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<html>
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<title>
Basic Formal Ontology (BFO) | Users
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Basic Formal Ontology
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<h2>
Users
</h2>
<p>
Below you will find an alphabetical list of ontologies and institutions/groups using BFO.
</p>
<h3>
Ontologies
</h3>
<ul>
<ol>
<li><a href="http://bioportal.bioontology.org/ontologies/ACGT-MO">ACGT Master Ontology (ACGT MO)</a></li>
<li><a href="http://ncor.buffalo.edu/ontologies/AIRS_Ontologies.pdf">Actionable Intelligence Retrieval System (AIRS)</a></li>
<li><a href="https://onlinelibrary.wiley.com/doi/10.1111/add.16010">Addiction Ontology (Addict-O)</a></li>
<li><a href="https://www.sciencedirect.com/science/article/pii/S0166361518301647">Additive Manufacturing Ontology (AMO)</a></li>
<li><a href="https://www.jmir.org/article/viewFile/jmir_v19i7e259/2">Adolescent Depression Ontology (ADO)</a></li>
<li><a href="https://www.frontiersin.org/journals/energy-research/articles/10.3389/fenrg.2024.1356571/full">Advanced Manufacturing Basic Entity Relationships (AMBER) ontology</a></li>
<li><a href="https://www.researchgate.net/publication/384062050">Advanced Product Quality Planning (APQP) Ontology</a></li>
<li><a href="http://purl.obolibrary.org/obo/aero">Adverse Event Reporting Ontology (AERO)</a></li>
<li><a href="http://esw.w3.org/topic/HCLS/AFO_Foundational_Ontology">AFO Foundational Ontology</a></li>
<li><a href="https://arxiv.org/pdf/1905.09519.pdf">African Wildlife Ontology (AWO)</a></li>
<li><a href="https://www.biorxiv.org/content/10.1101/325423v3.full.pdf">Agronomic Linked Data (AgroLD)</a></li>
<li><a href="https://bigdata.cgiar.org/resources/agronomy-ontology/">AGRonomy Ontology (AGRO)</a></li>
<li><a href="https://link.springer.com/article/10.1007/s10845-022-02043-7">Aircraft System Ontology</a></li>
<li><a href="http://ontologydesignpatterns.org/wiki/images/4/41/WOP2016_paper_07.pdf">Algorithm-Implementation-Execution Ontology Design Pattern</a></li>
<li><a href="https://bioportal.bioontology.org/ontologies/AFO">Allotrope Merged Ontology Suite (AFO)</a></li>
<li><a href="http://www.sciencedirect.com/science/article/pii/S155252601300085X">Alzheimer Disease Ontology (ADO)</a></li>
<li><a href="https://ma.x-mol.com/paper/1366901247607140352">Alzheimer's Disease Diagnosis Ontology (ADDO)</a></li>
<li><a href="https://www.preprints.org/manuscript/202201.0254/v1">Anatomy of the Insect Skeleto-Muscular system ontology (AISM)</a></li>
<li><a href="http://ceur-ws.org/Vol-897/session1-paper04.pdf">Animals in Context Ontology (ACO)</a></li>
<li><a href="https://www.semantic-web-journal.net/system/files/swj3553.pdf">Anthropological Notation Ontology (ANNO)</a></li>
<li><a href="https://www.sciencedirect.com/science/article/pii/S1532046411001675">Antimicrobial-Microorganism Ontology</a></li>
<li><a href="http://jbiomedsem.biomedcentral.com/articles/10.1186/s13326-016-0092-y">Apollo Structured Vocabulary (Apollo-SV)</a></li>
<li><a href="https://github.com/johnbeve/Argument-Ontology">Argument Ontology (ARGO)</a></li>
<li><a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8866818/">ARIES (Arkansas Imaging Enterprise System) Knowledge Graph</a></li>
<li><a href="https://bioportal.bioontology.org/ontologies/INBANCIDO">Assessment of Indian Economy During Covid-19 (INBANCIDO)</a></li>
<li><a href="https://www.sciencedirect.com/science/article/abs/pii/S2452414X21000947">Asset Management Ontology (AMODO)</a></li>
<li><a href="http://www.ncbi.nlm.nih.gov/pubmed/26151311">Autism-DSM-ADI-R Ontology (ADAR)</a></li>
<li><a href="http://www.sciencedirect.com/science/article/pii/S1532046415001549">Bacterial Clinical Infectious Diseases Ontology (BCIDO)</a></li>
<li><a href="https://matportal.org/ontologies/BWMD-DOMAIN">Baden Württemberg Materials Digital Domain Ontology (BWMD)</a></li>
<li><a href="https://matportal.org/ontologies/BWMD-MID">Baden Württemberg Materials Digital Mid Ontology (BWMD-MID Ontology)</a></li>
<li><a href="http://world-comp.org/p2011/IKE5165.pdf">Bank Ontology</a></li>
<li><a href="https://essay.utwente.nl/104562/1/VijayKumar_MA_EEMCS.pdf">Barcant Butterfly Collection (BBC) ontology</a></li>
<li><a href="https://www.utwente.nl/en/eemcs/fois2024/resources/papers/ruiz-et-al-a-battery-electric-vehicle-charging-infrastructure-ontology-for-interdisciplinary-research.pdf">Battery Electric Vehicle Charging Infrastructure Ontology </a></li>
<li><a href="http://link.springer.com/article/10.1007/s10489-016-0834-7">Battle Management Ontology (BMO)</a></li>
<li><a href="https://ieeexplore.ieee.org/abstract/document/10521072?casa_token=dnlOWzWSHmgAAAAA:P7u_v3JB33qMvTRP4He41l3UD69GX45HXS84htwIqPPZPhtSEwJFAovknNKxqnJ2VzLOoBM0">Bayesian Verification Ontology Stack</a></li>
<li><a href="https://wellcomeopenresearch.org/articles/5-123">Behavior Change Intervention Ontology (BCIO)</a></li>
<li><a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10427801/">Behaviour Change Technique Ontology</a></li>
<li><a href="https://books.google.com/books?hl=en&lr=lang_en&id=u8xmCgAAQBAJ&oi=fnd&pg=PA366&ots=p35Xg1rqn0&sig=6VibTWt8Y6mpTSyPFFc68xHePDw#v=onepage&q&f=false">Behavior Perspective Model (BPM)</a></li>
<li><a href="http://obofoundry.org/ontology/bcgo.html">Beta Cell Genomics Application Ontology (BCGO)</a></li>
<li><a href="https://www.degruyter.com/view/journals/jib/15/3/article-20180023.xml">Bio-Knowledge Network Ontology (BioKNO)</a></li>
<li><a href="http://www.bioassayontology.org/">BioAssay Ontology</a></li>
<li><a href="https://academic.oup.com/nar/advance-article/doi/10.1093/nar/gkae566/7706482">BioGateway (BGW)</a></li>
<li><a href="https://github.com/obi-webservice/OBIws">Bioinformatics Web Service Ontology (OBIWS)</a></li>
<li><a href="http://obofoundry.org/ontology/bco.html">Biological Collections Ontology (BCO)</a></li>
<li><a href="https://bioportal.bioontology.org/ontologies/BMONT">The Biomarker Ontology (BMONT)</a></li>
<li><a href="http://paulsmart.cognosys.co.uk/pubs/2024/ICBO.pdf">Biomedical Burden Ontology (BBO)</a></li>
<li><a href="http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2725426/">Biomedical Ethics Ontology</a></li>
<li><a href="https://wiki.nci.nih.gov/pages/viewpage.action?pageId=63996208">Biomedical Grid Terminology (BiomedGT, retired)</a></li>
<li><a href="https://doi.org/10.1016/j.jbi.2022.104007">Biomedical Study - Lifecycle Management (BMS-LM) core ontology</a></li>
<li><a href="https://www.mdpi.com/2313-7673/10/1/39">Biomimetic Ontology</a></li>
<li><a href="http://ebooks.iospress.nl/publication/46379">BioTop</a>: a biomedical top-domain ontology</li>
<ul><li><a href="http://purl.org/biotop/btl2.owl"> BioTopLite2</a> (See also <a href="http://purl.org/biotop/btl2-bfo.owl"> BioTopLite2 to BFO bridge</a>)</li></ul>
<li><a href="http://ontology.buffalo.edu/smith/articles/BFLO_ICBO_2011.pdf">Body Fluids Ontology (BFLO)</a></li>
<li><a href="http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3338382/">Bone Dysplasia Ontology (BDO)</a> (see also <a href="http://www.ncbi.nlm.nih.gov/pubmed/22449239">here</a>)</li>
<li><a href="https://www.mdpi.com/2076-3417/13/8/4859">Building Information Management (BIM) domain ontology</a></li>
<li><a href="https://www.biorxiv.org/content/10.1101/2023.10.29.564650v1.full.pdf">Brain Injury Knowledge Ontology (BIKO)</a></li>
<li><a href="https://bioportal.bioontology.org/ontologies/BTO-BFO">Brinell Test Ontology-BFO (BTO-BFO)</a></li>
<li><a href="https://matportal.org/ontologies/BWMD-DOMAIN">BWMD Domain Ontology</a></li>
<li><a href="https://matportal.org/ontologies/BWMD-MID">BWMD Mid-Level Ontology</a></li>
<li><a href="https://matportal.org/ontologies/BWMD">BWMD Original Non-Modularized Ontology</a></li>
<li><a href="http://ceur-ws.org/Vol-1060/icbo2013_submission_75.pdf">Cancer Cell Ontology (OncoCL)</a></li>
<li><a href="http://bioportal.bioontology.org/ontologies/CANCO">Cancer Chemoprevention Ontology (CanCo)</a></li>
<li><a href="https://www.ebi.ac.uk/ols/ontologies/cvdo">Cardiovascular Disease Ontology (CVDO)</a></li>
<li><a href="https://doi.org/10.1109/ISSE51541.2021.9582535">Case Based Reasoning (CBR) Ontology</a></li>
<li><a href="http://www.roentgensemiotics.net/phenomenology.htm">Categorical Temporal Phenomenology</a></li>
<li><a href="https://www.researchprotocols.org/2022/5/e34990">Causal Pathway Ontology</a></li>
<li><a href="http://cbo.biocomplexity.indiana.edu/">Cell Behavior Ontology (CBO)</a></li>
<li><a href="https://bioportal.bioontology.org/ontologies/CCONT">Cell Culture Ontology (CCONT)</a></li>
<li><a href="https://genomebiology.biomedcentral.com/articles/10.1186/gb-2009-10-5-r58">Cell Cycle Ontology</a></li>
<li><a href="http://nar.oxfordjournals.org.gate.lib.buffalo.edu/content/early/2013/12/03/nar.gkt1264.full.pdf">Cell Expression, Localization, Development and Anatomy Ontology (CELDA)</a></li>
<li><a href="http://obofoundry.org/ontology/clo.html">Cell Line Ontology (CLO)</a></li>
<li><a href="http://obofoundry.org/ontology/cl.html">Cell Ontology</a>: designed as a structured controlled vocabulary for cell types</li>
<li><a href="http://jbiomedsem.biomedcentral.com/articles/10.1186/s13326-016-0074-0">Cellular Microscopy Phenotype Ontology (CMPO)</a></li>
<li><a href="https://www.researchgate.net/publication/350106623_CCOnto_The_Character_Computing_Ontology">Character Computing Ontology (CCOnto)</a></li>
<li><a href="https://obofoundry.org/ontology/chiro">CHEBI Integrated Role Ontology (CHIRO)</a></li>
<li><a href="http://champ-project.org/">Chemical Analysis Ontology (CAO)</a></li>
<li><a href="http://www.ebi.ac.uk/chebi">Chemical Entities of Biological Interest (ChEBI)</a></li>
<li><a href="http://obofoundry.org/ontology/cheminf.html">Chemical Information Ontology (CHEMINF)</a></li>
<li><a href="http://obofoundry.org/ontology/chmo.html">Chemical Methods Ontology (CHMO)</a></li>
<li><a href="https://www.ptfcehs.niehs.nih.gov/featured-resources/childrens-health-exposure-analysis-resource">Children's Health Exposure Analysis Resource (CHEAR)</a></li>
<li><a href="https://www.proquest.com/openview/abd4e0fb97c94e8b18a78f626a9aad22/">Cholangiocarcinoma Ontology (CCAO)</a></li>
