition].") +AnnotationAssertion( "EMAPA:19053") +AnnotationAssertion( "VHOG:0001302") +AnnotationAssertion(rdfs:label "diencephalon subarachnoid space") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (hindbrain subarachnoid space) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A subarachnoid space that is part of a hindbrain [Automatically generated definition].") +AnnotationAssertion( "EMAPA:18211") +AnnotationAssertion( "VHOG:0001303") +AnnotationAssertion(rdfs:label "hindbrain subarachnoid space") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (liver right lobe parenchyma) AnnotationAssertion(Annotation( "OBOL:automatic") "A parenchyma that is part of a right lobe of liver [Automatically generated definition].") @@ -56220,6 +65980,79 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (ventricular system of central nervous system) + +AnnotationAssertion(Annotation( "Wikipedia:Ventricular_system") "A set of structures containing cerebrospinal fluid in the brain. It is continuous with the central canal of the spinal cord[WP].") +AnnotationAssertion( "EFO:0003650") +AnnotationAssertion( "EHDAA2:0004362") +AnnotationAssertion( "EV:0100306") +AnnotationAssertion( "FMA:242675") +AnnotationAssertion( "MBA:73") +AnnotationAssertion( "TAO:0001261") +AnnotationAssertion( "Wikipedia:Ventricular_system") +AnnotationAssertion( "ZFA:0001261") +AnnotationAssertion( "neuronames:2497") +AnnotationAssertion(rdfs:label "ventricular system of central nervous system") +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (ventricular system of brain) + +AnnotationAssertion( "CALOHA:TS-1295") +AnnotationAssertion( "FMA:242787") +AnnotationAssertion( "VHOG:0000005") +AnnotationAssertion(rdfs:label "ventricular system of brain") +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (tela choroidea) + +AnnotationAssertion(Annotation( "ISBN:0471888893") Annotation( "Wikipedia:Tela_chorioidea") Annotation( "http://isc.temple.edu/neuroanatomy/lab/embryo_new/choroid/") "A structure found in the walls of the ventricles of the brain, consisting of part of the meninges (pia mater in mammals) plus ependyma[cjm].") +AnnotationAssertion( "FMA:242849") +AnnotationAssertion( "TAO:0000447") +AnnotationAssertion( "Wikipedia:Tela_chorioidea") +AnnotationAssertion( "ZFA:0000447") +AnnotationAssertion( "neuronames:1378") +AnnotationAssertion(rdfs:label "tela choroidea") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (tela choroidea of fourth ventricle) + +AnnotationAssertion(Annotation( "Wikipedia:Tela_chorioidea_of_fourth_ventricle") Annotation( "ZFIN:curator") "Tela chorioidea that lines the fourth ventricle[ZFA]. The tela chorioidea of the fourth ventricle is the name applied to the triangular fold of pia mater which is carried upward between the cerebellum and the medulla oblongata. It consists of two layers, which are continuous with each other in front, and are more or less adherent throughout: The posterior layer covers the antero-inferior surface of the cerebellum. The anterior layer is applied to the structures which form the lower part of the roof of the ventricle, and is continuous inferiorly with the pia mater on the inferior peduncles and closed part of the medulla[WP].") +AnnotationAssertion( "BAMS:tc4v") +AnnotationAssertion( "FMA:78493") +AnnotationAssertion( "SCTID:362321009") +AnnotationAssertion( "TAO:0005158") +AnnotationAssertion( "Wikipedia:Tela_chorioidea_of_fourth_ventricle") +AnnotationAssertion( "ZFA:0005158") +AnnotationAssertion( "neuronames:639") +AnnotationAssertion(rdfs:label "tela choroidea of fourth ventricle") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (tela choroidea of telencephalic ventricle) + +AnnotationAssertion(Annotation( "ZFIN:curator") "Tela chorioidea that lines the telencephalic ventricle.") +AnnotationAssertion( "BAMS:tclv") +AnnotationAssertion( "FMA:83712") +AnnotationAssertion( "SCTID:362319004") +AnnotationAssertion( "TAO:0005160") +AnnotationAssertion( "ZFA:0005160") +AnnotationAssertion( "neuronames:219") +AnnotationAssertion(rdfs:label "tela choroidea of telencephalic ventricle") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (myelencephalon) AnnotationAssertion(Annotation( "BTO:0000758") Annotation( "Wikipedia:Myelencephalon") "The posterior part of the developing vertebrate hindbrain or the corresponding part of the adult brain composed of the medulla oblongata and a portion of the fourth ventricle; as well as the glossopharyngeal nerve (CN IX), vagus nerve (CN X), accessory nerve (CN XI), hypoglossal nerve (CN XII), and a portion of the vestibulocochlear nerve (CN VIII).[BTO,WP].") @@ -56320,6 +66153,66 @@ AnnotationAssertion( "outflow tract pulmonary component") SubClassOf( ) +# Class: (cortical plate) + +AnnotationAssertion(Annotation( "MP:0008439") Annotation( "http://www.ncbi.nlm.nih.gov/books/NBK10047") "The outer neural tube region in which post-mitotic neuroblasts migrate along radial glia to form the adult cortical layers[MP].") +AnnotationAssertion( "BAMS:CTXpl") +AnnotationAssertion( "DHBA:10515") +AnnotationAssertion( "EMAPA:32711") +AnnotationAssertion( "MBA:695") +AnnotationAssertion( "PBA:294021914") +AnnotationAssertion( "neuronames:2702") +AnnotationAssertion(rdfs:label "cortical plate") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (ventricle of nervous system) + +AnnotationAssertion(Annotation( "https://github.com/obophenotype/uberon/issues/300") "A layer in the central nervous system that lines system of communicating cavities in the brain and spinal cord.") +AnnotationAssertion( "EMAPA:35209") +AnnotationAssertion( "FMA:242770") +AnnotationAssertion(rdfs:label "ventricle of nervous system") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (vagus X ganglion) + +AnnotationAssertion(Annotation( "ISBN:0-683-40008-8") Annotation( "MP:0001100") "The group of sensory neuron cell bodies associated with the vagus nerve.") +AnnotationAssertion( ) +AnnotationAssertion( "EMAPA:16798") +AnnotationAssertion( "FMA:53472") +AnnotationAssertion( "MA:0001081") +AnnotationAssertion( "SCTID:244452001") +AnnotationAssertion( "TAO:0007067") +AnnotationAssertion( "VHOG:0000684") +AnnotationAssertion( "Wikipedia:Vagus_ganglion") +AnnotationAssertion( "ZFA:0007067") +AnnotationAssertion(rdfs:label "vagus X ganglion") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (nasal cavity epithelium) + +AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") "An epithelium that lines the nasal cavity.") +AnnotationAssertion( "CALOHA:TS-0656") +AnnotationAssertion( "EHDAA2:0001227") +AnnotationAssertion( "EHDAA:6803") +AnnotationAssertion( "EMAPA:17605") +AnnotationAssertion( "FMA:63140") +AnnotationAssertion( "MA:0001324") +AnnotationAssertion( "NCIT:C49261") +AnnotationAssertion( "VHOG:0000501") +AnnotationAssertion(rdfs:label "nasal cavity epithelium") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (photoreceptor array) AnnotationAssertion(Annotation( "https://orcid.org/0000-0002-6601-2165") "An array of photoreceptors and any supporting cells found in an eye.") @@ -56338,6 +66231,102 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (cortical layer I) + +AnnotationAssertion(Annotation( "NLXANAT:090807") "The most superficial layer of the neocortex characterized by a paucity of cell bodies.") +AnnotationAssertion( "ABA:CTX1") +AnnotationAssertion( "BTO:0004906") +AnnotationAssertion( "EMAPA:35255") +AnnotationAssertion( "FMA:83900") +AnnotationAssertion( "MA:0000897") +AnnotationAssertion( "NCIT:C33137") +AnnotationAssertion( "NLXANAT:090807") +AnnotationAssertion( "PBA:294021786") +AnnotationAssertion( "neuronames:2444") +AnnotationAssertion(rdfs:label "cortical layer I") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (cortical layer II) + +AnnotationAssertion(Annotation( "NLXANAT:090808") "Layer of neocortex lying just deep to molecular layer characterized by numerous small cell bodies.") +AnnotationAssertion( "ABA:CTX2") +AnnotationAssertion( "EMAPA:35256") +AnnotationAssertion( "FMA:77804") +AnnotationAssertion( "MA:0000898") +AnnotationAssertion( "NCIT:C32557") +AnnotationAssertion( "NLXANAT:090808") +AnnotationAssertion( "PBA:294021800") +AnnotationAssertion( "neuronames:2446") +AnnotationAssertion(rdfs:label "cortical layer II") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (cortical layer III) + +AnnotationAssertion(Annotation( "NLXANAT:090809") "Layer of neocortex lying deep to the external granule cell layer defined cytoarchitecturally by numerous small pyramidal neurons.") +AnnotationAssertion( "ABA:CTX3") +AnnotationAssertion( "EMAPA:35257") +AnnotationAssertion( "FMA:77810") +AnnotationAssertion( "MA:0000899") +AnnotationAssertion( "NCIT:C32571") +AnnotationAssertion( "NLXANAT:090809") +AnnotationAssertion( "PBA:294021824") +AnnotationAssertion( "neuronames:2448") +AnnotationAssertion(rdfs:label "cortical layer III") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (cortical layer IV) + +AnnotationAssertion(Annotation( "NLXANAT:090810") "Layer of neocortex lying deep to the external pyramidal cell layer defined cytoarchitecturally by the presence of numerous small cells.") +AnnotationAssertion( "ABA:CTX4") +AnnotationAssertion( "EMAPA:35258") +AnnotationAssertion( "FMA:77811") +AnnotationAssertion( "MA:0000900") +AnnotationAssertion( "NCIT:C32844") +AnnotationAssertion( "NLXANAT:090810") +AnnotationAssertion( "PBA:294021852") +AnnotationAssertion( "neuronames:2449") +AnnotationAssertion(rdfs:label "cortical layer IV") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (cortical layer V) + +AnnotationAssertion(Annotation( "NLXANAT:090811") "Layer of neocortex lying deep to the internal granule cell layer (layer 4) defined cytoarchitecturally by the predominance of large pyramidal cell bodies.") +AnnotationAssertion( "ABA:CTX5") +AnnotationAssertion( "EMAPA:35259") +AnnotationAssertion( "FMA:77812") +AnnotationAssertion( "MA:0000901") +AnnotationAssertion( "NCIT:C32653") +AnnotationAssertion( "NLXANAT:090811") +AnnotationAssertion( "PBA:294021878") +AnnotationAssertion( "neuronames:2450") +AnnotationAssertion(rdfs:label "cortical layer V") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (cortical layer VI) + +AnnotationAssertion(Annotation( "NLXANAT:090812") "Innermost layer of neocortex lying deep to the internal pyramidal cell layer defined cytoarchitecturally by cells of varying size.") +AnnotationAssertion( "ABA:CTX6") +AnnotationAssertion( "EMAPA:35260") +AnnotationAssertion( "FMA:77805") +AnnotationAssertion( "MA:0000902") +AnnotationAssertion( "NLXANAT:090812") +AnnotationAssertion( "PBA:294021896") +AnnotationAssertion( "neuronames:2451") +AnnotationAssertion(rdfs:label "cortical layer VI") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (carotid artery segment) AnnotationAssertion(Annotation( "Wikipedia:Carotid_artery") Annotation( "https://sourceforge.net/tracker/?func=detail&aid=3486870&group_id=76834&atid=994764") "One of: the common carotid artery, or its branches, the external and internal carotid arteries.") @@ -56364,6 +66353,22 @@ AnnotationAssertion( "carotid artery segment") SubClassOf( ) +# Class: (brain arachnoid mater) + +AnnotationAssertion(Annotation( "OBOL:automatic") "An arachnoid mater that surrounds a brain.") +AnnotationAssertion( "EMAPA:32661") +AnnotationAssertion( "FMA:83981") +AnnotationAssertion( "MA:0000814") +AnnotationAssertion( "NCIT:C49331") +AnnotationAssertion( "UMLS:C1707346") +AnnotationAssertion( "VHOG:0000230") +AnnotationAssertion(rdfs:label "brain arachnoid mater") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (female reproductive gland) AnnotationAssertion(Annotation( "OBOL:automatic") "A sex gland that is part of a female reproductive system.") @@ -56374,6 +66379,28 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (telencephalon arachnoid mater) + +AnnotationAssertion(Annotation( "OBOL:automatic") "An arachnoid mater that is part of a telencephalon.") +AnnotationAssertion( "EMAPA:17775") +AnnotationAssertion( "MA:0000980") +AnnotationAssertion(rdfs:label "telencephalon arachnoid mater") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) + +# Class: (cerebral hemisphere gray matter) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A gray matter that is part of a cerebral hemisphere.") +AnnotationAssertion( "BTO:0000823") +AnnotationAssertion( "CALOHA:TS-2361") +AnnotationAssertion( "FMA:61821") +AnnotationAssertion( "MA:0000944") +AnnotationAssertion(rdfs:label "cerebral hemisphere gray matter") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (alimentary part of gastrointestinal system) AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") "The part of the digestive system that excludes the hepatobiliary system.") @@ -56429,6 +66456,9 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (developing anatomical structure) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "AEO:0000125") AnnotationAssertion( "CALOHA:TS-2122") AnnotationAssertion( "EHDAA2:0003125") @@ -56517,11 +66547,12 @@ AnnotationAssertion( "cervical region") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (common hepatic artery) AnnotationAssertion(Annotation( "Wikipedia:Common_hepatic_artery") "In anatomy, the common hepatic artery is a short blood vessel that supplies oxygenated blood to the liver, pylorus (a part of the stomach), duodenum (a part of the small intestine) and pancreas. It arises from the celiac artery and has the following branches:.") +AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0000308") AnnotationAssertion( "EHDAA:8570") AnnotationAssertion( "FMA:14771") @@ -56551,6 +66582,26 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (jugular foramen) + +AnnotationAssertion(Annotation( "Wikipedia:Jugular_foramen") "The jugular foramen is a large aperture in the base of the skull. It is located behind the carotid canal and is formed in front by the petrous portion of the temporal, and behind by the occipital; it is generally larger on the right than on the left side.") +AnnotationAssertion( "AAO:0000249") +AnnotationAssertion( "EHDAA2:0000893") +AnnotationAssertion( "EHDAA:10631") +AnnotationAssertion( "EMAPA:18713") +AnnotationAssertion( "FMA:56432") +AnnotationAssertion( "NCIT:C12496") +AnnotationAssertion( "SCTID:361735006") +AnnotationAssertion( "VHOG:0001113") +AnnotationAssertion( "Wikipedia:Jugular_foramen") +AnnotationAssertion(rdfs:label "jugular foramen") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (left vitelline vein) AnnotationAssertion(Annotation( "OBOL:automatic") "A vitelline vein that is in the left side of a multicellular organism.") @@ -56608,6 +66659,16 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (glossopharyngeal neural crest) + +AnnotationAssertion(Annotation( "ZFA:0007066") "Cranial neural crest which gives rise to the glossopharyngeal ganglion.") +AnnotationAssertion( "EHDAA2:0000714") +AnnotationAssertion( "EHDAA:660") +AnnotationAssertion( "TAO:0007066") +AnnotationAssertion( "ZFA:0007066") +AnnotationAssertion(rdfs:label "glossopharyngeal neural crest") +SubClassOf( ) + # Class: (neural tube lateral wall) AnnotationAssertion(Annotation( "ZFA:0001435") "Portion of tissue on the side of the lumen of the neural tube.") @@ -56655,6 +66716,21 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (rhombomere 1) + +AnnotationAssertion(Annotation( "ZFA:0001031") "Hindbrain segment or neuromere 1.") +AnnotationAssertion( "DHBA:12667") +AnnotationAssertion( "DMBA:16915") +AnnotationAssertion( "EFO:0003608") +AnnotationAssertion( "EHDAA2:0001637") +AnnotationAssertion( "EMAPA:16290") +AnnotationAssertion( "FMA:295790") +AnnotationAssertion( "TAO:0001031") +AnnotationAssertion( "ZFA:0001031") +AnnotationAssertion(rdfs:label "rhombomere 1") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (rhombomere lateral wall) AnnotationAssertion(Annotation( "OBOL:automatic") "A neural tube lateral wall that is part of a rhombomere.") @@ -56696,6 +66772,33 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (facio-acoustic neural crest) + +AnnotationAssertion(Annotation( "ZFA:0000762") "Cranial neural crest that gives rise to the facio-acoustic ganglion.") +AnnotationAssertion( "EHDAA2:0000492") +AnnotationAssertion( "EHDAA:658") +AnnotationAssertion( "EMAPA:16312") +AnnotationAssertion( "TAO:0000762") +AnnotationAssertion( "VHOG:0000268") +AnnotationAssertion( "ZFA:0000762") +AnnotationAssertion(rdfs:label "facio-acoustic neural crest") +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (rhombomere 1 lateral wall) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A rhombomere lateral wall that is part of a rhombomere 1.") +AnnotationAssertion( "EHDAA2:0001641") +AnnotationAssertion( "EMAPA:16482") +AnnotationAssertion( "TAO:0000781") +AnnotationAssertion( "ZFA:0000781") +AnnotationAssertion(rdfs:label "rhombomere 1 lateral wall") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (head somite) AnnotationAssertion(Annotation( "PMID:11830559") "Somite located in the head region, caudal to the otic vesicle.") @@ -56735,21 +66838,6 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (dorsal mesogastrium) - -AnnotationAssertion(Annotation( "Wikipedia:Dorsal_mesentery") "The portion of mesentery attached to the greater curvature of the stomach is named the dorsal mesentery (or dorsal mesogastrium, when referring to the portion at the stomach), and the part which suspends the colon is termed the mesocolon. The dorsal mesogastrium develops into the greater omentum.") -AnnotationAssertion( "EHDAA2:0000416") -AnnotationAssertion( "EHDAA:3001") -AnnotationAssertion( "EMAPA:17025") -AnnotationAssertion( "MA:0001618") -AnnotationAssertion( "NCIT:C34142") -AnnotationAssertion( "VHOG:0000352") -AnnotationAssertion( "Wikipedia:Dorsal_mesentery") -AnnotationAssertion(rdfs:label "dorsal mesogastrium") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (extrahepatic part of hepatic duct) AnnotationAssertion( "EMAPA:16844") @@ -56841,6 +66929,18 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (vascular plexus) + +AnnotationAssertion(Annotation( "http://www.medilexicon.com/medicaldictionary.php?t=70052") "A vascular network formed by frequent anastomoses between the blood vessels (arteries or veins) of a part.") +AnnotationAssertion( "AEO:0000219") +AnnotationAssertion( "EHDAA2:0004112") +AnnotationAssertion( "EMAPA:35904") +AnnotationAssertion( "FMA:5900") +AnnotationAssertion( "XAO:0004143") +AnnotationAssertion(rdfs:label "vascular plexus") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (extraembryonic membrane) AnnotationAssertion(Annotation( "ISBN:0073040584") "Intrinsic membrane that arises from embryonic germ layers and grow to surround the developing embryo.") @@ -56882,6 +66982,34 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (2nd arch ectoderm) + +AnnotationAssertion(Annotation( "OBOL:automatic") "An ectoderm that is part of a pharyngeal arch 2.") +AnnotationAssertion( "EHDAA2:0000055") +AnnotationAssertion( "EMAPA:16277") +AnnotationAssertion( "EMAPA:16397") +AnnotationAssertion( "EMAPA:16398") +AnnotationAssertion( "RETIRED_EHDAA2:0000064") +AnnotationAssertion( "VHOG:0001062") +AnnotationAssertion(rdfs:label "2nd arch ectoderm") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (3rd arch ectoderm) + +AnnotationAssertion(Annotation( "OBOL:automatic") "An ectoderm that is part of a pharyngeal arch 3.") +AnnotationAssertion( "EHDAA2:0000072") +AnnotationAssertion( "EMAPA:16400") +AnnotationAssertion( "EMAPA:16582") +AnnotationAssertion( "EMAPA:16584") +AnnotationAssertion( "RETIRED_EHDAA2:0000079") +AnnotationAssertion( "VHOG:0000946") +AnnotationAssertion(rdfs:label "3rd arch ectoderm") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (4th arch ectoderm) AnnotationAssertion(Annotation( "OBOL:automatic") "An ectoderm that is part of a pharyngeal arch 4.") @@ -56896,6 +67024,34 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (2nd arch endoderm) + +AnnotationAssertion(Annotation( "OBOL:automatic") "An endoderm that is part of a pharyngeal arch 2.") +AnnotationAssertion( "EHDAA2:0000061") +AnnotationAssertion( "EMAPA:16274") +AnnotationAssertion( "EMAPA:16276") +AnnotationAssertion( "EMAPA:16278") +AnnotationAssertion( "RETIRED_EHDAA2:0000065") +AnnotationAssertion( "VHOG:0001108") +AnnotationAssertion(rdfs:label "2nd arch endoderm") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (3rd arch endoderm) + +AnnotationAssertion(Annotation( "OBOL:automatic") "An endoderm that is part of a pharyngeal arch 3.") +AnnotationAssertion( "EHDAA2:0000075") +AnnotationAssertion( "EMAPA:16401") +AnnotationAssertion( "EMAPA:16585") +AnnotationAssertion( "EMAPA:16587") +AnnotationAssertion( "RETIRED_EHDAA2:0000080") +AnnotationAssertion( "VHOG:0001081") +AnnotationAssertion(rdfs:label "3rd arch endoderm") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (4th arch endoderm) AnnotationAssertion(Annotation( "OBOL:automatic") "An endoderm that is part of a pharyngeal arch 4.") @@ -56943,19 +67099,6 @@ SubClassOf( ) SubClassOf( ) -# Class: (midgut dorsal mesentery) - -AnnotationAssertion(Annotation( "OBOL:automatic") "A dorsal mesentery that is part of a midgut.") -AnnotationAssertion( "EMAPA:16722") -AnnotationAssertion( "EMAPA:17040") -AnnotationAssertion( "EMAPA:18671") -AnnotationAssertion( "RETIRED_EHDAA2:0001187") -AnnotationAssertion( "SCTID:361434009") -AnnotationAssertion(rdfs:label "midgut dorsal mesentery") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (lens vesicle cavity) AnnotationAssertion(Annotation( "OBOL:automatic") "An anatomical cavity that is part of a lens vesicle.") @@ -56968,6 +67111,32 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (2nd arch mesenchyme) + +AnnotationAssertion(Annotation( "OBOL:automatic") "Mesenchyme that is part of a pharyngeal arch 2.") +AnnotationAssertion( "EHDAA2:0000066") +AnnotationAssertion( "EHDAA:625") +AnnotationAssertion( "EMAPA:16279") +AnnotationAssertion( "FMA:295698") +AnnotationAssertion( "VHOG:0001102") +AnnotationAssertion(rdfs:label "2nd arch mesenchyme") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (3rd arch mesenchyme) + +AnnotationAssertion(Annotation( "OBOL:automatic") "Mesenchyme that is part of a pharyngeal arch 3.") +AnnotationAssertion( "EHDAA2:0000081") +AnnotationAssertion( "EHDAA:1094") +AnnotationAssertion( "EMAPA:16402") +AnnotationAssertion( "FMA:295700") +AnnotationAssertion( "VHOG:0001083") +AnnotationAssertion(rdfs:label "3rd arch mesenchyme") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (4th arch mesenchyme) AnnotationAssertion(Annotation( "OBOL:automatic") "Mesenchyme that is part of a pharyngeal arch 4.") @@ -56994,28 +67163,6 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (foregut duodenum mesentery) - -AnnotationAssertion(Annotation( "OBOL:automatic") "A mesentery of duodenum that is part of a foregut.") -AnnotationAssertion( "EHDAA2:0000564") -AnnotationAssertion(rdfs:label "foregut duodenum mesentery") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) - -# Class: (midgut duodenum mesentery) - -AnnotationAssertion(Annotation( "OBOL:automatic") "A mesentery of duodenum that is part of a midgut.") -AnnotationAssertion( "EHDAA2:0001193") -AnnotationAssertion(rdfs:label "midgut duodenum mesentery") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (hindbrain venous system) AnnotationAssertion(Annotation( "OBOL:automatic") "A venous system that is part of a hindbrain.") @@ -57028,6 +67175,29 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (olfactory system) + +AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") "A sensory system that is capable of olfaction (the sensory perception of smell).") +AnnotationAssertion( "AAO:0000334") +AnnotationAssertion( "AAO:0000978") +AnnotationAssertion( "BILA:0000144") +AnnotationAssertion( "EFO:0001973") +AnnotationAssertion( "EMAPA:36004") +AnnotationAssertion( "FMA:7190") +AnnotationAssertion( "MA:0002445") +AnnotationAssertion( "NCIT:C94501") +AnnotationAssertion( "NLXANAT:090806") +AnnotationAssertion( "SCTID:362290002") +AnnotationAssertion( "TAO:0001149") +AnnotationAssertion( "Wikipedia:Olfactory_system") +AnnotationAssertion( "XAO:0003196") +AnnotationAssertion( "ZFA:0001149") +AnnotationAssertion(rdfs:label "olfactory system") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (chemosensory system) AnnotationAssertion( "BILA:0000139") @@ -57104,6 +67274,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (adventitia) AnnotationAssertion(Annotation( "Wikipedia:Adventitia") "An outermost connective tissue covering of an organ, vessel, or other structure[WP].") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0002010") AnnotationAssertion( "FMA:45635") AnnotationAssertion( "SCTID:30180000") @@ -57127,6 +67298,9 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (acellular membrane) AnnotationAssertion(Annotation( "OBOL:automatic") "An acellular anatomical structure that is the bounding layer of a anatomical structure.") +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "FMA:63871") AnnotationAssertion(rdfs:label "acellular membrane") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) @@ -57146,7 +67320,7 @@ AnnotationAssertion(rdfs:label " SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -57192,6 +67366,27 @@ AnnotationAssertion( "portal system") SubClassOf( ) +# Class: (fasciculus of spinal cord) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A fascicle that is part of a spinal cord.") +AnnotationAssertion( "FMA:75799") +AnnotationAssertion(rdfs:label "fasciculus of spinal cord") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (fasciculus of brain) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A fascicle that is part of a brain.") +AnnotationAssertion( "FMA:83844") +AnnotationAssertion(rdfs:label "fasciculus of brain") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (spinal cord segment) AnnotationAssertion( "BIRNLEX:2665") @@ -57289,6 +67484,26 @@ AnnotationAssertion(rdfs:label " SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (olfactory pit) + +AnnotationAssertion(Annotation( "GO:0060166") Annotation( "Wikipedia:Nasal_pit") "An indentation of the olfactory placode which ends when the pits hollows out to form the nasopharynx[GO].") +AnnotationAssertion( "AAO:0011068") +AnnotationAssertion( "EFO:0003496") +AnnotationAssertion( "EHDAA2:0001295") +AnnotationAssertion( "EHDAA:4772") +AnnotationAssertion( "EMAPA:16800") +AnnotationAssertion( "FMA:295840") +AnnotationAssertion( "SCTID:361485001") +AnnotationAssertion( "Wikipedia:Nasal_pit") +AnnotationAssertion( "XAO:0000275") +AnnotationAssertion( "XAO:0004073") +AnnotationAssertion(rdfs:label "olfactory pit") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (occipital region) AnnotationAssertion(Annotation( "TAO:0001414") Annotation( "UBERONREF:0000007") "Anatomical cluster that is located in the posterior region of the cranium and forms the margin of the foramen magnum and occipital condyles.") @@ -57324,9 +67539,38 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ) +# Class: (external naris) + +AnnotationAssertion(Annotation( "Wikipedia:Nostril") Annotation( "http://orcid.org/0000-0002-6601-2165") "A naris that provides one of the small external openings of the head that give passage to air for breathing.") +AnnotationAssertion( "AAO:0000024") +AnnotationAssertion( "AAO:0000983") +AnnotationAssertion( "AAO:0010358") +AnnotationAssertion( "EHDAA2:0001275") +AnnotationAssertion( "EHDAA:9085") +AnnotationAssertion( "EMAPA:17848") +AnnotationAssertion( "FMA:59645") +AnnotationAssertion( "MA:0001320") +AnnotationAssertion( "NCIT:C33178") +AnnotationAssertion( "SCTID:276165005") +AnnotationAssertion( "TAO:0000550") +AnnotationAssertion( "VHOG:0000544") +AnnotationAssertion( "Wikipedia:Nostril") +AnnotationAssertion( "XAO:0003033") +AnnotationAssertion( "ZFA:0000550") +AnnotationAssertion(rdfs:label "external naris") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (axial skeleton plus cranial skeleton) AnnotationAssertion(Annotation( "FMA:71221") Annotation( "VSAO:0000056") Annotation( "Wikipedia:Axial_skeleton") Annotation( "https://github.com/obophenotype/uberon/issues/44") Annotation( "https://github.com/obophenotype/uberon/wiki/The-axial-skeleton") "Subdivision of skeleton which consists of cranial skeleton, set of all vertebrae, set of all ribs and sternum[FMA, modified].") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0000963") AnnotationAssertion( "EMAPA:17214") AnnotationAssertion( "MA:0000308") @@ -57573,6 +67817,49 @@ SubClassOf( ObjectSomeValuesFrom( SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (nerve fiber) + +AnnotationAssertion(Annotation( "Wikipedia:Nervous_system_fiber") "A threadlike extension of a nerve cell and consists of an axon and myelin sheath (if it is myelinated) in the nervous system. There are nerve fibers in the central nervous system and peripheral nervous system. A nerve fiber may be myelinated and/or unmyelinated. In the central nervous system (CNS), myelin by oligodendroglia cells is formed. Schwann cells form myelin in the peripheral nervous system (PNS). Schwann cells also make a thin covering in an axon without myelin (in the PNS). A peripheral nerve fiber contains an axon, myelin sheath, schwann cells and its endoneurium. There are no endoneurium and schwann cells in the central nervous system.") +AnnotationAssertion( ) +AnnotationAssertion( "BAMS:nfi") +AnnotationAssertion( "FMA:5914") +AnnotationAssertion( "MESH:D009412") +AnnotationAssertion( "SCTID:88545005") +AnnotationAssertion( "Wikipedia:Nervous_system_fiber") +AnnotationAssertion(rdfs:label "nerve fiber") +EquivalentClasses( ObjectUnionOf( )) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (myelinated nerve fiber) + +AnnotationAssertion(Annotation( "ncithesaurus:Myelinated_Nerve_Fiber") "Axons of neurons encased in a lipoproteinaceous material called myelin. (MeSH).") +AnnotationAssertion( ) +AnnotationAssertion( "FMA:5915") +AnnotationAssertion( "GAID:745") +AnnotationAssertion( "MESH:D009413") +AnnotationAssertion( "NCIT:C12627") +AnnotationAssertion( "SCTID:362296008") +AnnotationAssertion(rdfs:label "myelinated nerve fiber") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +DisjointClasses( ) + +# Class: (unmyelinated nerve fiber) + +AnnotationAssertion( ) +AnnotationAssertion( "FMA:5916") +AnnotationAssertion( "GAID:767") +AnnotationAssertion( "MESH:D036421") +AnnotationAssertion( "NCIT:C33835") +AnnotationAssertion( "SCTID:46920005") +AnnotationAssertion(rdfs:label "unmyelinated nerve fiber") +SubClassOf( ) + # Class: (aortico-pulmonary spiral septum) AnnotationAssertion(Annotation( "MP:0010650") Annotation( "Wikipedia:Aorticopulmonary_septum") "The spiral septum that separates the truncus arteriosus into a ventral pulmonary trunk and the dorsal aorta[MP]. The aorticopulmonary septum is developmentally formed from neural crest, specifically the cardiac neural crest, and actively separates the aorta and pulmonary arteries and fuses with the interventricular septum within the heart during development. The actual mechanism of septation of the outflow tract is poorly understood, but is recognized as a dynamic process with contributions from contractile, hemodynamic, and extracellular matrix interactions.") @@ -57609,6 +67896,23 @@ SubClassOf( ObjectSomeValuesFrom( SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (rhombic lip) + +AnnotationAssertion(Annotation( "MGI:anna") Annotation( "MP:0012525") "The posterior section of the developing metencephalon recognized transiently within the vertebrate embryo; the rhombic lip extends posteriorly from the roof of the fourth ventricle to dorsal neuroepithelial cell and can be divided into eight structural units based on rhombomeres 1-8 (r1-r8), recognized at early stages of hindbrain development; producing granule cells and five brainstem nuclei, the rhombic lip plays an important role in developing a complex cerebellar neural system.") +AnnotationAssertion( "DHBA:10664") +AnnotationAssertion( "EHDAA2:0000231") +AnnotationAssertion( "EMAPA:17074") +AnnotationAssertion( "TAO:0001440") +AnnotationAssertion( "Wikipedia:Rhombic_lips") +AnnotationAssertion( "XAO:0004135") +AnnotationAssertion( "ZFA:0001440") +AnnotationAssertion(rdfs:label "rhombic lip") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (common atrial chamber) AnnotationAssertion( "EHDAA:1267") @@ -57618,6 +67922,22 @@ AnnotationAssertion(rdfs:label " SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (future diencephalon) + +AnnotationAssertion(Annotation( "UBERON:cjm") Annotation( "Wikipedia:Diencephalon") "The foremost region of the future forebrain that develops into the diencephalon.") +AnnotationAssertion( "EFO:0003442") +AnnotationAssertion( "EHDAA2:0000600") +AnnotationAssertion( "EHDAA:844") +AnnotationAssertion( "EMAPA:16514") +AnnotationAssertion( "RETIRED_EHDAA2:0000386") +AnnotationAssertion( "TAO:0000574") +AnnotationAssertion( "ZFA:0000574") +AnnotationAssertion(rdfs:label "future diencephalon") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (ethmoid bone primordium) AnnotationAssertion( "EHDAA2:0000456") @@ -57632,6 +67952,16 @@ SubClassOf( ObjectSomeValuesFrom( SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (facio-acoustic VII-VIII preganglion complex) + +AnnotationAssertion( "EHDAA:1477") +AnnotationAssertion( "EMAPA:16660") +AnnotationAssertion( "RETIRED_EHDAA2:0000496") +AnnotationAssertion(rdfs:label "facio-acoustic VII-VIII preganglion complex") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (foregut-midgut junction) AnnotationAssertion(Annotation( "OBOL:automatic") "An anatomical junctions that overlaps the foregut and midgut.") @@ -57690,6 +68020,23 @@ SubClassOf( ObjectSomeValuesFrom( SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (future forebrain) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A presumptive structure that has the potential to develop into a forebrain.") +AnnotationAssertion( "BAMS:Pros") +AnnotationAssertion( "EFO:0003423") +AnnotationAssertion( "EHDAA2:0000661") +AnnotationAssertion( "EHDAA:2643") +AnnotationAssertion( "EMAPA:16640") +AnnotationAssertion( "TAO:0000062") +AnnotationAssertion( "Wikipedia:Prosencephalon") +AnnotationAssertion( "ZFA:0000062") +AnnotationAssertion(rdfs:label "future forebrain") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (future spinal cord) AnnotationAssertion( "EFO:0003438") @@ -57720,6 +68067,18 @@ SubClassOf( ObjectSomeValuesFrom( SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (lingual swellings) + +AnnotationAssertion( "EHDAA2:0000996") +AnnotationAssertion( "EMAPA:17186") +AnnotationAssertion( "VHOG:0000449") +AnnotationAssertion(rdfs:comment "the collection consisting of the two lateral swellings and the medial swelling") +AnnotationAssertion(rdfs:label "lingual swellings") +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (mouth-foregut junction) AnnotationAssertion(Annotation( "OBOL:automatic") "An anatomical junctions that overlaps the mouth and foregut.") @@ -57761,7 +68120,7 @@ AnnotationAssertion( "The notochordal process grows cranially until it reaches the prechordal plate, the future site of the mouth. In this area the ectoderm is attached directly to the endoderm without intervening mesoderm. This area is known as the oropharyngeal membrane, and it will break down to become the mouth. At the other end of the primitive streak the ectoderm is also fused directly to the endoderm; this is known as the cloacal membrane (proctodeum), or primordial anus.") AnnotationAssertion(rdfs:label "notochordal process") SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (orbital fissure) @@ -57777,6 +68136,21 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (otic pit) + +AnnotationAssertion(Annotation( "ISBN:0-683-40008-8") Annotation( "MP:0011172") "The pair of depressions of thickened otic placode epithelium, that further develops into the otic vesicles.") +AnnotationAssertion( "EHDAA2:0001336") +AnnotationAssertion( "EHDAA:929") +AnnotationAssertion( "EMAPA:16536") +AnnotationAssertion( "FMA:302911") +AnnotationAssertion( "NCIT:C34238") +AnnotationAssertion( "VHOG:0001147") +AnnotationAssertion( "Wikipedia:Otic_pit") +AnnotationAssertion(rdfs:label "otic pit") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (pleuroperitoneal canal) AnnotationAssertion(Annotation( "ISBN:0124020607") Annotation( "VHOG:0001505") "Each of the canals that links the peritoneal cavity and the caudal part of a pleural cavity.") @@ -57790,7 +68164,7 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -57812,6 +68186,21 @@ SubClassOf( ObjectSomeValuesFrom( SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (early prosencephalic vesicle) + +AnnotationAssertion(Annotation( "https://orcid.org/0000-0002-6601-2165") "Future brain vesicle that gives rise to telencephalic ventricle/lateral ventricles and 3rd ventricle.") +AnnotationAssertion( "DHBA:10595") +AnnotationAssertion( "EHDAA2:0001571") +AnnotationAssertion( "EHDAA:1356") +AnnotationAssertion( "EMAPA:16521") +AnnotationAssertion( "SCTID:361480006") +AnnotationAssertion( "TAO:0001259") +AnnotationAssertion( "VHOG:0000644") +AnnotationAssertion( "ZFA:0001259") +AnnotationAssertion(rdfs:label "early prosencephalic vesicle") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (spleen primordium) AnnotationAssertion(Annotation( "ISBN:0123747295") Annotation( "MP:0011263") "A dense syncitial-like mesenchymal thickening in the dorsal mesogastrium[ISBN]. the embryonic connective tissue made up of loosely aggregated mesenchymal cells, supported by interlaminar jelly, that gives rise to the developing spleen[MP].") @@ -57821,11 +68210,8 @@ AnnotationAssertion( "XAO:0000326") AnnotationAssertion(rdfs:label "spleen primordium") SubClassOf( ) -SubClassOf( ) SubClassOf( ) SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (future trigeminal ganglion) @@ -57887,6 +68273,24 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (lateral ventricle choroid plexus stroma) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A choroid plexus stroma that is part of a lateral ventricle.") +AnnotationAssertion( "MA:0000963") +AnnotationAssertion(rdfs:label "lateral ventricle choroid plexus stroma") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (fourth ventricle choroid plexus stroma) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A choroid plexus stroma that is part of a fourth ventricle.") +AnnotationAssertion( "MA:0000985") +AnnotationAssertion(rdfs:label "fourth ventricle choroid plexus stroma") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (communicating artery) AnnotationAssertion(Annotation( "ncithesaurus:Communicating_Artery") "An artery that connects two larger arteries.") @@ -57989,7 +68393,7 @@ AnnotationAssertion( "MIAA:0000049") AnnotationAssertion(rdfs:label "pharynx") SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (tunica media of pulmonary trunk) @@ -58003,6 +68407,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (left ventricle myocardium) AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") "A myocardium that is part of a left ventricle of a heart.") +AnnotationAssertion( ) AnnotationAssertion( "FMA:9558") AnnotationAssertion( "MA:0002983") AnnotationAssertion( "SCTID:362021000") @@ -58015,6 +68420,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (right ventricle myocardium) AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") "A myocardium that is part of a right ventricle of a heart.") +AnnotationAssertion( ) AnnotationAssertion( "FMA:9535") AnnotationAssertion( "MA:0002984") AnnotationAssertion( "SCTID:362020004") @@ -58024,6 +68430,16 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (diencephalic nucleus) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A nucleus of brain that is part of a diencephalon.") +AnnotationAssertion( "TAO:0002191") +AnnotationAssertion( "ZFA:0001659") +AnnotationAssertion(rdfs:label "diencephalic nucleus") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (trabecula carnea of right ventricle) AnnotationAssertion(Annotation( "OBOL:automatic") "A trabecula carnea that is part of a heart right ventricle.") @@ -58071,7 +68487,7 @@ AnnotationAssertion(rdfs:label " EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (presumptive blood) @@ -58108,7 +68524,7 @@ AnnotationAssertion(rdfs:label " EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (presumptive mesoderm) @@ -58122,7 +68538,7 @@ AnnotationAssertion(rdfs:label " EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (muscular coat) @@ -58133,9 +68549,21 @@ AnnotationAssertion( "Wikipedia:Muscular_layer") AnnotationAssertion(rdfs:label "muscular coat") SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (carotid canal) + +AnnotationAssertion(Annotation( "Wikipedia:Carotid_canal") "On the interior surface of the temporal bone, behind the rough surface of the apex, is the large circular aperture of the carotid canal, which ascends at first vertically, and then, making a bend, runs horizontally forward and medialward. It transmits into the cranium, the internal carotid artery, and the carotid plexus of nerves. Sympathetics to the head also pass through the carotid canal. They have several motor functions: raise the eyelid (superior tarsal muscle), dilate pupil, innervate sweat glands of face and scalp and constricts blood vessels in head[WP].") +AnnotationAssertion( "EMAPA:18707") +AnnotationAssertion( "FMA:55805") +AnnotationAssertion( "Wikipedia:Carotid_canal") +AnnotationAssertion(rdfs:label "carotid canal") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (central tendon of diaphragm) AnnotationAssertion(Annotation( "MGI:csmith") Annotation( "MP:0012061") "The three-lobed cloverleaf-shaped aponeurosis situated at the center of the diaphragm; the central tendon is fused with the fibrous pericardium that provides attachment for the muscle fibers.") @@ -58175,9 +68603,48 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (cerebellum vasculature) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A vasculature that is part of a cerebellum.") +AnnotationAssertion( "FMA:268519") +AnnotationAssertion(rdfs:label "cerebellum vasculature") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (median lingual swelling) + +AnnotationAssertion(Annotation( "Wikipedia:Tuberculum_impar") "During the third week of embryological development there appears, immediately behind the ventral ends of the two halves of the mandibular arch, a rounded swelling named the tuberculum impar, which was described by His as undergoing enlargement to form the buccal part of the tongue. More recent researches, however, show that this part of the tongue is mainly, if not entirely, developed from a pair of lateral swellings which rise from the inner surface of the mandibular arch and meet in the middle line. The site of their meeting remains post-embryonically as the median sulcus of the tongue. The tuberculum impar is said to form the central part of the tongue immediately in front of the foramen cecum, but Hammar insists that it is purely a transitory structure and forms no part of the adult tongue[WP, Gray's].") +AnnotationAssertion( "EHDAA2:0001081") +AnnotationAssertion( "EMAPA:17187") +AnnotationAssertion( "FMA:312476") +AnnotationAssertion( "SCTID:308821003") +AnnotationAssertion( "VHOG:0000730") +AnnotationAssertion( "Wikipedia:Tuberculum_impar") +AnnotationAssertion(rdfs:comment "The thyroid initially develops caudal to the tuberculum impar . This embryonic swelling arises from the first pharyngeal arch and occurs midline on the floor of the developing pharynx, eventually helping form the tongue as the 2 lateral lingual swellings overgrow it. [http://emedicine.medscape.com/article/845125-overview]") +AnnotationAssertion(rdfs:label "median lingual swelling") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (lateral lingual swelling) + +AnnotationAssertion(Annotation( "Wikipedia:Lateral_lingual_swelling") "During the third week there appears, immediately behind the ventral ends of the two halves of the mandibular arch, a rounded swelling named the tuberculum impar, which was described by His as undergoing enlargement to form the buccal part of the tongue. More recent researches, however, show that this part of the tongue is mainly, if not entirely, developed from a pair of lateral swellings (or distal tongue bud) which rise from the inner surface of the mandibular arch and meet in the middle line.") +AnnotationAssertion( "EHDAA2:0000911") +AnnotationAssertion( "EMAPA:17189") +AnnotationAssertion( "FMA:313628") +AnnotationAssertion( "VHOG:0000731") +AnnotationAssertion( "Wikipedia:Lateral_lingual_swelling") +AnnotationAssertion(rdfs:label "lateral lingual swelling") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (corneo-scleral junction) AnnotationAssertion(Annotation( "MP:0013477") "The edge of the cornea where it joins the sclera; the limbus is a common site for the occurrence of corneal epithelial neoplasm.") +AnnotationAssertion( ) AnnotationAssertion( "EFO:0001403") AnnotationAssertion( "FMA:58342") AnnotationAssertion( "GAID:896") @@ -58205,6 +68672,21 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (nasal skeleton) + +AnnotationAssertion(Annotation( "AAO:0000320") "Structural framework that provides support to the nasal sacs and ducts.") +AnnotationAssertion( "AAO:0000320") +AnnotationAssertion( "FMA:60116") +AnnotationAssertion( "SCTID:281486007") +AnnotationAssertion(rdfs:label "nasal skeleton") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (areolar connective tissue) AnnotationAssertion(Annotation( "FMA:63897") "Loose connective tissue located at the outer and inner layers of organs. Examples: submucosal connective tissue, tunica adventitia of artery, papillary dermis, superficial fascia of dorsum of hand.") @@ -58246,12 +68728,13 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (central vein of liver) AnnotationAssertion(Annotation( "ZFA:0005168") "Vein that is central to a lobule in the liver.") +AnnotationAssertion( ) AnnotationAssertion( "FMA:17544") AnnotationAssertion( "NCIT:C32281") AnnotationAssertion( "SCTID:272023004") @@ -58382,6 +68865,17 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ) +# Class: (tongue squamous epithelium) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A squamous epithelium that is part of a tongue.") +AnnotationAssertion( "MA:0002786") +AnnotationAssertion(rdfs:label "tongue squamous epithelium") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (esophagus squamous epithelium) AnnotationAssertion(Annotation( "OBOL:automatic") "A squamous epithelium that is part of a esophagus.") @@ -58468,9 +68962,21 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (inner ear epithelium) + +AnnotationAssertion(Annotation( "MGI:csmith") Annotation( "MP:0003308") "The epithelial cell layer containing the sensory hair cells and their associated sensory nerve terminals.") +AnnotationAssertion( "EMAPA:32883") +AnnotationAssertion( "MA:0001189") +AnnotationAssertion(rdfs:label "inner ear epithelium") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (ovary stroma) AnnotationAssertion(Annotation( "Wikipedia:Stroma_of_ovary") "The stroma of the ovary is a peculiar soft tissue, abundantly supplied with blood vessels, consisting for the most part of spindle-shaped cells with a small amount of ordinary connective tissue. These cells have been regarded by some anatomists as unstriped muscle cells, which, indeed, they most resemble; by others as connective-tissue cells. On the surface of the organ this tissue is much condensed, and forms a layer composed of short connective-tissue fibers, with fusiform cells between them. The stroma of the ovary may contain interstitial cells resembling those of the testis.") +AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-1246") AnnotationAssertion( "EMAPA:28880") AnnotationAssertion( "FMA:18626") @@ -58580,6 +69086,16 @@ AnnotationAssertion(rdfs:label " SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (hyoid neural crest) + +AnnotationAssertion(Annotation( "ZFA:0007065") "Cranial neural crest that migrates into the hyoid arch.") +AnnotationAssertion( "TAO:0007065") +AnnotationAssertion( "XAO:0000025") +AnnotationAssertion( "ZFA:0007065") +AnnotationAssertion(rdfs:label "hyoid neural crest") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (primary circulatory organ) AnnotationAssertion(Annotation( "GO:0007507") "A hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood or analogs[GO,modified].") @@ -58592,6 +69108,75 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (pharyngeal pouch 1) + +AnnotationAssertion(Annotation( "ISBN:0124020607") Annotation( "PMID:16313389") Annotation( "VHOG:0000970") "A pharyngeal pouch that is between pharyngeal arches 1 and 2.") +AnnotationAssertion( "AAO:0011114") +AnnotationAssertion( "EFO:0003631") +AnnotationAssertion( "EHDAA2:0000016") +AnnotationAssertion( "EMAPA:16124") +AnnotationAssertion( "EMAPA:16125") +AnnotationAssertion( "FMA:295668") +AnnotationAssertion( "NCIT:C34176") +AnnotationAssertion( "SCTID:345248006") +AnnotationAssertion( "TAO:0001128") +AnnotationAssertion( "VHOG:0000555") +AnnotationAssertion( "VHOG:0000970") +AnnotationAssertion( "Wikipedia:Pharyngeal_pouch_(embryology)#First_pouch") +AnnotationAssertion( "XAO:0000102") +AnnotationAssertion( "ZFA:0001128") +AnnotationAssertion(rdfs:label "pharyngeal pouch 1") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (pharyngeal pouch 2) + +AnnotationAssertion(Annotation( "ISBN:0124020607") Annotation( "PMID:16313389") "A pharyngeal puch that is between the pharyngeal arches 2 and 3.") +AnnotationAssertion( "AAO:0011115") +AnnotationAssertion( "EFO:0003633") +AnnotationAssertion( "EHDAA2:0000058") +AnnotationAssertion( "EMAPA:16275") +AnnotationAssertion( "FMA:295676") +AnnotationAssertion( "NCIT:C34289") +AnnotationAssertion( "RETIRED_EHDAA2:0000060") +AnnotationAssertion( "SCTID:345349000") +AnnotationAssertion( "TAO:0001130") +AnnotationAssertion( "VHOG:0000561") +AnnotationAssertion( "VHOG:0000967") +AnnotationAssertion( "Wikipedia:Pharyngeal_pouch_(embryology)#Second_pouch") +AnnotationAssertion( "XAO:0000247") +AnnotationAssertion( "ZFA:0001130") +AnnotationAssertion(rdfs:label "pharyngeal pouch 2") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (pharyngeal pouch 3) + +AnnotationAssertion(Annotation( "ISBN:0124020607") Annotation( "PMID:16313389") Annotation( "Wikipedia:Pharyngeal_pouch_(embryology)#Third_pouch") "A pharyngeal pouch that between pharyngeal arches 3 and 4.") +AnnotationAssertion( "AAO:0011116") +AnnotationAssertion( "EFO:0003634") +AnnotationAssertion( "EHDAA2:0000077") +AnnotationAssertion( "EMAPA:16586") +AnnotationAssertion( "FMA:295682") +AnnotationAssertion( "NCIT:C34311") +AnnotationAssertion( "RETIRED_EHDAA2:0000076") +AnnotationAssertion( "SCTID:345450001") +AnnotationAssertion( "TAO:0001131") +AnnotationAssertion( "VHOG:0000966") +AnnotationAssertion( "VHOG:0001030") +AnnotationAssertion( "Wikipedia:Pharyngeal_pouch_(embryology)#Third_pouch") +AnnotationAssertion( "XAO:0000251") +AnnotationAssertion( "ZFA:0001131") +AnnotationAssertion(rdfs:label "pharyngeal pouch 3") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (trunk ganglion) AnnotationAssertion(Annotation( "ZFIN:curator") "Ganglion which is located in the trunk.") @@ -58615,6 +69200,30 @@ AnnotationAssertion(rdfs:label " SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (left internal carotid artery) + +AnnotationAssertion(Annotation( "OBOL:automatic") "An internal carotid artery that branching_part_of a left common carotid artery plus branches.") +AnnotationAssertion( "EMAPA:16329") +AnnotationAssertion( "FMA:4062") +AnnotationAssertion( "SCTID:161452006") +AnnotationAssertion(rdfs:label "left internal carotid artery") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (right internal carotid artery) + +AnnotationAssertion(Annotation( "OBOL:automatic") "An internal carotid artery that branching_part_of a right common carotid artery plus branches.") +AnnotationAssertion( "EMAPA:16330") +AnnotationAssertion( "FMA:3949") +AnnotationAssertion( "SCTID:161251001") +AnnotationAssertion(rdfs:label "right internal carotid artery") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (embryonic post-anal tail) AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") "An embryonic structure that will either develop into a post-anal tail or recede into a vestigial remnant of the tail.") @@ -58672,6 +69281,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (lamina propria of mucosa of colon) AnnotationAssertion(Annotation( "OBOL:automatic") "A lamina propria that is part of a colonic mucosa.") +AnnotationAssertion( ) AnnotationAssertion( "EMAPA:27395") AnnotationAssertion( "FMA:15657") AnnotationAssertion( "MA:0003196") @@ -58711,6 +69321,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (tracheobronchial tree) AnnotationAssertion(Annotation( "Wikipedia:Tracheobronchial_tree") "The structure from the trachea, bronchi, and bronchioles that forms the airways that supply air to the lungs. The lining of the tracheobronchial tree consists of ciliated columnar epithelial cells.") +AnnotationAssertion( ) AnnotationAssertion( "FMA:7393") AnnotationAssertion( "NCIT:C117875") AnnotationAssertion( "SCTID:361384001") @@ -58902,7 +69513,7 @@ AnnotationAssertion(rdfs:label " EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (presumptive hindbrain) @@ -58997,6 +69608,28 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (presumptive forebrain midbrain boundary) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A presumptive structure that has the potential to develop into a forebrain-midbrain boundary.") +AnnotationAssertion( "EFO:0003463") +AnnotationAssertion( "TAO:0001368") +AnnotationAssertion( "ZFA:0001368") +AnnotationAssertion(rdfs:label "presumptive forebrain midbrain boundary") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (presumptive rhombomere 1) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A presumptive structure that has the potential to develop into a rhombomere 1.") +AnnotationAssertion( "TAO:0001207") +AnnotationAssertion( "ZFA:0001207") +AnnotationAssertion(rdfs:label "presumptive rhombomere 1") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (pectoral appendage blood vessel) AnnotationAssertion(Annotation( "OBOL:automatic") "A blood vessel that is part of a pectoral appendage.") @@ -59050,6 +69683,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (pancreatic lobule) AnnotationAssertion(Annotation( "ISBN:0123813611") "A dense accumulation of exocrine glands in the pancreas often surrounding islets of Langerhans.") +AnnotationAssertion( ) AnnotationAssertion( "FMA:16012") AnnotationAssertion( "MA:0000721") AnnotationAssertion(rdfs:label "pancreatic lobule") @@ -59062,6 +69696,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (pancreatic duct) AnnotationAssertion(Annotation( "GOC:cvs") Annotation( "GOC:ymb") Annotation( "Wikipedia:Pancreatic_duct") Annotation( "https://github.com/obophenotype/uberon/issues/1250") Annotation( "https://orcid.org/0000-0002-2244-7917") Annotation( "https://orcid.org/0000-0002-6601-2165") Annotation( "https://orcid.org/0000-0002-9900-7880") "A duct that collects and carries secretions of the exocrine pancreas to the intestine.") +AnnotationAssertion( ) AnnotationAssertion( "EHDAA:9194") AnnotationAssertion( "EMAPA:32952") AnnotationAssertion( "FMA:10419") @@ -59080,6 +69715,25 @@ SubClassOf( ObjectSomeValuesFrom( SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (surface of tongue) + +AnnotationAssertion(Annotation( "OBOL:automatic") "An anatomical surface that is part of a tongue.") +AnnotationAssertion( "FMA:54647") +AnnotationAssertion( "SCTID:314870004") +AnnotationAssertion(rdfs:label "surface of tongue") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (superior surface of tongue) + +AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") "The upper (superior) side of the tongue.") +AnnotationAssertion( "FMA:54646") +AnnotationAssertion(rdfs:label "superior surface of tongue") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (roof of mouth) AnnotationAssertion(Annotation( "https://orcid.org/0000-0002-6601-2165") "A multi-tissue structure consisting of bone and soft tissue that forms a part of the roof of the oral cavity. In mammals this is the combination of the primary palate (premaxilla) and the secondary palate. In early tetrapods it consists of the vomer, pterygoid, parasphenoid, palatine and ectopterygoid bones.") @@ -59103,7 +69757,7 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (enveloping layer of ectoderm) @@ -59140,7 +69794,7 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (nucleus of midbrain tegmentum) @@ -59171,6 +69825,17 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (keratin-based acellular structure) + +AnnotationAssertion(Annotation( "AEO:JB") "Acellular anatomical structure whose predominant constituent is keratin.") +AnnotationAssertion( "AEO:0000099") +AnnotationAssertion( "EHDAA2:0003099") +AnnotationAssertion(rdfs:label "keratin-based acellular structure") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (epithelial sac) AnnotationAssertion(Annotation( "AEO:JB") Annotation( "UBERONREF:0000001") "An epithelial tube that is open at one end only.") @@ -59314,9 +69979,32 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (future meninx) + +AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") "A developing mesenchymal capsule that covers the developing brain and spinal cord and is the precursor of the meningeal cluster. In mammals this gives rise to the arachnoid mater, pia mater and dura mater. In cyclostomes and fishes, the future meninx gives rise to a single meningeal layer, the primitive meninx.") +AnnotationAssertion( "EHDAA2:0004453") +AnnotationAssertion(rdfs:label "future meninx") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (endomeninx) + +AnnotationAssertion(Annotation( "ISBN:9781607950325") "The innermost layer of the mesenchymal capsule that surrounds the developing brain, primarily of neural crest origin. The endomeninx forms the leptomeninx.") +AnnotationAssertion(rdfs:label "endomeninx") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (anatomical junction) AnnotationAssertion(Annotation( "http://code.google.com/p/caro2/issues/detail?id=15") "An anatomical structure that connects two structures.") +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "FMA:5898") AnnotationAssertion( "SCTID:91833003") AnnotationAssertion(rdfs:label "anatomical junction") @@ -59356,6 +70044,19 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (gustatory pore) + +AnnotationAssertion(Annotation( "http://www.mondofacto.com/facts/dictionary?gustatory+pore") "The minute opening of a taste bud on the surface of the oral mucosa through which the gustatory hairs of the specialised neuroepithelial gustatory cells project.") +AnnotationAssertion( "FMA:63589") +AnnotationAssertion( "NCIT:C33738") +AnnotationAssertion( "SCTID:368724008") +AnnotationAssertion(rdfs:label "gustatory pore") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (bone of reproductive organ) AnnotationAssertion(Annotation( "OBOL:automatic") Annotation( "https://github.com/obophenotype/uberon/issues/1158") "A bone that is part of a reproductive organ.") @@ -59384,7 +70085,7 @@ AnnotationAssertion( "transudate") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -59401,6 +70102,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (vascular system) AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") "Anatomical system that consists of all blood and lymph vessels.") +AnnotationAssertion( ) AnnotationAssertion( "BTO:0001085") AnnotationAssertion( "CALOHA:TS-2053") AnnotationAssertion( "EHDAA2:0004520") @@ -59431,6 +70133,7 @@ AnnotationAssertion( "NCIT:C12418") AnnotationAssertion( "SCTID:361355005") AnnotationAssertion( "WikipediaCategory:Head_and_neck") +AnnotationAssertion( "ZFA:0001114") AnnotationAssertion( "galen:HeadAndNeck") AnnotationAssertion(rdfs:label "craniocervical region") SubClassOf( ) @@ -59452,7 +70155,7 @@ AnnotationAssertion(rdfs:label " EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -59465,21 +70168,21 @@ AnnotationAssertion(rdfs:label " EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (peritoneal mesentery) +# Class: (external nose) -AnnotationAssertion(Annotation( "UBERON:cjm") "Mesentery that is located in the peritoneum.") -AnnotationAssertion( "FMA:20570") -AnnotationAssertion( "TAO:0005129") -AnnotationAssertion( "XAO:0000138") -AnnotationAssertion( "ZFA:0005129") -AnnotationAssertion(rdfs:label "peritoneal mesentery") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") "External part of the nose containing the external nares.") +AnnotationAssertion( "FMA:59515") +AnnotationAssertion( "NCIT:C32566") +AnnotationAssertion( "SCTID:265785009") +AnnotationAssertion(rdfs:label "external nose") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (girdle bone/zone) @@ -59494,6 +70197,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (pectoral girdle bone) AnnotationAssertion(Annotation( "OBOL:automatic") "A bone that is part of a pectoral girdle region.") +AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35669") AnnotationAssertion( "MA:0000292") AnnotationAssertion(rdfs:label "pectoral girdle bone") @@ -59607,7 +70311,7 @@ AnnotationAssertion(rdfs:label " EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (surface of cartilage) @@ -59702,6 +70406,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (duodenal epithelium) AnnotationAssertion(Annotation( "OBOL:automatic") "An epithelium that is part of a duodenum.") +AnnotationAssertion( ) AnnotationAssertion( "CALOHA:TS-2087") AnnotationAssertion( "EMAPA:19078") AnnotationAssertion( "FMA:17231") @@ -59722,6 +70427,18 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (nasal muscle) + +AnnotationAssertion(Annotation( "OBOL:automatic") "Any muscle organ that is part of an nose.") +AnnotationAssertion( "FMA:73758") +AnnotationAssertion( "NCIT:C33158") +AnnotationAssertion( "SCTID:244730009") +AnnotationAssertion(rdfs:label "nasal muscle") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (inner cell mass derived epiblast) AnnotationAssertion(Annotation( "MP:0003886") "An embryonic structure that is derived from the inner cell mass and lies above the hypoblast and gives rise to the three primary germ layers.") @@ -59747,7 +70464,7 @@ AnnotationAssertion(rdfs:label " SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (embryonic head) @@ -59867,6 +70584,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (pulmonary alveolar parenchyma) AnnotationAssertion(Annotation( "MP:0010901") "The distinguishing cell types of the lung alveolar tissue, including pulmonary epithelial cells (pneumocytes), alveolar capillary endothelial cells, interstitial cells (fibroblasts) and alveolar macrophages.") +AnnotationAssertion( ) AnnotationAssertion(rdfs:label "pulmonary alveolar parenchyma") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) @@ -59879,6 +70597,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (pulmonary acinus) AnnotationAssertion(Annotation( "MP:0010911") Annotation( "PMID:2014492") Annotation( "PMID:3382030") Annotation( "Wikipedia:Acinus#The_Lungs") "The largest lung subunit in which all airways participate in gas exchange, and it is composed of the parenchyma of the respiratory bronchioles, alveolar ducts, and alveoli.") +AnnotationAssertion( ) AnnotationAssertion( "FMA:7313") AnnotationAssertion( "NCIT:C33426") AnnotationAssertion( "SCTID:361365004") @@ -59908,6 +70627,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (pulmonary vascular system) AnnotationAssertion(Annotation( "ISBN:0073040584") Annotation( "Wikipedia:Pulmonary_circulation") "The part of the cardiovascular system consisting of all pulmonary arteries and all pulmonary veins.") +AnnotationAssertion( ) AnnotationAssertion( "FMA:45621") AnnotationAssertion( "Wikipedia:Pulmonary_circulation") AnnotationAssertion(rdfs:label "pulmonary vascular system") @@ -59915,9 +70635,22 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (rectal venous plexus) + +AnnotationAssertion(Annotation( "Wikipedia:Rectal_venous_plexus") "The hemorrhoidal plexus (or rectal venous plexus) surrounds the rectum, and communicates in front with the vesical venous plexus in the male, and the uterovaginal plexus in the female. A free communication between the portal and systemic venous systems is established through the hemorrhoidal plexus.") +AnnotationAssertion( "FMA:18933") +AnnotationAssertion( "NCIT:C32728") +AnnotationAssertion( "SCTID:303051005") +AnnotationAssertion( "Wikipedia:Rectal_venous_plexus") +AnnotationAssertion(rdfs:label "rectal venous plexus") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (splanchnocranium) AnnotationAssertion(Annotation( "ISBN:0073040584") Annotation( "Wikipedia:Facial_skeleton") Annotation( "https://orcid.org/0000-0002-6601-2165") "Subdivision of endoskeleton derived from pharyngeal arches.") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0010157") AnnotationAssertion( "TAO:0001216") AnnotationAssertion( "VHOG:0000315") @@ -59931,6 +70664,20 @@ SubClassOf( ObjectSomeValuesFrom( SubClassOf( ObjectSomeValuesFrom( )) DisjointClasses( ) +# Class: (post-hyoid pharyngeal arch) + +AnnotationAssertion(Annotation( "https://orcid.org/0000-0002-6601-2165") "A pharyngeal arch that is posterior to the hyoid arch. i.e. any pharyngeal arch with a number 3 or higher.") +AnnotationAssertion( "AAO:0010362") +AnnotationAssertion( "BTO:0002152") +AnnotationAssertion( "EFO:0003694") +AnnotationAssertion( "TAO:0001597") +AnnotationAssertion( "XAO:0000099") +AnnotationAssertion( "ZFA:0001613") +AnnotationAssertion(rdfs:label "post-hyoid pharyngeal arch") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (dermal bone) AnnotationAssertion(Annotation( "GO_REF:0000034") Annotation( "VSAO:0000130") Annotation( "http://dx.plos.org/10.1371/journal.pone.0051070") Annotation( "https://github.com/obophenotype/uberon/issues/267") "Skeletal element that forms superficially in the organism, usually in association with the ectoderm[VSAO].") @@ -60066,9 +70813,32 @@ AnnotationAssertion(rdfs:label " SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (geniculate placode) + +AnnotationAssertion(Annotation( "NCBIBook:NBK53175") "Rostralmost epibranchial placode. Associated with 1st branchial cleft.") +AnnotationAssertion( "EHDAA2:0004206") +AnnotationAssertion( "TAO:0001295") +AnnotationAssertion( "XAO:0004211") +AnnotationAssertion( "ZFA:0001295") +AnnotationAssertion(rdfs:comment "Taxonomic equivalence to EHDAA2 class made on basis of shared development: gives rise to geniculate ganglion") +AnnotationAssertion(rdfs:label "geniculate placode") +SubClassOf( ) + +# Class: (petrosal placode) + +AnnotationAssertion(Annotation( "NCBIBook:NBK53175") "Epibranchial placode between geniculate and nodose. Associated with 2nd branchial cleft.") +AnnotationAssertion( "EHDAA2:0004207") +AnnotationAssertion( "TAO:0001296") +AnnotationAssertion( "XAO:0004212") +AnnotationAssertion( "ZFA:0001296") +AnnotationAssertion(rdfs:comment "Taxonomic equivalence to EHDAA2 class made on basis of shared development: gives rise to glossopharyngeal ganglion") +AnnotationAssertion(rdfs:label "petrosal placode") +SubClassOf( ) + # Class: (epibranchial ganglion) AnnotationAssertion(Annotation( "PMID:20133851") Annotation( "ZFIN:curator") "Cranial ganglion which develops from an epibranchial placode.") +AnnotationAssertion( ) AnnotationAssertion( "TAO:0001555") AnnotationAssertion( "ZFA:0001555") AnnotationAssertion(rdfs:comment "Epibranchial ganglia orchestrate the development of the cranial neurogenic crest") @@ -60197,6 +70967,27 @@ AnnotationAssertion( "embryonic nasal process") SubClassOf( ) +# Class: (dorsum of tongue) + +AnnotationAssertion(Annotation( "http://www.drugs.com/dict/dorsum-of-tongue.html") "The superior surface of the tongue divided by the sulcus terminalis into an anterior two-thirds, the presulcal part (pars presulcalis). and a posterior one-third, the postsulcal part (pars postsulcalis).") +AnnotationAssertion( "FMA:54651") +AnnotationAssertion( "NCIT:C32482") +AnnotationAssertion( "SCTID:66938003") +AnnotationAssertion(rdfs:label "dorsum of tongue") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (associated mesenchyme of otic placode) + +AnnotationAssertion(Annotation( "OBOL:automatic") "Mesenchyme that is part of a otic placode.") +AnnotationAssertion( "EHDAA2:0001340") +AnnotationAssertion( "EMAPA:16196") +AnnotationAssertion(rdfs:label "associated mesenchyme of otic placode") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (ectoderm of buccopharyngeal membrane) AnnotationAssertion(Annotation( "OBOL:automatic") "An ectoderm that is part of a buccopharyngeal membrane.") @@ -60227,17 +71018,6 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (mesentery of foregut-midgut junction) - -AnnotationAssertion(Annotation( "OBOL:automatic") "A mesentery that is part of a foregut-midgut junction.") -AnnotationAssertion( "EHDAA2:0000575") -AnnotationAssertion( "EMAPA:16365") -AnnotationAssertion( "VHOG:0000430") -AnnotationAssertion(rdfs:label "mesentery of foregut-midgut junction") -EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) - # Class: (pharyngeal arch mesenchymal region) AnnotationAssertion(Annotation( "https://orcid.org/0000-0002-6601-2165") "A portion of mesenchymal tissue associated with an individual pharyngeal arch.") @@ -60245,7 +71025,7 @@ AnnotationAssertion( "FMA:295694") AnnotationAssertion(rdfs:label "pharyngeal arch mesenchymal region") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) -SubClassOf( ) +SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -60265,6 +71045,19 @@ SubClassOf( ObjectSomeValuesFrom( SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (periotic mesenchyme) + +AnnotationAssertion(Annotation( "PMID:3794595") Annotation( "XAO:0004474") Annotation( "XAO:curators") "Anatomical region that surrounds the otic vesicle.") +AnnotationAssertion( "EHDAA2:0001343") +AnnotationAssertion( "EMAPA:16670") +AnnotationAssertion( "XAO:0004474") +AnnotationAssertion(rdfs:label "periotic mesenchyme") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (mesenchyme of fronto-nasal process) AnnotationAssertion(Annotation( "MP:0011266") "The embryonic connective tissue made up of loosely aggregated mesenchymal cells, supported by interlaminar jelly, that gives rise to the frontonasal region of the head.") @@ -60310,6 +71103,19 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (lateral lingual swelling epithelium) + +AnnotationAssertion(Annotation( "OBOL:automatic") "An epithelium that is part of a lateral lingual swelling.") +AnnotationAssertion( "EHDAA2:0000913") +AnnotationAssertion( "EMAPA:17190") +AnnotationAssertion( "FMA:313717") +AnnotationAssertion(rdfs:label "lateral lingual swelling epithelium") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (maxillary process mesenchyme) AnnotationAssertion(Annotation( "OBOL:automatic") "Mesenchyme that is part of a maxillary prominence.") @@ -60322,6 +71128,28 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (vascular element of left lung) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A vascular plexus that is part of a left lung.") +AnnotationAssertion( "EHDAA2:0000963") +AnnotationAssertion( "EMAPA:17660") +AnnotationAssertion(rdfs:label "vascular element of left lung") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (vascular element of right lung) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A vascular plexus that is part of a right lung.") +AnnotationAssertion( "EHDAA2:0001757") +AnnotationAssertion( "EMAPA:17668") +AnnotationAssertion(rdfs:label "vascular element of right lung") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (hepatic sinusoid of left of lobe of liver) AnnotationAssertion(Annotation( "OBOL:automatic") "A hepatic sinusoid that is part of a left lobe of liver.") @@ -60426,6 +71254,16 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (diencephalon mantle layer) + +AnnotationAssertion( "EHDAA2:0000397") +AnnotationAssertion( "EMAPA:16906") +AnnotationAssertion( "VHOG:0000912") +AnnotationAssertion(rdfs:label "diencephalon mantle layer") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (midbrain mantle layer) AnnotationAssertion( "EHDAA2:0001172") @@ -60476,6 +71314,16 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (forebrain neural plate) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A neural plate that develops_from a future forebrain.") +AnnotationAssertion( "TAO:0007018") +AnnotationAssertion( "ZFA:0007018") +AnnotationAssertion(rdfs:label "forebrain neural plate") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (midbrain neural plate) AnnotationAssertion(Annotation( "OBOL:automatic") "A neural plate that develops_from a presumptive midbrain.") @@ -60555,6 +71403,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (trachea non-cartilage connective tissue) +AnnotationAssertion( ) AnnotationAssertion( "EMAPA:35878") AnnotationAssertion( "MA:0001859") AnnotationAssertion(rdfs:label "trachea non-cartilage connective tissue") @@ -60613,14 +71462,15 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -# Class: (gut mesentery) +# Class: (telencephalic nucleus) -AnnotationAssertion( "EHDAA2:0004566") -AnnotationAssertion( "EMAPA:32911") -AnnotationAssertion( "MA:0003203") -AnnotationAssertion(rdfs:label "gut mesentery") -SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +AnnotationAssertion(Annotation( "OBOL:automatic") "A nucleus of brain that is part of a telencephalon.") +AnnotationAssertion( "TAO:0002178") +AnnotationAssertion( "ZFA:0001660") +AnnotationAssertion(rdfs:label "telencephalic nucleus") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (embryonic cloacal lumen) @@ -60648,8 +71498,21 @@ SubClassOf( ObjectSomeValuesFrom( SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (early telencephalic vesicle) + +AnnotationAssertion( "EFO:0003562") +AnnotationAssertion( "EHDAA2:0001981") +AnnotationAssertion( "EHDAA:1993") +AnnotationAssertion( "EHDAA:2671") +AnnotationAssertion( "EMAPA:16914") +AnnotationAssertion(rdfs:label "early telencephalic vesicle") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (dorsal pancreas) +AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001371") AnnotationAssertion(rdfs:label "dorsal pancreas") SubClassOf( ) @@ -60661,6 +71524,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (ventral pancreas) +AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001393") AnnotationAssertion(rdfs:label "ventral pancreas") SubClassOf( ) @@ -60734,6 +71598,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (pancreas mesenchyme) AnnotationAssertion(Annotation( "MP:0011265") "The embryonic connective tissue made up of loosely aggregated mesenchymal cells, supported by interlaminar jelly, that gives rise to the developing pancreas.") +AnnotationAssertion( ) AnnotationAssertion( "EFO:0002557") AnnotationAssertion( "EMAPA:26220") AnnotationAssertion(rdfs:label "pancreas mesenchyme") @@ -60766,6 +71631,19 @@ SubClassOf( ObjectSomeValuesFrom( SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (upper rhombic lip) + +AnnotationAssertion(Annotation( "ZFIN:curator") "Anterior-most region of dorsal hindbrain within rhombomere 1, adjacent the midbrain-hindbrain boundary.") +AnnotationAssertion( "DHBA:10665") +AnnotationAssertion( "EHDAA2:0000229") +AnnotationAssertion( "TAO:0001442") +AnnotationAssertion( "ZFA:0001442") +AnnotationAssertion(rdfs:label "upper rhombic lip") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (glandular acinus) AnnotationAssertion(Annotation( "Wikipedia:Acinus") "The many-lobed berry cluster of cells that is the terminous of a gland where the secretion is produced is acinar in form.") @@ -60831,6 +71709,19 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (anal column) + +AnnotationAssertion(Annotation( "Wikipedia:Anal_columns") "One of a number of vertical folds, produced by an infolding of the mucous membrane and some of the muscular tissue in the upper half of the lumen of the anal canal[WP].") +AnnotationAssertion( "FMA:15713") +AnnotationAssertion( "NCIT:C32067") +AnnotationAssertion( "SCTID:245444007") +AnnotationAssertion( "Wikipedia:Anal_columns") +AnnotationAssertion(rdfs:label "anal column") +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (secondary heart field) AnnotationAssertion(Annotation( "GO:0003139") Annotation( "GOC:mtg_heart") Annotation( "GOC:rl") "A specific region of the lateral mesoderm that will form the majority of the mesodermal component of the right ventricle, arterial pole (outflow tract) and venous pole (inflow tract).") @@ -60843,7 +71734,7 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (facial mesenchyme) @@ -60921,6 +71812,9 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (multicellular anatomical structure) AnnotationAssertion(Annotation( "CARO:0010000") "An anatomical structure that has more than one cell as a part.") +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "CARO:0010000") AnnotationAssertion(rdfs:label "multicellular anatomical structure") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) @@ -60949,6 +71843,17 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (anterior part of tongue) + +AnnotationAssertion(Annotation( "Wikipedia:Anterior_tongue") "The portion of the tongue in front of the terminal sulcus. At the apex, thin and narrow, it is directed forward against the lingual surfaces of the lower incisor teeth. It is derived primarily from the first pharyngeal arch.") +AnnotationAssertion( "FMA:229084") +AnnotationAssertion( "NCIT:C32130") +AnnotationAssertion( "Wikipedia:Anterior_tongue") +AnnotationAssertion(rdfs:label "anterior part of tongue") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (food storage organ) AnnotationAssertion(Annotation( "https://orcid.org/0000-0002-6601-2165") "An organ of the digestive tract that is capable of retaining and storing food.") @@ -61005,6 +71910,49 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (mucosa of dorsum of tongue) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A mucosa that is part of a dorsum of tongue.") +AnnotationAssertion( "FMA:74871") +AnnotationAssertion( "SCTID:245835003") +AnnotationAssertion(rdfs:label "mucosa of dorsum of tongue") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (future tongue) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A compound organ that has the potential to develop into a tongue.") +AnnotationAssertion( "EHDAA2:0000696") +AnnotationAssertion( "EHDAA:2951") +AnnotationAssertion(rdfs:label "future tongue") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (open anatomical space) + +AnnotationAssertion(Annotation( "AEO:0000221") "An anatomical space with at least one opening to another space or the exterior.") +AnnotationAssertion( "AEO:0000221") +AnnotationAssertion( "EHDAA2:0004616") +AnnotationAssertion(rdfs:label "open anatomical space") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (sacral neural crest) + +AnnotationAssertion(Annotation( "XB:curator") Annotation( "http://www.ncbi.nlm.nih.gov/books/NBK10065/") "One of the 5 distinct and partially overlapping functional domains of the premigratory neural crest. The vagal and sacral neural crest cells develop into the ganglia of the enteric nervous system, also known as the parasympathetic ganglia.") +AnnotationAssertion( "XAO:0004192") +AnnotationAssertion(rdfs:label "sacral neural crest") +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (cuboidal epithelium) AnnotationAssertion(Annotation( "Wikipedia:Cuboidal_epithelium") "An epithelium consisting of cuboidal epithelial cells.") @@ -61050,6 +71998,19 @@ SubClassOf( ObjectSomeValuesFrom( SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (future hindbrain meninx) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A multi-tissue structure that has the potential to develop into a meninx of hindbrain.") +AnnotationAssertion( "EHDAA2:0000610") +AnnotationAssertion(rdfs:label "future hindbrain meninx") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (future metencephalon) AnnotationAssertion(Annotation( "OBOL:automatic") "A developing anatomical structure that has the potential to develop into a metencephalon.") @@ -61070,6 +72031,15 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (future facial nucleus) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A gray matter that has the potential to develop into a facial nucleus.") +AnnotationAssertion( "EHDAA2:0004639") +AnnotationAssertion(rdfs:label "future facial nucleus") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (future superior salivatory nucleus) AnnotationAssertion(Annotation( "OBOL:automatic") "A gray matter that has the potential to develop into a superior salivatory nucleus.") @@ -61147,7 +72117,7 @@ AnnotationAssertion( "aortic system") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (genital artery) @@ -61186,6 +72156,48 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (laryngeal apparatus) + +AnnotationAssertion(Annotation( "AAO:0000267") "Apparatus located between the lungs and the buccal cavity. This apparatus is composed of a pair of arytenoid cartilages that are supported by the cricoid ring.") +AnnotationAssertion( "AAO:0000267") +AnnotationAssertion( "EHDAA2:0000904") +AnnotationAssertion(rdfs:label "laryngeal apparatus") +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (laryngeal pre-cartilage condensation) + +AnnotationAssertion(rdfs:label "laryngeal pre-cartilage condensation") +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (laryngeal associated mesenchyme) + +AnnotationAssertion( "EHDAA2:0004085") +AnnotationAssertion(rdfs:comment "Many sources say: thyroid cartilage from arch 4 other laryngeal cartilage (cricoid/arytenoid) from 6?") +AnnotationAssertion(rdfs:label "laryngeal associated mesenchyme") +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (thalamic complex) + +AnnotationAssertion(Annotation( "Wikipedia:Thalamus#Thalamic_nuclei") "A nuclear complex which in mammals consists of four parts, the hypothalamus, epithalamus, ventral thalamus, and dorsal thalamus[WP,modified].") +AnnotationAssertion( "EHDAA2:0004469") +AnnotationAssertion( "FMA:258745") +AnnotationAssertion(rdfs:label "thalamic complex") +SubClassOf( ) +SubClassOf( ) + # Class: (future cardiac atrium) AnnotationAssertion(Annotation( "ZFA:0001718") "Multi-tissue structure that is part of the heart tube and will become the cardiac atrium.") @@ -61245,6 +72257,33 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (2nd arch mesenchyme from neural crest) + +AnnotationAssertion(Annotation( "OBOL:automatic") "Mesenchyme that develops_from a neural crest and is part of a 2nd arch mesenchyme.") +AnnotationAssertion( "EHDAA2:0000068") +AnnotationAssertion( "EMAPA:16281") +AnnotationAssertion(rdfs:label "2nd arch mesenchyme from neural crest") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (3rd arch mesenchyme from neural crest) + +AnnotationAssertion(Annotation( "OBOL:automatic") "Mesenchyme that develops_from a neural crest and is part of a 3rd arch mesenchyme.") +AnnotationAssertion( "EHDAA2:0000083") +AnnotationAssertion( "EMAPA:16404") +AnnotationAssertion( "VHOG:0000571") +AnnotationAssertion(rdfs:label "3rd arch mesenchyme from neural crest") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (4th arch mesenchyme from neural crest) AnnotationAssertion(Annotation( "OBOL:automatic") "Mesenchyme that develops_from a neural crest and is part of a 4th arch mesenchyme.") @@ -61428,7 +72467,7 @@ AnnotationAssertion( "cranial skeletal system") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (paired limb/fin bud mesenchyme) @@ -61520,11 +72559,32 @@ AnnotationAssertion(Annotation( "EMAPA:16130") AnnotationAssertion(rdfs:label "1st arch mesenchyme from head mesenchyme") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (2nd arch mesenchyme from head mesenchyme) + +AnnotationAssertion(Annotation( "OBOL:automatic") "Mesenchyme that develops_from a head mesenchyme from mesoderm and is part of a 2nd arch mesenchyme.") +AnnotationAssertion( "EHDAA2:0000067") +AnnotationAssertion( "EMAPA:16280") +AnnotationAssertion(rdfs:label "2nd arch mesenchyme from head mesenchyme") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (3rd arch mesenchyme from head mesenchyme) + +AnnotationAssertion(Annotation( "OBOL:automatic") "Mesenchyme that develops_from a head mesenchyme from mesoderm and is part of a 3rd arch mesenchyme.") +AnnotationAssertion( "EHDAA2:0000082") +AnnotationAssertion( "EMAPA:16403") +AnnotationAssertion(rdfs:label "3rd arch mesenchyme from head mesenchyme") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (4th arch mesenchyme from head mesenchyme) AnnotationAssertion(Annotation( "OBOL:automatic") "Mesenchyme that develops_from a head mesenchyme from mesoderm and is part of a 4th arch mesenchyme.") @@ -61533,7 +72593,6 @@ AnnotationAssertion( "4th arch mesenchyme from head mesenchyme") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -61543,7 +72602,6 @@ AnnotationAssertion(Annotation( "EHDAA2:0004078") AnnotationAssertion(rdfs:label "6th arch mesenchyme from head mesenchyme") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) -SubClassOf( ) SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -61578,7 +72636,7 @@ AnnotationAssertion( "XAO:0004026") AnnotationAssertion(rdfs:label "endoskeleton") SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (endochondral element) @@ -61598,7 +72656,7 @@ AnnotationAssertion( "This ontology covers metazoa, so we do not use exoskeleton as primary label, as in VSAO") AnnotationAssertion(rdfs:label "dermal skeleton") SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (pulmonary lobule) @@ -61614,6 +72672,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (secondary pulmonary lobule) AnnotationAssertion(Annotation( "PMID:3259815") "A unit of lung supplied by three to five terminal bronchioles and contained by fibrous septa.") +AnnotationAssertion( ) AnnotationAssertion( "FMA:7414") AnnotationAssertion(rdfs:label "secondary pulmonary lobule") SubClassOf( ) @@ -61678,6 +72737,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (spleen trabecular artery) AnnotationAssertion(Annotation( "MP:0002354") Annotation( "Wikipedia:Trabecular_arteries") "One of the branches of the splenic artery[MP].") +AnnotationAssertion( ) AnnotationAssertion( "MA:0000759") AnnotationAssertion( "NCIT:C49775") AnnotationAssertion( "Wikipedia:Trabecular_arteries") @@ -61692,6 +72752,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (spleen trabecular vein) AnnotationAssertion(Annotation( "MP:0002228") Annotation( "Wikipedia:Trabecular_veins") "One of the veins that feed the splenic vein.") +AnnotationAssertion( ) AnnotationAssertion( "MA:0000760") AnnotationAssertion( "NCIT:C49779") AnnotationAssertion( "Wikipedia:Trabecular_veins") @@ -61702,6 +72763,29 @@ SubClassOf( ObjectSomeValuesFrom( SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (epidermis suprabasal layer) + +AnnotationAssertion(Annotation( "MP:0001233") Annotation( "PMID:10469309") Annotation( "http://orcid.org/0000-0002-6601-2165") "Any layer of the epidermis that is superior to the stratum basale.") +AnnotationAssertion( "EMAPA:35315") +AnnotationAssertion( "MA:0000808") +AnnotationAssertion(rdfs:label "epidermis suprabasal layer") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (brain marginal zone) + +AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") "The part of the future brain that is derived from the mantle layer of the neural tube.") +AnnotationAssertion( "DHBA:10508") +AnnotationAssertion( "EMAPA:32680") +AnnotationAssertion( "MA:0000812") +AnnotationAssertion(rdfs:label "brain marginal zone") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (ocular surface region) AnnotationAssertion(Annotation( "MP:0013754") "The integrated unit (of the eye) that consists of the conjunctiva, the corneal surface, and the ocular mucosal adnexa including the lid margins and the meibomian gland openings, the lacrimal glands and the lacrimal drainage system, all which are critical to maintain ocular surface integrity and provide protection from external antigens and pathogenic microorganisms.") @@ -61713,6 +72797,16 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (internal naris) + +AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") "A naris that is located inside the nasal cavity and connects to the pharynx.") +AnnotationAssertion( "NCIT:C32856") +AnnotationAssertion(rdfs:label "internal naris") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (ciliary processes) AnnotationAssertion(Annotation( "Wikipedia:Ciliary_processes") "The ciliary processes are formed by the inward folding of the various layers of the choroid, i.e. , the choroid proper and the lamina basalis, and are received between corresponding foldings of the suspensory ligament of the lens.") @@ -61802,7 +72896,7 @@ AnnotationAssertion(rdfs:label " SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (pectoral complex) @@ -61852,6 +72946,23 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (meningeal cluster) + +AnnotationAssertion(Annotation( "https://orcid.org/0000-0002-6601-2165") "The collection of all meningeal layers that line a central nervous system.") +AnnotationAssertion( "EHDAA2:0004661") +AnnotationAssertion( "FMA:231572") +AnnotationAssertion( "NCIT:C12349") +AnnotationAssertion( "SCTID:362879001") +AnnotationAssertion( "UMLS:C0228116") +AnnotationAssertion( "Wikipedia:Meninges") +AnnotationAssertion( "neuronames:1465") +AnnotationAssertion(rdfs:label "meningeal cluster") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (pectoral complex muscle) AnnotationAssertion(Annotation( "https://orcid.org/0000-0002-6601-2165") "A muscle of a pectoral girdle, pectoral fin or anterior limb.") @@ -61864,6 +72975,15 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (median external naris) + +AnnotationAssertion(Annotation( "OBOL:automatic") "Am unpaired external naris that lies in the midline of the head.") +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "median external naris") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (subdivision of skeleton) AnnotationAssertion(Annotation( "UBERONREF:0000003") Annotation( "https://orcid.org/0000-0002-6601-2165") "Anatomical