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Issue about tandem repeat GAA in FXN gene missed by TRF. #16

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fjmuzengyiheng opened this issue Nov 29, 2022 · 0 comments
Open

Issue about tandem repeat GAA in FXN gene missed by TRF. #16

fjmuzengyiheng opened this issue Nov 29, 2022 · 0 comments

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@fjmuzengyiheng
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Hi, I am new to this fantastic tool TRF.
When I explore GAA tandem repeats in FXN gene (responsible for a neurogenetic disease, Friedreich ataxia) using UCSC "simple repeats" track, I found this motif "GAA" is not recognized by TRF. I am confused about this.

Could anyone help me with this issue? Thank you!

The locus (hg38):
chr9:69037261-69037304
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@fjmuzengyiheng