<li><a href="https://bioportal.bioontology.org/ontologies/CHRO">Chromatin Regulator Ontology (CHRO)</a></li>
<li><a href="http://ceur-ws.org/Vol-833/paper22.pdf">CHRONIOUS Ontology Suite</a></li>
<li><a href="http://www.jbiomedsem.com/content/pdf/2041-1480-5-31.pdf">Cigarette Smoke Exposure Ontology (CSEO)</a></li>
<li><a href="https://www.intechopen.com/chapters/86794">Climate System Ontology (CSO)</a></li>
<li><a href="https://www.ncbi.nlm.nih.gov/pubmed/24954896">Clinical Data Integration Model (CDMO)</a></li>
<li><a href="https://bioportal.bioontology.org/ontologies/LABO">Clinical LABoratory Ontology (LABO)</a></li>
<li><a href="https://link.springer.com/chapter/10.1007/978-3-031-34344-5_42">Clinical Process Modelling Ontology (CPMO)</a></li>
<li><a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3248753/?">Clinical Narrative Temporal Relation Ontology (CNTRO)</a></li>
<li><a href="https://www.sciencedirect.com/science/article/pii/S1569190X18301114">Clinical Trial Protocol Ontology (CTP-O)</a></li>
<li><a href="https://bioportal.bioontology.org/ontologies/CTO">Clinical Trials Ontology (CTO)</a></li>
<li><a href="https://bioportal.bioontology.org/ontologies/CAO">Clusters of Orthologous Groups (COG) Analysis Ontology (CAO)</a></li>
<li><a href="http://archiv.ub.uni-heidelberg.de/volltextserver/22579">Cognition-Guided Surgery (CGS) Ontology</a></li>
<li><a href="https://www.sciencedirect.com/science/article/pii/S1755581724000932">Cognitive Digital Twin (CDT) Ontology Framework</a></li>
<li><a href="http://cogpo.org/">Cognitive Paradigm Ontology (COGPO)</a></li>
<li><a href="https://github.com/CommonCoreOntology/CognitiveProcessOntology">Cognitive Process Ontology (CPO)</a></li>
<li><a href="https://www.sciencedirect.com/science/article/pii/S2405896322021383">Cognitive Twin (CT) Ontology</a></li>
<li><a href="https://onlinelibrary.wiley.com/doi/full/10.1002/lrh2.10306">Collaborative Learning Healthcare Systems (CLHS) ontology</a></li>
<li><a href="https://www.scielo.br/j/babt/a/ZppjVp8tPy7sRYks4MKRynR/">Collembola Anatomy Ontology (CLAO)</a></li>
<li><a href="http://obofoundry.org/ontology/caro.html">Common Anatomy Reference Ontology (CARO)</a>: anatomical structures in all organisms</li>
<li><a href="https://www-spiedigitallibrary-org.gate.lib.buffalo.edu/conference-proceedings-of-spie/10635/106350F/A-common-core-based-cyber-ontology-in-support-of-cross/10.1117/12.2307719.full?SSO=1">Common Core Cyber Ontology (C3O)</a></li>
<li><a href="https://github.com/CommonCoreOntology/">Common Core Ontologies (CCO)</a></li>
<li><a href="https://doi.org/10.1109/AERO55745.2023.10115927">Common Space Systems Ontology (CoSSO)</a></li>
<li><a href="http://www.ncbi.nlm.nih.gov/pubmed/20543345">Communication Standards Ontology (CSO)</a></li>
<li><a href="https://bioportal.bioontology.org/ontologies/CDAO">Comparative Data Analysis Ontology (CDAO)</a></li>
<li><a href="https://doi.org/10.1016/j.jbi.2024.104655">Compliance and Reward Ontology (CaRO)</a></li>
<li><a href="https://bioportal.bioontology.org/ontologies/CNO">Computational Neuroscience Ontology (CNO)</a></li>
<li><a href="https://www.clics-network.org/downloads/NAFEMS_2016_Towards%20Cognitive%20Computer%20Aided%20Engineering.pdf">Computer Aided Engineering Modeling Language (CAEML) Ontology</a></li>
<li><a href="https://code.google.com/archive/p/cpr-ontology/">Computer-Based Patient Record Ontology (CPRO)</a></li>
<li><a href="http://ceur-ws.org/Vol-833/paper25.pdf">Conceptual Model Ontology (CMO)</a></li>
<li><a href="https://obofoundry.org/ontology/cro.html">Contributor Role Ontology (CRO)</a></li>
<li><a href="https://www.researchgate.net/publication/263323866_Clinical_Data_Integration_Model_Core_Interoperability_Ontology_for_Research_Using_Primary_Care_Data">Core Data Integration Model (CDIM)</a></li>
<li><a href="https://obofoundry.org/ontology/cob.html">Core Ontology for Biology and Biomedicine</a></li>
<li><a href="https://doi.org/10.3390/asi5050098">Core Ontology for Describing Production Equipment (OCore)</a></li>
<li><a href="http://efo.sourceforge.net/coriell.htm">Coriell Cell Line Ontology</a></li>
<li><a href="http://www.ontobee.org/ontology/cido">Coronavirus Infectious Disease Ontology (CIDO)</a></li>
<li><a href="https://bioportal.bioontology.org/ontologies/IDO-COVID-19">COVID-19 Infectious Disease Ontology (IDO-COVID-19)</a></li>
<li><a href="https://bioportal.bioontology.org/ontologies/COVID-19">COVID-19 Ontology (COVID-19)</a></li>
<li><a href="http://ceur-ws.org/Vol-833/paper28.pdf">CPR Ontology for the Institute of Medicine's (IOM) Computer-Based Patient Record Ontology</a></li>
<li><a href="https://www.sciencedirect.com/science/article/pii/S2590197424000144">Critical Minerals Ontology (CMO)</a></li>
<li><a href="http://ceur-ws.org/Vol-2969/paper12-IFOW.pdf">Crop Planning and Production Process Ontology (C3PO)</a></li>
<li><a href="https://www.inf.ufrgs.br/ontobras/wp-content/uploads/2024/10/ontobras_2024_paper_10.pdf">Cultural Heritage Objects Patrimonialization Ontology (HOpatr)</a></li>
<li><a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10283130/">Culture, Race, Ethnicity, and Nationality Ontology (CRENO)</a></li>
<li><a href="https://arxiv.org/pdf/2108.00551.pdf">Cognitive Digital Twin Ontology for CyberSecurity (Cybonto)</a></li>
<li><a href="https://www.utwente.nl/en/eemcs/fois2024/resources/papers/limbaugh-beverley-towards-a-cyber-information-ontology.pdf">Cyber Information Ontology</a></li>
<li><a href="https://xmed.jmir.org/2022/2/e33502">Cybonto Conceptual Framework</a></li>
<li><a href="http://ceur-ws.org/Vol-3073/paper3.pdf">Dairy Cattle Performance Ontology (DCPO)</a></li>
<li><a href="https://www.researchgate.net/publication/385870348_Use_Cases_Help_to_Identify_Primary_Concepts_in_Biodiversity_Information_Modeling">Darwin Core</a></li>
<li><a href="https://bioportal.bioontology.org/ontologies/GDCO">Data Collection Ontology (GDCO)</a></li>
<li><a href="https://www.osti.gov/biblio/1616713">Data Integration Aggregated Model for Nuclear Deployment (DIAMOND)</a></li>
<li><a href="https://seco.cs.aalto.fi/publications/2018/tuominen-et-al-rrl-2018.pdf">Data Model for Representing Biographical Information for Prosopography (Bio-CRM)</a></li>
<li><a href="http://www.obofoundry.org/ontology/duo.html">Data Use Ontology (DUO)</a> see also <a href="https://doi.org/10.1016/j.xgen.2021.100028">here</a></li>
<li><a href="https://github.com/michaelfaerber/data-set-knowledge-graph/tree/0aa6750a21027d7e6c13522114f6e62aa0dc35f7">Data Set Knowledge Graph (DSKG)</a></li>
<li><a href="https://doi.org/10.3390/systems6040046">Decision Ontology</a></li>
<li><a href="https://arxiv.org/ftp/arxiv/papers/2311/2311.07595.pdf">Decision Support System for Liver Disease Prediction</a></li>
<li><a href="https://github.com/d3fend/d3fend-ontology/blob/develop/src/ontology/mappings/d3fend-cco.ttl">D3FEND-CCO Mapping (D3CO)</a></li>
<li><a href="https://ceur-ws.org/Vol-2137/ws_SoLe_paper_1.pdf">Deontic Ontology</a></li>
<li><a href="http://link.springer.com/article/10.1186/s40535-016-0021-2">Diabetes mellitus Diagnosis Ontology (DDO)</a></li>
<li><a href="https://jbiomedsem.biomedcentral.com/articles/10.1186/s13326-018-0176-y">Diabetes Mellitus Treatment Ontology (DMTO)</a></li>
<li><a href="https://digitalconstruction.github.io/v/0.5/">Digital Construction Ontologies (DiCon) Suite</a></li>
<li><a href="https://arxiv.org/ftp/arxiv/papers/2206/2206.10454.pdf">Digital Engineering Framework for Integration and Interoperability (DEFII)</a></li>
<li><a href="https://publiscologne.th-koeln.de/frontdoor/deliver/index/docId/1363/file/MAT_Seidlmayer.pdf">Digital Objects in Philosophy Ontology (DOPHO)</a></li>
<li><a href="https://ceur-ws.org/Vol-3882/fomi-4.pdf">Digital Twin Ontology</a></li>
<li><a href="https://link.springer.com/chapter/10.1007/978-3-031-43666-6_22">Digital Twin Ontology Framework for Manufacturing</a></li>
<li><a href="https://papers.ssrn.com/sol3/papers.cfm?abstract_id=3945058">Digital Twin Network</a></li>
<li><a href="https://doi.org/10.1038/s41598-023-34874-6">Disaster Management Ontology (DMO)</a></li>
<li><a href="https://code.google.com/p/d-acts">Document Act Ontology (D-Acts)</a></li>
<li><a href="https://jbiomedsem.biomedcentral.com/articles/10.1186/2041-1480-4-30">Drosophila Phenotype Ontology (DPO)</a></li>
<li><a href="http://ddiem.phenomebrowser.net/">Drug Database for Inborn Errors of Metabolism Ontology (DDIEM)</a></li>
<li><a href="http://www.ncbi.nlm.nih.gov/pubmed/15360854">Drug Interaction Ontology (DIO)</a></li>
<li><a href="http://obofoundry.org/ontology/dron.html">Drug Ontology (DrOn)</a></li>
<li><a href="https://www.researchgate.net/profile/Werner_Ceusters/publication/335079148_Foundations_for_a_Realism-based_Drug_Repurposing_Ontology/links/5d4d7ce44585153e5948eb68/Foundations-for-a-Realism-based-Drug-Repurposing-Ontology.pdf">Drug Repurposing Ontology (DRO)</a></li>
<li><a href="http://obofoundry.org/ontology/dideo.html">Drug-drug Interaction Evidence Ontology (DIDEO)</a></li>
<li><a href="http://www.obofoundry.org/ontology/dinto.html">Drug-drug Interaction Ontology (DINTO)</a></li>
<li><a href="https://doi.org/10.1111/add.16010">E-Cigarette Ontology (E-CigO)</a></li>
<li><a href="https://open.med.harvard.edu/wiki/display/eaglei/Ontology">Eagle-I Research Resource Ontology (ERO)</a></li>
<li><a href="https://bioportal.bioontology.org/ontologies/ECAO">Echinoderm Anatomy and Development Ontology (ECAO)</a></li>
<li><a href="https://bioportal.bioontology.org/ontologies/ECSO">The Ecosystem Ontology (ECSO)</a></li>
<li><a href="https://content.iospress.com/articles/applied-ontology/ao210254">EifcOWL (Enhanced Ontology for the Construction Industry Foundation Classes)</a> see also <a href="http://basic-formal-ontology.org/content.iospress.com/articles/applied-ontology/ao210254">here</a></li>
<li><a href="http://www.j-biomed-inform.com/article/S1532-0464(10)00118-8/abstract">Electrocardiography Ontology (ECG)</a></li>
<li><a href="https://link.springer.com/chapter/10.1007/978-3-031-77792-9_16">ELEctronic knowledge base for Clinicians, Trainers and Researchers in Child Abuse (ELECTRICA) Ontology</a></li>
<li><a href="https://www.sciencedirect.com/science/article/pii/S1569190X18301114">Eligibility Criteria Ontology (EC-O)</a></li>
<li><a href="http://ncor.buffalo.edu/2013/STIDS/5-Email.pptx">Email Ontology</a></li>
