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marnorm reading in R1 twice #197

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slsevilla opened this issue Mar 8, 2024 · 1 comment · Fixed by #206
Closed

marnorm reading in R1 twice #197

slsevilla opened this issue Mar 8, 2024 · 1 comment · Fixed by #206
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@kelly-sovacool
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bug Something isn't working
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2024-08

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@slsevilla
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Description of the bug

bug in manrom

https://github.com/CCBR/CHAMPAGNE/blob/main/modules/local/manorm/main.nf

Command used and terminal output

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@slsevilla slsevilla added the bug Something isn't working label Mar 8, 2024
@kelly-sovacool
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looks like this should be tagalign1 instead of tagalign2?

CHAMPAGNE/modules/local/manorm/main.nf

Line 21 in d06ce0f

--r1 ${tagalign2} \\

@kelly-sovacool kelly-sovacool self-assigned this Apr 24, 2024
@kelly-sovacool kelly-sovacool added this to the 2024-07 milestone Jul 8, 2024
@kelly-sovacool kelly-sovacool modified the milestones: 2024-07, 2024-08 Aug 23, 2024
kelly-sovacool added a commit that referenced this issue Aug 23, 2024
@kelly-sovacool
fix: manorm used tagalign2 twice
974edd9 
fixes #197
@kelly-sovacool kelly-sovacool mentioned this issue Aug 26, 2024
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fix: manorm used tagalign2 twice CCBR/CHAMPAGNE
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@kelly-sovacool @slsevilla