diff --git a/CHANGELOG.md b/CHANGELOG.md index 7bfb9d3..344d7af 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -1,6 +1,8 @@ ## RENEE development version + - Fix: RNA report bug, caused by hard-coding of PC1-3, when only PC1-2 were generated (#104, @slsevilla) - Minor documentation improvements. (#100, @kelly-sovacool) +- Fix: allow printing the version or help message even if singularity is not in the path. (#110, @kelly-sovacool) ## RENEE 2.5.11 diff --git a/bin/redirect b/bin/redirect index 37ef05f..8f74330 100755 --- a/bin/redirect +++ b/bin/redirect @@ -67,13 +67,4 @@ elif [[ $ISFRCE == true ]];then export PATH="/mnt/projects/CCBR-Pipelines/bin:$PATH" fi -# check if singularity, snakemake are in PATH -for tool in singularity snakemake;do - x=$(type -P $tool) - if [[ -z $x ]]; then # is $x blank - echo "$tool is not it path! Exiting." - exit - fi -done - ${TOOLDIR}/${TOOLNAME} "$@" || true