<li><a href="http://www.obofoundry.org/ontology/mfoem.html">Emotion Ontology (EMO)</a>: an ontology to describe affective phenomena</li>
<li><a href="https://github.com/enanomapper">ENanoMapper (ENM)</a></li>
<li><a href="https://www.sciencedirect.com/science/article/abs/pii/S0167739X19326640">End of Life (EoL) Domain Ontology</a></li>
<li><a href="https://iris.cnr.it/retrieve/8d03906c-a93e-487a-9f00-df4f608c7b4d/gEneSys%20-%20D.1.1%20-%20Systematic%20literature%20review%20of%20the%20studies%20at%20the%20nexus%20of%20gender%20equality%20and%20sustainable%20energy%20systems%20and%20ontology%20of%20energy%20systems-3.pdf">Energy System Ontology (ESO)</a></li>
<li><a href="https://www.mdpi.com/2411-9660/2/4/53">Engineering-to-BioMimetic Ontology (E2BMO)</a></li>
<li><a href="https://ieeexplore.ieee.org/abstract/document/10115927">Environmental Control and Life Support System (ECLSS) Ontology</a></li>
<li><a href="http://obofoundry.org/ontology/envo.html">Environment Ontology (ENVO)</a></li>
<li><a href="http://www.semantic-web-journal.net/system/files/swj3043.pdf">ENVOn (3D shape ontology)</a></li>
<li><a href="http://obofoundry.org/ontology/epo.html">Epidemiology Ontology (EPO)</a></li>
<li><a href="https://bioportal.bioontology.org/ontologies/EGO">Epigenome Ontology (EGO)</a></li>
<li><a href="http://www.ncbi.nlm.nih.gov/pubmed/23686934">Epilepsy and Seizure Ontology (EPSO)</a></li>
<li><a href="https://www.researchsquare.com/article/rs-1259791/v1">EpilepsyOntology (EPIO)</a></li>
<li><a href="https://www.mdpi.com/2075-4426/13/8/1209">Ethically Driven Robotics and Automation Systems (ERAS) Ontology</a></li>
<li><a href="https://bioportal.bioontology.org/ontologies/EO">Ethnicity Ontology (EO)</a></li>
<li><a href="https://emmc.info/wp-content/uploads/2017/12/EMMC_IntOp2017-Cambridge_Ghedini_Bologna.pdf">European Materials Modeling Ontology (EMMO)</a></li>
<li><a href="http://ceur-ws.org/Vol-1660/caos-paper2.pdf">Event-Based Functional Behavior Ontology (EFBO)</a></li>
<li><a href="https://www.emeraldinsight.com/doi/abs/10.1108/DLP-02-2018-0005">Event-Based Ontology for Historical Description (EOHD)</a></li>
<li><a href="https://code.google.com/archive/p/evolution-ontology/">Evolution Ontology (EO)</a></li>
<li><a href="https://www.nature.com/articles/s41597-024-04217-9">Exercise Medicine Ontology (EXMO)</a></li>
<li><a href="http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4255744">(EXperimental ACTions) Biomedical Protocol Ontology (EXACT2)</a></li>
<li><a href="http://www.ebi.ac.uk/efo">Experimental Factor Ontology (EFO)</a></li>
<li><a href="https://lirias.kuleuven.be/bitstream/123456789/273222/1/sokd10.pdf">Exposé</a>: an ontology for data mining experiments</li>
<li><a href="https://www.researchgate.net/profile/Robert_Allen5/publication/325141757_XFO_Toward_Programming_Rich_Semantic_Models/links/5afa473d458515c00b6bd24f/XFO-Toward-Programming-Rich-Semantic-Models.pdf?origin=publication_detail">eXtended Formal Ontology (XFO)</a></li>
<li><a href="https://bioportal.bioontology.org/ontologies/FASTO">FASTO Ontology (incorporates BFO, FHIR, CPG,and SSN)</a></li>
<li><a href="https://onlinelibrary.wiley.com/doi/pdf/10.1002/adem.202400675">Fatigue Test Ontology (FTO)</a></li>
<li><a href="https://github.com/Display-Lab">Feedback Intervention Ontology (FIO)</a></li>
<li><a href="http://ceur-ws.org/Vol-2969/paper57-SoLEE.pdf">Financial Documents Ontology (FIN)</a></li>
<li><a href="http://www.pombase.org/documentation/gene-page-phenotypes">Fission Yeast Phenotype Ontology (FYPO)</a></li>
<li><a href="http://www.sciencedirect.com/science/article/pii/S157495411400082X">Flower-Visiting Domain Ontology (FV)</a></li>
<li><a href="http://www.sciencedirect.com/science/article/pii/S157495411400082X">Known Flower-Visiting Group Domain Ontology (KFG)</a></li>
<li><a href="http://www.sciencedirect.com/science/article/pii/S157495411400082X">Flower-Visiting Behavior Application Ontology (FVB)</a></li>
<li><a href="http://www.sciencedirect.com/science/article/pii/S157495411400082X">Observation-Date Application Ontology (OBD)</a></li>
<li><a href="http://obofoundry.org/ontology/fbbt.html">Flybase Drosophila Anatomy Ontology (DAO)</a></li>
<li><a href="http://obofoundry.org/ontology/fypo.html">Flybase Drosophila Phenotype Ontology (FYPO)</a></li>
<li><a href="http://obofoundry.org/ontology/foodon.html">Food Ontology (FoodOn)</a></li>
<li><a href="https://doi.org/10.3390/s22031095">Food Recipe Ingredient Substitution Ontology (FRISO)</a></li>
<li><a href="https://www.liebertpub.com/doi/full/10.1089/ees.2018.0551">Food-Energy-Water Systems Ontology (FEWsONT)</a></li>
<li><a href="http://obofoundry.org/ontology/fma.html">Foundational Model of Anatomy (FMA)</a></li>
<li><a href="http://ceur-ws.org/Vol-2228/abstract6.pdf">Framework for Semantic Workflow Composition in the Geology Domain</a></li>
<li><a href="https://github.com/futres/fovt">FuTRES Ontology of Vertebrate Traits (FOVT)</a></li>
<li><a href="http://ceur-ws.org/Vol-833/paper36.pdf">Gastrointestinal Endoscopy Ontology (GIEO)</a></li>
<li><a href="https://academic-oup-com.gate.lib.buffalo.edu/jamia/advance-article-abstract/doi/10.1093/jamia/ocaa061/5858296">Gender, Sex, and Sexual Orientation (GSSO) ontology</a></li>
<li><a href="http://obofoundry.org/ontology/go.html">Gene Ontology (GO)</a></li>
<li><a href="https://ub-madoc.bib.uni-mannheim.de/35191/1/dissertation_beisswanger.pdf">Gene Regulation Ontology (GRO)</a></li>
<li><a href="http://jamia.bmj.com/content/20/5/986.full">General Information Model (GIM)</a></li>
<li><a href="https://doi.org/10.1093/bioadv/vbad102">Genesis Ontology</a></li>
<li><a href="https://github.com/wawrzik/GENIALOntologies">GENIAL! Basic Ontology (GBO)</a></li>
<li><a href="http://obofoundry.org/ontology/genepio.html">Genomic Epidemiology Application Ontology (GenEpiO)</a></li>
<li><a href="https://peerj.com/articles/933/">Genomic Feature and Variation Ontology (GFVO)</a></li>
<li><a href="https://github.com/Nits11/GIBO">Genomics Integrated Biobanking Ontology (GIBO)</a></li>
<li><a href="https://bioportal.bioontology.org/ontologies/GENO">Genotype Ontology (GENO)</a></li>
<li><a href="https://www.lume.ufrgs.br/bitstream/handle/10183/225741/001129935.pdf">GeoCore Geology Ontology</a> see also <a href="https://doi.org/10.1016/j.cageo.2019.104387">here</a></li>
<li><a href="https://doi.org/10.1016/j.cageo.2023.105478 ">GeoFault Ontology</a></li>
<li><a href="http://www.obofoundry.org/ontology/geo.html">Geographical Entity Ontology (GEO)</a></li>
<li><a href="https://github.com/BDI-UFRGS/GeologicalSpatialRelationsOntology">Geological Spatial Relations Ontology</a></li>
<li><a href="https://www.sciencedirect.com/science/article/pii/S0098300421002880">GeoReservoir ontology for deep-marine depositional system geometry</a></li>
<li><a href="https://opengeospatial.github.io/ogc-geosparql/geosparql11/spec.pdf">GeoSPARQL</a></li>
<li><a href="https://ieeexplore.ieee.org/abstract/document/6956738">Gestalt</a>: Federated Access to Cyber Observables for Detection of Targeted Attack</li>
<li><a href="https://bioportal.bioontology.org/ontologies/GCBO">Global Code Book Ontology (GCBO)</a></li>
<li><a href="https://www.sciencedirect.com/science/article/pii/S1569190X18301114">Global Electronic Health Record Ontology (G-EHR-O)</a></li>
<li><a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9750110/">Glyco-Enzyme Pathway and Molecular Function Ontology (GlycoEnzOnto)</a></li>
<li><a href="https://ieeexplore.ieee.org/stamp/stamp.jsp?arnumber=9534721">Graphs, Objects, Points, Properties, Roles, and Relationships Ontology (GOPPRRE)</a> with extensions</li>
<li><a href="https://ndia-mich.org/images/events/gvsets/2024/papers/DE%20SE/1%2030PM%20GVSMO%20-%20An%20Ontology%20for%20the%20Simulation%20Modeling%20of%20Ground%20Vehicles.pdf">Ground Vehicle Simulation Modeling Ontology (GVSMO)</a></li>
<li><a href="https://doi.org/10.3390/su132413844">Healthy City (HC) Ontology</a></li>
<li><a href="http://purl.org/hdot">Health Data Ontology Trunk (HDOT)</a></li>
<li><a href="https://bioportal.bioontology.org/ontologies/HSO">Health Surveillance Ontology (HSO)</a></li>
<li><a href="http://mba.eci.ufmg.br/downloads/ontobras-2013_paper1.pdf">Hemocomponents and Hemoderivatives Ontology (HEMONTO)</a></li>
<li><a href="https://dspacecris.eurocris.org/bitstream/11366/2478/2/EUNIS2023_VIVO_AGuillaumet_paper71.pdf ">Hercules Network of Ontologies (ROH) </a></li>
<li><a href="https://www.sciencedirect.com/science/article/pii/S0264127521007486">HERMES 4D Printing Ontology</a></li>
<li><a href="https://www.biorxiv.org/content/10.1101/2023.03.09.531883v1.full.pdf">Homeostasis Imbalance Process Ontology (HoIP)</a></li>
<li><a href="http://bioportal.bioontology.org/ontologies/HPIO?p=classes">Host Pathogen Interactions Ontology (HPO)</a></li>
<li><a href="https://arxiv.org/ftp/arxiv/papers/1809/1809.09548.pdf">Human Activity and Infrastructure Foundry (HAIF)</a></li>
<li><a href="http://www.obofoundry.org/ontology/doid.html">Human Disease Ontology (DOID)</a></li>
<li><a href="https://www.researchgate.net/publication/316557588_A_Human_Experience_Realist_Ontology_in_Basic_Formal_Ontology">Human Experience Realist Ontology (HERO)</a></li>
<li><a href="http://arxiv.org/pdf/1311.3355.pdf">Human Interaction Network Ontology (HINO)</a></li>
<li><a href="http://www.jbiomedsem.com/content/pdf/2041-1480-4-35.pdf">Human Physiology Simulation Ontology (HuPSON)</a> (see also <a href="http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4177144/">here</a>)</li>
<li><a href="https://bioportal.bioontology.org/ontologies/HTN">Hypertension Ontology (HTN)</a></li>
<li><a href="https://pmc.ncbi.nlm.nih.gov/articles/PMC9975785/">IDEAS expAnded wiTh BCIO (SATO)</a></li>
<li><a href="https://bioportal.bioontology.org/ontologies/IBO">Imaging Biomarker Ontology (IBO)</a></li>
<li><a href="https://www.engr.colostate.edu/~drherber/files/Ontology%20Development%20with%20Prot%C3%A9g%C3%A9.pdf">Incose Digital Engineering Information Exchange (DEIX) Ontology</a></li>
<li><a href="https://www.iso.org/standard/87560.html">Industrial Data Ontology (IDO)</a></li>
<li><a href="http://ceur-ws.org/Vol-3240/paper3.pdf">Industrial Ontologies Foundry (IOF) Core Ontology</a></li>