cluster consisting of the skeletal elements (i.e. bone elements, cartilage elements, cartilage condensations) that are part of an individual subdivision of the organism. Excludes joints.") @@ -61928,7 +73048,6 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) # Class: (vertebra pre-cartilage condensation) @@ -61938,7 +73057,7 @@ AnnotationAssertion( "vertebra pre-cartilage condensation") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (synovial joint of pectoral girdle) @@ -61953,6 +73072,16 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (laryngeal joint) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A skeletal joint that connects a laryngeal cartilage.") +AnnotationAssertion( "FMA:55100") +AnnotationAssertion(rdfs:label "laryngeal joint") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (nonsynovial joint) AnnotationAssertion(Annotation( "FMA:7491") "Joint in which the articulating bones or cartilages are connected by ligaments or fibrocartilage without an intervening synovial cavity. Examples: sagittal suture, inferior tibiofibular syndesmosis, costochondral joint, pubic symphysis.") @@ -62049,6 +73178,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (lamina propria of large intestine) AnnotationAssertion(Annotation( "OBOL:automatic") "A lamina propria that is part of a large intestine.") +AnnotationAssertion( ) AnnotationAssertion( "FMA:15654") AnnotationAssertion( "NCIT:C49298") AnnotationAssertion(rdfs:label "lamina propria of large intestine") @@ -62090,6 +73220,10 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (organ system subdivision) AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") "A subdivision of an anatomical system.") +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "FMA:67509") AnnotationAssertion( "SCTID:91690000") AnnotationAssertion(rdfs:label "organ system subdivision") @@ -62166,6 +73300,30 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (white matter of telencephalon) + +AnnotationAssertion(Annotation( "https://orcid.org/0000-0002-6601-2165") "A partion of white matter that is part of a telencephalon. This can be further subdivided in some species, for example, into hemisphere white matter and the corpus callosum.") +AnnotationAssertion( "BIRNLEX:1075") +AnnotationAssertion( "FMA:83930") +AnnotationAssertion( "HBA:9219") +AnnotationAssertion( "HBA:9230") +AnnotationAssertion( "TAO:0000597") +AnnotationAssertion( "ZFA:0000597") +AnnotationAssertion(rdfs:label "white matter of telencephalon") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (gray matter of telencephalon) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A portion of gray matter that is part of a telencephalon.") +AnnotationAssertion( "BIRNLEX:1067") +AnnotationAssertion( "FMA:83911") +AnnotationAssertion(rdfs:label "gray matter of telencephalon") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (cranial blood vasculature) AnnotationAssertion(Annotation( "OBOL:automatic") "A blood vasculature that is part of a head.") @@ -62237,7 +73395,7 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (future lower lip) @@ -62307,6 +73465,30 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (left recurrent laryngeal nerve) + +AnnotationAssertion( "EMAPA:25350") +AnnotationAssertion( "FMA:14469") +AnnotationAssertion( "MA:0001107") +AnnotationAssertion( "SCTID:280300006") +AnnotationAssertion(rdfs:label "left recurrent laryngeal nerve") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (right recurrent laryngeal nerve) + +AnnotationAssertion( "EMAPA:17275") +AnnotationAssertion( "FMA:14468") +AnnotationAssertion( "MA:0001108") +AnnotationAssertion( "SCTID:280299003") +AnnotationAssertion(rdfs:label "right recurrent laryngeal nerve") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (lower jaw opening) AnnotationAssertion(Annotation( "OBOL:automatic") "An anatomical space that is part of a bone of lower jaw.") @@ -62327,6 +73509,17 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (vagus nerve nucleus) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A cranial nerve nucleus that is associated with a vagus nerve.") +AnnotationAssertion( "FMA:54573") +AnnotationAssertion( "SCTID:362467005") +AnnotationAssertion(rdfs:label "vagus nerve nucleus") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (nucleus of spinal cord) AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") "A neural nucleus that is part of the spinal cord.") @@ -62353,6 +73546,7 @@ SubClassOf( (atrioventricular region) AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") "An anatomical junction that divides and overlaps with and atrium and a ventricle in the heart.") +AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0004149") AnnotationAssertion( "FMA:85125") AnnotationAssertion(rdfs:label "atrioventricular region") @@ -62524,6 +73718,41 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (preganglionic autonomic fiber) + +AnnotationAssertion(Annotation( "MESH:A08.663.542.122") Annotation( "Wikipedia:Preganglionic_nerve_fibers") "Nerve fibers which project from the central nervous system to autonomic ganglia. In the sympathetic division most preganglionic fibers originate with neurons in the intermediolateral column of the spinal cord, exit via ventral roots from upper thoracic through lower lumbar segments, and project to the paravertebral ganglia; there they either terminate in synapses or continue through the splanchnic nerves to the prevertebral ganglia. In the parasympathetic division the fibers originate in neurons of the brain stem and sacral spinal cord. In both divisions the principal transmitter is acetylcholine but peptide cotransmitters may also be released.") +AnnotationAssertion( ) +AnnotationAssertion( "FMA:5923") +AnnotationAssertion( "MESH:D001339") +AnnotationAssertion( "NCIT:C12624") +AnnotationAssertion( "Wikipedia:Preganglionic_nerve_fibers") +AnnotationAssertion(rdfs:label "preganglionic autonomic fiber") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (preganglionic sympathetic fiber) + +AnnotationAssertion(Annotation( "MP:0008310") "A cholinergic axonal fiber projecting from the CNS to a sympathetic ganglion.") +AnnotationAssertion( "SCTID:323517007") +AnnotationAssertion(rdfs:label "preganglionic sympathetic fiber") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (preganglionic parasympathetic fiber) + +AnnotationAssertion(Annotation( "MP:0008311") "A cholinergic axonal fibers projecting from the CNS to a parasympathetic ganglion.") +AnnotationAssertion( "Wikipedia:Preganglionic_fibers") +AnnotationAssertion(rdfs:label "preganglionic parasympathetic fiber") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (stomach glandular region) AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") "A region of the stomach that is lined with glandular epithelium.") @@ -62539,6 +73768,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (left hepatic vein) AnnotationAssertion(Annotation( "OBOL:automatic") "A hepatic vein that is part of a left lobe of liver.") +AnnotationAssertion( ) AnnotationAssertion( "FMA:14339") AnnotationAssertion( "MA:0003032") AnnotationAssertion( "SCTID:55188000") @@ -62550,6 +73780,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (right hepatic vein) AnnotationAssertion(Annotation( "OBOL:automatic") "A hepatic vein that is part of a right lobe of liver.") +AnnotationAssertion( ) AnnotationAssertion( "FMA:14338") AnnotationAssertion( "MA:0003034") AnnotationAssertion( "SCTID:18135006") @@ -62563,9 +73794,10 @@ SubClassOf( ObjectSomeValuesFrom( AnnotationAssertion(Annotation( "UBERON:cjm") Annotation( "Wikipedia:Body_cavity") Annotation( "Wikipedia:Coelom") "The aggregate of the coelemic cavity lumen plus the membranes that line the lumen.") AnnotationAssertion( "EHDAA2:0004731") AnnotationAssertion( "Wikipedia:Coelom") +AnnotationAssertion( "ZFA:0001438") AnnotationAssertion(rdfs:label "coelom") SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (myocoele) @@ -62614,6 +73846,26 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (lumen of secondary bronchus) + +AnnotationAssertion(Annotation( "OBOL:automatic") "An anatomical cavity that is part of a lobar bronchus.") +AnnotationAssertion( "FMA:62520") +AnnotationAssertion(rdfs:label "lumen of secondary bronchus") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (lumen of tertiary bronchus) + +AnnotationAssertion(Annotation( "OBOL:automatic") "An anatomical cavity that is part of a segmental bronchus.") +AnnotationAssertion( "FMA:62593") +AnnotationAssertion(rdfs:label "lumen of tertiary bronchus") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (stomach primordium) AnnotationAssertion(Annotation( "OBOL:automatic") "A primordium that has the potential to develop into a stomach.") @@ -62625,6 +73877,17 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (acoustico-facial VII-VIII ganglion complex) + +AnnotationAssertion( "EHDAA2:0000494") +AnnotationAssertion( "EMAPA:16794") +AnnotationAssertion( "SCTID:361514006") +AnnotationAssertion(rdfs:label "acoustico-facial VII-VIII ganglion complex") +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (head or neck skin) AnnotationAssertion(Annotation( "OBOL:automatic") "A zone of skin that is part of a craniocervical region.") @@ -62671,6 +73934,22 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ) +# Class: (gland of nasal mucosa) + +AnnotationAssertion(Annotation( "Wikipedia:Nasal_glands") "The nasal glands are the seromucous glands in the respiratory region of the nasal mucous membrane. The three major types of nasal glands are anterior serous glands, seromucous glands, and Bowman glands.") +AnnotationAssertion( "FMA:321518") +AnnotationAssertion( "NCIT:C22725") +AnnotationAssertion( "SCTID:368881007") +AnnotationAssertion( "Wikipedia:Nasal_glands") +AnnotationAssertion(rdfs:label "gland of nasal mucosa") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (embryonic facial prominence) AnnotationAssertion(Annotation( "http://www.indiana.edu/~anat550/hnanim/face/face.html") "One of five swellings formed during the development of the face.") @@ -62679,7 +73958,7 @@ AnnotationAssertion( "embryonic facial prominence") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (cervical artery) @@ -62693,6 +73972,7 @@ SubClassOf( (deep cervical artery) AnnotationAssertion(Annotation( "Wikipedia:Deep_cervical_artery") "The deep cervical artery (Profunda cervicalis) is an artery of the neck.") +AnnotationAssertion( ) AnnotationAssertion( "FMA:10659") AnnotationAssertion( "SCTID:244223002") AnnotationAssertion( "Wikipedia:Deep_cervical_artery") @@ -62705,6 +73985,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (transverse cervical artery) AnnotationAssertion(Annotation( "Wikipedia:Transverse_cervical_artery") "The transverse cervical artery (transverse artery of neck, transversa colli artery) is a branch of the thyrocervical trunk, running at a higher level than the suprascapular artery.") +AnnotationAssertion( ) AnnotationAssertion( "FMA:10664") AnnotationAssertion( "MA:0001936") AnnotationAssertion( "SCTID:244224008") @@ -62712,6 +73993,16 @@ AnnotationAssertion( "transverse cervical artery") SubClassOf( ) +# Class: (keratinized stratified squamous epithelium) + +AnnotationAssertion(Annotation( "FMA:45568") Annotation( "Wikipedia:Stratified_squamous_epithelium#Keratinized") "Keratinized stratified squamous epithelium is a stratified squamous epithelium, the cells of which synthesize and accumulate keratin.") +AnnotationAssertion( "FMA:45568") +AnnotationAssertion( "Wikipedia:Stratified_squamous_epithelium#Keratinized") +AnnotationAssertion(rdfs:label "keratinized stratified squamous epithelium") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (bone of jaw) AnnotationAssertion(Annotation( "OBOL:automatic") "A bone element that is part of a jaw region.") @@ -62743,6 +74034,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (subserosa) AnnotationAssertion(Annotation( "Wikipedia:Subserosa") "A layer of tissue between the muscularis and serosa.") +AnnotationAssertion( ) AnnotationAssertion( "FMA:45636") AnnotationAssertion( "NCIT:C94494") AnnotationAssertion( "SCTID:2255006") @@ -62751,12 +74043,13 @@ AnnotationAssertion(rdfs:comment AnnotationAssertion(rdfs:label "subserosa") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) # Class: (respiratory system arterial smooth muscle) +AnnotationAssertion( ) AnnotationAssertion( "MA:0001802") AnnotationAssertion(rdfs:label "respiratory system arterial smooth muscle") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) @@ -62767,6 +74060,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (respiratory system venous smooth muscle) AnnotationAssertion(Annotation( "OBOL:automatic") "A smooth muscle tissue that is part of a respiratory system venous blood vessel.") +AnnotationAssertion( ) AnnotationAssertion( "MA:0001812") AnnotationAssertion(rdfs:label "respiratory system venous smooth muscle") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) @@ -62970,6 +74264,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (muscle layer of colon) AnnotationAssertion(Annotation( "OBOL:automatic") "A muscular coat that is part of a colon.") +AnnotationAssertion( ) AnnotationAssertion( "EMAPA:27383") AnnotationAssertion( "FMA:14986") AnnotationAssertion( "MA:0003198") @@ -63061,6 +74356,46 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (hindbrain vesicle) + +AnnotationAssertion( "EHDAA2:0000101") +AnnotationAssertion( "SCTID:361482003") +AnnotationAssertion(rdfs:comment "gives rise of 4th ventricle") +AnnotationAssertion(rdfs:label "hindbrain vesicle") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (future brain vesicle) + +AnnotationAssertion( "NCIT:C34259") +AnnotationAssertion( "SCTID:360409004") +AnnotationAssertion( "neuronames:2499") +AnnotationAssertion(rdfs:label "future brain vesicle") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (choroidal artery) + +AnnotationAssertion(Annotation( "ncithesaurus:Choroidal_Artery") "One of two arteries (anterior and posterior choroidal artery) that supply blood to the choroid plexus, optic tract, hippocampus, globus pallidus, and other various brain regions.") +AnnotationAssertion( "NCIT:C32310") +AnnotationAssertion( "SCTID:244210009") +AnnotationAssertion(rdfs:label "choroidal artery") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (1st arch mandibular endoderm) + +AnnotationAssertion( "EHDAA2:0000033") +AnnotationAssertion( "EMAPA:16384") +AnnotationAssertion(rdfs:label "1st arch mandibular endoderm") +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (foregut-midgut junction gland) AnnotationAssertion(Annotation( "OBOL:automatic") "A gland that is part of a foregut-midgut junction.") @@ -63071,9 +74406,36 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (left lateral ventricle) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A telencephalic ventricle that is in_the_left_side_of a telencephalon.") +AnnotationAssertion( "FMA:78450") +AnnotationAssertion( "SCTID:368593005") +AnnotationAssertion(rdfs:label "left lateral ventricle") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (right lateral ventricle) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A telencephalic ventricle that is in_the_right_side_of a telencephalon.") +AnnotationAssertion( "FMA:78449") +AnnotationAssertion( "SCTID:368571000") +AnnotationAssertion(rdfs:label "right lateral ventricle") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (anal sac gland secretion) AnnotationAssertion(Annotation( "OBOL:automatic") "A bodily secretion that is produced by a gland of anal sac.") +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion(rdfs:label "anal sac gland secretion") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) @@ -63216,6 +74578,19 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (otocyst lumen) + +AnnotationAssertion(Annotation( "OBOL:automatic") "An anatomical cavity that is part of a ear vesicle.") +AnnotationAssertion( "EHDAA2:0004121") +AnnotationAssertion( "EMAPA:25363") +AnnotationAssertion(rdfs:label "otocyst lumen") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (epithelium of intestinal villus) AnnotationAssertion(Annotation( "OBOL:automatic") "An epithelium that is part of a intestinal villus.") @@ -63240,6 +74615,9 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (anatomical conduit space) AnnotationAssertion(Annotation( "FMA:9338") Annotation( "http://orcid.org/0000-0002-6601-2165") "An anatomical space which is the lumen of some anatomical conduit and connects two or more spaces together[FMA,modified].") +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "FMA:9338") AnnotationAssertion(rdfs:label "anatomical conduit space") SubClassOf( ) @@ -63292,7 +74670,7 @@ SubClassOf( ObjectSomeValuesFrom( AnnotationAssertion(Annotation( "https://orcid.org/0000-0002-6601-2165") "A principle subdivision of an organism that includes all structures along the primary axis, typically the anterior-posterior axis, from head to tail, including structures of the body proper where present (for example, ribs), but excluding appendages.") AnnotationAssertion(rdfs:label "main body axis") SubClassOf( ) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (body proper) @@ -63381,6 +74759,21 @@ AnnotationAssertion(rdfs:comment AnnotationAssertion(rdfs:label "great vessel of heart") SubClassOf( ) +# Class: (future telencephalon) + +AnnotationAssertion(Annotation( "ZFA:0000571") Annotation( "ZFA:curator") "Embryonic structure that gives rise to the telencephalon.") +AnnotationAssertion( "EHDAA2:0004424") +AnnotationAssertion( "EMAPA:36024") +AnnotationAssertion( "TAO:0000571") +AnnotationAssertion( "ZFA:0000571") +AnnotationAssertion(rdfs:comment "paired anteriolateral division of the embryonic prosencephalon plus the lamina terminalis from which the olfactory lobes, cerebral cortex, and subcortical nuclei are derived[MP]") +AnnotationAssertion(rdfs:label "future telencephalon") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (mesenchyme derived from neural crest) AnnotationAssertion(Annotation( "OBOL:automatic") Annotation( "https://github.com/obophenotype/uberon/issues/248") "Mesenchyme that develops_from the neural crest[Automatically generated definition].") @@ -63391,6 +74784,14 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ) +# Class: (gustatory papilla of tongue) + +AnnotationAssertion(Annotation( "MGI:smb") Annotation( "MP:0006256") "A papilla that contain taste buds, including the fungiform, foliate, and circumvallate papillae.") +AnnotationAssertion(rdfs:label "gustatory papilla of tongue") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (respiratory muscle) AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") "Muscle that is part of the respiratory system.") @@ -63438,6 +74839,34 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (tongue taste bud) + +AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") "A taste bud that is located on the tongue, situated on a gustatory papilla.") +AnnotationAssertion(rdfs:label "tongue taste bud") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (gustatory epithelium of tongue) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A gustatory epithelium that is part of a tongue.") +AnnotationAssertion( "BIRNLEX:4099") +AnnotationAssertion(rdfs:label "gustatory epithelium of tongue") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) + +# Class: (gustatory epithelium of palate) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A gustatory epithelium that is part of a roof of mouth.") +AnnotationAssertion(rdfs:label "gustatory epithelium of palate") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (visceral abdominal adipose tissue) AnnotationAssertion(Annotation( "CALOHA:paula") Annotation( "MGI:csmith") Annotation( "http://orcid.org/0000-0002-6601-2165") Annotation( "https://github.com/obophenotype/uberon/issues/259") "Subcutaneous adipose tissue that is located in the peritoneal cavity.") @@ -63458,9 +74887,17 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ) +# Class: (subarachnoid fissure) + +AnnotationAssertion( "FMA:75136") +AnnotationAssertion(rdfs:label "subarachnoid fissure") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (thoracic skeleton) AnnotationAssertion(Annotation( "Wikipedia:Rib_cage") Annotation( "https://orcid.org/0000-0002-6601-2165") "Subdivision of skeletal system that consists of all skeletal elements in the thoracic region of the trunk. In most vertebrates this is the rib cage and sternum.") +AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0002013") AnnotationAssertion( "FMA:77169") AnnotationAssertion( "Wikipedia:Thoracic_skeleton") @@ -63469,9 +74906,46 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (white matter lamina of neuraxis) + +AnnotationAssertion( "FMA:83856") +AnnotationAssertion(rdfs:label "white matter lamina of neuraxis") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (white matter lamina of diencephalon) + +AnnotationAssertion( "FMA:62449") +AnnotationAssertion(rdfs:label "white matter lamina of diencephalon") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (white matter lamina of cerebral hemisphere) + +AnnotationAssertion( "FMA:67951") +AnnotationAssertion(rdfs:label "white matter lamina of cerebral hemisphere") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (white matter lamina of cerebellum) + +AnnotationAssertion(Annotation( "http://neurolex.org/wiki/Category:White_laminae_of_cerebellum") "The white laminae of cerebellum is subdivision of the cerebellar cortex comprised of myelinated axons lying deep to the granule cell layer of the cerebellar cortex.") +AnnotationAssertion( "BIRNLEX:1105") +AnnotationAssertion( "SCTID:362413004") +AnnotationAssertion(rdfs:label "white matter lamina of cerebellum") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (thoracic spinal cord ventral horn) AnnotationAssertion(Annotation( "OBOL:automatic") "A ventral horn of spinal cord that is part of a thoracic spinal cord.") +AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1410") AnnotationAssertion( "SCTID:367876000") AnnotationAssertion(rdfs:label "thoracic spinal cord ventral horn") @@ -63482,6 +74956,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (cervical spinal cord gray matter) AnnotationAssertion(Annotation( "OBOL:automatic") "A gray matter of spinal cord that is part of a cervical spinal cord.") +AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1521") AnnotationAssertion( "SCTID:362438009") AnnotationAssertion(rdfs:label "cervical spinal cord gray matter") @@ -63489,9 +74964,21 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (cervical spinal cord white matter) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A white matter of spinal cord that is part of a cervical spinal cord.") +AnnotationAssertion( ) +AnnotationAssertion( "BIRNLEX:1531") +AnnotationAssertion( "SCTID:174829001") +AnnotationAssertion(rdfs:label "cervical spinal cord white matter") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (cervical spinal cord ventral horn) AnnotationAssertion(Annotation( "OBOL:automatic") "A ventral horn of spinal cord that is part of a cervical spinal cord.") +AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:1680") AnnotationAssertion( "SCTID:174363005") AnnotationAssertion(rdfs:label "cervical spinal cord ventral horn") @@ -63502,6 +74989,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (thoracic spinal cord gray matter) AnnotationAssertion(Annotation( "OBOL:automatic") "A gray matter of spinal cord that is part of a thoracic spinal cord.") +AnnotationAssertion( ) AnnotationAssertion( "BIRNLEX:980") AnnotationAssertion( "SCTID:362441000") AnnotationAssertion(rdfs:label "thoracic spinal cord gray matter") @@ -63509,6 +74997,31 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (thoracic spinal cord white matter) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A white matter of spinal cord that is part of a thoracic spinal cord.") +AnnotationAssertion( ) +AnnotationAssertion( "BIRNLEX:999") +AnnotationAssertion( "SCTID:367881009") +AnnotationAssertion(rdfs:label "thoracic spinal cord white matter") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (white matter of medulla oblongata) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A white matter that is part of a medulla oblongata.") +AnnotationAssertion( "BAMS:mw") +AnnotationAssertion( "BIRNLEX:1024") +AnnotationAssertion( "BIRNLEX:1414") +AnnotationAssertion( "FMA:83944") +AnnotationAssertion( "neuronames:778") +AnnotationAssertion(rdfs:label "white matter of medulla oblongata") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (frontonasal process epithelium) AnnotationAssertion(Annotation( "OBOL:automatic") "An epithelium that is part of a frontonasal prominence.") @@ -63544,9 +75057,24 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (median lingual swelling epithelium) + +AnnotationAssertion(Annotation( "OBOL:automatic") "An epithelium that is part of a median lingual swelling.") +AnnotationAssertion( "EHDAA2:0001085") +AnnotationAssertion( "EMAPA:17188") +AnnotationAssertion(rdfs:label "median lingual swelling epithelium") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (interlobular duct) AnnotationAssertion(Annotation( "ncithesaurus:Interlobular_Duct") "A duct that is located between lobules, within the thin connective tissue septa that separate lobules. All interlobular ducts are excretory.") +AnnotationAssertion( ) AnnotationAssertion( "NCIT:C32828") AnnotationAssertion( "UMLS:C1512857") AnnotationAssertion( "Wikipedia:Interlobular_ducts") @@ -63569,6 +75097,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (intralobular duct) AnnotationAssertion(Annotation( "http://www.siumed.edu/~dking2/intro/glands.htm") "A duct that is located within a lobule, with no more connective tissue intervening between ducts and secretory units (i.e., acini or tubules) than between adjacent secretory units. Intercalated and striated ducts are intralobular.") +AnnotationAssertion( ) AnnotationAssertion( "SCTID:205214009") AnnotationAssertion(rdfs:label "intralobular duct") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) @@ -63584,6 +75113,15 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (prosomere) + +AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") "A neuromere that is part of the presumptive forebrain.") +AnnotationAssertion( "FMA:61996") +AnnotationAssertion(rdfs:label "prosomere") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (midbrain neuromere) AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") "A neuromere that is part of the presumptive midbrain.") @@ -63613,6 +75151,18 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (lingual septum) + +AnnotationAssertion(Annotation( "Wikipedia:Lingual_septum") "The lingual septum consists of a vertical layer of fibrous tissue, extending throughout the entire length of the median plane of the tongue, though not quite reaching the dorsum. It is thicker behind than in front, and occasionally contains a small fibrocartilage, about 6 mm. in length. It is well displayed by making a vertical section across the organ.") +AnnotationAssertion( "EMAPA:18274") +AnnotationAssertion( "FMA:54813") +AnnotationAssertion( "SCTID:368727001") +AnnotationAssertion( "Wikipedia:Lingual_septum") +AnnotationAssertion(rdfs:label "lingual septum") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (musculature of pectoral complex) AnnotationAssertion(Annotation( "OBOL:automatic") "Any collection of muscles that is part of a pectoral complex. The pectoral complex comprises the pectoral girdle and the associated limb or fin.") @@ -63630,9 +75180,22 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (brainstem white matter) + +AnnotationAssertion(Annotation( "OBOL:automatic") "White matter that is part of a brainstem [Automatically generated definition].") +AnnotationAssertion( "EMAPA:35189") +AnnotationAssertion( "FMA:282112") +AnnotationAssertion( "MA:0002741") +AnnotationAssertion( "SCTID:360442003") +AnnotationAssertion(rdfs:label "brainstem white matter") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (skeletal muscle organ, vertebrate) AnnotationAssertion(Annotation( "GOC:dos") "A muscle organ that consists of skeletal muscle tissue ensheathed in epimysium, that develops from myotome and that is innervated by some somatic motor neuron. Skeletal muscles are typically attached (via a tendon) to a bone but there are exceptions (e.g. intrinsic tongue muscles).") +AnnotationAssertion( ) AnnotationAssertion( "AAO:0011099") AnnotationAssertion( "BTO:0001103") AnnotationAssertion( "CALOHA:TS-0933") @@ -63657,7 +75220,7 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) @@ -63685,6 +75248,39 @@ AnnotationAssertion(rdfs:label " SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (perivascular space) + +AnnotationAssertion(Annotation( "DOI:10.1007/s11064-015-1581-6") Annotation( "ncithesaurus:Perivascular_Space") "The space between a blood vessel and the pia mater.") +AnnotationAssertion( "NCIT:C83196") +AnnotationAssertion( "SCTID:342298001") +AnnotationAssertion( "UMLS:C0225983") +AnnotationAssertion( "Wikipedia:Virchow-Robin_space") +AnnotationAssertion(rdfs:comment "VRS belonging to the subarachnoid space are continuous with VRS of the subpial space. The direct communication between VRS of the subarachnoid space and the subpial space is unique to the brain's arteries, as no leptomeningeal layers surround the brain's veins[WP]") +AnnotationAssertion(rdfs:label "perivascular space") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (cerebral cortex marginal layer) + +AnnotationAssertion(Annotation( "MP:0000792") Annotation( "http://orcid.org/0000-0002-6601-2165") "Developing superficial cortical layer located just under the pia matter, develops from the marginal layer of the neural tube and becomes cortical layer I.") +AnnotationAssertion( "EMAPA:17546") +AnnotationAssertion( "EMAPA:32713") +AnnotationAssertion( "PBA:294021774") +AnnotationAssertion(rdfs:label "cerebral cortex marginal layer") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (layer of developing