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Add minfi Docker container. #57

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Add minfi Docker container. #57

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bgruening
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This PR will create a Docker container for minfi.

ping @nturaga

@nturaga
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nturaga commented May 4, 2016

@bgruening Cheers! Will look at this today.

@thriqon
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thriqon commented May 4, 2016

libGLU.so.1: cannot open shared object file: No such file or directory is the relevant message in the build log. Does this belong to a known package in the repository?

@bgruening
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Oh too bad. libglu belongs to the xserver. I don't think we have a dependency in bioconda for it.

@nturaga
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nturaga commented May 4, 2016

Its the same error we've had on the bioconda repo,

SERR error: unable to load shared object '/usr/local/lib/R/library/rgl/libs/rgl.so':

The next release version of minfi, apparently will not have this as a dependency. (source: Author of minfi)

@bgruening
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@nturaga are you talking about 1.18.0. This was released a few days ago. Do you mind updating the conda package?

@nturaga
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nturaga commented May 9, 2016

Will do @bgruening

@nturaga
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nturaga commented May 9, 2016

@bgruening This should hopefully fix things, bioconda/bioconda-recipes#1513

@bgruening
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Let's see I fear that you need to update the dependencies as well :(

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3 participants