<li><a href="https://spec.industrialontologies.org/ontology/maintenance/MaintenanceReferenceOntology/">Industrial Ontology Foundry (IOF) Maintenance Reference Ontology</a></li>
<li><a href="https://doi.org/10.1016/j.aei.2023.102185">Industrial Production Workflow Ontologies (InPro)</a></li>
<li><a href="https://sensorsportal.com/p_3342.html">Industry 4.0 Field Device (I40FD) ontology</a></li>
<li><a href="https://link.springer.com/chapter/10.1007/978-3-319-99707-0_40">Industry Skills and Professions Ontology (ISPO)</a></li>
<li><a href="http://obofoundry.org/ontology/ido.html">Infectious Disease Ontology</a></li>
<li><a href="https://bioportal.bioontology.org/ontologies/FLU">Influenza Ontology (FLU)</a></li>
<li><a href="http://obofoundry.org/ontology/iao.html">Information Artifact Ontology (IAO)</a></li>
<li><a href="https://ieeexplore.ieee.org/abstract/document/8795392">Information Security Domain (ISD) ontology</a></li>
<li><a href="http://ceur-ws.org/Vol-2285/ICBO_2018_paper_59.pdf">Informed Consent Ontology (ICO)</a></li>
<li><a href="http://computingengineering.asmedigitalcollection.asme.org/article.aspx?articleid=2674329">Innovative Capabilities of Additive Manufacturing (ICAM) Ontology</a></li>
<li><a href="https://buffalo.app.box.com/v/integrating-ontologies">Integrated Framework for Additively Manufactured Products (IFAMP) ontology</a></li>
<li><a href="https://doi.org/10.1038/s41597-021-01112-5">Integrative and Conjugative Element Ontology (ICEO)</a></li>
<li><a href="http://www.cmpe.boun.edu.tr/~ozgur/papers/VDOS2014.pdf">Interaction Network Ontology (INO)</a></li>
<li><a href="http://ipop.ontodev.com/">Interdisciplinary Prostate Ontology Project (IPOP)</a></li>
<li><a href="http://www.ic-foods.org/">International Center for Food Ontology, Operability, Data and Semantics (IC-FOODS)</a></li>
<li><a href="https://bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-021-04402-2">International Classification of Diseases Ontology (ICDO) </a></li>
<ul><li><a href="https://github.com/IC-FOODS/uc_Eating"> uc_Eating</a>: an ontology for the characterization of eating, drinking and otherwise consuming foods</li><li><a href="https://github.com/IC-FOODS/uc_FoodDrugInteractionOntology"> uc_FoodDrugInteractionOntology</a>: an ontology for the characterization of interactions between foods and drugs</li><li><a href="https://github.com/IC-FOODS/uc_Milk"> uc_Milk</a>: an ontology for the characterization of mammalian milks</li><li><a href="https://github.com/IC-FOODS/uc_Processing"> uc_Processing</a>: an ontology for the characterization of processing methods and the products they engender</li><li><a href="https://github.com/IC-FOODS/uc_Sense"> uc_Sense</a>: an ontology for the characterization of sensory perception, qualities, and attributes</li></ul>
<li><a href="https://doi.org/10.3390/systems6040046">Interoperability and Integration Framework (IoIF)</a></li>
<li><a href="https://wellcomeopenresearch.org/articles/5-124">Intervention Setting Ontology</a></li>
<li><a href="http://www.sciencedirect.com/science/article/pii/S1532046415000519">Intracranial Aneurysm (ICA) Ontology</a></li>
<li><a href="https://www.researchsquare.com/article/rs-2026582/v1">Intraoperative Neurophysiological Monitoring Document Ontology (IOMDO)</a></li>
<li><a href="https://bioportal.bioontology.org/ontologies/INBIO">Invasion Biology Ontology (INBIO)</a></li>
<li><a href="https://formative.jmir.org/2024/1/e53711">IoT-based Management of Infectious Disease Ontology (IoT-MIDO)</a></li>
<li><a href="https://agbeltran.github.io/talks/2013-02-27-cshals">ISA Infrastructure for the Biosciences</a></li>
<li><a href="https://jbiomedsem.biomedcentral.com/articles/10.1186/s13326-021-00237-1">Iranian Traditional Medicine General Ontology (IrGO)</a></li>
<li><a href="https://link.springer.com/chapter/10.1007/978-981-99-8819-8_45">Joining Process Ontology (JPO)</a></li>
<li><a href="https://bioportal.bioontology.org/ontologies/KTAO">Kidney Tissue Atlas Ontology (KTAO)</a></li>
<li><a href="https://hal.science/hal-03996128/document">Kinship Ontology</a></li>
<li><a href="http://www.referent-tracking.com/RTU/files/Rabenberg-Pengput-Ceusters-ICBO2023-for-publication.pdf">Knowledge-Augmented Maintenance Model for Sustainable Manufacturing (KARMA)</a></li>
<li><a href="http://www.biomedcentral.com/content/pdf/s12859-015-0559-3.pdf">Knowledge Base Of Biomedicine (KaBOB)</a></li>
<li><a href="https://www.mdpi.com/2076-3417/13/18/10497">Knowledge Graph for Dementia (DemKG)</a></li>
<li><a href="https://riojournal.com/article/109307/">Knowledge Object Implementation Ontology (KOIO)</a></li>
<li><a href="https://onlinelibrary.wiley.com/doi/full/10.1002/lrh2.10054">Knowledge Object Reference Ontology (KORO)</a></li>
<li><a href="https://matportal.org/ontologies/LPBFO">Laser Powder Bed Fusion Ontology (LPBFO)</a></li>
<li><a href="https://doi.org/10.5194/egusphere-egu23-16768">Levee System Ontology (LSO)</a></li>
<li><a href="https://bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-017-1981-5">Library of Integrated Network-based Cellular Signatures</a></li>
<li><a href="https://link.springer.com/chapter/10.1007/978-3-031-43688-8_35">Life Cycle Assessment (LCA) Ontology</a></li>
<li><a href="https://bioportal.bioontology.org/ontologies/LIFO">Life Ontology (LIFO)</a></li>
<li><a href="http://obofoundry.org/ontology/lipro.html">Lipid Ontology</a></li>
<li><a href="https://www.researchgate.net/publication/332832296_The_Literary_Theme_Ontology_for_Media_Annotation_and_Information_Retrieval">Literary Theme Ontology (LTO)</a></li>
<li><a href="https://openreview.net/pdf?id=B1e8MrXVxQ">Machine Learning Schema (ML-Schema) ontology</a></li>
<li><a href="https://link.springer.com/article/10.1007/s12021-024-09664-8">Magnetic Resonance Imaging Acquisition and Analysis Ontology (MRIO)</a></li>
<li><a href="https://doi.org/10.1016/j.compind.2024.104124">Maintainability Design Ontology for Complex prOducts (MDOCO)</a></li>
<li><a href="http://www.semantic-web-journal.net/system/files/swj3067.pdf">Maintenance Activity Reference Ontology</a></li>
<li><a href="https://www.sciencedirect.com/science/article/abs/pii/S2452414X24001031">Maintenance Motion State Sequence Ontology (MMSSO)</a></li>
<li><a href="https://www.semantic-web-journal.net/content/ontology-maintenance-activities-and-its-application-data-quality-1">Maintenance Work Order (MWO) ontology</a></li>
<li><a href="http://obofoundry.org/ontology/mro.html">Major histocompatibility complex (MHC) Restriction Ontology (MRO)</a></li>
<li><a href="http://obofoundry.org/ontology/idomal.html">Malaria Ontology (IDOMAL)</a></li>
<li><a href="https://bioportal.bioontology.org/ontologies/MFMO">Mammalian Feeding Muscle Ontology (MFMO)</a></li>
<li><a href="https://doi.org/10.1016/j.compind.2024.104101">Manufacturing Process Ontology (MPO)</a></li>
<li><a href="https://doi.org/10.1115/detc2006-99600">Manufacturing Service Description Language (MSDL) ontology</a></li>
<li><a href="https://buffalo.box.com/s/rbapg73v4jq18dvw0rf2jnszndvnxmb0">Manufacturing Supply Chain Ontology (MSCO)</a></li>
<li><a href="https://matportal.org/ontologies/MDS">Materials Data Science (MDS) Ontology</a></li>
<li><a href="https://matportal.org/ontologies/MSEO">Material Science and Engineering Ontology (MSEO)</a></li>
<li><a href="https://nfdi-matwerk.pages. rwth-aachen.de/ta-oms/mwo/docs/index.htm">Matwerk Ontology (MWO)</a></li>
<li><a href="https://doi.org/10.1016/j.compind.2023.104016">Mechanical Testing Ontology (MTO) </a></li>
<li><a href="https://wellcomeopenresearch.org/articles/8-337/v2">Mechanisms of Action (MoA) Ontology</a></li>
<li><a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10370244/">Medical Action Ontology (MAxO)</a></li>
<li><a href="https://bioportal.bioontology.org/ontologies/MIDO?p=classes">Medical Imaging and Diagnostic Ontology (MIDO)</a></li>
<li><a href="https://scholarworks.iupui.edu/bitstream/handle/1805/17767/Sawesi_iupui_0104D_10326.pdf">Medication Adherence Behavior Ontology (MAB-Ontology)</a></li>
<li><a href="http://obofoundry.org/ontology/mfomd.html">MFO Mental Disease Ontology (MFO-MD)</a></li>
<li><a href="http://obofoundry.org/ontology/mf.html">Mental Functioning Ontology (MF)</a></li>
<li><a href="http://jbiomedsem.biomedcentral.com/articles/10.1186/s13326-016-0060-6">Microbiology Ontology (MicrO)</a></li>
<li><a href="https://bioportal.bioontology.org/ontologies/MCO">Microbial Conditions Ontology (MCO)</a></li>
<li><a href="http://www.phyloviz.net/typon">(Microbial) Typing Ontology (TypOn)</a></li>
<li><a href="http://p-medicine.eu/project/wp-4">Middle Layer Ontology for Clinical Care (MLOCC)</a></li>
<li><a href="http://basic-formal-ontology.org/publications#salmen">Military Ontology</a></li>
<li><a href="http://link.springer.com/article/10.1007/s10489-016-0834-7">Military Scenario Ontology (MSO)</a></li>
<li><a href="http://www.ncbi.nlm.nih.gov/pubmed/27139388">Minimum Information Model for Patient Safety (MIMPS)</a></li>
<li><a href="https://www.ebi.ac.uk/ols4/ontologies/mpio">Minimum PDDI Information Ontology (MPIO)</a></li>
<li><a href="http://iwbbio.ugr.es/2014/papers/IWBBIO_2014_paper_103.pdf">miRNAO</a>: an Ontology Unfolding the Domain of microRNAs</li>
<li><a href="http://www.plosntds.org/article/info:doi/10.1371/journal.pntd.0000465">MIRO and IRbase</a>: IT Tools for the Epidemiological Monitoring of Insecticide Resistance in Mosquito Disease Vectors</li>
<li><a href="https://ieeexplore.ieee.org/abstract/document/8455742/">Mission and Means Framework (MMF) Ontology</a></li>
<li><a href="https://www.mdpi.com/2075-5309/15/1/133">Mixture of Domain (MoD) Ontologies</a></li>
<li><a href="https://link.springer.com/article/10.1007/s43684-022-00021-7">MOCA (Multi-attribute Ontology-based Criticality Analysis)</a></li>
<li><a href="https://www.spiedigitallibrary.org/conference-proceedings-of-spie/10635/106350H/Problems-with-prescriptions--disentangling-data-about-actual-versus-prescribed/10.1117/12.2307718.short?SSO=1">Modal Relation Ontology (MRO)</a></li>
<li><a href="https://wellcomeopenresearch.org/articles/5-125">Mode of Delivery (MoD) Ontology</a></li>
<li><a href="https://doi.org/10.1186/s12859-022-04797-6">Model Card Report Ontology (MCRO)</a></li>
