Commit
This commit does not belong to any branch on this repository, and may belong to a fork outside of the repository.
Clarified Selecting the representative read documentation
A user queried the use of quality in which read is kept upon deduplication (#261) > your selection procedure does not seem to take into > account read sequencing quality (only mapping quality). > > In other words, if 2 reads have the same high score > mapping quality (i.e. unique mappers), one being long and > with good base scores, the other short with errors, it will > select randomly among these, too, right? The response was: > Yes, that's correct. Updated umi-tools/dedup.py "Selecting the representative read" comment section to clarify that the read quality is not used.
- Loading branch information