From 325d40b34b77d156efacc894c37b2e241a1cfb80 Mon Sep 17 00:00:00 2001
From: Tiago Silva <tiagosilva@Tiagos-MBP-2.hsd1.fl.comcast.net>
Date: Fri, 8 Sep 2023 10:34:07 -0400
Subject: [PATCH] Adding CPTAC-2 to list. Need to review with previous work
 needs to be commit.

---
 R/prepare.R | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/R/prepare.R b/R/prepare.R
index 0dc407657..ef267041c 100644
--- a/R/prepare.R
+++ b/R/prepare.R
@@ -139,7 +139,7 @@ GDCprepare <- function(
     }
 
     cases <- ifelse(
-        grepl("TCGA|TARGET|CGCI-HTMCP-CC",query$results[[1]]$project %>% unlist()),
+        grepl("TCGA|TARGET|CGCI-HTMCP-CC|CPTAC-2",query$results[[1]]$project %>% unlist()),
         query$results[[1]]$cases,
         query$results[[1]]$sample.submitter_id
     )