<li><a href="http://bmcmedinformdecismak.biomedcentral.com/articles/10.1186/s12911-016-0248-9">Model for Clinical Information (MCI)</a></li>
<li><a href="https://www.preprints.org/manuscript/202201.0254/v1">Model for Describing Insect Anatomical Structures (MoDIAS)</a></li>
<li><a href="https://link.springer.com/book/10.1007/978-3-030-53214-7">Modern Conflict Ontology (MCO)</a></li>
<li><a href="https://linkinghub.elsevier.com/retrieve/pii/S1364815218301221">Modular Environmental Modeling Ontology (MEMOn)</a></li>
<li><a href="https://arxiv.org/pdf/2404.05224.pdf">Modular Maintenance Ontology (IOF-MAINT)</a></li>
<li><a href="http://purl.obolibrary.org/obo/MOP_0000079">Molecular Process Ontology (MOP)</a></li>
<li><a href="http://obofoundry.org/ontology/mpath.html">Mouse Pathology Ontology (MPATH)</a></li>
<li><a href="doi:10.1017/S0890060423000215"></a>Multiple Aspects Maintenance Ontology (MuAMO)</li>
<li><a href="http://obofoundry.org/ontology/rxno.html">Name Reaction Ontology (RXNO)</a></li>
<li><a href="http://www.ncbi.nlm.nih.gov/pubmed/20211274">Nanoparticle Ontology (NPO)</a>: Ontology for Cancer Nanotechnology Research</li>
<li><a href="https://www.bjbabe.ro/wp-content/uploads/2017/10/18_RODINO.pdf">Nanoparticles Impact on Human Cell morphology Ontology (NIHCO)</a></li>
<li><a href="https://arxiv.org/pdf/2408.08698">National Research Data Infrastructure for Data Science Ontology (NFDI4DSO)</a></li>
<li><a href="https://doi.org/10.1007/978-3-030-33778-0_19">Neurodegenerative Disease Data Ontology (NDDO)</a></li>
<li><a href="https://bioportal.bioontology.org/ontologies/NEOMARK4">Neomark Oral Cancer Ontology (NEOMARK4)</a></li>
<li><a href="https://www.nitrc.org/projects/nemo">Neural Electromagnetic Ontologies (NEMO)</a>: Ontology-based Tools for Representation and Integration of Event-related Brain Potentials</li>
<li><a href="https://bioportal.bioontology.org/ontologies/NEIO">Neural Electronic Interface Ontology</a></li>
<li><a href="https://pmc.ncbi.nlm.nih.gov/articles/PMC9547803/">Neuron Phenotype Ontology (NPOKB)</a></li>
<li><a href="https://bioportal.bioontology.org/ontologies/NIO">Neuropsychological Integrative Ontology (NIO)</a></li>
<li><a href="http://www.unbsj.ca/sase/csas/data/ws/icbo2013/papers/research/icbo2013_submission_31.pdf">NeuroPsychological Testing Ontology (NPT)</a></li>
<li><a href="http://www.neuinfo.org/">Neuroscience Information Framework</a> (see also <a href="http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3381282">here</a>)</li>
<ul><li><a href="https://bioportal.bioontology.org/ontologies/NIFCELL">Neuroscience Information Framework Cell Ontology (NIFCELL)</a></li><li><a href="https://bioportal.bioontology.org/ontologies/NIFDYS"> Neuroscience Information Framework Dysfunction Ontology (NIFDYS)</a></li><li><a href="http://bioportal.bioontology.org/ontologies/NIFSTD"> Neuroscience Information Framework Standard Ontology (NIFSTD)</a>: a collection of OWL modules covering distinct domains of biomedical reality</li></ul>
<li><a href="https://arxiv.org/pdf/2410.01821">NFDIcore 2.0 (German) National Research Data Infrastructure ontology</a></li>
<li><a href="https://www.tandfonline.com/doi/full/10.1080/27660400.2024.2354651">NIMS Polymer Database (PoLyInfo) Ontology</a></li>
<li><a href="https://bioportal.bioontology.org/ontologies/NLN">NLighten Ontology (NLN)</a></li>
<li><a href="https://bioportal.bioontology.org/ontologies/NMDCO">NMDC Ontology (NMDCO)</a></li>
<li><a href="https://bioportal.bioontology.org/ontologies/NMR">NMR-Controlled Vocabulary (NMR)</a></li>
<li><a href="http://bioportal.bioontology.org/ontologies/NMR?p=classes&conceptid=root">NMR-Instrument Component of Metabolomics Investigations Ontology</a></li>
<li><a href="http://soc.southalabama.edu/~huang/papers/BIBM-15-1.pdf">Non-Coding RNA Ontology (NCRO)</a></li>
<li><a href="https://link.springer.com/chapter/10.1007/978-3-030-82083-1_2">Nuclear Design Ontology</a></li>
<li><a href="https://doi.org/10.1166/jctn.2020.8662">OBDMR: An Ontology-Based Data Model for Railways</a></li>
<li><a href="https://www.sciencedirect.com/science/article/pii/S0169260719300665">OBR Scolio (scoliosis) ontology</a></li>
<li><a href="https://bioportal.bioontology.org/ontologies/OCD">OCD Ontology (OCD)</a></li>
<li><a href="http://www.unbsj.ca/sase/csas/data/ws/icbo2013/papers/posters/icbo2013_submission_67.pdf">Ocular Disease Ontology (ODO)</a></li>
<li><a href="https://www.sciencedirect.com/science/article/pii/S001048252100336X">Ocular Immune-Mediated Inflammatory Diseases Ontology (OcIMIDo)</a></li>
<li><a href="https://github.com/Occupation-Ontology/OccO">The Occupation Ontology (OccO)</a></li>
<li><a href="https://www.sciencedirect.com/science/article/abs/pii/S0957417423026064">Offshore Petroleum Production Plant Ontology (O3PO)</a></li>
<li><a href="http://ceur-ws.org/Vol-1546/poster_65.pdf">OncoCL-KB</a>: Knowledgebase for Integration of Clinical and Molecular Cancer Data</li>
<li><a href="http://ceur-ws.org/Vol-1041/ontobras-2013_paper52.pdf">OntoAlign++</a>: A Combined Strategy for Improving Ontologies Alignment</li>
<li><a href="https://doi.org/10.1007/978-3-031-37189-9_30">OntoBuildableSpace Ontology</a></li>
<li><a href="https://www.researchgate.net/publication/271952542_Ontology_of_core_data_mining_entities">OntoDM Core</a></li>
<li><a href="http://www2.marilia.unesp.br/revistas/index.php/bjis/article/viewFile/5426/3970">OntoForInfoScience</a></li>
<li><a href="https://ontospm.univ-rennes1.fr/doku.php?id=ontology">Ontologies for Representing Surgical Procedure Models (OntoSPM)</a></li>
<li><a href="https://arxiv.org/pdf/2406.15268">Ontologies for the Emergency Road Vehicle Domain</a></li>
<li><a href="http://obofoundry.org/ontology/omiabis.html">Ontologized Minimum Information About BIobank data Sharing (OMIABIS)</a></li>
<li><a href="https://www.ingentaconnect.com/contentone/asp/jctn/2020/00000017/00000001/art00042">Ontology Based Clinical Decision Support System for Geriatrics</a></li>
<li><a href="http://www.sciencedirect.com.gate.lib.buffalo.edu/science/article/pii/S1570826815000165">Ontology-Based Data Access (OBDA)</a></li>
<li><a href="https://www.researchgate.net/publication/312296048">Ontology Based Decision Support System for Tuberculosis Management and Control</a></li>
<li><a href="https://doi.org/10.1007/978-981-99-9836-4_18">Ontology-Based Editor for Manuscript Transcription and Annotation</a></li>
<li><a href="http://www.ncbi.nlm.nih.gov/pubmed/20460173">Ontology-Based eXtensible Data Model (OBX)</a></li>
<li><a href="https://doi.org/10.3390/make6020042">Ontology-Based Generation of Causal Graphs (CGs)</a></li>
<li><a href="http://www.sciencedirect.com/science/article/pii/S0952197615000913">Ontology-Driven Information System (ODIS)/Ontology-Driven Scenario Generator (ODSG)</a></li>
<li><a href="http://obofoundry.org/ontology/oae.html">Ontology for Adverse Events (OAE)</a></li>
<li><a href="http://www.sciencedirect.com/science/article/pii/S1532046415001367">Ontology for Autism Spectrum Disorder</a></li>
<li><a href="http://obofoundry.org/ontology/obib.html">Ontology for Biobanking (OBIB)</a></li>
<li><a href="https://doi.ieeecomputersociety.org/10.1109/BIBM58861.2023.10385562">Ontology for Biofilms (BIFO)</a></li>
<li><a href="http://obofoundry.org/ontology/obi.html">Ontology for Biomedical Investigations (OBI)</a></li>
<li><a href="https://bioportal.bioontology.org/ontologies/OBI_IEE">The Ontology for Biomedical Investigation based Inner Ear Electrophysiology (OBI_IEE)</a></li>
<li><a href="https://bmcmedinformdecismak.biomedcentral.com/articles/10.1186/s12911-018-0636-4">Ontology for Cancer research variables (OCRV)</a></li>
<li><a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6371316/">Ontology for Computable Eligibility Criteria - Hepatitis C Virus (OCEC-HCV)</a></li>
<li><a href="http://journals.plos.org/plosntds/article?id=10.1371/journal.pntd.0003479">Ontology for Dengue Fever (IDODEN)</a></li>
<li><a href="http://ceur-ws.org/Vol-2427/SEPDA_2019_paper_15.pdf">Ontology for Documentation of Variable/Data Source Selection (ODVDS)</a></li>
<li><a href="https://code.google.com/archive/p/ddi-ontology/">Ontology for Drug Discovery Investigations (DDI)</a></li>
<li><a href="https://bioportal.bioontology.org/ontologies/ELECTRICA">Ontology for ELEctronic tool for Clinicians, Trainers and Researchers In Child Abuse (ELECTRICA)</a></li>
<li><a href="https://www.researchgate.net/publication/234128482_Facilitating_Knowledge_Sharing_and_Analysis_in_Energy_Informatics_with_the_Ontology_for_Energy_Investigations_%28OEI%29">Ontology for Energy Investigations (OEI)</a></li>
<li><a href="https://www.academia.edu/27922525/Development_of_a_Manufacturing_Ontology_for_Functionally_Graded_Materials">Ontology for Functionally Graded Materials (OFGM)</a></li>
<li><a href="http://obofoundry.org/ontology/ogms.html">Ontology for General Medical Science (OGMS)</a></li>
<li><a href="http://www.ontobee.org/ontology/OGG-Mm">Ontology for Genes and Genomes - Mouse (OGG-MM)</a></li>
<li><a href="http://bioportal.bioontology.org/ontologies/OGI?p=classes&conceptid=root">Ontology for Genetic Interval (OGI)</a></li>
<li><a href="http://obofoundry.org/ontology/ogsf.html">Ontology for Genetic Susceptibility Factor (OGSF)</a></li>
<li><a href="http://www.sciencedirect.com/science/article/pii/S1532046411001675">Ontology for Guiding Appropriate Antibiotic Prescribing</a></li>
<li><a href="https://www.researchgate.net/publication/299534658_OntoforInfoScience_a_detailed_methodology_for_construction_of_ontologies_and_its_application_in_the_blood_domain">Ontology for Information Science (OntoforInforScience)</a></li>
<li><a href="http://link.springer.com/article/10.1007/s11548-015-1222-1">Ontology for Laparoscopic Surgeries (LapOntoSPM)</a></li>
<li><a href="http://obofoundry.org/ontology/omit.html">Ontology for MIcroRNA Target Prediction (OMIT)</a> (<a href="https://pdfs.semanticscholar.org/a4d7/a797ab006aceb72ec52587c815c30c800de5.pdf">here</a>)</li>
<li><a href="https://www.researchgate.net/publication/256648393_%27ONSTR_The_Ontology_for_Newborn_Screening_Follow-up_and_Translational_Research%27">Ontology for Newborn Screening and Translational Research (ONSTR)</a></li>
<li><a href="https://github.com/lindenb/ngs-ontology">Ontology for Next Generation Sequencing Experiments (NGS Ontology)</a></li>