cerebral cortex) + +AnnotationAssertion(rdfs:label "layer of developing cerebral cortex") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (cervical vertebra endochondral element) AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") "A vertebral endochondral element in the cervical region of the vertebral column.") @@ -63796,7 +75392,7 @@ AnnotationAssertion(rdfs:label " EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) # Class: (circulatory organ) @@ -63837,14 +75433,26 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (heart plus pericardium) +AnnotationAssertion( ) AnnotationAssertion( "MA:0002449") AnnotationAssertion(rdfs:label "heart plus pericardium") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (nose skin) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A zone of skin that is part of a external nose.") +AnnotationAssertion( "FMA:24763") +AnnotationAssertion( "MA:0003090") +AnnotationAssertion(rdfs:label "nose skin") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (proper hepatic artery) AnnotationAssertion(Annotation( "Wikipedia:Hepatic_artery_proper") "The hepatic artery proper (also proper hepatic artery), arises from the common hepatic artery and runs alongside the portal vein and the common bile duct to form the portal triad. The hepatic artery proper gives off a small supraduodenal artery to the duodenal bulb. Then the right gastric artery comes off and runs to the left along the lesser curvature of the stomach to meet the left gastric artery, which is a branch of the celiac trunk. It subsequently gives off the cystic artery, which feeds the gallbladder, before bifurcating into the right and left hepatic arteries. Of note, the right and left hepatic arteries may demonstrate variant anatomy. A replaced right hepatic artery may arise from the superior mesenteric artery (SMA) and a replaced left hepatic artery may arise from the left gastric artery.") +AnnotationAssertion( ) AnnotationAssertion( "FMA:14772") AnnotationAssertion( "MA:0003095") AnnotationAssertion( "SCTID:244262006") @@ -63856,6 +75464,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (left hepatic artery) AnnotationAssertion(Annotation( "OBOL:automatic") "A hepatic artery that is part of a left lobe of liver.") +AnnotationAssertion( ) AnnotationAssertion( "FMA:14779") AnnotationAssertion( "MA:0003096") AnnotationAssertion(rdfs:label "left hepatic artery") @@ -63868,6 +75477,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (right hepatic artery) AnnotationAssertion(Annotation( "OBOL:automatic") "A hepatic artery that is part of a right lobe of liver.") +AnnotationAssertion( ) AnnotationAssertion( "FMA:14778") AnnotationAssertion( "MA:0003097") AnnotationAssertion(rdfs:label "right hepatic artery") @@ -63890,6 +75500,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (anal canal epithelium) AnnotationAssertion(Annotation( "OBOL:automatic") "An epithelium that is part of a anal canal.") +AnnotationAssertion( ) AnnotationAssertion( "EMAPA:18835") AnnotationAssertion( "FMA:17511") AnnotationAssertion(rdfs:label "anal canal epithelium") @@ -63913,6 +75524,55 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (upper respiratory conduit) + +AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") "Any anatomical conduit which is part of the upper respiratory tract.") +AnnotationAssertion( "FMA:265132") +AnnotationAssertion(rdfs:label "upper respiratory conduit") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (olfactory apparatus chamber) + +AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") "An anatomical chamber that is part of the olfactory apparatus, consisting of cavity walls (nasal epithelium and mucosal layers) and the space bounded anteriorly by the nares and posteriorly by the choanae, when these structures are present.") +AnnotationAssertion( "FMA:265136") +AnnotationAssertion(rdfs:label "olfactory apparatus chamber") +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (cranial or facial muscle) + +AnnotationAssertion( "EMAPA:25133") +AnnotationAssertion( "MA:0000579") +AnnotationAssertion(rdfs:label "cranial or facial muscle") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (left lung lobar bronchus epithelium) + +AnnotationAssertion(Annotation( "OBOL:automatic") "An epithelium that is part of a lobar bronchus of left lung.") +AnnotationAssertion( "EMAPA:17658") +AnnotationAssertion( "MA:0003135") +AnnotationAssertion(rdfs:label "left lung lobar bronchus epithelium") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (right lung lobar bronchus epitheium) + +AnnotationAssertion(Annotation( "OBOL:automatic") "An epithelium that is part of a lobar bronchus of right lung.") +AnnotationAssertion( "EMAPA:17666") +AnnotationAssertion( "MA:0003136") +AnnotationAssertion(rdfs:label "right lung lobar bronchus epitheium") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (liver blood vessel) AnnotationAssertion(Annotation( "OBOL:automatic") "A blood vessel that is part of a liver.") @@ -63924,6 +75584,16 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (ear epithelium) + +AnnotationAssertion(Annotation( "OBOL:automatic") "An epithelium that is part of a ear.") +AnnotationAssertion( "EMAPA:32800") +AnnotationAssertion( "MA:0003161") +AnnotationAssertion(rdfs:label "ear epithelium") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (eye epithelium) AnnotationAssertion(Annotation( "OBOL:automatic") "An epithelium that is part of a camera-type eye.") @@ -63948,6 +75618,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (duodenum lamina propria) AnnotationAssertion(Annotation( "OBOL:automatic") "A lamina propria that is part of a duodenum.") +AnnotationAssertion( ) AnnotationAssertion( "EMAPA:27255") AnnotationAssertion( "FMA:15972") AnnotationAssertion( "MA:0003209") @@ -63959,6 +75630,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (pulmonary capillary) AnnotationAssertion(Annotation( "OBOL:automatic") "A capillary that is part of a lung.") +AnnotationAssertion( ) AnnotationAssertion( "FMA:14121") AnnotationAssertion(rdfs:label "pulmonary capillary") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) @@ -63978,6 +75650,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (liver stroma) AnnotationAssertion(Annotation( "OBOL:automatic") "A stroma that is part of a liver.") +AnnotationAssertion( ) AnnotationAssertion( "FMA:17553") AnnotationAssertion(rdfs:label "liver stroma") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) @@ -64051,6 +75724,123 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (frontal lobe) + +AnnotationAssertion(Annotation( "FMA:61824") "Frontal lobe is the anterior-most of five lobes of the cerebral hemisphere. It is bounded by the central sulcus on its posterior border and by the longitudinal cerebral fissure on its medial border.") +AnnotationAssertion( ) +AnnotationAssertion( "BAMS:Frontal_lobe") +AnnotationAssertion( "BIRNLEX:928") +AnnotationAssertion( "BM:Tel-Cx-FR") +AnnotationAssertion( "CALOHA:TS-0389") +AnnotationAssertion( "DHBA:12113") +AnnotationAssertion( "EFO:0000913") +AnnotationAssertion( "EV:0100167") +AnnotationAssertion( "FMA:61824") +AnnotationAssertion( "HBA:4009") +AnnotationAssertion( "MAT:0000505") +AnnotationAssertion( "MESH:D005625") +AnnotationAssertion( "NCIT:C12352") +AnnotationAssertion( "SCTID:180920004") +AnnotationAssertion(rdfs:label "frontal lobe") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (lobe of cerebral hemisphere) + +AnnotationAssertion(Annotation( "FMA:61823") "Subdivision of telencephalon which is one of a number of subdivisions of each hemisphere separated by both real landmarks (sulci and fissures) and arbitrary boundaries[FMA,modified].") +AnnotationAssertion( "BIRNLEX:922") +AnnotationAssertion( "BTO:0000445") +AnnotationAssertion( "FMA:61823") +AnnotationAssertion( "SCTID:272632001") +AnnotationAssertion( "neuronames:1210") +AnnotationAssertion(rdfs:comment "We use the term lobe broadly as a rough regional area, encompassing homologous regions in smooth-brained mammals. We subdivide the lobes into white matter and neocortical parts.") +AnnotationAssertion(rdfs:label "lobe of cerebral hemisphere") +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (white matter of cerebral lobe) + +AnnotationAssertion( "FMA:256176") +AnnotationAssertion(rdfs:label "white matter of cerebral lobe") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (white matter of frontal lobe) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A white matter of cerebral lobe that is part of a frontal lobe.") +AnnotationAssertion( "FMA:256178") +AnnotationAssertion( "SCTID:362331002") +AnnotationAssertion(rdfs:label "white matter of frontal lobe") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (cortex of cerebral lobe) + +AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") "Grey matter neocortex region of a lobe of the cerebral hemisphere.") +AnnotationAssertion( "FMA:242197") +AnnotationAssertion(rdfs:label "cortex of cerebral lobe") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (parietal cortex) + +AnnotationAssertion(Annotation( "NLX:79282") "Gray matter of the parietal region of the neocortex, located in the parietal lobe of gyrencephalic animals. It is continuous anteriorly with the frontal cortex, posteriorly with the occipital cortex and medially with the insular cortex and with the temporal cortex on the posterior/inferior border.") +AnnotationAssertion( "DHBA:10208") +AnnotationAssertion( "DMBA:16016") +AnnotationAssertion( "EMAPA:35667") +AnnotationAssertion( "FMA:242203") +AnnotationAssertion( "MA:0000916") +AnnotationAssertion( "NLX:79282") +AnnotationAssertion( "SCTID:369217001") +AnnotationAssertion( "neuronames:2473") +AnnotationAssertion(rdfs:label "parietal cortex") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (white matter of parietal lobe) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A white matter of cerebral lobe that is part of a parietal lobe.") +AnnotationAssertion( "FMA:256184") +AnnotationAssertion( "SCTID:369200008") +AnnotationAssertion(rdfs:label "white matter of parietal lobe") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (white matter of temporal lobe) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A white matter of cerebral lobe that is part of a temporal lobe.") +AnnotationAssertion( "FMA:256186") +AnnotationAssertion( "SCTID:362344007") +AnnotationAssertion(rdfs:label "white matter of temporal lobe") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (temporal cortex) + +AnnotationAssertion(Annotation( "NLX:94939") "Gray matter of the temporal region of the neocortex, located in the temporal lobe in gyrencephalic animals.") +AnnotationAssertion( "BM:Tel-Cx-Te") +AnnotationAssertion( "DHBA:10235") +AnnotationAssertion( "DMBA:16044") +AnnotationAssertion( "FMA:242201") +AnnotationAssertion( "MA:0000941") +AnnotationAssertion( "NLX:94939") +AnnotationAssertion( "SCTID:362343001") +AnnotationAssertion(rdfs:label "temporal cortex") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (pharyngeal ectoderm) AnnotationAssertion(Annotation( "PMID:23020903") Annotation( "http://orcid.org/0000-0002-6601-2165") "The external part of the developing pharynx that is made of ectoderm. During vertebrate development, pockets form in pharyngeal ectoderm between the pharyngeal arches.") @@ -64072,6 +75862,15 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (central nervous system white matter layer) + +AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") "A layer of of the central nervous system that is composed of white matter.") +AnnotationAssertion( "FMA:83898") +AnnotationAssertion(rdfs:label "central nervous system white matter layer") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (spinal cord column) AnnotationAssertion(rdfs:label "spinal cord column") @@ -64096,6 +75895,26 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (white matter of midbrain) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A white matter that is part of the midbrain.") +AnnotationAssertion( ) +AnnotationAssertion( "DHBA:10650") +AnnotationAssertion( "FMA:83936") +AnnotationAssertion( "HBA:265505382") +AnnotationAssertion(rdfs:label "white matter of midbrain") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (cerebral blood vessel) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A blood vessel that is part of a cerebellum.") +AnnotationAssertion(rdfs:label "cerebral blood vessel") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (pit) AnnotationAssertion(Annotation( "AEO:0000204") Annotation( "AEO:JB") "An roughly circular indentation in a surface.") @@ -64255,12 +76074,12 @@ AnnotationAssertion( "skin of upper lip") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) -SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) # Class: (stroma of pancreas) AnnotationAssertion(Annotation( "OBOL:automatic") "A stroma that is part of a pancreas.") +AnnotationAssertion( ) AnnotationAssertion( "FMA:63121") AnnotationAssertion(rdfs:label "stroma of pancreas") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) @@ -64277,8 +76096,19 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (meningeal vein) + +AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") "One of the veins draining a meninix.") +AnnotationAssertion( "FMA:50839") +AnnotationAssertion( "SCTID:84842006") +AnnotationAssertion(rdfs:label "meningeal vein") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (skeletal musculature) +AnnotationAssertion( ) AnnotationAssertion( "EHDAA2:0001842") AnnotationAssertion( "EMAPA:35578") AnnotationAssertion(rdfs:label "skeletal musculature") @@ -64314,6 +76144,26 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (foramen for glossopharyngeal nerve) + +AnnotationAssertion(Annotation( "PHENOSCAPE:alex") "Foramen that allows the passge of the glossopharyngeal nerve (cranial nerve IX).") +AnnotationAssertion(rdfs:label "foramen for glossopharyngeal nerve") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (facial nerve canal) + +AnnotationAssertion(Annotation( "Wikipedia:Facial_canal") "A Z-shaped canal running through the temporal bone from the internal acoustic meatus to the stylomastoid foramen. It is located within the middle ear region, according to its shape it is divided into three main segments: the labyrinthine, the tympanic, and the mastoidal segment .") +AnnotationAssertion( "FMA:54952") +AnnotationAssertion( "Wikipedia:Facial_canal") +AnnotationAssertion(rdfs:label "facial nerve canal") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (ethmoid foramen) AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") "An bone foramen in the ethmoid bone.") @@ -64432,6 +76282,16 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (tongue papilla epithelium) + +AnnotationAssertion( "EMAPA:35869") +AnnotationAssertion( "MA:0003178") +AnnotationAssertion(rdfs:label "tongue papilla epithelium") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (chorioretinal region) AnnotationAssertion(Annotation( "UBERON:drseb") Annotation( "http://orcid.org/0000-0002-6601-2165") "The part of the eye that consists of both the retina and the optic choroid.") @@ -64444,8 +76304,40 @@ SubClassOf( ObjectSomeValuesFrom( SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (white matter of hindbrain) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A white matter that is part of the hindbrain.") +AnnotationAssertion( ) +AnnotationAssertion( "DHBA:10668") +AnnotationAssertion( "FMA:268636") +AnnotationAssertion(rdfs:label "white matter of hindbrain") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (white matter of forebrain) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A white matter that is part of the forebrain.") +AnnotationAssertion( ) +AnnotationAssertion( "DHBA:10557") +AnnotationAssertion( "FMA:268634") +AnnotationAssertion(rdfs:label "white matter of forebrain") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (white matter of myelencephalon) + +AnnotationAssertion(Annotation( "OBOL:automatic") "A white matter that is part of the myelencephalon.") +AnnotationAssertion( "HBA:9298") +AnnotationAssertion(rdfs:label "white matter of myelencephalon") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (gray matter of hindbrain) +AnnotationAssertion( ) AnnotationAssertion( "DHBA:10654") AnnotationAssertion( "FMA:268630") AnnotationAssertion(rdfs:label "gray matter of hindbrain") @@ -64453,8 +76345,19 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (gray matter of forebrain) + +AnnotationAssertion( ) +AnnotationAssertion( "DHBA:10157") +AnnotationAssertion( "FMA:268608") +AnnotationAssertion(rdfs:label "gray matter of forebrain") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (gray matter of midbrain) +AnnotationAssertion( ) AnnotationAssertion( "DHBA:10649") AnnotationAssertion( "FMA:83913") AnnotationAssertion(rdfs:label "gray matter of midbrain") @@ -64462,6 +76365,42 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (gray matter of diencephalon) + +AnnotationAssertion( "FMA:83912") +AnnotationAssertion(rdfs:label "gray matter of diencephalon") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (white matter of metencephalon) + +AnnotationAssertion( "FMA:83939") +AnnotationAssertion( "HBA:9287") +AnnotationAssertion(rdfs:label "white matter of metencephalon") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (white matter of pons) + +AnnotationAssertion( "FMA:83940") +AnnotationAssertion(rdfs:label "white matter of pons") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (white matter of pontine tegmentum) + +AnnotationAssertion( "BIRNLEX:1069") +AnnotationAssertion( "FMA:83942") +AnnotationAssertion( "HBA:265505486") +AnnotationAssertion(rdfs:label "white matter of pontine tegmentum") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (sensory organ epithelium) AnnotationAssertion( "EMAPA:35952") @@ -64471,6 +76410,26 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (nose epithelium) + +AnnotationAssertion( "EMAPA:35958") +AnnotationAssertion( "MA:0003171") +AnnotationAssertion(rdfs:label "nose epithelium") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (epithelium of external nose) + +AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") "Epithelial layer that is part of the external part of the nose.") +AnnotationAssertion( "FMA:63143") +AnnotationAssertion(rdfs:label "epithelium of external nose") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (exocrine gland of integumental system) AnnotationAssertion(Annotation( "GOC:dos") Annotation( "http://orcid.org/0000-0002-6601-2165") "An exocrine gland that is part of a integumental system.") @@ -64479,6 +76438,35 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ) +# Class: (accessory XI nerve nucleus) + +AnnotationAssertion(Annotation( "Wikipedia:Spinal_accessory_nucleus") "The spinal accessory nucleus lies within the cervical spinal cord (C1-C5) in the ventral horn. The nucleus ambiguus is classically said to provide the 'cranial component' of the accessory nerve. However, the very existence of this cranial component has been recently questioned and seen as contributing exclusively to the vagus nerve. The terminology continues to be used in describing both human anatomy, and that of other animals.") +AnnotationAssertion( "FMA:83965") +AnnotationAssertion( "MA:0001033") +AnnotationAssertion( "Wikipedia:Spinal_accessory_nucleus") +AnnotationAssertion( "neuronames:2003") +AnnotationAssertion(rdfs:comment "See also: Wikipedia:Spinal_accessory_nucleus") +AnnotationAssertion(rdfs:label "accessory XI nerve nucleus") +SubClassOf( ) +SubClassOf( ) + +# Class: (auricular blood vessel) + +AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") "A blood vessel that supplies or drains an ear.") +AnnotationAssertion( "MA:0001226") +AnnotationAssertion(rdfs:label "auricular blood vessel") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (cerebral nerve fasciculus) + +AnnotationAssertion( "FMA:260712") +AnnotationAssertion(rdfs:label "cerebral nerve fasciculus") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (surface of eyeball) AnnotationAssertion( "FMA:58315") @@ -64549,6 +76537,15 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (white matter of the cerebellar cortex) + +AnnotationAssertion(Annotation( "NLXANAT:20081249") "White matter that lies deep to the granular cell layer of the cerebellar cortex. It contains afferents to the cerebellar cortex and axons that run between the cerebellar cortex and the deep cerebellar nuclei.") +AnnotationAssertion( "NLXANAT:20081249") +AnnotationAssertion(rdfs:label "white matter of the cerebellar cortex") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (developing neuroepithelium) AnnotationAssertion(Annotation( "AEO:0001008") Annotation( "AEO:JB") "An embryonic or larval epithelium that is committed to form part of the nervous system.") @@ -64575,6 +76572,16 @@ AnnotationAssertion(rdfs:label " SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (cerebellum marginal layer) + +AnnotationAssertion( "DHBA:12695") +AnnotationAssertion( "EHDAA2:0001152") +AnnotationAssertion( "EMAPA:17789") +AnnotationAssertion(rdfs:label "cerebellum marginal layer") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (hindbrain marginal layer) AnnotationAssertion( "DHBA:12694") @@ -64595,19 +76602,95 @@ SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (cortical preplate) + +AnnotationAssertion(Annotation( "PMID:12626695") "The layer of the developing cerebral cortex that is formed from the first cohort of neurons to migrate out of the cortical ventricular zone; split by the second wave into marginal zone and subplate.") +AnnotationAssertion( "EMAPA:35261") +AnnotationAssertion(rdfs:label "cortical preplate") +SubClassOf( ) + # Class: (cranial neuron projection bundle) AnnotationAssertion(Annotation( "ISBN:0471888893") Annotation( "http://orcid.org/0000-0002-6601-2165") "Any of the cranial nerves, or their central nervous system analogs (the optic tract, the epiphyseal tract). These analogs are not true nerves, and are instead evaginated sensory afferents emanating from the brain.") +AnnotationAssertion( ) AnnotationAssertion(rdfs:label "cranial neuron projection bundle") SubClassOf( ) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) -SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (integumental taste bud) + +AnnotationAssertion(Annotation( "PMID:11921337") Annotation( "http://orcid.org/0000-0002-6601-2165") "A taste bud that is located external to the digestive tube, on the head or body, as found in species such as goldfish.") +AnnotationAssertion(rdfs:label "integumental taste bud") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (lip taste bud) + +AnnotationAssertion(Annotation( "PMID:11921337") Annotation( "http://orcid.org/0000-0002-6601-2165") "A taste bud that is located on a lip.") +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "lip taste bud") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (head taste bud) + +AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") "A taste bud that is located on the skin of the head.") +AnnotationAssertion(rdfs:label "head taste bud") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (pharyngeal taste bud) + +AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") "A taste bud that is located in the pharynx.") +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "pharyngeal taste bud") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (mouth roof taste bud) + +AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") "A taste bud that is located on the roof of the mouth.") +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "mouth roof taste bud") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (esophageal taste bud) + +AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") "A taste bud that is located in the esophagus.") +AnnotationAssertion( ) +AnnotationAssertion(rdfs:label "esophageal taste bud") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (trunk taste bud) + +AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") "A taste bud that is located on the skin of the trunk.") +AnnotationAssertion(rdfs:label "trunk taste bud") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (autonomic nerve) AnnotationAssertion(Annotation( "Wikipedia:Autonomic_nerve") "The autonomic nerve is a small nerve which carries postganglionic sympathetic and parasympathetic neurons from the zygomaticotemporal nerve; a branch of the maxillary nerve, to the lacrimal nerve; a branch of the ophthalmic nerve. These neurons derive from the superior cervical ganglion and the pterygopalatine ganglion respectively. They will travel to the lacrimal gland via the lacrimal nerve. Parasympathetic will induce lacrimation and vice versa.") +AnnotationAssertion( ) AnnotationAssertion( "FMA:5866") AnnotationAssertion( "MESH:D017776") AnnotationAssertion( "SCTID:276145003") @@ -64620,6 +76703,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (sympathetic nerve) +AnnotationAssertion( ) AnnotationAssertion( "SCTID:181098007") AnnotationAssertion(rdfs:label "sympathetic nerve") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) @@ -64682,6 +76766,9 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (multi organ part structure) AnnotationAssertion(Annotation( "CARO:0020001") "An multicellular anatomical structure that has subparts of multiple organs as a part.") +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "CARO:0020001") AnnotationAssertion(rdfs:label "multi organ part structure") SubClassOf( ) @@ -64690,6 +76777,9 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (cell cluster) AnnotationAssertion(Annotation( "CARO:0020002") "A cluster of cells, largely surrounded by a morphological boundary.") +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "CARO:0020002") AnnotationAssertion( "FMA:62807") AnnotationAssertion(rdfs:label "cell cluster") @@ -64699,6 +76789,9 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (disconnected anatomical group) AnnotationAssertion(Annotation( "CARO:0020000") "Material anatomical entity consisting of multiple anatomical structures that are not connected to each other.") +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "CARO:0020000") AnnotationAssertion(rdfs:label "disconnected anatomical group") SubClassOf( ) @@ -64709,6 +76802,9 @@ SubClassOf( ObjectMinCardinality( # Class: (anatomical collection) AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") "A collection of anatomical structures that are alike in terms of their morphology or developmental origin.") +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion(rdfs:label "anatomical collection") SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) @@ -64782,6 +76878,15 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (hindbrain cortical intermediate zone) + +AnnotationAssertion( "DHBA:12682") +AnnotationAssertion( "EMAPA:32917") +AnnotationAssertion(rdfs:label "hindbrain cortical intermediate zone") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (jaw mesenchyme) AnnotationAssertion(Annotation( "OBOL:automatic") "Mesenchyme that is part of a developing jaw [Automatically generated definition].") @@ -64792,6 +76897,16 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (naris epithelium) + +AnnotationAssertion(Annotation( "OBOL:automatic") "An epithelium that is part of a naris [Automatically generated definition].") +AnnotationAssertion( "EMAPA:35959") +AnnotationAssertion( "MA:0003172") +AnnotationAssertion(rdfs:label "naris epithelium") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (jaw epithelium) AnnotationAssertion( "EMAPA:32904") @@ -64834,6 +76949,43 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (right ear) + +AnnotationAssertion(Annotation( "ncithesaurus:Right_Ear") "The organ of hearing located on the right side of the head.") +AnnotationAssertion( "FMA:53641") +AnnotationAssertion( "NCIT:C81285") +AnnotationAssertion( "SCTID:368570004") +AnnotationAssertion( "UMLS:C0229298") +AnnotationAssertion(rdfs:label "right ear") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (branch of internal carotid artery) + +AnnotationAssertion( "FMA:70506") +AnnotationAssertion( "NCIT:C32837") +AnnotationAssertion( "SCTID:360629008") +AnnotationAssertion( "UMLS:C1182571") +AnnotationAssertion(rdfs:label "branch of internal carotid artery") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (left ear) + +AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") Annotation( "ncithesaurus:Left_Ear") "The organ of hearing located on the left side of the head[ncit,modified].") +AnnotationAssertion( "FMA:53642") +AnnotationAssertion( "NCIT:C81259") +AnnotationAssertion( "SCTID:368592000") +AnnotationAssertion( "UMLS:C0229299") +AnnotationAssertion(rdfs:label "left ear") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (branch of external carotid artery) AnnotationAssertion( "FMA:70505") @@ -64848,6 +77000,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (esophageal artery) AnnotationAssertion(Annotation( "ncithesaurus:Esophageal_Artery") "Any of several arteries that arise from the aorta and supply blood to the esophagus.") +AnnotationAssertion( ) AnnotationAssertion( "FMA:4149") AnnotationAssertion( "NCIT:C32535") AnnotationAssertion( "SCTID:56548006") @@ -64880,6 +77033,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (vasculature of integument) AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") "The part of the circulatory system that lies within the subcutaneous tissue layers close to the surface of the skin.") +AnnotationAssertion( ) AnnotationAssertion( "FMA:225275") AnnotationAssertion(rdfs:label "vasculature of integument") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) @@ -64955,6 +77109,16 @@ AnnotationAssertion(rdfs:label " SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (laryngeal nerve) + +AnnotationAssertion(Annotation( "UBERON:cjm") "Any nerve that innervates the larynx.") +AnnotationAssertion( "MESH:D007823") +AnnotationAssertion( "SCTID:307013006") +AnnotationAssertion(rdfs:label "laryngeal nerve") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (cavity