<li><a href="https://obofoundry.org/ontology/one.html">Ontology for Nutritional Epidemiology (ONE)</a></li>
<li><a href="https://genesandnutrition.biomedcentral.com/articles/10.1186/s12263-018-0601-y">Ontology for Nutritional Studies (ONS)</a></li>
<li><a href="http://www.referent-tracking.com/RTU/?page=projects.phtml#opmqol">Ontology for Pain and Related Disability, Mental Health and Quality of Life (OPMQoL)</a></li>
<li><a href="http://obofoundry.org/ontology/opl.html">Ontology for Parasite LifeCycle (OPL)</a></li>
<li><a href="http://www.jbiomedsem.com/content/6/1/30">Ontology for Periodontitis (PERIO)</a></li>
<li><a href="https://hozo.jp/ISWC2023_PD-Industry-proc/ISWC2023_paper_436.pdf">Ontology for Petroleum Production</a></li>
<li><a href="https://hozo.jp/ISWC2023_PD-Industry-proc/ISWC2023_paper_436.pdf">Ontology for Prognostic Health Management (PHM) in Spacecraft Avionics</a></li>
<li><a href="https://bioportal.bioontology.org/ontologies/ORCS">Ontology for Representing CDM Semantics (ORCS)</a></li>
<li><a href="https://bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-019-2723-7">Ontology for Stem Cell Investigations (OSCI)</a></li>
<li><a href="https://www.mdpi.com/2227-9717/12/3/597">Ontology for the Description of Scientific Research Data (Metadate4Ing)</a></li>
<li><a href="https://papers.phmsociety.org/index.php/phmconf/article/download/3195/phmc_22_3195">Ontology for the Documentation of Variable Selection and Data source Selection and Integration (OD-ATTEST)</a></li>
<li><a href="https://doi.org/10.1109/BIBM58861.2023.10385562">Ontology for the Study of Biofilms (BIFO)</a></li>
<li><a href="https://www.sciencedirect.com/science/article/pii/S0933365717301525">Ontology for Thoracentesis</a></li>
<li><a href="https://www.semantic-web-journal.net/system/files/swj3493.pdf">Ontology of Autonomous Driving Based on the SAE J3016 Standard</a></li>
<li><a href="http://obofoundry.org/ontology/oarcs.html">Ontology of Arthropod Circulatory Systems (OArCS)</a></li>
<li><a href="http://obofoundry.org/ontology/obcs.html">Ontology of Biological and Clinical Statistics (OBCS)</a></li>
<li><a href="https://bioportal.bioontology.org/ontologies/OBA">Ontology of Biological Attributes (OBA)</a></li>
<li><a href="https://link.springer.com/chapter/10.1007/978-3-031-75599-6_13">Ontology of Bipolar Disorders (OBD)</a></li>
<li><a href="http://ceur-ws.org/Vol-2137/ws_ONCONTO_paper_3.pdf">Ontology of Cancer Related Social-Ecological Variables (OCRSEV)</a></li>
<li><a href="https://arxiv.org/abs/1903.08523">Ontology of Card Sleights</a></li>
<li><a href="https://www.nature.com/articles/s41598-017-12580-4">Ontology of Cardiovascular Drug Adverse Events (OCVDAE)</a></li>
<li><a href="https://bioportal.bioontology.org/ontologies/OCMR">Ontology of Chinese Medicine for Rheumatism (OCMR)</a></li>
<li><a href="https://ce.google.com/archive/p/ontology-of-clinical-research/">Ontology of Clinical Research (OCRe)</a></li>
<li><a href="https://philarchive.org/archive/MERCCC">Ontology of Commercial Exchange (OCE)</a></li>
<li><a href="https://bioportal.bioontology.org/ontologies/ONTODM-CORE">Ontology of Core Data Mining Entities (OntoDM-CORE)</a></li>
<li><a href="https://www.sciencedirect.com/science/article/pii/S0020025515005800">Ontology of Datatypes (OntoDT)</a></li>
<li><a href="https://bioportal.bioontology.org/ontologies/ODAE">Ontology of Drug Adverse Events Events (ODAE)</a></li>
<li><a href="https://bioportal.bioontology.org/ontologies/ODNAE">Ontology of Drug Neuropathy Adverse Events (ODNAE)</a></li>
<li><a href="https://github.com/ontology-of-electronics">Ontology of Electronics (OOE)</a></li>
<li><a href="https://bioportal.bioontology.org/ontologies/OOEVV">Ontology of Experimental Variables and Values (OOEVV)</a></li>
<li><a href="http://obofoundry.org/ontology/ogg.html">Ontology of Genes and Genomes (OGG)</a></li>
<li><a href="https://bioportal.bioontology.org/ontologies/OGDI">Ontology of Genetic Disease Investigations (OGDI)</a></li>
<li><a href="https://1library.net/document/q5946wgz-hemocomponents-hemoderivatives-ontology-hemonto-ontology-blood-components.html">Ontology of Hemotherapy (HEMONTO)</a></li>
<li><a href="https://jbiomedsem.biomedcentral.com/articles/10.1186/s13326-019-0217-1">Ontology of Host-Microbe Interactions (OHMI)</a></li>
<li><a href="https://obofoundry.org/ontology/ohpi">Ontology of Host-Pathogen Interactions (OHPI)</a></li>
<li><a href="https://bioportal.bioontology.org/ontologies/OLAM">Ontology of Laboratory Animal Medicine (OLAM)</a></li>
<li><a href="http://rali.iro.umontreal.ca/rali/sites/default/files/publis/Levreault-MSc.pdf">Ontology of Medical Microbiology (OntoMic)</a></li>
<li><a href="http://obofoundry.org/ontology/omrse.html">Ontology of Medically Related Social Entities (OMRSE)</a></li>
<li><a href="http://obofoundry.org/ontology/omp.html">Ontology of Microbial Phenotypes (OMP)</a></li>
<li><a href="http://ceur-ws.org/Vol-1747/IT504_ICBO2016.pdf">Ontology of Organizational Structures of Trauma systems and Trauma centers (OOSTT)</a></li>
<li><a href="https://doi.org/10.1016/S2215-0366(22)00156-0">Ontology of Phenomenological Psychopathology (OPheP)</a></li>
<li><a href="https://bioportal.bioontology.org/ontologies/OPMI">Ontology of Precision Medicine and Investigation (OPMI)</a></li>
<li><a href="https://bioportal.bioontology.org/ontologies/ORNASEQ">Ontology of RNA Sequencing (ORNASEQ)</a></li>
<li><a href="http://arxiv.org/pdf/1501.02662.pdf">Ontology of Social Participation (OPS)</a></li>
<li><a href="https://onlinelibrary.wiley.com/doi/10.1111/add.16010">Ontology of Tobacco, Nicotine and Vaping Products</a></li>
<li><a href="https://www.sciencedirect.com/science/article/pii/S1877050919307380">Ontology of Systems Engineering</a></li>
<li><a href="http://obofoundry.org/ontology/ovae.html">Ontology of Vaccine Adverse Events (OVAE)</a></li>
<li><a href="https://openenergy-platform.org/ontology/oeo">Open Energy Ontology (OEO)</a></li>
<li><a href="https://link.springer.com/chapter/10.1007/978-3-030-82083-1_56">Open Model-Based Engineering Environment (OpenMBEE)</a></li>
<li><a href="https://jsou.libguides.com/ld.php?content_id=37534351">Operational Environment Ontology (OEO)</a></li>
<li><a href="https://arxiv.org/pdf/2211.11332">Optimization Algorithm Benchmarking Ontology (OPTION-ONTOLOGY)</a></li>
<li><a href="http://obofoundry.org/ontology/ohd.html">Oral Health and Disease Ontology (OHD)</a></li>
<li><a href="https://arc.aiaa.org/doi/10.2514/6.2024-0483">Orbital Verification Ontology Stack (OVOS)</a></li>
<li><a href="https://figshare.com/articles/presentation/An_Organization_Ontology_based_on_ROR/14839359">Organization Ontology Based on ROR</a></li>
<li><a href="https://www.politesi.polimi.it/bitstream/10589/195722/3/2022_10_Ghedini.pdf">ORMA+ Ontology for Reliability Centered Maintenance</a></li>
<li><a href="https://doi.org/10.1016/j.jbi.2023.104579">PACIFIC Cardiology Ontology </a></li>
<li><a href="http://bioportal.bioontology.org/ontologies/1335">Parasite Experiment Ontology (PEO)</a></li>
<li><a href="https://www.tandfonline.com/doi/abs/10.1080/0951192X.2017.1357837">Part-Focused Manufacturing Process Ontology (PMPO)</a></li>
<li><a href="https://bioportal.bioontology.org/ontologies/PHIPO">Pathogen Host Interaction Phenotype Ontology (PHIPO)</a></li>
<li><a href="http://person.hst.aau.dk/ska/MIE2015/Papers/SHTI210-0160.pdf">Patient Safetry Categorial Structure (PS-CAST)</a></li>
<li><a href="https://github.com/Display-Lab/psdo">Performance Summary Display Ontology (PSDO)</a></li>
<li><a href="http://books.google.com/books?id=XYOBAusxPCcC&pg=PA27&lpg=PA27&dq=bfo+ontology&source=bl&ots=4nFYXvfaMy&sig=xq4BZAmY8DH0J5DMj3DE_xB4Fes&hl=en&ei=ZFpjStvADMaltgem27SyAg&sa=X&oi=book_result&ct=result&resnum=2">Petrochemical Ontology</a></li>
<li><a href="https://github.com/Petroles/PetroNLP">PetroKGraph</a></li>
<li><a href="https://ceur-ws.org/Vol-2519/paper2.pdf">Petroleum Geoimage Ontology</a></li>
<li><a href="https://www.biorxiv.org/content/biorxiv/early/2018/08/13/390971.full.pdf">PGxO Pharmacogenomics Ontology</a></li>
<li><a href="http://obofoundry.org/ontology/pato.html">Phenotypic Quality Ontology (PaTO)</a>: qualities of biomedical entities</li>
<li><a href="https://doi.org/10.1109/SEGE55279.2022.9889768">Photovoltaic Ontology (PVO)</a></li>
<li><a href="https://www.tandfonline.com/doi/abs/10.1080/09544828.2019.1644301?journalCode=cjen20">Physics-Based Simulation Ontology (PSO-Physics and PSO-Sim)</a></li>
<li><a href="https://bioportal.bioontology.org/ontologies/PLANA">Planarian Anatomy and Developmental Stage Ontology (PLANA)</a></li>
<li><a href="https://bioportal.bioontology.org/ontologies/PLANP">Planarian Phenotype Ontology (PLANP)</a></li>
<li><a href="http://bioportal.bioontology.org/ontologies/PEAO">Plant Experimental Assay Ontology (PEAO)</a></li>
<li><a href="http://obofoundry.org/ontology/po.html">Plant Ontology (PO)</a></li>
<li><a href="https://bioportal.bioontology.org/ontologies/PPO">Plant Phenology Ontology (PPO)</a></li>
<li><a href="https://bioportal.bioontology.org/ontologies/PLANTSO">Plant Stress Ontology (PLANTSO)</a></li>
<li><a href="https://www-sciencedirect-com.gate.lib.buffalo.edu/science/article/pii/S0098300416308482">Plastic Rock Deformation (PRD) ontology</a></li>
<li><a href="https://onlinelibrary.wiley.com/doi/pdf/10.1002/adem.202402149">Platform Material Digital Core Ontology (PMDCo)</a></li>
<li><a href="https://bioportal.bioontology.org/ontologies/PNADO">Pneumonia Diagnosis Ontology (PNADO)</a></li>
<li><a href="https://www.researchgate.net/profile/Sabrina_Azzi/publication/328171801_Design_of_a_Pneumonia_Ontology_for_Diagnosis_Decision_Support_System/links/5bbcb970299bf1049b785032/Design-of-a-Pneumonia-Ontology-for-Diagnosis-Decision-Support-System.pdf">Pneumonia Ontology</a></li>
<li><a href="https://www.nature.com/articles/s41538-023-00221-2">PO2/TransformON</a></li>
<li><a href="https://www.researchgate.net/publication/332810691">POLARISC Emergency Response System Ontology</a></li>
<li><a href="https://ceur-ws.org/Vol-3760/paper6.pdf">Polymat (Polymer Membrance research) ontology</a></li>
<li><a href="https://www.sciencedirect.com/science/article/pii/S1569190X18301114">Ponte Ontology Platform (PONTE)</a></li>
<li><a href="http://obofoundry.org/ontology/pco.html">Population and Community Ontology (PCO)</a></li>
<li><a href="http://onlinelibrary.wiley.com/doi/10.1111/nyas.13271/full">Population Health Record (PopHR)</a></li>
<li><a href="http://obofoundry.org/ontology/poro.html">Porifera Ontology (PORO)</a></li>
<li><a href="http://journals.plos.org/plosone/article%3Fid%3D10.1371/journal.pone.0162828">Pre-Eclampsia Ontology (PEO)</a></li>
<li><a href="http://www.aimspress.com/fileOther/PDF/MBE/mbe-17-04-227.pdf">Precision Medicine Ontology (PMO)</a></li>
<li><a href="https://jbiomedsem.biomedcentral.com/articles/10.1186/s13326-019-0197-1">PreOptique Platform for Integrated Pre-surgery Reports</a></li>
<li><a href="https://pdfs.semanticscholar.org/7100/59ad86c5c2ef7a5b1430d30a8950a88aa319.pdf">Prescription of Drugs Ontology (PDRO)</a></li>
<li><a href="https://www.mdpi.com/2076-3417/13/23/12664">Printing Information Modelling Ontology (PIM-O)</a></li>
<li><a href="https://ascopubs.org/doi/pdfdirect/10.1200/CCI.20.00001">PRISM: A Platform for Imaging inPrecision Medicine</a></li>
<li><a href="https://www.sciencedirect.com/science/article/abs/pii/S0958694619300032">Process and Observation Ontology (PO2)</a></li>
<li><a href="https://github.com/proco-ontology/PROCO">Process Chemistry Ontology</a></li>
<li><a href="https://www.sciencedirect.com/science/article/pii/S0166361518301647">Product Life Cycle Ontology for Additive Manufacturing</a></li>
<li><a href="https://www.researchgate.net/profile/Gabriela-Henning/publication/372413019_Redefining_PRoduct_ONTOlogy_to_improve_intra_and_cross-domain_interoperability">PRoduct ONTOlogy (PRONTO)</a></li>
<li><a href="https://www.sciencedirect.com/science/article/abs/pii/S0166361522001269?via%3Dihub">Product Service System (PSS) Ontology</a></li>
<li><a href="https://code.google.com/p/proper-name-ontology">Proper Name Ontology (PNO)</a></li>
<li><a href="http://www.tara.tcd.ie/bitstream/handle/2262/86059/Final%20Version.pdf?sequence=1">PROSPECT-IDR: Personalised Prediction of Infectious Disease Risk</a></li>
<li><a href="https://ceur-ws.org/Vol-3726/paper4.pdf">Protein Conformation Ontology (PRC)</li>
<li><a href="http://obofoundry.org/ontology/pr.html">Protein Ontology (PRO)</a>: protein types and modifications classified on the basis of evolutionary relationships</li>
<li><a href="http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3106195">Protein-Ligand Interaction Ontology (PLIO)</a></li>
<li><a href="https://corescholar.libraries.wright.edu/cgi/viewcontent.cgi?article=1079&context=knoesis">Provenir ontology for provenance modeling</a></li>
<li><a href="https://bioportal.bioontology.org/ontologies/PCL">Provisional Cell Ontology (PCL)</a></li>
<li><a href="https://www.ida.org/-/media/feature/publications/p/pu/public-safety-and-emergency-management-communications-ontology/d-8583.ashx">Public Safety and Emergency Management (PS/EM) Communications Ontology</a></li>
<li><a href="https://ec.europa.eu/research/participants/documents/downloadPublic?documentIds=080166e5c077764d&appId=PPGMS">QROWD urban traffic and mobility ontology</a></li>
<li><a href="https://www.researchgate.net/publication/259759470">Quality of Service (QoS) Ontology</a></li>
<li><a href="https://bioportal.bioontology.org/ontologies/RBO">Radiation Biology Ontology (RBO)</a></li>
<li><a href="https://doi.org/10.1130/2022.2558(03)">Rare-Earth Elements (REE) Mineral System Ontology</a></li>
<li><a href="https://github.com/AleSteB/Reac4Cat/blob/main/reac4cat_with_examples.owl">Reactions and Catalysis (Reac4Cat) ontology</a></li>
<li><a href="https://www.tandfonline.com/doi/full/10.1080/00207543.2024.2360086">Reference Ontology for Expert-Bound Processes in Manufacturing (ROXANA)</a></li>
<li><a href="http://ceur-ws.org/Vol-3235/paper25.pdf">Reference Ontology for FISH (FAIR in vivo data Sharing platform)</a></li>
<li><a href="http://www.obofoundry.org/ontology/ro.html">Relations Ontology (RO)</a></li>
<li><a href="https://infoscience.epfl.ch/record/265908/files/">Reliability Assessment for Assembly Stations (RAAS) Ontology</a></li>
<li><a href="https://github.com/patriciaferreiradasilva/resriskonto">ReRiskOnto</a></li>
<li><a href="https://2023.eswc-conferences.org/wp-content/uploads/2023/05/paper_Karam_2023_A.pdf">Resilient Crisis-Relevant Supply Networks Ontology (ResKriVer)</a></li>
<li><a href="https://www.researchgate.net/profile/Samer-Chehade-2/publication/353571839">Rescue Ontology (ResOnt)</a></li>
<li><a href="https://doi.org/10.1017/S0269888921000096">RFID System Configuration Ontology (RFID SCO)</a></li>
<li><a href="http://obofoundry.org/ontology/rnao.html">RNA Ontology (RnaO)</a>: RNA features, interactions and motifs</li>
<li><a href="https://ceur-ws.org/Vol-3595/paper7.pdf">Robotic Capability Ontology (RCO)</a></li>
<li><a href="http://www.sciencedirect.com/science/article/pii/S0098300416308482">Rock Plastic Deformation (RPD) ontology</a></li>
<li><a href="https://bioportal.bioontology.org/ontologies/ROLEO">Role Ontology (ROLEO)</a></li>
<li><a href="https://www.researchgate.net/publication/332390146_ROMAIN_Towards_a_BFO_compliant_reference_ontology_for_industrial_maintenance">ROMAIN industrial maintenance ontology</a></li>
<li><a href="https://bmcbioinformatics.biomedcentral.com/articles/10.1186/1471-2105-11-302">Saliva Ontology (SALO)</a></li>
<li><a href="http://ceur-ws.org/Vol-1747/IP01_ICBO2016.pdf">Schistosomiasis Process Ontology (IDOSCHISTO)</a></li>
<li><a href="http://ceur-ws.org/Vol-1747/IT605_ICBO2016.pdf">Scientific Evidence and Provenance Information Ontology (SEPIO)</a></li>
<li><a href="https://www.semantic-web-journal.net/system/files/swj3755.pdf">Search engine Optimization Ontology (SEO)</a></li>
<li><a href="https://github.com/Sefaria/Sefaria-Project/wiki/Documentation-for-Topics-Hierarchy">Sefaria Topics</a></li>
<li><a href="https://www.sciencedirect.com/science/article/pii/S016926072300584">Semantic Common Data Model (SCDM)</a></li>
<li><a href="http://www.linked2safety-project.eu/node/44">Semantic Electronic Health Record (SEHR) Model</a> from <a href="http://www.linked2safety-project.eu/">Linked2Safety</a> (see also <a href="https://link.springer.com/article/10.1007/s12553-017-0188-0">here</a>)</li>
<li><a href="http://dl.acm.org/citation.cfm?id=2580238">Semantic Laminated Composites Knowledge management System (SLACKS)</a></li>
<li><a href="https://github.com/cpauloh/semmd">Semantic Materials Manufacturing Design (SEMMD) Ontology</a></li>
<li><a href="https://www.mdpi.com/2079-9292/10/20/2523">Semantic Reference Model for Individualization of Information Processes</a></li>
<li><a href="https://indico.esa.int/event/386/contributions/6243/attachments/4281/6391/1435%20-%20using%20semantic%20systems%20engineering%20techniques%20to%20verify%20the%20large%20aperture%20space%20telescope%20mission%20%E2%80%93%20current%20status.pdf">Semantic Systems Engineering Ontology (SESO)</a></li>
<li><a href="https://jbiomedsem.biomedcentral.com/articles/10.1186/2041-1480-5-14">Semanticscience Integrated Ontology (SIO)</a></li>
<li><a href="http://www.ncbi.nlm.nih.gov/pubmed/20006477">Senselab Ontology</a> with applications to <a href="http://senselab.med.yale.edu/neurondb/">NeuronDB</a> and <a href="https://groups.google.com/forum/#!topic/bfo-discuss/q0E1J27QvtI">BrainPharm</a></li>
<li><a href="http://ieeexplore.ieee.org/document/8232468/">Sentinel: Platform for Semantic Enrichment of Media Streams</a></li>
<li><a href="http://obofoundry.org/ontology/so.html">Sequence Ontology (SO)</a>: features and properties of nucleic sequences</li>
<li><a href="http://ceur-ws.org/Vol-2615/paper5.pdf">Shop-Floor Digital Twin (DT) ontology</a></li>
<li><a href="https://arxiv.org/pdf/2405.05413">Simple Standard for Sharing Ontological Mappings (SSSOM)</a></li>
<li><a href="https://arxiv.org/pdf/2006.01460.pdf">Situated and Interactive Multimodal Conversations</a></li>
<li><a href="http://link.springer.com/article/10.1007/s10489-016-0834-7">Situation Awareness Ontology (SAO)</a></li>
<li><a href="https://www.tandfonline.com/doi/abs/10.1080/13658816.2017.1309043?journalCode=tgis20">Sketch Map Ontology</a></li>
<li><a href="https://bioportal.bioontology.org/ontologies/SPO">Skin Physiology Ontology (SPO)</a></li>
<li><a href="https://bioportal.bioontology.org/ontologies/SDO">Sleep Domain Ontology (SDO)</a></li>
<li><a href="http://vocab.linkeddata.es/SMARTProtocols">SMART Protocols</a>: SeMAntic RepresenTation for Experimental Protocols</li>
<li><a href="https://icbo2021.inf.unibz.it/wp-content/uploads/2021/09/169_S1_ElGhosh_paper_8.pdf">Smart Ultrasound in Obstetrics and Gynecology (SUOG) Ontology</a></li>
<li><a href="https://bmcmedinformdecismak.biomedcentral.com/articles/10.1186/s12911-018-0651-5">SNOMED CT (SCT) Standard Ontology</a></li>
<li><a href="https://ojphi.jmir.org/2024/1/e52845">Social Determinants of Health Ontology (SDoHO)</a></li>
<li><a href="https://ubir.buffalo.edu/xmlui/handle/10477/79440">Social Psychology Ontology (SPO)</a></li>
<li><a href="https://www.exag.org/papers/An%20Executable%20Ontology%20for%20Social%20Simulation.pdf">Socialog Ontology for Social Simulation</a></li>
<li><a href="http://jbiomedsem.biomedcentral.com/articles/10.1186/2041-1480-5-25">Software Ontology (SWO)</a></li>
<li><a href="http://dspace.ucuenca.edu.ec/bitstream/123456789/28548/1/Trabajo%20de%20Titulaci%C3%B3n.pdf">Software, Disabilities and Competences Ontology (SODIC)</a></li>
<li><a href="https://www.biorxiv.org/content/10.1101/2023.02.03.526812v1.full.pdf">Soil Food Web Ontology</a></li>
<li><a href="https://philpapers.org/rec/COXTSD-2">Space Domain Ontologies (SDO)</a></li>
<li><a href="https://obofoundry.org/ontology/slso.html">Space Life Sciences Ontology (SLSO)</a></li>
<li><a href="https://ieeexplore.ieee.org/document/7527882">Space Object Ontology (SOO)</a></li>
<li><a href="http://www.semantic-web-journal.net/system/files/swj1582.pdf">Spatial Graph Adapter (SGA) Ontology Design Pattern</a></li>
<li><a href="http://ceur-ws.org/Vol-2728/paper3.pdf">Spatial Relation Ontology</a></li>
<li><a href="http://www.geo.uzh.ch/dam/jcr:6c3c9ef3-6bcd-4300-86e4-9de07d3f6f37/msc_felix_gantner_2011.pdf">Spatiotemporal Ontology for the Administrative Units of Switzerland (SONADUS)</a></li>