of cardiac chamber) AnnotationAssertion( "EHDAA2:0004181") @@ -65117,6 +77281,9 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (anatomical surface region) AnnotationAssertion(Annotation( "https://github.com/obophenotype/uberon/issues/1324") "Material anatomical entity that forms the outermost boundary of an anatomical structure.") +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion( "AAO:0010270") AnnotationAssertion( "ZFA:0005594") AnnotationAssertion(rdfs:label "anatomical surface region") @@ -65143,6 +77310,11 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (post-embryonic notochord) AnnotationAssertion(Annotation( "UBERON:cjm") "A notochord that has persisted beyond the embryonic stage.") +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) +AnnotationAssertion( ) AnnotationAssertion(rdfs:label "post-embryonic notochord") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) @@ -65312,6 +77484,32 @@ SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (wall of lateral ventricle) + +AnnotationAssertion( "FMA:242772") +AnnotationAssertion(rdfs:label "wall of lateral ventricle") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (wall of fourth ventricle) + +AnnotationAssertion( "FMA:242778") +AnnotationAssertion(rdfs:label "wall of fourth ventricle") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (wall of ventricular system of brain) + +AnnotationAssertion( "FMA:242841") +AnnotationAssertion(rdfs:label "wall of ventricular system of brain") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (wall of eyeball) AnnotationAssertion( "FMA:58098") @@ -65351,6 +77549,22 @@ SubClassOf( ObjectSomeValuesFrom( SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (subarachnoid space of brain) + +AnnotationAssertion( "FMA:322073") +AnnotationAssertion(rdfs:label "subarachnoid space of brain") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (subarachnoid space of spinal cord) + +AnnotationAssertion( "FMA:322074") +AnnotationAssertion(rdfs:label "subarachnoid space of spinal cord") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (cystic artery) AnnotationAssertion(Annotation( "http://orcid.org/0000-0002-6601-2165") Annotation( "https://en.wikipedia.org/wiki/Cystic_artery") "An artery that supplies oxygenated blood to the cystic duct.") @@ -65429,6 +77643,16 @@ EquivalentClasses( ObjectIntersec SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (future internal carotid artery) + +AnnotationAssertion( "EFO:0003612") +AnnotationAssertion( "TAO:0001053") +AnnotationAssertion( "ZFA:0001053") +AnnotationAssertion(rdfs:label "future internal carotid artery") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (axial vasculature) AnnotationAssertion( "ZFA:0001073") @@ -65615,6 +77839,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (bronchus submucosal gland) AnnotationAssertion(Annotation( "http://orcid.org/0000-0003-3440-1876") Annotation( "http://orcid.org/0000-0003-4183-8865") "A submucosal gland located in a bronchus.") +AnnotationAssertion( ) AnnotationAssertion(rdfs:label "bronchus submucosal gland") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) @@ -65631,6 +77856,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (anorectum) AnnotationAssertion(Annotation( "DOI:10.1007/978-3-319-26938-2_8") Annotation( "DOI:10.1148/rg.2015150037") Annotation( "PMID:29742860") Annotation( "http://orcid.org/0000-0002-6826-8770") Annotation( "http://orcid.org/0000-0003-3440-1876") "A subdivision of the digestive tract in humans that includes the rectum, the anal canal and the anus.") +AnnotationAssertion( ) AnnotationAssertion(rdfs:label "anorectum") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ))) SubClassOf( ) @@ -65681,6 +77907,34 @@ AnnotationAssertion(rdfs:label " SubClassOf( ) SubClassOf( ) +# Class: (cortical layer II/III) + +AnnotationAssertion(Annotation( "PMID:34616063") "A laminar subdivision of the neocortex that is comprised of a part of layer II and a part of layer III.") +AnnotationAssertion(Annotation( "PMID:29311847") rdfs:comment "In rodents, layer II/III refers to a mereological sum of layers II and III as there is no clear architectonic boundary between them.") +AnnotationAssertion(rdfs:label "cortical layer II/III") +SubClassOf( ) + +# Class: (cortical layer V/VI) + +AnnotationAssertion(Annotation( "PMID:34616063") "A laminar subdivision of the neocortex that is comprised of a part of layer V and a part of layer VI.") +AnnotationAssertion(rdfs:label "cortical layer V/VI") +SubClassOf( ) + +# Class: (cortical layer VIb) + +AnnotationAssertion(Annotation( "PMID:32160552") "The deepest layer of the neocortex. While layer 6b is considered part of layer 6, it is distinct morphologically, genetically, and developmentally from the rest of layer 6. Neurons in L6b project to cortical targets and higher-order thalamus and develop from a precursor population that arises from the subplate.") +AnnotationAssertion(rdfs:label "cortical layer VIb") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) +SubClassOf( ObjectSomeValuesFrom( )) + +# Class: (laminar subdivision of the cortex) + +AnnotationAssertion(Annotation( "ISBN-10:0-87893-742-0") "One or a subset of adjacent layers of the neocortex.") +AnnotationAssertion(rdfs:label "laminar subdivision of the cortex") +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (noradrenergic cell groups) AnnotationAssertion(Annotation( "WikipediaVersioned:Noradrenergic_cell_groups&oldid=965992184") "Collections of neurons in the central nervous system that have been demonstrated by histochemical fluorescence to contain the neurotransmitter norepinephrine (noradrenalin).") @@ -65691,11 +77945,20 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (excretory system) AnnotationAssertion(Annotation( "GO:0007588") "An anatomical system that eliminates waste products that arise as a result of metabolic activity.") +AnnotationAssertion( ) AnnotationAssertion(rdfs:label "excretory system") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (embryonic craniocervical region) + +AnnotationAssertion(Annotation( "https://orcid.org/0000-0002-6095-8718") "A craniocervical region that is part of an embryo.") +AnnotationAssertion(rdfs:label "embryonic craniocervical region") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + # Class: (capillary of brain) AnnotationAssertion(Annotation( "https://orcid.org/0000-0002-0819-0473") "A capillary that is part of the brain.") @@ -65756,6 +78019,7 @@ SubClassOf( (submucosal gland acinus) AnnotationAssertion(Annotation( "PMID:17394068") Annotation( "PMID:17707699") Annotation( "PMID:25648514") Annotation( "PMID:30864819") "A spherical or tubular structure in a submucosal gland that produces and secretes mucus and other substances into the ducts leading to the surface epithelium.") +AnnotationAssertion( ) AnnotationAssertion(rdfs:label "submucosal gland acinus") EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) SubClassOf( ) @@ -65764,6 +78028,7 @@ SubClassOf( ObjectSomeValuesFrom( # Class: (bronchopulmonary segment) AnnotationAssertion(Annotation( "FMA:7312") Annotation( "PMID:18271171") Annotation( "PMID:33620799") Annotation( "doi:10.1016/j.mpaic.2008.09.022") "A discrete anatomical unit of the lung that is composed of a segmental bronchus and the lung tissue supplied by that bronchus. A bronchopulmonary segment exhibits a pyramidal shape, with its apex pointing towards the center of the lung and its base toward the pleural surface.") +AnnotationAssertion( ) AnnotationAssertion(Annotation( "PMID:18271171") Annotation( "doi:10.1016/j.mpaic.2008.09.022") rdfs:comment "A bronchopulmonary segment is surrounded by connective tissue septa, which are continuous with the pleural surface and prevent air collateralization between segments somewhat. In humans, the right lung has ten bronchopulmonary segments and eight or nine bronchopulmonary segments in the left lung.") AnnotationAssertion(rdfs:label "bronchopulmonary segment") SubClassOf( ) @@ -65783,6 +78048,15 @@ SubClassOf( ObjectSomeValuesFrom( SubClassOf( ObjectSomeValuesFrom( )) SubClassOf( ObjectSomeValuesFrom( )) +# Class: (lumen of pulmonary alveolus) + +AnnotationAssertion(Annotation( "PMID:30390118") "An anatomical cavity that is part of the alveolus of the lung") +AnnotationAssertion( "FMA:62779") +AnnotationAssertion(rdfs:label "lumen of pulmonary alveolus") +EquivalentClasses( ObjectIntersectionOf( ObjectSomeValuesFrom( ))) +SubClassOf( ) +SubClassOf( ObjectSomeValuesFrom( )) + SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( )) ObjectSomeValuesFrom( )) SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( )) ObjectSomeValuesFrom( )) @@ -65824,6 +78098,7 @@ SubClassOf(ObjectIntersectionOf( SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( )) ObjectSomeValuesFrom( )) SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( )) ObjectSomeValuesFrom( )) SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( )) ObjectSomeValuesFrom( )) +SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( )) ObjectSomeValuesFrom( )) SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( )) ObjectSomeValuesFrom( )) SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( )) ObjectSomeValuesFrom( )) SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( )) ObjectSomeValuesFrom( )) @@ -65831,8 +78106,10 @@ SubClassOf(ObjectIntersectionOf( SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( )) ObjectSomeValuesFrom( )) SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( )) ObjectSomeValuesFrom( )) SubClassOf(ObjectIntersectionOf( ObjectSomeValuesFrom( )) ObjectSomeValuesFrom( )) +SubClassOf(ObjectIntersectionOf(ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )) ObjectSomeValuesFrom( )) DisjointClasses(ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )) DisjointClasses(ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )) +DisjointClasses(ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )) DisjointClasses(ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )) DisjointClasses(ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )) DisjointClasses(ObjectSomeValuesFrom( ) ObjectSomeValuesFrom( )) diff --git a/src/patterns/definitions.owl b/src/patterns/definitions.owl index 7e6d6c0..bbaed33 100644 --- a/src/patterns/definitions.owl +++ b/src/patterns/definitions.owl @@ -7,8 +7,8 @@ Prefix(rdfs:=) Ontology( - -Annotation(owl:versionInfo "2024-12-02") + +Annotation(owl:versionInfo "2024-12-12") Declaration(Class()) Declaration(Class()) From 38b84ae8273f8061d7868cbe460c17b62bddffa4 Mon Sep 17 00:00:00 2001 From: ugur Date: Thu, 12 Dec 2024 15:11:51 +0000 Subject: [PATCH 3/3] Update Clusters.tsv --- src/templates/cl_kg/Clusters.tsv | 344 +++++++++++++++++++++++++++++++ 1 file changed, 344 insertions(+) create mode 100644 src/templates/cl_kg/Clusters.tsv diff --git a/src/templates/cl_kg/Clusters.tsv b/src/templates/cl_kg/Clusters.tsv new file mode 100644 index 0000000..eb68e0d --- /dev/null +++ b/src/templates/cl_kg/Clusters.tsv @@ -0,0 +1,344 @@ +ID TYPE Cell_type Marker_set Comment Species +ID TYPE A skos:prefLabel AI CLM:0010000 A rdfs:comment AI RO:0002175 SPLIT=| +http://example.org/5834aad5-b359-57f0-ada6-43ff0f86d35e owl:NamedIndividual Astro CLM:1000062 A Astro in the Human Brain has the gene markers OBI1-AS1 with a NS-Forest FBeta value of 0.957043843s. NCBITaxon:9606 +http://example.org/2faf99ba-bb40-5d33-9fef-4f9ee2d3b8cf owl:NamedIndividual Astro CLM:1000062 A Astro in the Human Brain has the gene markers OBI1-AS1 with a NS-Forest FBeta value of 0.957043843s. NCBITaxon:9606 +http://example.org/3ad8742d-0658-520b-8caa-860b144f34dc owl:NamedIndividual Chandelier CLM:1000063 A Chandelier in the Human Brain has the gene markers GPR149, CA8 with a NS-Forest FBeta value of 0.799748111s. NCBITaxon:9606 +http://example.org/87c7a4ec-f900-5e45-90e0-20f36a4de3d0 owl:NamedIndividual Chandelier CLM:1000063 A Chandelier in the Human Brain has the gene markers GPR149, CA8 with a NS-Forest FBeta value of 0.799748111s. NCBITaxon:9606 +http://example.org/893130a9-4a8b-52ab-81f8-ca2393291bc3 owl:NamedIndividual Endo CLM:1000064 A Endo in the Human Brain has the gene markers FLT1, ABCG2 with a NS-Forest FBeta value of 0.923892465s. NCBITaxon:9606 +http://example.org/e2cc2c8e-db8e-5789-a248-c2a5483a8bb2 owl:NamedIndividual Endo CLM:1000064 A Endo in the Human Brain has the gene markers FLT1, ABCG2 with a NS-Forest FBeta value of 0.923892465s. NCBITaxon:9606 +http://example.org/02ba3608-520e-58c3-8296-7a30fb44b792 owl:NamedIndividual L2/3 IT CLM:1000065 A L2/3 IT in the Human Brain has the gene markers ONECUT2, COL5A2 with a NS-Forest FBeta value of 0.670149932s. NCBITaxon:9606 +http://example.org/db32bc1e-fdfe-549b-a613-ebd0592bd1a9 owl:NamedIndividual L2/3 IT CLM:1000065 A L2/3 IT in the Human Brain has the gene markers ONECUT2, COL5A2 with a NS-Forest FBeta value of 0.670149932s. NCBITaxon:9606 +http://example.org/66c30064-a0a6-5421-abc8-26185ca2130d owl:NamedIndividual L4 IT CLM:1000066 A L4 IT in the Human Brain has the gene markers RORB, ST8SIA4 with a NS-Forest FBeta value of 0.720108696s. NCBITaxon:9606 +http://example.org/2f3cac5b-3a24-566b-b3d6-a38d79280e86 owl:NamedIndividual L4 IT CLM:1000066 A L4 IT in the Human Brain has the gene markers RORB, ST8SIA4 with a NS-Forest FBeta value of 0.720108696s. NCBITaxon:9606 +http://example.org/0353b724-00ce-5af3-81d0-975e4b9125c0 owl:NamedIndividual L5 ET CLM:1000067 A L5 ET in the Human Brain has the gene markers CHST8, POU3F1 with a NS-Forest FBeta value of 0.815891473s. NCBITaxon:9606 +http://example.org/a03c0def-b059-59eb-8a2c-cee76ab191c9 owl:NamedIndividual L5 ET CLM:1000067 A L5 ET in the Human Brain has the gene markers CHST8, POU3F1 with a NS-Forest FBeta value of 0.815891473s. NCBITaxon:9606 +http://example.org/4f07ac00-784e-5208-84e7-dae2729e2a36 owl:NamedIndividual L5 IT CLM:1000068 A L5 IT in the Human Brain has the gene markers ARSJ, RORB, KCNK2 with a NS-Forest FBeta value of 0.764261336s. NCBITaxon:9606 +http://example.org/ae7bfb26-8398-53fd-b60a-9e9478620261 owl:NamedIndividual L5 IT CLM:1000068 A L5 IT in the Human Brain has the gene markers ARSJ, RORB, KCNK2 with a NS-Forest FBeta value of 0.764261336s. NCBITaxon:9606 +http://example.org/a41bb1bd-5fd3-5dbf-86f8-9c230501c6db owl:NamedIndividual L5/6 NP CLM:1000069 A L5/6 NP in the Human Brain has the gene markers NPSR1-AS1, TLL1 with a NS-Forest FBeta value of 0.899288218s. NCBITaxon:9606 +http://example.org/0ae7c362-4542-5693-9231-53884050359d owl:NamedIndividual L5/6 NP CLM:1000069 A L5/6 NP in the Human Brain has the gene markers NPSR1-AS1, TLL1 with a NS-Forest FBeta value of 0.899288218s. NCBITaxon:9606 +http://example.org/71862bd2-d5f1-5b8c-9813-a451e823b599 owl:NamedIndividual L6 CT CLM:1000070 A L6 CT in the Human Brain has the gene markers SEMA5B, ADAMTSL1, SULF1 with a NS-Forest FBeta value of 0.631898455s. NCBITaxon:9606 +http://example.org/e7098671-5ba6-54d3-87f1-b989a44f9b69 owl:NamedIndividual L6 CT CLM:1000070 A L6 CT in the Human Brain has the gene markers SEMA5B, ADAMTSL1, SULF1 with a NS-Forest FBeta value of 0.631898455s. NCBITaxon:9606 +http://example.org/ce6e61d7-e493-543b-8d78-4560237e7f21 owl:NamedIndividual L6 IT CLM:1000071 A L6 IT in the Human Brain has the gene markers LINC00507, THEMIS with a NS-Forest FBeta value of 0.641695703s. NCBITaxon:9606 +http://example.org/d5b9061d-2796-51e5-bcaa-87d5925ecaa1 owl:NamedIndividual L6 IT CLM:1000071 A L6 IT in the Human Brain has the gene markers LINC00507, THEMIS with a NS-Forest FBeta value of 0.641695703s. NCBITaxon:9606 +http://example.org/69c708db-8620-5031-a02e-11c8a733a3d9 owl:NamedIndividual L6 IT Car3 CLM:1000072 A L6 IT Car3 in the Human Brain has the gene markers SMYD1, THEMIS with a NS-Forest FBeta value of 0.877752028s. NCBITaxon:9606 +http://example.org/43b78d16-7d68-59a5-b2ec-9e64c0aab706 owl:NamedIndividual L6 IT Car3 CLM:1000072 A L6 IT Car3 in the Human Brain has the gene markers SMYD1, THEMIS with a NS-Forest FBeta value of 0.877752028s. NCBITaxon:9606 +http://example.org/e6389f82-51ed-56af-b851-de611ec1e0d3 owl:NamedIndividual L6b CLM:1000073 A L6b in the Human Brain has the gene markers CCN2, ROS1 with a NS-Forest FBeta value of 0.819940964s. NCBITaxon:9606 +http://example.org/b5a8c5d8-c5f9-5026-b716-d1975b3d83ea owl:NamedIndividual L6b CLM:1000073 A L6b in the Human Brain has the gene markers CCN2, ROS1 with a NS-Forest FBeta value of 0.819940964s. NCBITaxon:9606 +http://example.org/711e9ee0-085e-5c70-9ed1-64b294bd454f owl:NamedIndividual Lamp5 CLM:1000074 A Lamp5 in the Human Brain has the gene markers LINC00298, KIT with a NS-Forest FBeta value of 0.814687838s. NCBITaxon:9606 +http://example.org/cbee5de5-da3c-5ca4-b5bd-8bd32502b068 owl:NamedIndividual Lamp5 CLM:1000074 A Lamp5 in the Human Brain has the gene markers LINC00298, KIT with a NS-Forest FBeta value of 0.814687838s. NCBITaxon:9606 +http://example.org/90aafd0c-f327-58f2-8d2c-5564ffa8063c owl:NamedIndividual Lamp5 Lhx6 CLM:1000075 A Lamp5 Lhx6 in the Human Brain has the gene markers CHST9, LAMP5 with a NS-Forest FBeta value of 0.821678322s. NCBITaxon:9606 +http://example.org/7a04939b-d8a5-5aac-a085-3239e836c862 owl:NamedIndividual Lamp5 Lhx6 CLM:1000075 A Lamp5 Lhx6 in the Human Brain has the gene markers CHST9, LAMP5 with a NS-Forest FBeta value of 0.821678322s. NCBITaxon:9606 +http://example.org/7a4595fe-e4c4-5660-be4c-99a12504917b owl:NamedIndividual Micro/PVM CLM:1000076 A Micro/PVM in the Human Brain has the gene markers APBB1IP, DOCK8 with a NS-Forest FBeta value of 0.955105634s. NCBITaxon:9606 +http://example.org/ae11f4b1-564f-5b4c-9899-d04eca186ae3 owl:NamedIndividual Micro/PVM CLM:1000076 A Micro/PVM in the Human Brain has the gene markers APBB1IP, DOCK8 with a NS-Forest FBeta value of 0.955105634s. NCBITaxon:9606 +http://example.org/d915b34b-787f-5d3d-afa9-62adfd300f65 owl:NamedIndividual OPC CLM:1000077 A OPC in the Human Brain has the gene markers FERMT1 with a NS-Forest FBeta value of 0.741071429s. NCBITaxon:9606 +http://example.org/14d9754b-1eea-5a7c-97ff-de38f1b4edb5 owl:NamedIndividual OPC CLM:1000077 A OPC in the Human Brain has the gene markers FERMT1 with a NS-Forest FBeta value of 0.741071429s. NCBITaxon:9606 +http://example.org/06b2002f-99f5-5159-91ab-035f401426fe owl:NamedIndividual Oligo CLM:1000078 A Oligo in the Human Brain has the gene markers ST18, PLP1 with a NS-Forest FBeta value of 0.97185637s. NCBITaxon:9606 +http://example.org/2ca69824-405d-59c8-a937-48a7dd22677b owl:NamedIndividual Oligo CLM:1000078 A Oligo in the Human Brain has the gene markers ST18, PLP1 with a NS-Forest FBeta value of 0.97185637s. NCBITaxon:9606 +http://example.org/87809caf-8c18-5bb3-8b36-22c761abe966 owl:NamedIndividual Pax6 CLM:1000079 A Pax6 in the Human Brain has the gene markers RELN, HCRTR2 with a NS-Forest FBeta value of 0.724125093s. NCBITaxon:9606 +http://example.org/6f0e6c63-4188-5b12-88b2-a2fae74cee13 owl:NamedIndividual Pax6 CLM:1000079 A Pax6 in the Human Brain has the gene markers RELN, HCRTR2 with a NS-Forest FBeta value of 0.724125093s. NCBITaxon:9606 +http://example.org/9d569766-6d7b-5ffa-894a-e7f346d314bf owl:NamedIndividual Pvalb CLM:1000080 A Pvalb in the Human Brain has the gene markers PVALB, TAC1, MYO5B with a NS-Forest FBeta value of 0.691998764s. NCBITaxon:9606 +http://example.org/a13f04d8-6ca9-522e-8867-e83329e3cee8 owl:NamedIndividual Pvalb CLM:1000080 A Pvalb in the Human Brain has the gene markers PVALB, TAC1, MYO5B with a NS-Forest FBeta value of 0.691998764s. NCBITaxon:9606 +http://example.org/5abfad32-62f8-53bf-bad2-4bcafe571e93 owl:NamedIndividual Sncg CLM:1000081 A Sncg in the Human Brain has the gene markers RXRG, THSD7B with a NS-Forest FBeta value of 0.628943702s. NCBITaxon:9606 +http://example.org/6e98c20d-30b7-5a38-89a7-992a776c53ea owl:NamedIndividual Sncg CLM:1000081 A Sncg in the Human Brain has the gene markers RXRG, THSD7B with a NS-Forest FBeta value of 0.628943702s. NCBITaxon:9606 +http://example.org/34e6e2f1-7987-57d7-bdae-531413a20b43 owl:NamedIndividual Sst CLM:1000082 A Sst in the Human Brain has the gene markers SST, PLCH1 with a NS-Forest FBeta value of 0.842367005s. NCBITaxon:9606 +http://example.org/5ea4fcf6-f505-5700-ae53-ff241ccdbcf9 owl:NamedIndividual Sst CLM:1000082 A Sst in the Human Brain has the gene markers SST, PLCH1 with a NS-Forest FBeta value of 0.842367005s. NCBITaxon:9606 +http://example.org/6335c542-c4f5-501b-ab63-39ec43434a16 owl:NamedIndividual Sst Chodl CLM:1000083 A Sst Chodl in the Human Brain has the gene markers NPY with a NS-Forest FBeta value of 0.894026187s. NCBITaxon:9606 +http://example.org/40203770-4c13-5fcf-be4a-906a71c7044c owl:NamedIndividual Sst Chodl CLM:1000083 A Sst Chodl in the Human Brain has the gene markers NPY with a NS-Forest FBeta value of 0.894026187s. NCBITaxon:9606 +http://example.org/58c601b4-bff0-5d0b-b213-ff22c11b07ed owl:NamedIndividual VLMC CLM:1000084 A VLMC in the Human Brain has the gene markers CARMN with a NS-Forest FBeta value of 0.863105175s. NCBITaxon:9606 +http://example.org/fa40cb41-333e-57de-a6f6-b91d9c36d80a owl:NamedIndividual VLMC CLM:1000084 A VLMC in the Human Brain has the gene markers CARMN with a NS-Forest FBeta value of 0.863105175s. NCBITaxon:9606 +http://example.org/094c4cd8-3002-5e4f-937d-c84d8c9c1f6d owl:NamedIndividual Vip CLM:1000085 A Vip in the Human Brain has the gene markers VIP with a NS-Forest FBeta value of 0.855531344s. NCBITaxon:9606 +http://example.org/5a897c51-9e24-5ac5-af82-020dcc94f5f7 owl:NamedIndividual Vip CLM:1000085 A Vip in the Human Brain has the gene markers VIP with a NS-Forest FBeta value of 0.855531344s. NCBITaxon:9606 +http://example.org/2ff120ba-bb3d-5cf7-a945-ac45b6929de0 owl:NamedIndividual Astro_1 CLM:1001086 A Astro_1 in the Human Brain has the gene markers SLC1A3, HPSE2 with a NS-Forest FBeta value of 0.6796875s. NCBITaxon:9606 +http://example.org/6fdb13b4-30ff-5951-b72d-6291263b50c9 owl:NamedIndividual Astro_1 CLM:1001086 A Astro_1 in the Human Brain has the gene markers SLC1A3, HPSE2 with a NS-Forest FBeta value of 0.6796875s. NCBITaxon:9606 +http://example.org/1a7151c5-448a-54fc-9dac-826a5e957e7a owl:NamedIndividual Astro_2 CLM:1001087 A Astro_2 in the Human Brain has the gene markers LINC01411, OBI1-AS1 with a NS-Forest FBeta value of 0.5566801619433198s. NCBITaxon:9606 +http://example.org/9f82188c-bd91-599c-9113-28edfc33e7fd owl:NamedIndividual Astro_2 CLM:1001087 A Astro_2 in the Human Brain has the gene markers LINC01411, OBI1-AS1 with a NS-Forest FBeta value of 0.5566801619433198s. NCBITaxon:9606 +http://example.org/bf89bcc6-ae10-586a-ac86-e4555f50114c owl:NamedIndividual Astro_3 CLM:1001088 A Astro_3 in the Human Brain has the gene markers HEPN1, F3, AGT, GJA1, AQP4 with a NS-Forest FBeta value of 0.5711722488038278s. NCBITaxon:9606 +http://example.org/017d6c72-e7fd-5da0-b339-cf41c9dec014 owl:NamedIndividual Astro_3 CLM:1001088 A Astro_3 in the Human Brain has the gene markers HEPN1, F3, AGT, GJA1, AQP4 with a NS-Forest FBeta value of 0.5711722488038278s. NCBITaxon:9606 +http://example.org/3441c107-1ddf-5c54-ab62-fef0004c25d8 owl:NamedIndividual Astro_4 CLM:1001089 A Astro_4 in the Human Brain has the gene markers PPP1R3C, ETNPPL, ID4, OBI1-AS1 with a NS-Forest FBeta value of 0.47279792746113986s. NCBITaxon:9606 +http://example.org/8a2425e6-0de6-5e85-a1f6-dc0f6c10d913 owl:NamedIndividual Astro_4 CLM:1001089 A Astro_4 in the Human Brain has the gene markers PPP1R3C, ETNPPL, ID4, OBI1-AS1 with a NS-Forest FBeta value of 0.47279792746113986s. NCBITaxon:9606 +http://example.org/1ed5c9b6-1f52-5ce9-8dbf-6e1d39e8d767 owl:NamedIndividual Astro_5 CLM:1001090 A Astro_5 in the Human Brain has the gene markers TNC, CD44 with a NS-Forest FBeta value of 0.7512626262626262s. NCBITaxon:9606 +http://example.org/e1311248-e8ee-50b4-9848-72e586bd0c96 owl:NamedIndividual Astro_5 CLM:1001090 A Astro_5 in the Human Brain has the gene markers TNC, CD44 with a NS-Forest FBeta value of 0.7512626262626262s. NCBITaxon:9606 +http://example.org/a57d172b-80be-50ce-a0b7-e1ec6b4d6469 owl:NamedIndividual Chandelier_1 CLM:1001091 A Chandelier_1 in the Human Brain has the gene markers CA8, GPR149 with a NS-Forest FBeta value of 0.7997481108312343s. NCBITaxon:9606 +http://example.org/7772db65-7667-5c09-9895-12790af6d02a owl:NamedIndividual Endo_1 CLM:1001092 A Endo_1 in the Human Brain has the gene markers COLEC12, VWF, FLT1, ABCG2 with a NS-Forest FBeta value of 0.831353919239905s. NCBITaxon:9606 +http://example.org/bef8deb2-682e-56c3-9e4a-e0d4e88328e6 owl:NamedIndividual Endo_2 CLM:1001093 A Endo_2 in the Human Brain has the gene markers HERC2P3, PRKCH with a NS-Forest FBeta value of 0.8270877944325483s. NCBITaxon:9606 +http://example.org/c5615c94-4297-5bb6-affe-35e4162bc9c0 owl:NamedIndividual L2/3 IT_1 CLM:1001094 A L2/3 IT_1 in the Human Brain has the gene markers PRSS12, ROS1, COL5A2, SLC38A11 with a NS-Forest FBeta value of 0.5517711171662125s. NCBITaxon:9606 +http://example.org/2f2926a8-3258-5ce8-b8cb-df93061dbdfb owl:NamedIndividual L2/3 IT_1 CLM:1001094 A L2/3 IT_1 in the Human Brain has the gene markers PRSS12, ROS1, COL5A2, SLC38A11 with a NS-Forest FBeta value of 0.5517711171662125s. NCBITaxon:9606 +http://example.org/ee0a1886-c424-5ef6-b30b-2f3f29c381ad owl:NamedIndividual L2/3 IT_2 CLM:1001095 A L2/3 IT_2 in the Human Brain has the gene markers THSD4, TESPA1, TRPC3 with a NS-Forest FBeta value of 0.6621140142517815s. NCBITaxon:9606 +http://example.org/ae1cef1c-594b-55ec-851d-c013e92608c1 owl:NamedIndividual L2/3 IT_2 CLM:1001095 A L2/3 IT_2 in the Human Brain has the gene markers THSD4, TESPA1, TRPC3 with a NS-Forest FBeta value of 0.6621140142517815s. NCBITaxon:9606 +http://example.org/6aa60a29-474e-5b4d-861c-f1ecb95a4eb2 owl:NamedIndividual L2/3 IT_3 CLM:1001096 A L2/3 IT_3 in the Human Brain has the gene markers COL27A1, ONECUT2, MOXD1, BMPR1B with a NS-Forest FBeta value of 0.675117924528302s. NCBITaxon:9606 +http://example.org/d781b304-b8fc-5868-81b4-3cc113c8165f owl:NamedIndividual L2/3 IT_3 CLM:1001096 A L2/3 IT_3 in the Human Brain has the gene markers COL27A1, ONECUT2, MOXD1, BMPR1B with a NS-Forest FBeta value of 0.675117924528302s. NCBITaxon:9606 +http://example.org/bfa7d1c5-b072-5e4c-931c-06e4258688e6 owl:NamedIndividual L2/3 IT_4 CLM:1001097 A L2/3 IT_4 in the Human Brain has the gene markers TPBG, FAP, ONECUT2, COL5A2 with a NS-Forest FBeta value of 0.6337047353760445s. NCBITaxon:9606 +http://example.org/c38be215-5341-5ac3-b916-f28efd10ddf6 owl:NamedIndividual L2/3 IT_4 CLM:1001097 A L2/3 IT_4 in the Human Brain has the gene markers TPBG, FAP, ONECUT2, COL5A2 with a NS-Forest FBeta value of 0.6337047353760445s. NCBITaxon:9606 +http://example.org/9acf62d3-efb7-58be-9db1-987a795a62cd owl:NamedIndividual L2/3 IT_5 CLM:1001098 A L2/3 IT_5 in the Human Brain has the gene markers GPX3, ADCYAP1, RMST with a NS-Forest FBeta value of 0.5061141304347826s. NCBITaxon:9606 +http://example.org/09e1dbd4-a184-50b4-aaf9-6d6f833653ff owl:NamedIndividual L2/3 IT_5 CLM:1001098 A L2/3 IT_5 in the Human Brain has the gene markers GPX3, ADCYAP1, RMST with a NS-Forest FBeta value of 0.5061141304347826s. NCBITaxon:9606 +http://example.org/515ceee6-c931-5335-a614-848f8aa99014 owl:NamedIndividual L2/3 IT_6 CLM:1001099 A L2/3 IT_6 in the Human Brain has the gene markers LINC00507, ADAMTS3, LY86-AS1 with a NS-Forest FBeta value of 0.5509868421052632s. NCBITaxon:9606 +http://example.org/83076678-c74e-5665-86fb-1f738129ca45 owl:NamedIndividual L2/3 IT_6 CLM:1001099 A L2/3 IT_6 in the Human Brain has the gene markers LINC00507, ADAMTS3, LY86-AS1 with a NS-Forest FBeta value of 0.5509868421052632s. NCBITaxon:9606 +http://example.org/b89be3e2-8e24-5f56-b365-0ca4845b9cbe owl:NamedIndividual L4 IT_1 CLM:1001100 A L4 IT_1 in the Human Brain has the gene markers TPBG, RP11-197K6.1, ST8SIA4 with a NS-Forest FBeta value of 0.6129032258064517s. NCBITaxon:9606 +http://example.org/75d61169-6e4a-5397-93c0-bcad3cc06500 owl:NamedIndividual L4 IT_1 CLM:1001100 A L4 IT_1 in the Human Brain has the gene markers TPBG, RP11-197K6.1, ST8SIA4 with a NS-Forest FBeta value of 0.6129032258064517s. NCBITaxon:9606 +http://example.org/852bf5b0-70c7-5de4-92a3-aeca178e0c90 owl:NamedIndividual L4 IT_2 CLM:1001101 A L4 IT_2 in the Human Brain has the gene markers C6orf141, ST8SIA4 with a NS-Forest FBeta value of 0.7738095238095238s. NCBITaxon:9606 +http://example.org/013bca8c-94bc-5638-8fba-bbc94411b653 owl:NamedIndividual L4 IT_2 CLM:1001101 A L4 IT_2 in the Human Brain has the gene markers C6orf141, ST8SIA4 with a NS-Forest FBeta value of 0.7738095238095238s. NCBITaxon:9606 +http://example.org/9a28d521-afa0-56a6-b670-be7d86609b76 owl:NamedIndividual L4 IT_3 CLM:1001102 A L4 IT_3 in the Human Brain has the gene markers TMEM215, KCNH8, RORB with a NS-Forest FBeta value of 0.6151315789473684s. NCBITaxon:9606 +http://example.org/1800bc0a-0e49-5071-9e8e-78f40a1c652b owl:NamedIndividual L4 IT_3 CLM:1001102 A L4 IT_3 in the Human Brain has the gene markers TMEM215, KCNH8, RORB with a NS-Forest FBeta value of 0.6151315789473684s. NCBITaxon:9606 +http://example.org/3ba3aa5e-ea84-51fe-a9f4-7909c0d4aad7 owl:NamedIndividual L4 IT_4 CLM:1001103 A L4 IT_4 in the Human Brain has the gene markers STAC, KCNH8, SYT2 with a NS-Forest FBeta value of 0.6526243093922651s. NCBITaxon:9606 +http://example.org/1fa83ce7-1ec2-580f-9ce0-3fbcfd41bbf0 owl:NamedIndividual L4 IT_4 CLM:1001103 A L4 IT_4 in the Human Brain has the gene markers STAC, KCNH8, SYT2 with a NS-Forest FBeta value of 0.6526243093922651s. NCBITaxon:9606 +http://example.org/5e6635dc-e122-5e03-b1f4-5d7d7ba986df owl:NamedIndividual L4 IT_5 CLM:1001104 A L4 IT_5 in the Human Brain has the gene markers COL22A1, CMAHP with a NS-Forest FBeta value of 0.6576797385620915s. NCBITaxon:9606 +http://example.org/303c6892-88aa-5f88-9360-1f3764b73e4a owl:NamedIndividual L4 IT_5 CLM:1001104 A L4 IT_5 in the Human Brain has the gene markers COL22A1, CMAHP with a NS-Forest FBeta value of 0.6576797385620915s. NCBITaxon:9606 +http://example.org/fb2b7612-a242-51e3-a932-bf1ae7e35fb1 owl:NamedIndividual L4 IT_6 CLM:1001105 A L4 IT_6 in the Human Brain has the gene markers PLEKHH2, CLMN, ST8SIA4 with a NS-Forest FBeta value of 0.6703910614525139s. NCBITaxon:9606 +http://example.org/296ebb61-658c-574d-8c6b-8d973bb09401 owl:NamedIndividual L4 IT_6 CLM:1001105 A L4 IT_6 in the Human Brain has the gene markers PLEKHH2, CLMN, ST8SIA4 with a NS-Forest FBeta value of 0.6703910614525139s. NCBITaxon:9606 +http://example.org/6b43f98e-8399-55b8-bdeb-d720df31fdd7 owl:NamedIndividual L5 ET_1 CLM:1001106 A L5 ET_1 in the Human Brain has the gene markers LINC00922, POU3F1 with a NS-Forest FBeta value of 0.728891820580475s. NCBITaxon:9606 +http://example.org/b1e6ca2a-d834-5899-b673-c22cd05953d5 owl:NamedIndividual L5 ET_1 CLM:1001106 A L5 ET_1 in the Human Brain has the gene markers LINC00922, POU3F1 with a NS-Forest FBeta value of 0.728891820580475s. NCBITaxon:9606 +http://example.org/fc6aa65a-c788-5452-849b-973fc2821a29 owl:NamedIndividual L5 ET_2 CLM:1001107 A L5 ET_2 in the Human Brain has the gene markers ATP6V1C2, LRP2, ST8SIA2 with a NS-Forest FBeta value of 0.7593749999999999s. NCBITaxon:9606 +http://example.org/864f1d2c-d0a4-54c4-b582-429ab072f250 owl:NamedIndividual L5 ET_2 CLM:1001107 A L5 ET_2 in the Human Brain has the gene markers ATP6V1C2, LRP2, ST8SIA2 with a NS-Forest FBeta value of 0.7593749999999999s. NCBITaxon:9606 +http://example.org/8b450dd8-cead-58b4-ba96-8ae2466b9d3a owl:NamedIndividual L5 ET_3 CLM:1001108 A L5 ET_3 in the Human Brain has the gene markers ONECUT1, TTC6, SEMA3D, FAM189A2 with a NS-Forest FBeta value of 0.8891454965357967s. NCBITaxon:9606 +http://example.org/395a60fc-8eb6-59fd-8e7f-2b2aa2ee1f19 owl:NamedIndividual L5 ET_3 CLM:1001108 A L5 ET_3 in the Human Brain has the gene markers ONECUT1, TTC6, SEMA3D, FAM189A2 with a NS-Forest FBeta value of 0.8891454965357967s. NCBITaxon:9606 +http://example.org/49159815-25ad-57ec-99db-2ed6ed08c7dc owl:NamedIndividual L5 ET_4 CLM:1001109 A L5 ET_4 in the Human Brain has the gene markers EHF, FGF11 with a NS-Forest FBeta value of 0.7297605473204105s. NCBITaxon:9606 +http://example.org/bc609f94-b606-5960-827b-9459c5b6e6b8 owl:NamedIndividual L5 IT_1 CLM:1001110 A L5 IT_1 in the Human Brain has the gene markers CHST2, TLL1, RORB with a NS-Forest FBeta value of 0.6250000000000001s. NCBITaxon:9606 +http://example.org/25b79a5e-899a-57e1-94b6-885515a3ebfc owl:NamedIndividual L5 IT_1 CLM:1001110 A L5 IT_1 in the Human Brain has the gene markers CHST2, TLL1, RORB with a NS-Forest FBeta value of 0.6250000000000001s. NCBITaxon:9606 +http://example.org/dd13ce9f-9057-5126-9f73-dbe6290d6061 owl:NamedIndividual L5 IT_2 CLM:1001111 A L5 IT_2 in the Human Brain has the gene markers NPY2R, PCED1B, TLL1, RORB with a NS-Forest FBeta value of 0.5685240963855422s. NCBITaxon:9606 +http://example.org/11814b28-93a8-5db9-9002-ca420c5fdfdf owl:NamedIndividual L5 IT_2 CLM:1001111 A L5 IT_2 in the Human Brain has the gene markers NPY2R, PCED1B, TLL1, RORB with a NS-Forest FBeta value of 0.5685240963855422s. NCBITaxon:9606 +http://example.org/6dcf455c-31bd-58cd-9bff-d62b1871cd3a owl:NamedIndividual L5 IT_3 CLM:1001112 A L5 IT_3 in the Human Brain has the gene markers RPRM, HPCA, RORB with a NS-Forest FBeta value of 0.49479166666666663s. NCBITaxon:9606 +http://example.org/4b664b3d-ac50-5edd-911d-04a84cdf4e32 owl:NamedIndividual L5 IT_3 CLM:1001112 A L5 IT_3 in the Human Brain has the gene markers RPRM, HPCA, RORB with a NS-Forest FBeta value of 0.49479166666666663s. NCBITaxon:9606 +http://example.org/f4619e6f-b495-5aeb-93d9-1e724575db7b owl:NamedIndividual L5 IT_4 CLM:1001113 A L5 IT_4 in the Human Brain has the gene markers C22orf34, LDLRAD3, RORB, KCNK2 with a NS-Forest FBeta value of 0.44211195928753183s. NCBITaxon:9606 +http://example.org/8f965f2a-b73f-5ebb-a3a0-5b56d2127ba9 owl:NamedIndividual L5 IT_4 CLM:1001113 A L5 IT_4 in the Human Brain has the gene markers C22orf34, LDLRAD3, RORB, KCNK2 with a NS-Forest FBeta value of 0.44211195928753183s. NCBITaxon:9606 +http://example.org/118e4f6e-7378-5fc7-8703-43ff8b84c11c owl:NamedIndividual L5 IT_5 CLM:1001114 A L5 IT_5 in the Human Brain has the gene markers NPNT, CA10, RORB, KCNK2 with a NS-Forest FBeta value of 0.5813953488372092s. NCBITaxon:9606 +http://example.org/20b00f70-7a34-510a-9f91-2632f77e429b owl:NamedIndividual L5 IT_5 CLM:1001114 A L5 IT_5 in the Human Brain has the gene markers NPNT, CA10, RORB, KCNK2 with a NS-Forest FBeta value of 0.5813953488372092s. NCBITaxon:9606 +http://example.org/90cccea2-6614-5179-bca7-a81a39edba61 owl:NamedIndividual L5 IT_6 CLM:1001115 A L5 IT_6 in the Human Brain has the gene markers NPFFR2, SULF2, RORB with a NS-Forest FBeta value of 0.6619822485207101s. NCBITaxon:9606 +http://example.org/5ce650bd-4b06-5078-af77-d194161a51d5 owl:NamedIndividual L5 IT_6 CLM:1001115 A L5 IT_6 in the Human Brain has the gene markers NPFFR2, SULF2, RORB with a NS-Forest FBeta value of 0.6619822485207101s. NCBITaxon:9606 +http://example.org/532fc6b2-507e-5854-b8cc-ced9a8d75238 owl:NamedIndividual L5/6 NP_1 CLM:1001116 A L5/6 NP_1 in the Human Brain has the gene markers BARX2, CD36, NPSR1-AS1 with a NS-Forest FBeta value of 0.49025974025974034s. NCBITaxon:9606 +http://example.org/e24a2817-5270-5878-9aa8-f0b6beef8447 owl:NamedIndividual L5/6 NP_1 CLM:1001116 A L5/6 NP_1 in the Human Brain has the gene markers BARX2, CD36, NPSR1-AS1 with a NS-Forest FBeta value of 0.49025974025974034s. NCBITaxon:9606 +http://example.org/6c174d26-750e-5bf2-b48a-7d93f356b254 owl:NamedIndividual L5/6 NP_2 CLM:1001117 A L5/6 NP_2 in the Human Brain has the gene markers SLC17A6, CRYM with a NS-Forest FBeta value of 0.4607508532423208s. NCBITaxon:9606 +http://example.org/71d904fd-f2d3-5066-bb13-a99fd02ce07e owl:NamedIndividual L5/6 NP_2 CLM:1001117 A L5/6 NP_2 in the Human Brain has the gene markers SLC17A6, CRYM with a NS-Forest FBeta value of 0.4607508532423208s. NCBITaxon:9606 +http://example.org/d443974f-1ebd-5c14-8ec6-7a0c3f50f3b2 owl:NamedIndividual L5/6 NP_3 CLM:1001118 A L5/6 NP_3 in the Human Brain has the gene markers NPSR1-AS1, PLPP3, KIT with a NS-Forest FBeta value of 0.5273892773892773s. NCBITaxon:9606 +http://example.org/dc59eae8-c453-5aea-bef9-68f7ed66d8c6 owl:NamedIndividual L5/6 NP_3 CLM:1001118 A L5/6 NP_3 in the Human Brain has the gene markers NPSR1-AS1, PLPP3, KIT with a NS-Forest FBeta value of 0.5273892773892773s. NCBITaxon:9606 +http://example.org/87f3616a-6eaf-566a-9416-8df02a938582 owl:NamedIndividual L5/6 NP_4 CLM:1001119 A L5/6 NP_4 in the Human Brain has the gene markers FSHR, CLMN, TLL1 with a NS-Forest FBeta value of 0.740632318501171s. NCBITaxon:9606 +http://example.org/3d64eb99-dfa9-598f-9a97-ccee6a2b8f10 owl:NamedIndividual L5/6 NP_4 CLM:1001119 A L5/6 NP_4 in the Human Brain has the gene markers FSHR, CLMN, TLL1 with a NS-Forest FBeta value of 0.740632318501171s. NCBITaxon:9606 +http://example.org/0e09fa65-9846-5a95-b9d5-6e8052ee4df1 owl:NamedIndividual L5/6 NP_5 CLM:1001120 A L5/6 NP_5 in the Human Brain has the gene markers COL9A1, NPSR1, TLL1 with a NS-Forest FBeta value of 0.5373831775700935s. NCBITaxon:9606 +http://example.org/65fcc9e2-6b89-5c4b-b320-acd53356937d owl:NamedIndividual L5/6 NP_5 CLM:1001120 A L5/6 NP_5 in the Human Brain has the gene markers COL9A1, NPSR1, TLL1 with a NS-Forest FBeta value of 0.5373831775700935s. NCBITaxon:9606 +http://example.org/a0401fb6-eba5-5d4f-a22a-7191180df638 owl:NamedIndividual L5/6 NP_6 CLM:1001121 A L5/6 NP_6 in the Human Brain has the gene markers NPSR1-AS1, ARHGAP42 with a NS-Forest FBeta value of 0.7685614849187936s. NCBITaxon:9606 +http://example.org/59caff3f-4d4c-548d-956e-64862776ab8d owl:NamedIndividual L6 CT_1 CLM:1001122 A L6 CT_1 in the Human Brain has the gene markers LGR6, OR1Q1, SULF1 with a NS-Forest FBeta value of 0.665374677002584s. NCBITaxon:9606 +http://example.org/c65f8ed6-9991-5fcc-b13e-6ed05809b482 owl:NamedIndividual L6 CT_1 CLM:1001122 A L6 CT_1 in the Human Brain has the gene markers LGR6, OR1Q1, SULF1 with a NS-Forest FBeta value of 0.665374677002584s. NCBITaxon:9606 +http://example.org/0eb61f5e-9fd4-5033-bea0-0ff0105f7462 owl:NamedIndividual L6 CT_2 CLM:1001123 A L6 CT_2 in the Human Brain has the gene markers SYT6, ITGA11, SEMA5B with a NS-Forest FBeta value of 0.791868932038835s. NCBITaxon:9606 +http://example.org/fa2356b6-e279-54ef-840b-9ab62a3b9793 owl:NamedIndividual L6 CT_2 CLM:1001123 A L6 CT_2 in the Human Brain has the gene markers SYT6, ITGA11, SEMA5B with a NS-Forest FBeta value of 0.791868932038835s. NCBITaxon:9606 +http://example.org/5bcc50dd-a204-5efc-afd6-6eac2c7fac01 owl:NamedIndividual L6 CT_3 CLM:1001124 A L6 CT_3 in the Human Brain has the gene markers SULF1, MEIS2, ADAMTSL1, KCNH5 with a NS-Forest FBeta value of 0.632267441860465s. NCBITaxon:9606 +http://example.org/df391a0c-4270-583f-bcf0-944afbf52db6 owl:NamedIndividual L6 CT_3 CLM:1001124 A L6 CT_3 in the Human Brain has the gene markers SULF1, MEIS2, ADAMTSL1, KCNH5 with a NS-Forest FBeta value of 0.632267441860465s. NCBITaxon:9606 +http://example.org/0245cc6b-0034-5acf-bf46-ed8dbe21730c owl:NamedIndividual L6 IT Car3_1 CLM:1001125 A L6 IT Car3_1 in the Human Brain has the gene markers LINC00348 with a NS-Forest FBeta value of 0.665s. NCBITaxon:9606 +http://example.org/d0a71210-7b78-57df-a330-58b206a17eb1 owl:NamedIndividual L6 IT Car3_1 CLM:1001125 A L6 IT Car3_1 in the Human Brain has the gene markers LINC00348 with a NS-Forest FBeta value of 0.665s. NCBITaxon:9606 +http://example.org/e38bc3d0-438b-593e-aa63-8c8f83a5e13f owl:NamedIndividual L6 IT Car3_2 CLM:1001126 A L6 IT Car3_2 in the Human Brain has the gene markers SMYD1, ITGB8 with a NS-Forest FBeta value of 0.6594036697247707s. NCBITaxon:9606 +http://example.org/0b4ea8e2-87de-526c-8904-5f9546b79e24 owl:NamedIndividual L6 IT Car3_2 CLM:1001126 A L6 IT Car3_2 in the Human Brain has the gene markers SMYD1, ITGB8 with a NS-Forest FBeta value of 0.6594036697247707s. NCBITaxon:9606 +http://example.org/9eca2b80-781f-567d-b31b-a1b9caed628b owl:NamedIndividual L6 IT_1 CLM:1001127 A L6 IT_1 in the Human Brain has the gene markers THEMIS, HOPX, MKX with a NS-Forest FBeta value of 0.6710122699386504s. NCBITaxon:9606 +http://example.org/f5aa7213-1655-57ae-b2d3-2e47cdd699e7 owl:NamedIndividual L6 IT_1 CLM:1001127 A L6 IT_1 in the Human Brain has the gene markers THEMIS, HOPX, MKX with a NS-Forest FBeta value of 0.6710122699386504s. NCBITaxon:9606 +http://example.org/70e6b62a-8054-5390-9cc4-715eaa311a76 owl:NamedIndividual L6 IT_2 CLM:1001128 A L6 IT_2 in the Human Brain has the gene markers LINC00343, ADAMTS3, PXDN with a NS-Forest FBeta value of 0.5810546875s. NCBITaxon:9606 +http://example.org/309a5ea0-06d4-57ad-830f-9d31c64de81c owl:NamedIndividual L6 IT_2 CLM:1001128 A L6 IT_2 in the Human Brain has the gene markers LINC00343, ADAMTS3, PXDN with a NS-Forest FBeta value of 0.5810546875s. NCBITaxon:9606 +http://example.org/1bcefc63-aa07-5cca-8d81-7573fe9782bd owl:NamedIndividual L6b_1 CLM:1001129 A L6b_1 in the Human Brain has the gene markers SEMA3D, ITGA11, FAM160A1 with a NS-Forest FBeta value of 0.5724637681159421s. NCBITaxon:9606 +http://example.org/b9fd4abd-a099-55fa-9f9c-0f49a7981760 owl:NamedIndividual L6b_1 CLM:1001129 A L6b_1 in the Human Brain has the gene markers SEMA3D, ITGA11, FAM160A1 with a NS-Forest FBeta value of 0.5724637681159421s. NCBITaxon:9606 +http://example.org/924aa72f-5ace-5565-b1b8-393486b8ff10 owl:NamedIndividual L6b_2 CLM:1001130 A L6b_2 in the Human Brain has the gene markers NPFFR2, ROS1 with a NS-Forest FBeta value of 0.565711462450593s. NCBITaxon:9606 +http://example.org/ab77d720-83e9-5b1a-a0b8-da19409a60f9 owl:NamedIndividual L6b_2 CLM:1001130 A L6b_2 in the Human Brain has the gene markers NPFFR2, ROS1 with a NS-Forest FBeta value of 0.565711462450593s. NCBITaxon:9606 +http://example.org/441356e1-ec1c-5cfe-a1ec-67295dde7c7c owl:NamedIndividual L6b_3 CLM:1001131 A L6b_3 in the Human Brain has the gene markers SLC15A5, ATP10A with a NS-Forest FBeta value of 0.6928969359331476s. NCBITaxon:9606 +http://example.org/448d068f-c29d-5f30-ae31-75625d73a9aa owl:NamedIndividual L6b_3 CLM:1001131 A L6b_3 in the Human Brain has the gene markers SLC15A5, ATP10A with a NS-Forest FBeta value of 0.6928969359331476s. NCBITaxon:9606 +http://example.org/21ca11b6-0a8d-5d1f-b9a3-6601f36ad139 owl:NamedIndividual L6b_4 CLM:1001132 A L6b_4 in the Human Brain has the gene markers NR4A2, ATP8B4 with a NS-Forest FBeta value of 0.5812101910828025s. NCBITaxon:9606 +http://example.org/caf7aad2-b748-53c9-b45c-eec3977cfc01 owl:NamedIndividual L6b_4 CLM:1001132 A L6b_4 in the Human Brain has the gene markers NR4A2, ATP8B4 with a NS-Forest FBeta value of 0.5812101910828025s. NCBITaxon:9606 +http://example.org/e223a1c4-1b0f-5d64-a3d3-4df361a8ffa7 owl:NamedIndividual L6b_5 CLM:1001133 A L6b_5 in the Human Brain has the gene markers NXPH4, NR4A2, SEMA3E with a NS-Forest FBeta value of 0.5693519079345852s. NCBITaxon:9606 +http://example.org/b1bc226c-032a-54ea-adee-7d7693ea705e owl:NamedIndividual L6b_5 CLM:1001133 A L6b_5 in the Human Brain has the gene markers NXPH4, NR4A2, SEMA3E with a NS-Forest FBeta value of 0.5693519079345852s. NCBITaxon:9606 +http://example.org/87cc1b82-7ec4-5a9d-98b9-203eededbd63 owl:NamedIndividual L6b_6 CLM:1001134 A L6b_6 in the Human Brain has the gene markers PCOLCE2, FAM160A1, SULF1 with a NS-Forest FBeta value of 0.570388349514563s. NCBITaxon:9606 +http://example.org/889d386a-f955-5d07-a815-783e726f9b89 owl:NamedIndividual L6b_6 CLM:1001134 A L6b_6 in the Human Brain has the gene markers PCOLCE2, FAM160A1, SULF1 with a NS-Forest FBeta value of 0.570388349514563s. NCBITaxon:9606 +http://example.org/b6cbb644-17cb-58e8-bb59-1c07444ee029 owl:NamedIndividual Lamp5 Lhx6_1 CLM:1001135 A Lamp5 Lhx6_1 in the Human Brain has the gene markers CHST9, LAMP5 with a NS-Forest FBeta value of 0.8216783216783217s. NCBITaxon:9606 +http://example.org/975fa71a-d17d-5fc1-9753-278aa64dc4b8 owl:NamedIndividual Lamp5_1 CLM:1001136 A Lamp5_1 in the Human Brain has the gene markers ADAMTS20, KIT, FREM1 with a NS-Forest FBeta value of 0.48856548856548865s. NCBITaxon:9606 +http://example.org/5b0db653-a972-52d2-b2f8-a7bbee742799 owl:NamedIndividual Lamp5_1 CLM:1001136 A Lamp5_1 in the Human Brain has the gene markers ADAMTS20, KIT, FREM1 with a NS-Forest FBeta value of 0.48856548856548865s. NCBITaxon:9606 +http://example.org/08bc9830-9e0a-5dc3-a051-d473ad150724 owl:NamedIndividual Lamp5_2 CLM:1001137 A Lamp5_2 in the Human Brain has the gene markers PBX3, KIT with a NS-Forest FBeta value of 0.7316272965879266s. NCBITaxon:9606 +http://example.org/bbb9c322-4893-53ee-9871-27093732e30b owl:NamedIndividual Lamp5_2 CLM:1001137 A Lamp5_2 in the Human Brain has the gene markers PBX3, KIT with a NS-Forest FBeta value of 0.7316272965879266s. NCBITaxon:9606 +http://example.org/fe10caee-1f72-5d67-a625-225076d029bb owl:NamedIndividual Lamp5_3 CLM:1001138 A Lamp5_3 in the Human Brain has the gene markers CA2, CPLX3, LAMP5 with a NS-Forest FBeta value of 0.6311576354679802s. NCBITaxon:9606 +http://example.org/2eb90252-5a26-51ee-a031-a537f9a4bb5a owl:NamedIndividual Lamp5_3 CLM:1001138 A Lamp5_3 in the Human Brain has the gene markers CA2, CPLX3, LAMP5 with a NS-Forest FBeta value of 0.6311576354679802s. NCBITaxon:9606 +http://example.org/f4e3af37-4b86-588d-8580-20ab70350b57 owl:NamedIndividual Lamp5_4 CLM:1001139 A Lamp5_4 in the Human Brain has the gene markers ROR2, TRPC3, FBXL7, LINC00298 with a NS-Forest FBeta value of 0.40425531914893614s. NCBITaxon:9606 +http://example.org/de0baa56-5512-5033-9a4e-998671328697 owl:NamedIndividual Lamp5_4 CLM:1001139 A Lamp5_4 in the Human Brain has the gene markers ROR2, TRPC3, FBXL7, LINC00298 with a NS-Forest FBeta value of 0.40425531914893614s. NCBITaxon:9606 +http://example.org/41a442a2-1c76-5e11-89eb-4732842dbc08 owl:NamedIndividual Lamp5_5 CLM:1001140 A Lamp5_5 in the Human Brain has the gene markers NDNF, NPNT, LAMP5 with a NS-Forest FBeta value of 0.6249999999999999s. NCBITaxon:9606 +http://example.org/2824d66a-9f1e-5f44-b040-b0a50191bd0b owl:NamedIndividual Lamp5_5 CLM:1001140 A Lamp5_5 in the Human Brain has the gene markers NDNF, NPNT, LAMP5 with a NS-Forest FBeta value of 0.6249999999999999s. NCBITaxon:9606 +http://example.org/3eb9ceff-aba9-56ab-8ca9-65ac7268bc36 owl:NamedIndividual Lamp5_6 CLM:1001141 A Lamp5_6 in the Human Brain has the gene markers NDNF, KIT, TRPC3 with a NS-Forest FBeta value of 0.6357493857493858s. NCBITaxon:9606 +http://example.org/57814aa7-ba76-5385-80ed-06a91dc142db owl:NamedIndividual Lamp5_6 CLM:1001141 A Lamp5_6 in the Human Brain has the gene markers NDNF, KIT, TRPC3 with a NS-Forest FBeta value of 0.6357493857493858s. NCBITaxon:9606 +http://example.org/8f871e7a-db10-53b4-8f87-f257bf972cec owl:NamedIndividual Lamp5_7 CLM:1001142 A Lamp5_7 in the Human Brain has the gene markers MYH11, MT-ND4L, KIT with a NS-Forest FBeta value of 0.42241379310344834s. NCBITaxon:9606 +http://example.org/22d84708-e779-5343-8e87-cc277cc3388d owl:NamedIndividual Oligo_1 CLM:1001145 A Oligo_1 in the Human Brain has the gene markers CERCAM, DOCK5 with a NS-Forest FBeta value of 0.24613623354321695s. NCBITaxon:9606 +http://example.org/8c0dd46d-e667-5962-919a-cc304e2b20a0 owl:NamedIndividual Oligo_1 CLM:1001145 A Oligo_1 in the Human Brain has the gene markers CERCAM, DOCK5 with a NS-Forest FBeta value of 0.24613623354321695s. NCBITaxon:9606 +http://example.org/5c0e921e-5977-5ca1-98e6-9c1df09cc2d2 owl:NamedIndividual Oligo_2 CLM:1001146 A Oligo_2 in the Human Brain has the gene markers MBOAT1, PLP1 with a NS-Forest FBeta value of 0.8189655172413793s. NCBITaxon:9606 +http://example.org/3566a2aa-18eb-584f-8b5f-db7cb35f006e owl:NamedIndividual Oligo_2 CLM:1001146 A Oligo_2 in the Human Brain has the gene markers MBOAT1, PLP1 with a NS-Forest FBeta value of 0.8189655172413793s. NCBITaxon:9606 +http://example.org/febe7cb8-6115-592d-b2ee-aa2c8bfcc5dc owl:NamedIndividual Oligo_3 CLM:1001147 A Oligo_3 in the Human Brain has the gene markers OPALIN, LINC01170 with a NS-Forest FBeta value of 0.713610586011342s. NCBITaxon:9606 +http://example.org/780dcde0-335f-59e0-8104-af9be12a4ab6 owl:NamedIndividual Oligo_3 CLM:1001147 A Oligo_3 in the Human Brain has the gene markers OPALIN, LINC01170 with a NS-Forest FBeta value of 0.713610586011342s. NCBITaxon:9606 +http://example.org/c7f22ea0-0644-5a0d-b13d-238be4ea0858 owl:NamedIndividual Oligo_4 CLM:1001148 A Oligo_4 in the Human Brain has the gene markers OPALIN, TRIM59, CERCAM with a NS-Forest FBeta value of 0.5434782608695652s. NCBITaxon:9606 +http://example.org/5bd9bd05-6bcf-5b18-a72d-edbc4e8608d2 owl:NamedIndividual Oligo_4 CLM:1001148 A Oligo_4 in the Human Brain has the gene markers OPALIN, TRIM59, CERCAM with a NS-Forest FBeta value of 0.5434782608695652s. NCBITaxon:9606 +http://example.org/8246e8bf-019e-593b-8988-faee4f9d6a66 owl:NamedIndividual Pax6_1 CLM:1001149 A Pax6_1 in the Human Brain has the gene markers IGFBP7, EPS8, HCRTR2 with a NS-Forest FBeta value of 0.767426273458445s. NCBITaxon:9606 +http://example.org/e3e346f1-ea9d-598d-b3d8-e6cd221d772a owl:NamedIndividual Pax6_1 CLM:1001149 A Pax6_1 in the Human Brain has the gene markers IGFBP7, EPS8, HCRTR2 with a NS-Forest FBeta value of 0.767426273458445s. NCBITaxon:9606 +http://example.org/7cb09d6e-019d-5eea-bee7-d9f71336fd59 owl:NamedIndividual Pax6_2 CLM:1001150 A Pax6_2 in the Human Brain has the gene markers TGFBR2, BCHE, RELN with a NS-Forest FBeta value of 0.7676056338028169s. NCBITaxon:9606 +http://example.org/0a295b69-49ff-5b42-bcc8-2f214b45dff3 owl:NamedIndividual Pax6_2 CLM:1001150 A Pax6_2 in the Human Brain has the gene markers TGFBR2, BCHE, RELN with a NS-Forest FBeta value of 0.7676056338028169s. NCBITaxon:9606 +http://example.org/98bbf553-8536-5984-be4c-ee14b1f62b87 owl:NamedIndividual Pax6_3 CLM:1001151 A Pax6_3 in the Human Brain has the gene markers PBX3, PDLIM5, FBN2 with a NS-Forest FBeta value of 0.7090163934426228s. NCBITaxon:9606 +http://example.org/ed42b487-4059-554f-87f8-4487017d3896 owl:NamedIndividual Pax6_3 CLM:1001151 A Pax6_3 in the Human Brain has the gene markers PBX3, PDLIM5, FBN2 with a NS-Forest FBeta value of 0.7090163934426228s. NCBITaxon:9606 +http://example.org/b9892cc5-6da9-58ed-9369-e07be078dbbb owl:NamedIndividual Pax6_4 CLM:1001152 A Pax6_4 in the Human Brain has the gene markers PALMD, RELN with a NS-Forest FBeta value of 0.8731422505307855s. NCBITaxon:9606 +http://example.org/8d277d2e-c58d-500c-9cfb-e4f109aaafe5 owl:NamedIndividual Pax6_4 CLM:1001152 A Pax6_4 in the Human Brain has the gene markers PALMD, RELN with a NS-Forest FBeta value of 0.8731422505307855s. NCBITaxon:9606 +http://example.org/b46bcd29-eafe-5377-b7ec-69c701664862 owl:NamedIndividual Pvalb_1 CLM:1001153 A Pvalb_1 in the Human Brain has the gene markers MYBPC1, GPR149, SVIL with a NS-Forest FBeta value of 0.6944444444444444s. NCBITaxon:9606 +http://example.org/185efaf1-b976-5d3e-824d-d9ef64d31db0 owl:NamedIndividual Pvalb_1 CLM:1001153 A Pvalb_1 in the Human Brain has the gene markers MYBPC1, GPR149, SVIL with a NS-Forest FBeta value of 0.6944444444444444s. NCBITaxon:9606 +http://example.org/42a5064f-aa11-5d12-a95d-4f62e8b70e38 owl:NamedIndividual Pvalb_2 CLM:1001154 A Pvalb_2 in the Human Brain has the gene markers BCHE, SEMA3C, GPC5 with a NS-Forest FBeta value of 0.7717391304347827s. NCBITaxon:9606 +http://example.org/897959f7-3a0c-5181-918f-ee4873b477d8 owl:NamedIndividual Pvalb_2 CLM:1001154 A Pvalb_2 in the Human Brain has the gene markers BCHE, SEMA3C, GPC5 with a NS-Forest FBeta value of 0.7717391304347827s. NCBITaxon:9606 +http://example.org/c1be7f2d-212a-5246-92c3-8e7994ef3003 owl:NamedIndividual Pvalb_3 CLM:1001155 A Pvalb_3 in the Human Brain has the gene markers TAFA4, SYT10, ANOS1, HTR4 with a NS-Forest FBeta value of 0.635593220338983s. NCBITaxon:9606 +http://example.org/04ab6149-7282-579f-a082-698ef7abb485 owl:NamedIndividual Pvalb_3 CLM:1001155 A Pvalb_3 in the Human Brain has the gene markers TAFA4, SYT10, ANOS1, HTR4 with a NS-Forest FBeta value of 0.635593220338983s. NCBITaxon:9606 +http://example.org/c3480f1a-6e04-5e59-89f9-1ee48be77034 owl:NamedIndividual Pvalb_4 CLM:1001156 A Pvalb_4 in the Human Brain has the gene markers MT-ND4L, RGS5_ENSG00000143248, WIF1, TAC1 with a NS-Forest FBeta value of 0.4390934844192635s. NCBITaxon:9606 +http://example.org/d429af9e-ed74-5440-9e7c-c8bb856082ee owl:NamedIndividual Pvalb_4 CLM:1001156 A Pvalb_4 in the Human Brain has the gene markers MT-ND4L, RGS5_ENSG00000143248, WIF1, TAC1 with a NS-Forest FBeta value of 0.4390934844192635s. NCBITaxon:9606 +http://example.org/9226d389-5899-5a14-a8fa-8f62bf664e3e owl:NamedIndividual Pvalb_5 CLM:1001157 A Pvalb_5 in the Human Brain has the gene markers SNTB1, COBLL1, GPR149, TAC1 with a NS-Forest FBeta value of 0.6364329268292682s. NCBITaxon:9606 +http://example.org/cd42f121-63a4-54c6-a874-88b267ef873c owl:NamedIndividual Pvalb_5 CLM:1001157 A Pvalb_5 in the Human Brain has the gene markers SNTB1, COBLL1, GPR149, TAC1 with a NS-Forest FBeta value of 0.6364329268292682s. NCBITaxon:9606 +http://example.org/d2303cb2-2009-5767-a4d6-816fc5ac0be5 owl:NamedIndividual Pvalb_6 CLM:1001158 A Pvalb_6 in the Human Brain has the gene markers POSTN, SULF1, CEMIP, RNF144B with a NS-Forest FBeta value of 0.29255319148936176s. NCBITaxon:9606 +http://example.org/16a30d55-141a-56b0-9919-aa6a1bbc24bb owl:NamedIndividual Pvalb_6 CLM:1001158 A Pvalb_6 in the Human Brain has the gene markers POSTN, SULF1, CEMIP, RNF144B with a NS-Forest FBeta value of 0.29255319148936176s. NCBITaxon:9606 +http://example.org/feb7b953-4de0-59a5-903c-e7bf6e0a3577 owl:NamedIndividual Pvalb_7 CLM:1001159 A Pvalb_7 in the Human Brain has the gene markers SULF1, ZNF385D-AS2 with a NS-Forest FBeta value of 0.5650087260034904s. NCBITaxon:9606 +http://example.org/2f71c672-dd2e-54a3-9cda-c3e8dcb9046c owl:NamedIndividual Pvalb_7 CLM:1001159 A Pvalb_7 in the Human Brain has the gene markers SULF1, ZNF385D-AS2 with a NS-Forest FBeta value of 0.5650087260034904s. NCBITaxon:9606 +http://example.org/868849a6-fdd7-5d12-b418-ab6fbac00182 owl:NamedIndividual Pvalb_8 CLM:1001160 A Pvalb_8 in the Human Brain has the gene markers CA8, FGFR2, TAC1 with a NS-Forest FBeta value of 0.5676733780760627s. NCBITaxon:9606 +http://example.org/3f10f5b4-0c4e-5d1a-a5e2-372ac7d13e63 owl:NamedIndividual Pvalb_8 CLM:1001160 A Pvalb_8 in the Human Brain has the gene markers CA8, FGFR2, TAC1 with a NS-Forest FBeta value of 0.5676733780760627s. NCBITaxon:9606 +http://example.org/9a7cc455-7278-5569-a1a2-cd3a7c6d0016 owl:NamedIndividual Pvalb_9 CLM:1001161 A Pvalb_9 in the Human Brain has the gene markers PVALB, POSTN with a NS-Forest FBeta value of 0.5845323741007195s. NCBITaxon:9606 +http://example.org/8273be13-f220-5f5c-bfa4-1760b66133f6 owl:NamedIndividual Pvalb_9 CLM:1001161 A Pvalb_9 in the Human Brain has the gene markers PVALB, POSTN with a NS-Forest FBeta value of 0.5845323741007195s. NCBITaxon:9606 +http://example.org/ca3ef774-ad2e-5a80-be05-c11eb1a3ea07 owl:NamedIndividual Sncg_1 CLM:1001162 A Sncg_1 in the Human Brain has the gene markers UNC5B, TAFA4, THSD7B with a NS-Forest FBeta value of 0.5883947939262474s. NCBITaxon:9606 +http://example.org/06f9cbf6-8be3-5fd0-aeb5-884e72565a15 owl:NamedIndividual Sncg_1 CLM:1001162 A Sncg_1 in the Human Brain has the gene markers UNC5B, TAFA4, THSD7B with a NS-Forest FBeta value of 0.5883947939262474s. NCBITaxon:9606 +http://example.org/4657b4ff-a181-57d5-bc0c-730dbdb0ae24 owl:NamedIndividual Sncg_2 CLM:1001163 A Sncg_2 in the Human Brain has the gene markers FOXO1, CA10, PRELID2, THSD7B with a NS-Forest FBeta value of 0.7396788990825688s. NCBITaxon:9606 +http://example.org/844bd41e-812b-5378-b4d6-6ef6fe40c0d3 owl:NamedIndividual Sncg_2 CLM:1001163 A Sncg_2 in the Human Brain has the gene markers FOXO1, CA10, PRELID2, THSD7B with a NS-Forest FBeta value of 0.7396788990825688s. NCBITaxon:9606 +http://example.org/6cecaa88-6816-57b1-b62c-0d3dd5ad66bd owl:NamedIndividual Sncg_3 CLM:1001164 A Sncg_3 in the Human Brain has the gene markers SEMA3C, MYO1B, VAV3 with a NS-Forest FBeta value of 0.4528985507246377s. NCBITaxon:9606 +http://example.org/e6a6aa88-bda1-5b17-9408-c3d250371609 owl:NamedIndividual Sncg_3 CLM:1001164 A Sncg_3 in the Human Brain has the gene markers SEMA3C, MYO1B, VAV3 with a NS-Forest FBeta value of 0.4528985507246377s. NCBITaxon:9606 +http://example.org/6791b32b-6a9a-570f-8cf6-0d7cbfc303a4 owl:NamedIndividual Sncg_4 CLM:1001165 A Sncg_4 in the Human Brain has the gene markers LINC01539, DCN, THSD7B with a NS-Forest FBeta value of 0.6752411575562701s. NCBITaxon:9606 +http://example.org/505fbaf3-71d6-5385-aa51-cb84473cb8ad owl:NamedIndividual Sncg_4 CLM:1001165 A Sncg_4 in the Human Brain has the gene markers LINC01539, DCN, THSD7B with a NS-Forest FBeta value of 0.6752411575562701s. NCBITaxon:9606 +http://example.org/93595eee-bb11-5458-b49e-22f9b2a26ef1 owl:NamedIndividual Sncg_5 CLM:1001166 A Sncg_5 in the Human Brain has the gene markers COL5A2, TMEM47, MEGF11 with a NS-Forest FBeta value of 0.5214285714285715s. NCBITaxon:9606 +http://example.org/5c7c827b-8a88-5144-8298-fd71750cd50f owl:NamedIndividual Sncg_5 CLM:1001166 A Sncg_5 in the Human Brain has the gene markers COL5A2, TMEM47, MEGF11 with a NS-Forest FBeta value of 0.5214285714285715s. NCBITaxon:9606 +http://example.org/24c315dd-91f2-536f-95e1-1b1b728b1bb2 owl:NamedIndividual Sncg_6 CLM:1001167 A Sncg_6 in the Human Brain has the gene markers THSD7B, ADAMTSL1, RELN with a NS-Forest FBeta value of 0.5738434163701067s. NCBITaxon:9606 +http://example.org/1060800b-a8cb-5821-b994-36336733cae7 owl:NamedIndividual Sncg_6 CLM:1001167 A Sncg_6 in the Human Brain has the gene markers THSD7B, ADAMTSL1, RELN with a NS-Forest FBeta value of 0.5738434163701067s. NCBITaxon:9606 +http://example.org/dcb66de1-d33e-570b-879b-57717a6009d1 owl:NamedIndividual Sncg_7 CLM:1001168 A Sncg_7 in the Human Brain has the gene markers HTR3A, SYT9, MCTP2 with a NS-Forest FBeta value of 0.7097791798107256s. NCBITaxon:9606 +http://example.org/b4dddbf5-b745-528d-a3f1-808858d75c7f owl:NamedIndividual Sncg_7 CLM:1001168 A Sncg_7 in the Human Brain has the gene markers HTR3A, SYT9, MCTP2 with a NS-Forest FBeta value of 0.7097791798107256s. NCBITaxon:9606 +http://example.org/85b7e478-4529-5648-8a50-7662177cfa41 owl:NamedIndividual Sncg_8 CLM:1001169 A Sncg_8 in the Human Brain has the gene markers NDST4, HTR2C, PRELID2 with a NS-Forest FBeta value of 0.49476135040745045s. NCBITaxon:9606 +http://example.org/cd80d87a-244c-511f-a22c-b0cb76537e3e owl:NamedIndividual Sncg_8 CLM:1001169 A Sncg_8 in the Human Brain has the gene markers NDST4, HTR2C, PRELID2 with a NS-Forest FBeta value of 0.49476135040745045s. NCBITaxon:9606 +http://example.org/f4c18ae3-2790-5f09-9f80-f47c7db0e06d owl:NamedIndividual Sst Chodl_1 CLM:1001170 A Sst Chodl_1 in the Human Brain has the gene markers NPY with a NS-Forest FBeta value of 0.894026186579378s. NCBITaxon:9606 +http://example.org/4ef997bd-764c-5398-9c84-c7235047a4f7 owl:NamedIndividual Sst_1 CLM:1001171 A Sst_1 in the Human Brain has the gene markers NDST4, ANGPT1, EPB41L4A with a NS-Forest FBeta value of 0.5104166666666666s. NCBITaxon:9606 +http://example.org/202d9151-96d8-571d-9d30-cb11ec2407ce owl:NamedIndividual Sst_1 CLM:1001171 A Sst_1 in the Human Brain has the gene markers NDST4, ANGPT1, EPB41L4A with a NS-Forest FBeta value of 0.5104166666666666s. NCBITaxon:9606 +http://example.org/6dad808a-fcf3-5bf4-8599-93351ea3ab66 owl:NamedIndividual Sst_2 CLM:1001172 A Sst_2 in the Human Brain has the gene markers HPGD, RGS5_ENSG00000143248, SPON1 with a NS-Forest FBeta value of 0.5613577023498695s. NCBITaxon:9606 +http://example.org/d2e93984-5463-520a-9f60-dd5af389d746 owl:NamedIndividual Sst_2 CLM:1001172 A Sst_2 in the Human Brain has the gene markers HPGD, RGS5_ENSG00000143248, SPON1 with a NS-Forest FBeta value of 0.5613577023498695s. NCBITaxon:9606 +http://example.org/6520b834-92d7-55aa-892b-6bdb28ce3a4e owl:NamedIndividual Sst_3 CLM:1001173 A Sst_3 in the Human Brain has the gene markers TCF7L1, FBXL7, CBLN2 with a NS-Forest FBeta value of 0.6936997319034853s. NCBITaxon:9606 +http://example.org/85fc0c94-39b3-564f-ae43-008a48f3b870 owl:NamedIndividual Sst_3 CLM:1001173 A Sst_3 in the Human Brain has the gene markers TCF7L1, FBXL7, CBLN2 with a NS-Forest FBeta value of 0.6936997319034853s. NCBITaxon:9606 +http://example.org/5642be59-e304-57d7-986f-526d1280392a owl:NamedIndividual Sst_4 CLM:1001174 A Sst_4 in the Human Brain has the gene markers SCARA5, PIEZO2, CRYBG3, PLCH1 with a NS-Forest FBeta value of 0.5479002624671917s. NCBITaxon:9606 +http://example.org/35e5a788-9834-55de-b254-75f7464c6149 owl:NamedIndividual Sst_4 CLM:1001174 A Sst_4 in the Human Brain has the gene markers SCARA5, PIEZO2, CRYBG3, PLCH1 with a NS-Forest FBeta value of 0.5479002624671917s. NCBITaxon:9606 +http://example.org/e07acbf2-4011-512f-953d-f23974a17cef owl:NamedIndividual Sst_5 CLM:1001175 A Sst_5 in the Human Brain has the gene markers SH3RF2, NPY, CALB1 with a NS-Forest FBeta value of 0.5248833592534992s. NCBITaxon:9606 +http://example.org/e4188468-9007-526c-b78f-834749707933 owl:NamedIndividual Sst_5 CLM:1001175 A Sst_5 in the Human Brain has the gene markers SH3RF2, NPY, CALB1 with a NS-Forest FBeta value of 0.5248833592534992s. NCBITaxon:9606 +http://example.org/2345151c-05a6-510e-aff6-b4c94f935ad1 owl:NamedIndividual Sst_6 CLM:1001176 A Sst_6 in the Human Brain has the gene markers DPP4, MAFB with a NS-Forest FBeta value of 0.38520801232665647s. NCBITaxon:9606 +http://example.org/b2bc7cc7-0bb7-5787-b777-73507ecc4d1e owl:NamedIndividual Sst_6 CLM:1001176 A Sst_6 in the Human Brain has the gene markers DPP4, MAFB with a NS-Forest FBeta value of 0.38520801232665647s. NCBITaxon:9606 +http://example.org/46a54cdc-c34f-5c18-93c7-8aa4ec900a08 owl:NamedIndividual Sst_7 CLM:1001177 A Sst_7 in the Human Brain has the gene markers EPSTI1, PIEZO2, HPSE2, PLCH1 with a NS-Forest FBeta value of 0.4469696969696969s. NCBITaxon:9606 +http://example.org/e6363434-6e93-5d89-8bb3-852e6c93581f owl:NamedIndividual Sst_7 CLM:1001177 A Sst_7 in the Human Brain has the gene markers EPSTI1, PIEZO2, HPSE2, PLCH1 with a NS-Forest FBeta value of 0.4469696969696969s. NCBITaxon:9606 +http://example.org/9dc679f4-af20-5b79-b168-b501bba9aada owl:NamedIndividual Sst_8 CLM:1001178 A Sst_8 in the Human Brain has the gene markers STK32A, SYT9, RELN with a NS-Forest FBeta value of 0.5061619718309859s. NCBITaxon:9606 +http://example.org/8b343b2d-58d7-510e-b8f0-242f0b95dd1d owl:NamedIndividual Sst_8 CLM:1001178 A Sst_8 in the Human Brain has the gene markers STK32A, SYT9, RELN with a NS-Forest FBeta value of 0.5061619718309859s. NCBITaxon:9606 +http://example.org/047da42f-ec9e-51d3-a950-a77de0946fd3 owl:NamedIndividual Sst_9 CLM:1001179 A Sst_9 in the Human Brain has the gene markers MYO10, ARHGAP6, FREM1 with a NS-Forest FBeta value of 0.3506097560975609s. NCBITaxon:9606 +http://example.org/636273dc-62e1-544c-8627-672c58fb8824 owl:NamedIndividual Sst_9 CLM:1001179 A Sst_9 in the Human Brain has the gene markers MYO10, ARHGAP6, FREM1 with a NS-Forest FBeta value of 0.3506097560975609s. NCBITaxon:9606 +http://example.org/6b6867f0-1035-5e42-96e2-814dc660eff8 owl:NamedIndividual Sst_10 CLM:1001180 A Sst_10 in the Human Brain has the gene markers HPSE2, EYA4, SST, PLCH1 with a NS-Forest FBeta value of 0.3615384615384615s. NCBITaxon:9606 +http://example.org/a29aad04-bbf6-503a-bf9f-81caf832b532 owl:NamedIndividual Sst_10 CLM:1001180 A Sst_10 in the Human Brain has the gene markers HPSE2, EYA4, SST, PLCH1 with a NS-Forest FBeta value of 0.3615384615384615s. NCBITaxon:9606 +http://example.org/83659dfd-6c91-5325-9146-3a6162f87688 owl:NamedIndividual Sst_11 CLM:1001181 A Sst_11 in the Human Brain has the gene markers ADGRG6, PROM1, SYT9 with a NS-Forest FBeta value of 0.34898477157360397s. NCBITaxon:9606 +http://example.org/c66cbd73-64c2-58a7-b8b2-4a9f178fe918 owl:NamedIndividual Sst_11 CLM:1001181 A Sst_11 in the Human Brain has the gene markers ADGRG6, PROM1, SYT9 with a NS-Forest FBeta value of 0.34898477157360397s. NCBITaxon:9606 +http://example.org/fff6bb7f-da2d-5371-981c-bb398c4140d3 owl:NamedIndividual Sst_12 CLM:1001182 A Sst_12 in the Human Brain has the gene markers CBLN4, SLC24A4, EYS, PLCH1 with a NS-Forest FBeta value of 0.34348441926345613s. NCBITaxon:9606 +http://example.org/c220880e-2a72-5069-9f2d-1df0b4c842b4 owl:NamedIndividual Sst_12 CLM:1001182 A Sst_12 in the Human Brain has the gene markers CBLN4, SLC24A4, EYS, PLCH1 with a NS-Forest FBeta value of 0.34348441926345613s. NCBITaxon:9606 +http://example.org/71b542b7-a06f-52ce-8c0e-cd661ed3582a owl:NamedIndividual Sst_13 CLM:1001183 A Sst_13 in the Human Brain has the gene markers FBN2, TRPC6, EPB41L4A with a NS-Forest FBeta value of 0.5461876832844575s. NCBITaxon:9606 +http://example.org/ad469582-bf00-57e8-bbb3-c4e209767774 owl:NamedIndividual Sst_13 CLM:1001183 A Sst_13 in the Human Brain has the gene markers FBN2, TRPC6, EPB41L4A with a NS-Forest FBeta value of 0.5461876832844575s. NCBITaxon:9606 +http://example.org/1038574c-cdb3-55f3-8a2e-9667a0f276f8 owl:NamedIndividual Sst_14 CLM:1001184 A Sst_14 in the Human Brain has the gene markers SLC9A2, ROR1, EYA4 with a NS-Forest FBeta value of 0.46314741035856577s. NCBITaxon:9606 +http://example.org/c6a0df81-e8d0-5a72-8d68-98ceaefb7037 owl:NamedIndividual Sst_14 CLM:1001184 A Sst_14 in the Human Brain has the gene markers SLC9A2, ROR1, EYA4 with a NS-Forest FBeta value of 0.46314741035856577s. NCBITaxon:9606 +http://example.org/7a59e428-c910-56f6-8203-80543e9edf59 owl:NamedIndividual Sst_15 CLM:1001185 A Sst_15 in the Human Brain has the gene markers DPP4, EPB41L4A, FREM1, PLCH1 with a NS-Forest FBeta value of 0.45995670995671s. NCBITaxon:9606 +http://example.org/59a468ac-c3c6-54db-a942-fa81bbdb0761 owl:NamedIndividual Sst_15 CLM:1001185 A Sst_15 in the Human Brain has the gene markers DPP4, EPB41L4A, FREM1, PLCH1 with a NS-Forest FBeta value of 0.45995670995671s. NCBITaxon:9606 +http://example.org/1bcf4ddb-22fe-5ec7-ba66-4545beb7fb34 owl:NamedIndividual Sst_16 CLM:1001186 A Sst_16 in the Human Brain has the gene markers LINC01630, DACH1, VAV3 with a NS-Forest FBeta value of 0.6000000000000001s. NCBITaxon:9606 +http://example.org/3d72dcc5-7f86-548f-8fdc-44923f674594 owl:NamedIndividual Sst_16 CLM:1001186 A Sst_16 in the Human Brain has the gene markers LINC01630, DACH1, VAV3 with a NS-Forest FBeta value of 0.6000000000000001s. NCBITaxon:9606 +http://example.org/bf895c5d-205a-5ff1-a7af-c35981907bb8 owl:NamedIndividual Sst_17 CLM:1001187 A Sst_17 in the Human Brain has the gene markers PROM1, EYA2, PLCH1 with a NS-Forest FBeta value of 0.40226063829787234s. NCBITaxon:9606 +http://example.org/5619b281-8a1c-5775-94ec-f177850fee5f owl:NamedIndividual Sst_17 CLM:1001187 A Sst_17 in the Human Brain has the gene markers PROM1, EYA2, PLCH1 with a NS-Forest FBeta value of 0.40226063829787234s. NCBITaxon:9606 +http://example.org/d5953578-cdfb-51d6-a7d7-b32758ac4a09 owl:NamedIndividual Sst_18 CLM:1001188 A Sst_18 in the Human Brain has the gene markers ENOX2, PNOC, SST, RELN with a NS-Forest FBeta value of 0.34307875894988066s. NCBITaxon:9606 +http://example.org/0c7342b5-0db3-5118-a85d-17b6ae1932ff owl:NamedIndividual Sst_18 CLM:1001188 A Sst_18 in the Human Brain has the gene markers ENOX2, PNOC, SST, RELN with a NS-Forest FBeta value of 0.34307875894988066s. NCBITaxon:9606 +http://example.org/79987796-35a9-594c-a55b-53eb2cf3cb89 owl:NamedIndividual Sst_19 CLM:1001189 A Sst_19 in the Human Brain has the gene markers EPB41L4A, GPC5, PLCH1 with a NS-Forest FBeta value of 0.7339449541284404s. NCBITaxon:9606 +http://example.org/b75080ab-5913-59be-9455-35fe943bf334 owl:NamedIndividual Sst_19 CLM:1001189 A Sst_19 in the Human Brain has the gene markers EPB41L4A, GPC5, PLCH1 with a NS-Forest FBeta value of 0.7339449541284404s. NCBITaxon:9606 +http://example.org/143b6349-3e1b-565a-9da2-895a8fb437e0 owl:NamedIndividual Sst_20 CLM:1001190 A Sst_20 in the Human Brain has the gene markers QRFPR, HGF, RELN with a NS-Forest FBeta value of 0.4671717171717172s. NCBITaxon:9606 +http://example.org/6b375195-f489-5039-8527-fa4343cd3c4a owl:NamedIndividual Sst_20 CLM:1001190 A Sst_20 in the Human Brain has the gene markers QRFPR, HGF, RELN with a NS-Forest FBeta value of 0.4671717171717172s. NCBITaxon:9606 +http://example.org/7e12ff9d-57ac-5b39-927d-7aa87fa6abf3 owl:NamedIndividual Sst_21 CLM:1001191 A Sst_21 in the Human Brain has the gene markers ANGPT1, FBN2, COL24A1 with a NS-Forest FBeta value of 0.48315602836879434s. NCBITaxon:9606 +http://example.org/3828d162-ba43-5b08-8c40-8a1e55a13b5b owl:NamedIndividual Sst_21 CLM:1001191 A Sst_21 in the Human Brain has the gene markers ANGPT1, FBN2, COL24A1 with a NS-Forest FBeta value of 0.48315602836879434s. NCBITaxon:9606 +http://example.org/450fc9f5-7471-5453-823d-943abd34688f owl:NamedIndividual Sst_22 CLM:1001192 A Sst_22 in the Human Brain has the gene markers EPB41L4A, ITGA8, SST with a NS-Forest FBeta value of 0.4351032448377581s. NCBITaxon:9606 +http://example.org/e52b9e49-7c8b-5d77-a2dd-255b2bea3ea7 owl:NamedIndividual Sst_22 CLM:1001192 A Sst_22 in the Human Brain has the gene markers EPB41L4A, ITGA8, SST with a NS-Forest FBeta value of 0.4351032448377581s. NCBITaxon:9606 +http://example.org/797f9d9e-d706-59b9-bccc-ecd1dc1f2c6d owl:NamedIndividual Sst_23 CLM:1001193 A Sst_23 in the Human Brain has the gene markers NIBAN1, PROM1, THSD7B with a NS-Forest FBeta value of 0.6134686346863469s. NCBITaxon:9606 +http://example.org/afb693d9-efb6-5703-923c-d9e46a3c1f76 owl:NamedIndividual Sst_23 CLM:1001193 A Sst_23 in the Human Brain has the gene markers NIBAN1, PROM1, THSD7B with a NS-Forest FBeta value of 0.6134686346863469s. NCBITaxon:9606 +http://example.org/ce55a1d4-8506-5fd9-9e8f-b93318f31545 owl:NamedIndividual Sst_24 CLM:1001194 A Sst_24 in the Human Brain has the gene markers NDST4, BMP6, MYO5B with a NS-Forest FBeta value of 0.37790697674418605s. NCBITaxon:9606 +http://example.org/ef5f2707-c50d-5da2-910c-55c1a4f67433 owl:NamedIndividual Sst_24 CLM:1001194 A Sst_24 in the Human Brain has the gene markers NDST4, BMP6, MYO5B with a NS-Forest FBeta value of 0.37790697674418605s. NCBITaxon:9606 +http://example.org/1a215a06-94aa-5ad6-b593-efd1afe46938 owl:NamedIndividual Sst_25 CLM:1001195 A Sst_25 in the Human Brain has the gene markers BLM, CALB1, STK32B with a NS-Forest FBeta value of 0.45689655172413796s. NCBITaxon:9606 +http://example.org/d0fd407c-f703-5334-8419-0b901c899564 owl:NamedIndividual Sst_25 CLM:1001195 A Sst_25 in the Human Brain has the gene markers BLM, CALB1, STK32B with a NS-Forest FBeta value of 0.45689655172413796s. NCBITaxon:9606 +http://example.org/391ffeff-5536-5336-9be8-af5cac96c5ad owl:NamedIndividual Sst_26 CLM:1001196 A Sst_26 in the Human Brain has the gene markers MME, FBN2, MCUB with a NS-Forest FBeta value of 0.2326233183856502s. NCBITaxon:9606 +http://example.org/6f34892a-4c29-5b8c-9d8c-3364a66ed435 owl:NamedIndividual Sst_26 CLM:1001196 A Sst_26 in the Human Brain has the gene markers MME, FBN2, MCUB with a NS-Forest FBeta value of 0.2326233183856502s. NCBITaxon:9606 +http://example.org/32d707b4-cc3e-5c76-86f5-594f63806004 owl:NamedIndividual Sst_27 CLM:1001197 A Sst_27 in the Human Brain has the gene markers EDNRA, MT-ND5, FREM1, SST with a NS-Forest FBeta value of 0.39168937329700276s. NCBITaxon:9606 +http://example.org/80c0a03d-2a1a-5f6b-8e19-e2697783fe9d owl:NamedIndividual Sst_27 CLM:1001197 A Sst_27 in the Human Brain has the gene markers EDNRA, MT-ND5, FREM1, SST with a NS-Forest FBeta value of 0.39168937329700276s. NCBITaxon:9606 +http://example.org/2dedc8b5-f654-5e99-9bd5-4f678f283795 owl:NamedIndividual Sst_28 CLM:1001198 A Sst_28 in the Human Brain has the gene markers PROM1, NDST4, TRPC6 with a NS-Forest FBeta value of 0.5884615384615385s. NCBITaxon:9606 +http://example.org/eb19c81d-5518-5313-bd59-c261e11e9122 owl:NamedIndividual Sst_28 CLM:1001198 A Sst_28 in the Human Brain has the gene markers PROM1, NDST4, TRPC6 with a NS-Forest FBeta value of 0.5884615384615385s. NCBITaxon:9606 +http://example.org/d4b92a78-d00c-5ca0-84f5-e391741dfb8d owl:NamedIndividual Sst_29 CLM:1001199 A Sst_29 in the Human Brain has the gene markers ENPP1, QRFPR, PIEZO2 with a NS-Forest FBeta value of 0.41353383458646614s. NCBITaxon:9606 +http://example.org/96b2a9c8-a39a-5bc9-bc60-cf34b48ef63e owl:NamedIndividual Sst_29 CLM:1001199 A Sst_29 in the Human Brain has the gene markers ENPP1, QRFPR, PIEZO2 with a NS-Forest FBeta value of 0.41353383458646614s. NCBITaxon:9606 +http://example.org/e4bfff20-3913-5c68-b3d2-facd70233707 owl:NamedIndividual Sst_30 CLM:1001200 A Sst_30 in the Human Brain has the gene markers NOTCH2, HTR2C, FBN2 with a NS-Forest FBeta value of 0.4063786008230453s. NCBITaxon:9606 +http://example.org/815933f9-fbec-5177-8963-c58279eaffc8 owl:NamedIndividual Sst_30 CLM:1001200 A Sst_30 in the Human Brain has the gene markers NOTCH2, HTR2C, FBN2 with a NS-Forest FBeta value of 0.4063786008230453s. NCBITaxon:9606 +http://example.org/7d1acf27-32b8-59e8-897c-4430648680b5 owl:NamedIndividual Sst_31 CLM:1001201 A Sst_31 in the Human Brain has the gene markers FRZB, CBLN4, RGS5_ENSG00000143248, ARHGAP10 with a NS-Forest FBeta value of 0.4743083003952569s. NCBITaxon:9606 +http://example.org/d4ec6322-15c9-5fc1-a349-ddaf197bd5d8 owl:NamedIndividual Sst_31 CLM:1001201 A Sst_31 in the Human Brain has the gene markers FRZB, CBLN4, RGS5_ENSG00000143248, ARHGAP10 with a NS-Forest FBeta value of 0.4743083003952569s. NCBITaxon:9606 +http://example.org/dafae1b1-e6e8-5c32-80fb-74144a827dee owl:NamedIndividual Sst_32 CLM:1001202 A Sst_32 in the Human Brain has the gene markers HPGD, PENK, EYA2 with a NS-Forest FBeta value of 0.40567282321899734s. NCBITaxon:9606 +http://example.org/f8eaa8fd-02bf-5938-8c56-ee74f33fdd0a owl:NamedIndividual Sst_32 CLM:1001202 A Sst_32 in the Human Brain has the gene markers HPGD, PENK, EYA2 with a NS-Forest FBeta value of 0.40567282321899734s. NCBITaxon:9606 +http://example.org/34b3e59a-53c2-51a5-9e27-c8ae9bd86b78 owl:NamedIndividual Sst_33 CLM:1001203 A Sst_33 in the Human Brain has the gene markers CRYBG3, BMP6, HTR2C with a NS-Forest FBeta value of 0.39086687306501544s. NCBITaxon:9606 +http://example.org/131eb56d-8e78-5931-a6d7-022aac5d8b6a owl:NamedIndividual Sst_33 CLM:1001203 A Sst_33 in the Human Brain has the gene markers CRYBG3, BMP6, HTR2C with a NS-Forest FBeta value of 0.39086687306501544s. NCBITaxon:9606 +http://example.org/8e12490d-1b11-5355-8f62-826630f11024 owl:NamedIndividual Sst_34 CLM:1001204 A Sst_34 in the Human Brain has the gene markers TTC29, TCF7L1 with a NS-Forest FBeta value of 0.565749235474006s. NCBITaxon:9606 +http://example.org/5c09b5f6-7457-5662-bb6a-513e627a3cb3 owl:NamedIndividual Sst_34 CLM:1001204 A Sst_34 in the Human Brain has the gene markers TTC29, TCF7L1 with a NS-Forest FBeta value of 0.565749235474006s. NCBITaxon:9606 +http://example.org/68d9d04b-3a34-50c9-a127-dfd92c029121 owl:NamedIndividual Sst_35 CLM:1001205 A Sst_35 in the Human Brain has the gene markers ACVR1C, EYA2, TRIM67 with a NS-Forest FBeta value of 0.5226480836236933s. NCBITaxon:9606 +http://example.org/b5a08c20-6c1e-5799-95dc-7c67595b375e owl:NamedIndividual Sst_35 CLM:1001205 A Sst_35 in the Human Brain has the gene markers ACVR1C, EYA2, TRIM67 with a NS-Forest FBeta value of 0.5226480836236933s. NCBITaxon:9606 +http://example.org/f17e7ae2-a36c-53cf-9073-38e299846def owl:NamedIndividual Sst_36 CLM:1001206 A Sst_36 in the Human Brain has the gene markers TRDN, ITGA1, PARD3B, PLCH1 with a NS-Forest FBeta value of 0.6381381381381382s. NCBITaxon:9606 +http://example.org/e3ae895c-234b-5acb-8098-3be1f2547bdc owl:NamedIndividual Sst_36 CLM:1001206 A Sst_36 in the Human Brain has the gene markers TRDN, ITGA1, PARD3B, PLCH1 with a NS-Forest FBeta value of 0.6381381381381382s. NCBITaxon:9606 +http://example.org/ca1bca49-71ac-52f4-9696-d732b5a7bdda owl:NamedIndividual Sst_37 CLM:1001207 A Sst_37 in the Human Brain has the gene markers PROM1, CRHBP, SST with a NS-Forest FBeta value of 0.5s. NCBITaxon:9606 +http://example.org/86c7ec43-72ff-59f4-ac18-fa41ae2ec2aa owl:NamedIndividual Sst_37 CLM:1001207 A Sst_37 in the Human Brain has the gene markers PROM1, CRHBP, SST with a NS-Forest FBeta value of 0.5s. NCBITaxon:9606 +http://example.org/8577fcc8-5cc5-5f56-b51f-352b04c39651 owl:NamedIndividual VLMC_1 CLM:1001208 A VLMC_1 in the Human Brain has the gene markers TAGLN, ACTA2 with a NS-Forest FBeta value of 0.8559498956158662s. NCBITaxon:9606 +http://example.org/e7436099-04f1-5cdb-adc7-634d07537c7b owl:NamedIndividual VLMC_1 CLM:1001208 A VLMC_1 in the Human Brain has the gene markers TAGLN, ACTA2 with a NS-Forest FBeta value of 0.8559498956158662s. NCBITaxon:9606 +http://example.org/da5fd9ef-c68a-5af2-9262-7a622fc4e53f owl:NamedIndividual VLMC_2 CLM:1001209 A VLMC_2 in the Human Brain has the gene markers SLC19A1, COLEC12 with a NS-Forest FBeta value of 0.876753507014028s. NCBITaxon:9606 +http://example.org/50b158f1-f8d1-5702-b142-f44c5ee18e06 owl:NamedIndividual VLMC_2 CLM:1001209 A VLMC_2 in the Human Brain has the gene markers SLC19A1, COLEC12 with a NS-Forest FBeta value of 0.876753507014028s. NCBITaxon:9606 +http://example.org/b40922b1-3c80-5b08-bdf0-ec9c2b2e23bd owl:NamedIndividual Vip_1 CLM:1001210 A Vip_1 in the Human Brain has the gene markers FLT1, LRRC1, SHISA8 with a NS-Forest FBeta value of 0.400763358778626s. NCBITaxon:9606 +http://example.org/424c81ed-0299-5063-8215-628aaf9a2cfa owl:NamedIndividual Vip_1 CLM:1001210 A Vip_1 in the Human Brain has the gene markers FLT1, LRRC1, SHISA8 with a NS-Forest FBeta value of 0.400763358778626s. NCBITaxon:9606 +http://example.org/c22f7e92-116a-54b8-87f9-b64c3c5a8498 owl:NamedIndividual Vip_2 CLM:1001211 A Vip_2 in the Human Brain has the gene markers IGFBP5, SLC22A3, PTGDS, VIP with a NS-Forest FBeta value of 0.4741379310344827s. NCBITaxon:9606 +http://example.org/20ce6348-6659-527a-92b3-c9558d84770e owl:NamedIndividual Vip_2 CLM:1001211 A Vip_2 in the Human Brain has the gene markers IGFBP5, SLC22A3, PTGDS, VIP with a NS-Forest FBeta value of 0.4741379310344827s. NCBITaxon:9606 +http://example.org/d7a47e62-a10b-5e77-a89f-29495a99af36 owl:NamedIndividual Vip_3 CLM:1001212 A Vip_3 in the Human Brain has the gene markers HPSE2, TRPC6, VIP with a NS-Forest FBeta value of 0.40249999999999997s. NCBITaxon:9606 +http://example.org/efad084b-98ab-540f-9bb9-53daaaf32c4e owl:NamedIndividual Vip_3 CLM:1001212 A Vip_3 in the Human Brain has the gene markers HPSE2, TRPC6, VIP with a NS-Forest FBeta value of 0.40249999999999997s. NCBITaxon:9606 +http://example.org/77c19f58-4076-5447-99c6-5e0290bca684 owl:NamedIndividual Vip_4 CLM:1001213 A Vip_4 in the Human Brain has the gene markers WNT5A, ABI3BP, VCAN with a NS-Forest FBeta value of 0.546875s. NCBITaxon:9606 +http://example.org/5eb56099-d3c8-5678-80cd-8eb3a98d9785 owl:NamedIndividual Vip_4 CLM:1001213 A Vip_4 in the Human Brain has the gene markers WNT5A, ABI3BP, VCAN with a NS-Forest FBeta value of 0.546875s. NCBITaxon:9606 +http://example.org/97c5f6f6-25ef-532d-8f94-5411640d341b owl:NamedIndividual Vip_5 CLM:1001214 A Vip_5 in the Human Brain has the gene markers LINC01630, IQGAP2, THSD4 with a NS-Forest FBeta value of 0.4801324503311257s. NCBITaxon:9606 +http://example.org/b455cd88-5f0b-5fd0-9c97-fb495896b8c4 owl:NamedIndividual Vip_5 CLM:1001214 A Vip_5 in the Human Brain has the gene markers LINC01630, IQGAP2, THSD4 with a NS-Forest FBeta value of 0.4801324503311257s. NCBITaxon:9606 +http://example.org/919265db-1edb-5a32-b22d-11ab03b7ad92 owl:NamedIndividual Vip_6 CLM:1001215 A Vip_6 in the Human Brain has the gene markers SMOC1, IQGAP2, PARD3B with a NS-Forest FBeta value of 0.5082179930795848s. NCBITaxon:9606 +http://example.org/3ec9bd09-bdc7-5380-9786-be1dd067f4df owl:NamedIndividual Vip_6 CLM:1001215 A Vip_6 in the Human Brain has the gene markers SMOC1, IQGAP2, PARD3B with a NS-Forest FBeta value of 0.5082179930795848s. NCBITaxon:9606 +http://example.org/170fd7f9-f673-5cd0-a423-cc58a1e5f3e1 owl:NamedIndividual Vip_7 CLM:1001216 A Vip_7 in the Human Brain has the gene markers CCN2, PCDH18, SEMA3C, HPSE2 with a NS-Forest FBeta value of 0.40059347181008903s. NCBITaxon:9606 +http://example.org/8e3f84eb-0476-5d23-bcac-d17088fe8131 owl:NamedIndividual Vip_7 CLM:1001216 A Vip_7 in the Human Brain has the gene markers CCN2, PCDH18, SEMA3C, HPSE2 with a NS-Forest FBeta value of 0.40059347181008903s. NCBITaxon:9606 +http://example.org/453505f4-5e04-5177-9ccf-a090201c377f owl:NamedIndividual Vip_8 CLM:1001217 A Vip_8 in the Human Brain has the gene markers VWDE, WSCD1, DACH2 with a NS-Forest FBeta value of 0.3183962264150943s. NCBITaxon:9606 +http://example.org/80b0265f-4383-55ac-9c1d-73b35f00741e owl:NamedIndividual Vip_8 CLM:1001217 A Vip_8 in the Human Brain has the gene markers VWDE, WSCD1, DACH2 with a NS-Forest FBeta value of 0.3183962264150943s. NCBITaxon:9606 +http://example.org/2cf8de9a-248c-5795-96f2-6c2606c85559 owl:NamedIndividual Vip_9 CLM:1001218 A Vip_9 in the Human Brain has the gene markers SLC7A11, TNS3, PPP1R1C, COBLL1 with a NS-Forest FBeta value of 0.48302107728337235s. NCBITaxon:9606 +http://example.org/2df41bbe-51b9-5ce9-b1b9-fc129d724f65 owl:NamedIndividual Vip_9 CLM:1001218 A Vip_9 in the Human Brain has the gene markers SLC7A11, TNS3, PPP1R1C, COBLL1 with a NS-Forest FBeta value of 0.48302107728337235s. NCBITaxon:9606 +http://example.org/bebd3322-06a0-562b-8718-bd62fd168ef1 owl:NamedIndividual Vip_10 CLM:1001219 A Vip_10 in the Human Brain has the gene markers ABI3BP, KCNG2, PARD3B with a NS-Forest FBeta value of 0.5405405405405405s. NCBITaxon:9606 +http://example.org/33838354-d83a-5e9c-acd3-849a542fe7cb owl:NamedIndividual Vip_10 CLM:1001219 A Vip_10 in the Human Brain has the gene markers ABI3BP, KCNG2, PARD3B with a NS-Forest FBeta value of 0.5405405405405405s. NCBITaxon:9606 +http://example.org/76d9674d-944d-50dc-bbcc-1b22a543b0aa owl:NamedIndividual Vip_11 CLM:1001220 A Vip_11 in the Human Brain has the gene markers ABI3BP, MCTP2, SLC22A3, PROS1 with a NS-Forest FBeta value of 0.43523676880222845s. NCBITaxon:9606 +http://example.org/ffb69102-f8f2-59a7-b585-a26138c298b5 owl:NamedIndividual Vip_11 CLM:1001220 A Vip_11 in the Human Brain has the gene markers ABI3BP, MCTP2, SLC22A3, PROS1 with a NS-Forest FBeta value of 0.43523676880222845s. NCBITaxon:9606 +http://example.org/9db4af56-a03e-55e4-9cc4-eba9ae7a57bd owl:NamedIndividual Vip_12 CLM:1001221 A Vip_12 in the Human Brain has the gene markers SLC7A11, HCRTR2, EPS8 with a NS-Forest FBeta value of 0.5889057750759878s. NCBITaxon:9606 +http://example.org/59c956ae-d2cb-52f1-ba04-644542b2a326 owl:NamedIndividual Vip_12 CLM:1001221 A Vip_12 in the Human Brain has the gene markers SLC7A11, HCRTR2, EPS8 with a NS-Forest FBeta value of 0.5889057750759878s. NCBITaxon:9606 +http://example.org/5aa178b7-96f6-53fb-9cf5-8eb305a670a4 owl:NamedIndividual Vip_13 CLM:1001222 A Vip_13 in the Human Brain has the gene markers ST18, PTGDS, VIP with a NS-Forest FBeta value of 0.42776639344262285s. NCBITaxon:9606 +http://example.org/fa3519de-625e-58ad-8090-47ecd59e4c78 owl:NamedIndividual Vip_13 CLM:1001222 A Vip_13 in the Human Brain has the gene markers ST18, PTGDS, VIP with a NS-Forest FBeta value of 0.42776639344262285s. NCBITaxon:9606 +http://example.org/f40cee6f-ddb4-590e-ba32-c8508cb1dc3b owl:NamedIndividual Vip_14 CLM:1001223 A Vip_14 in the Human Brain has the gene markers ST18, KCNH8, CA10, VIP with a NS-Forest FBeta value of 0.5968468468468467s. NCBITaxon:9606 +http://example.org/777ac0fb-91c3-539f-8ab0-f8aba500e975 owl:NamedIndividual Vip_14 CLM:1001223 A Vip_14 in the Human Brain has the gene markers ST18, KCNH8, CA10, VIP with a NS-Forest FBeta value of 0.5968468468468467s. NCBITaxon:9606 +http://example.org/7993342c-f5a1-5ad5-91c4-2a945c5d3742 owl:NamedIndividual Vip_15 CLM:1001224 A Vip_15 in the Human Brain has the gene markers SVIL, VIP with a NS-Forest FBeta value of 0.6172360248447205s. NCBITaxon:9606 +http://example.org/72700095-dab0-5b58-894c-97a7a65b8963 owl:NamedIndividual Vip_15 CLM:1001224 A Vip_15 in the Human Brain has the gene markers SVIL, VIP with a NS-Forest FBeta value of 0.6172360248447205s. NCBITaxon:9606 +http://example.org/4c067fa8-8fe3-5d6f-b590-c83d41198ec5 owl:NamedIndividual Vip_16 CLM:1001225 A Vip_16 in the Human Brain has the gene markers NDST4, SEMA3C, HTR2C, VIP with a NS-Forest FBeta value of 0.38s. NCBITaxon:9606 +http://example.org/031bb4ce-7a74-5c7c-be97-388b3d1545fe owl:NamedIndividual Vip_16 CLM:1001225 A Vip_16 in the Human Brain has the gene markers NDST4, SEMA3C, HTR2C, VIP with a NS-Forest FBeta value of 0.38s. NCBITaxon:9606 +http://example.org/a1634a4e-feed-54bd-9895-20c205e654b9 owl:NamedIndividual Vip_17 CLM:1001226 A Vip_17 in the Human Brain has the gene markers PENK, PARD3B with a NS-Forest FBeta value of 0.6040502793296089s. NCBITaxon:9606 +http://example.org/a4433a13-b5ab-589f-bd64-f85f1a0d2e1e owl:NamedIndividual Vip_17 CLM:1001226 A Vip_17 in the Human Brain has the gene markers PENK, PARD3B with a NS-Forest FBeta value of 0.6040502793296089s. NCBITaxon:9606 +http://example.org/90e235f5-735a-524f-bfb4-20caf4f6d4f4 owl:NamedIndividual Vip_18 CLM:1001227 A Vip_18 in the Human Brain has the gene markers NOX4, RXRG, NDST4 with a NS-Forest FBeta value of 0.38953488372093026s. NCBITaxon:9606 +http://example.org/00c3e6b7-1fe8-57ee-b890-21c050a3d411 owl:NamedIndividual Vip_18 CLM:1001227 A Vip_18 in the Human Brain has the gene markers NOX4, RXRG, NDST4 with a NS-Forest FBeta value of 0.38953488372093026s. NCBITaxon:9606 +http://example.org/aacb5317-93b8-52da-864c-d55fd8dafbe9 owl:NamedIndividual Vip_19 CLM:1001228 A Vip_19 in the Human Brain has the gene markers CBLN1, HTR2C, VIP with a NS-Forest FBeta value of 0.5353075170842825s. NCBITaxon:9606 +http://example.org/94265f82-0c6d-5fb0-a8cf-ed8d99d6ac55 owl:NamedIndividual Vip_19 CLM:1001228 A Vip_19 in the Human Brain has the gene markers CBLN1, HTR2C, VIP with a NS-Forest FBeta value of 0.5353075170842825s. NCBITaxon:9606 +http://example.org/36a0c118-b61d-58ea-bb05-af465c70a750 owl:NamedIndividual Vip_20 CLM:1001229 A Vip_20 in the Human Brain has the gene markers CBLN1, VIPR2, PPP1R1C, VIP with a NS-Forest FBeta value of 0.3658536585365853s. NCBITaxon:9606 +http://example.org/d528c703-7cd7-5692-bdd2-4fe8650f73ee owl:NamedIndividual Vip_20 CLM:1001229 A Vip_20 in the Human Brain has the gene markers CBLN1, VIPR2, PPP1R1C, VIP with a NS-Forest FBeta value of 0.3658536585365853s. NCBITaxon:9606 +http://example.org/dc7538c4-8653-56d0-ba33-d27accf78c6e owl:NamedIndividual Vip_21 CLM:1001230 A Vip_21 in the Human Brain has the gene markers ALDH1A2, ROR2 with a NS-Forest FBeta value of 0.6180811808118081s. NCBITaxon:9606 +http://example.org/a0836c38-f6fa-5092-b659-68bbe4745232 owl:NamedIndividual Vip_21 CLM:1001230 A Vip_21 in the Human Brain has the gene markers ALDH1A2, ROR2 with a NS-Forest FBeta value of 0.6180811808118081s. NCBITaxon:9606 +http://example.org/1e2336d0-d9e4-521d-afc2-09d4115526fa owl:NamedIndividual Vip_22 CLM:1001231 A Vip_22 in the Human Brain has the gene markers ABI3BP, SLC7A11, EDNRA with a NS-Forest FBeta value of 0.5279126213592233s. NCBITaxon:9606 +http://example.org/cd3ebad5-bfb5-5a64-9a11-1d51f5873544 owl:NamedIndividual Vip_22 CLM:1001231 A Vip_22 in the Human Brain has the gene markers ABI3BP, SLC7A11, EDNRA with a NS-Forest FBeta value of 0.5279126213592233s. NCBITaxon:9606 +http://example.org/59badafe-41af-5657-a882-26529506fa0d owl:NamedIndividual Vip_23 CLM:1001232 A Vip_23 in the Human Brain has the gene markers KCNH8, EDNRA, KMO with a NS-Forest FBeta value of 0.54251269035533s. NCBITaxon:9606 +http://example.org/240b8e84-9ef7-52de-aa94-ae81ba74bfec owl:NamedIndividual Vip_23 CLM:1001232 A Vip_23 in the Human Brain has the gene markers KCNH8, EDNRA, KMO with a NS-Forest FBeta value of 0.54251269035533s. NCBITaxon:9606 +http://example.org/b64863d2-ee8c-5668-bdda-2bebbe671005 owl:NamedIndividual Vip_24 CLM:1001233 A Vip_24 in the Human Brain has the gene markers LYPD1, ENHO, CHRNA2 with a NS-Forest FBeta value of 0.36276223776223776s. NCBITaxon:9606 +http://example.org/85ae9809-473f-5b1a-aa06-3783cd8e03a5 owl:NamedIndividual Vip_24 CLM:1001233 A Vip_24 in the Human Brain has the gene markers LYPD1, ENHO, CHRNA2 with a NS-Forest FBeta value of 0.36276223776223776s. NCBITaxon:9606 +http://example.org/1d48b629-c05d-5cbc-9c9f-60525a98cdc5 owl:NamedIndividual Vip_25 CLM:1001234 A Vip_25 in the Human Brain has the gene markers NOX4, IQGAP2, CBLN4 with a NS-Forest FBeta value of 0.5275229357798166s. NCBITaxon:9606 +http://example.org/37e10059-310a-5ec3-b255-324d152608aa owl:NamedIndividual Vip_25 CLM:1001234 A Vip_25 in the Human Brain has the gene markers NOX4, IQGAP2, CBLN4 with a NS-Forest FBeta value of 0.5275229357798166s. NCBITaxon:9606 +http://example.org/7e108f73-253d-5ab2-a065-876d5de092ac owl:NamedIndividual Vip_26 CLM:1001235 A Vip_26 in the Human Brain has the gene markers SEMA3C, LINC01630, HPSE2, TAC3 with a NS-Forest FBeta value of 0.5947955390334573s. NCBITaxon:9606 +http://example.org/ad6581ea-42a7-5bc4-b752-1fd804139e10 owl:NamedIndividual Vip_26 CLM:1001235 A Vip_26 in the Human Brain has the gene markers SEMA3C, LINC01630, HPSE2, TAC3 with a NS-Forest FBeta value of 0.5947955390334573s. NCBITaxon:9606 +http://example.org/fe441b57-f2bd-5134-a6b5-d513e3cfc7bc owl:NamedIndividual Vip_27 CLM:1001236 A Vip_27 in the Human Brain has the gene markers DACH2, CHRNA7, MIR4500HG, VIP with a NS-Forest FBeta value of 0.5466778805719091s. NCBITaxon:9606 +http://example.org/7b911472-5ec7-52e1-9c8a-3f889daddaff owl:NamedIndividual Vip_27 CLM:1001236 A Vip_27 in the Human Brain has the gene markers DACH2, CHRNA7, MIR4500HG, VIP with a NS-Forest FBeta value of 0.5466778805719091s. NCBITaxon:9606 +http://example.org/bb029bd8-9263-58f3-b456-899d9cfe8bf3 owl:NamedIndividual Vip_28 CLM:1001237 A Vip_28 in the Human Brain has the gene markers HTR2C, DCN with a NS-Forest FBeta value of 0.3763440860215054s. NCBITaxon:9606 +http://example.org/45155d8a-9f26-56b9-8db9-644a7e854110 owl:NamedIndividual Vip_28 CLM:1001237 A Vip_28 in the Human Brain has the gene markers HTR2C, DCN with a NS-Forest FBeta value of 0.3763440860215054s. NCBITaxon:9606 +http://example.org/0fa5c018-22a3-5525-900a-3451e5108cc2 owl:NamedIndividual Vip_29 CLM:1001238 A Vip_29 in the Human Brain has the gene markers IQGAP2, KCNJ2, TAC1, MYO5B, VIP with a NS-Forest FBeta value of 0.49180327868852464s. NCBITaxon:9606 +http://example.org/713d5c24-5c16-5d44-9c97-630728ef7dea owl:NamedIndividual Vip_29 CLM:1001238 A Vip_29 in the Human Brain has the gene markers IQGAP2, KCNJ2, TAC1, MYO5B, VIP with a NS-Forest FBeta value of 0.49180327868852464s. NCBITaxon:9606