<li><a href="http://ceur-ws.org/Vol-808/STIDS2011_CR_P2_WardEtAl.pdf">Special Nuclear Materials Detection Ontology (SNM-DO)</a></li>
<li><a href="http://obofoundry.org/ontology/stato.html">Statistics Ontology (STATO)</a></li>
<li><a href="https://www.nature.com/articles/s41597-020-0409-7">STATO-LMM Linear Mixed Model Ontology</a></li>
<li><a href="https://wellcomeopenresearch.org/articles/8-456">Style of Delivery Ontology</a></li>
<li><a href="http://obofoundry.org/ontology/sao.html">Subcellular Anatomy Ontology (SAO)</a></li>
<li><a href="http://obofoundry.org/ontology/sopharm.html">Suggested Ontology for Pharmacogenomics (SO-Pharm)</a></li>
<li><a href="https://link.springer.com/chapter/10.1007/978-3-031-71637-9_21#Sec11">Supply and Demand Open Knowledge Network (SUDOKN) ontology</a></li>
<li><a href="https://asmedigitalcollection.asme.org/computingengineering/article-abstract/22/5/051002/1139465/Enabling-Traceability-in-Agri-Food-Supply-Chains">Supply Chain Traceability Ontology</a></li>
<li><a href="https://www.usgs.gov/media/files/surface-water-ontology">Surface Water Ontology (SWO)</a></li>
<li><a href="https://www.scitepress.org/papers/2017/65827/65827.pdf">Survey Ontology</a></li>
<li><a href="https://github.com/gioUbbiali/Sustainability-Core-Ontology">Sustainability Core Ontology (SCO)</a></li>
<li><a href="https://github.com/hbabaie1/Sustainable-Development-and-Climate-SDC-ontology">Sustainable Development and Climate (SDC) Ontology</a></li>
<li><a href="https://e-hir.org/upload/pdf/hir-2022-28-4-332.pdf">Symptomatic Treatment of Multiple Sclerosis Ontology (STMSO)</a></li>
<li><a href="http://users.cs.cf.ac.uk/I.Spasic/trak">Taxonomy for Rehabilitation of Knee Conditions (TRAK)</a></li>
<li><a href="https://doi.org/10.1007/s12565-024-00759-5">Terminologia Anatomica Humana</a></li>
<li><a href="https://terms4fairskills.github.io/">terms4FAIRskills (T4FS)</a></li>
<li><a href="https://github.com/CRO-ontology/CRO">The Common Rule Ontology (CRO)</a></li>
<li><a href="https://www.mdpi.com/2409-9287/4/3/40">The Trope Ontology</a></li>
<li><a href="https://bioportal.bioontology.org/ontologies/TEO">Time Event Ontology (TEO)</a></li>
<li><a href="https://docs.google.com/document/d/1iArQNIJrJ02n8KRQXlriG2mxkQVNBWzM/edit">Tissue and Organ Transplant Ontology (TOTO)</a></li>
<li><a href="http://www.obofoundry.org/ontology/txpo.html">Toxic Process Ontology (TXPO)</a></li>
<li><a href="https://arc.aiaa.org/doi/abs/10.2514/6.2019-1032">Trade-Space Analysis Tool for Constellations (TAT-C) ontology</a></li>
<li><a href="https://www.hindawi.com/journals/ecam/2021/6637810/">Traditional Chinese Drugs Ontology (TCDO)</a></li>
<li><a href="http://esw.w3.org/topic/HCLSIG/PharmaOntology">Translational Medicine Ontology (TMO)</a></li>
<li><a href="http://www.ontobee.org/ontology/TSO">Transportation System Ontology</a></li>
<li><a href="https://www.linkedin.com/pulse/pioneering-real-estate-ontological-hyper-automation-tavi-truman-ffyzc/">TruSpark Hyper-Automation Platform</a></li>
<li><a href="https://jbiomedsem.biomedcentral.com/articles/10.1186/s13326-016-0106-9">Tumour-Node-Metastasis Ontology (TNM-O)</a></li>
<li><a href="https://bioportal.bioontology.org/ontologies/UBERON">Uber Anatomy Ontology (UBERON)</a></li>
<li><a href="https://www.mdpi.com/2079-8954/6/4/46/pdf">UMass Engineering Core Ontologies</a></li>
<li><a href="https://iswc2017.ai.wu.ac.at/wp-content/uploads/papers/MainProceedings/179.pdf">United Nations SDG (Sustainable Development Goals) Ontology Framework</a></li>
<li><a href="https://unsceb-hlcm.github.io/onto-undo/">United Nations System Document Ontology (ONTO-UNDO)</a></li>
<li><a href="http://sunsite.informatik.rwth-aachen.de/Publications/CEUR-WS/Vol-555/paper5.pdf">Universal Core Semantic Layer</a></li>
<li><a href="http://jbiomedsem.biomedcentral.com/articles/10.1186/s13326-016-0062-4">Vaccination Informed Consent Ontology (VICO)</a></li>
<li><a href="https://bioportal.bioontology.org/ontologies/VIO">Vaccine Investigation Ontology (VIO)</a></li>
<li><a href="http://obofoundry.org/ontology/vo.html">Vaccine Ontology (VO)</a></li>
<li><a href="https://era.library.ualberta.ca/items/5ad997be-0f3d-4456-8108-b3c69d851a98/view/060e801a-92a5-44ac-ba8a-0a00ab22765e/Abdelghani_Mohammad_202101_PhD.pdf">Value Stream Mapping (VSM) Ontology</a></li>
<li><a href="https://monarch-initiative.github.io/vertebrate-breed-ontology/">Vertebrate Breed Ontology (VBO)</a></li>
<li><a href="https://matportal.org/ontologies/VTO">Vickers Test Ontology (VTO)</a></li>
<li><a href="https://bioportal.bioontology.org/ontologies/VDOT">Viral Disease Ontology Trunk (VDOT)</a></li>
<li><a href="https://doi.org/10.1016/j.aei.2024.102747">Virtual Entity (VE) Ontology</a></li>
<li><a href="https://matportal.org/ontologies/VIMMP_ONTOLOGIES">Virtual Materials Marketplace (VIMMP) Ontologies</a></li>
<li><a href="https://bioportal.bioontology.org/ontologies/VIDO">Virus Infectious Disease Ontology (VIDO)</a></li>
<li><a href="https://data.uni-hannover.de/dataset/visual-inspection-ontology">Visual Inspection Ontology (VIO)</a></li>
<li><a href="https://bmcmedinformdecismak.biomedcentral.com/articles/10.1186/s12911-018-0634-6">Visualized Emotion Ontology (VEO)</a></li>
<li><a href="http://ontology.buffalo.edu/smith/articles/Vital_Sign_Ontology.pdf">Vital Sign Ontology (VSO)</a></li>
<li><a href="https://doi.org/10.1016/j.knosys.2023.110645">Vector-Borne Disease (VBD) Ontology</a></li>
<li><a href="https://bioportal.bioontology.org/ontologies/EUPATH">VEuPathDB Ontology (EUPATH)</a></li>
<li><a href="https://openreview.net/forum?id=SkgyVa-coV">VIVO Ontology</a></li>
<li><a href="https://bioportal.bioontology.org/ontologies/VIVO-ISF">VIVO-Integrated Semantic Framework (VIVO-ISF)</a></li>
<li><a href="https://scholarworks.gsu.edu/cgi/viewcontent.cgi?article=1124&context=geosciences_theses">Volcanism Ontology (VO)</a></li>
<li><a href="https://www.tandfonline.com/doi/full/10.1080/17538947.2023.2220620">Wetland Monitoring Ontology (WMO)</a></li>
<li><a href="https://github.com/standardgalactic/WindTurbineProject">Wind Turbine Project</a></li>
<li><a href="https://bmcmedinformdecismak.biomedcentral.com/articles/10.1186/s12911-024-02509-z">Women with Epilepsy of Child-Bearing Age Ontology (WWECA)</a></li>
<li><a href="http://obofoundry.org/ontology/xao.html">Xenopus Anatomy Ontology (XAO)</a></li>
<li><a href="https://www.biorxiv.org/content/biorxiv/early/2021/11/13/2021.11.12.467727.full.pdf">Xenopus Phenotype Ontology (XPO)</a></li>
<li><a href="http://www2007.org/workshops/paper_130.pdf">yOWL</a>: ontology-driven knowledge base for yeast biologists</li>
<li><a href="https://ieeexplore.ieee.org/abstract/document/9627248">ZEMELA Intelligent Agriculture Platform</a></li>
</ol>
</ul>
<h3>
Institutions, Groups and Projects
</h3>
<ul>
<ol>
<li><a href="https://www.afrl.af.mil">Air Force Research Laboratory, Rome, New York</a></li>
<li><a href="https://www.allotrope.org/">Allotrope Foundation: Rethinking Scientific Data</a></li>
<li><a href="https://www.arlis.org/">Arlis</a></li>
<li><a href="http://www.astrazeneca.com/">AstraZeneca</a></li>
<li><a href="https://www.salary.com/job/astrion/ontology-data-architect/j202401041929488109435">Astrion</a></li>
<li>Bentley Software, Inc.</li>
<li><a href="http://berkeleybop.org/">Berkeley Bioinformatics Open-Source Projects (BBOP)</a></li>
<li><a href="http://bike.snu.ac.kr/">Biomedical Knowledge Engineering Lab at Seoul National University (SNU BiKE)</a></li>
<li><a href="https://medicine.uams.edu/dbmi/research-labs/boar/">Biomedical Ontologies, University of Arkansas, Medical Center, Little Rock</a></li>
<li><a href="https://www.boeing.com/">Boeing</a></li>
<li><a href="https://pubmed.ncbi.nlm.nih.gov/24234915/">Brain Operation Database (BODB)</a></li>
<li><a href="https://www.slideshare.net/camsemantics/transforming-data-management-and-time-to-insight-with-anzo-smart-data-lake">Cambridge Semantics</a></li>
<li><a href="https://mie.umass.edu/e-design-center">Center for e-Design</a></li>
<li><a href="https://www.certus.com/">Certus</a></li>
<li><a href="http://kerfors.blogspot.com"> Clinical Information Science</a> (see also <a href="http://kerfors.blogspot.com"> here</a>)</li>
<li><a href="https://www.cranfield.ac.uk/"></a>Cranfield University, Bedfordshire, UK</a></li>
<li><a href="http://www.ctsaconnect.org/">CTSAconnect</a></li>
<li><a href="http://www.cubrc.org/index.php/data-science-and-information-fusion/ontology/'94">CUBRC</a></li>
<li><a href="http://rs.tdwg.org/dwc">Darwin Core (DwC)</a> (see also <a href="http://www.standardsingenomics.com/content/pdf/1944-3277-9-17.pdf">here</a>)</li>
<li><a href="https://www.decisym.ai/">DeciSym</a></li>
<li><a href="https://medicine.buffalo.edu/departments/biomedical-informatics/divisions/biomedical-ontology.html">Division of Biomedical Ontology</a>
at the<a href="https://medicine.buffalo.edu/departments/biomedical-informatics.html">University at Buffalo Department of Biomedical Informatics</a></li>
<li><a href="http://www.doqs.com/">DOQS</a>: Data-Oriented Quality Solutions</li>
<li><a href="http://rportal.lib.ntnu.edu.tw/">DSpace at NTNUA</a></li>
<li><a href="https://carleton.ca/biology/people/michel-dumontier/">Dumontier Lab</a></li>
<li><a href="https://people.epfl.ch/cgi-bin/people?id=105551&lang=en&cvlang=en">Ecole polytechnique federale de Lausanne (EPFL)</a></li>
<li><a href="http://www.elsevier.com/wps/find/authored_newsitem.cws_home/companynews05_01849">Elsevier Smart Content Strategy</a></li>
<li><a href="http://www.enanomapper.net/">eNanoMapper</a></li>
<li><a href="http://www.aifb.kit.edu/images/e/e5/Sfb-infrastructure-spie2016.pdf">Extensible Neuroimaging Archive Toolkit (XNAT)</a></li>
<li><a href="https://improvado.io/">Improvado</a></li>
<li><a href="https://www.incose.org/communities/working-groups-initiatives/digital-engineering-information-exchange">Incose Digital Engineering Working Group</a></li>
<li><a href="http://www.fludb.org/brc/home.spg?decorator=influenza">Influenza Research Database (IRD)</a></li>
<li><a href="https://www.inria.fr/en/centre-inria-nancy-grand-est">INRIA Lorraine Research Unit</a></li>
<li><a href="http://www.ida.org/">Institute for Defense Analysis</a></li>
<li><a href="https://www.inf.ufrgs.br/site/en/">Institute of Informatics, Federal University of Rio Grande do Sul, Porto Alegre, Brazil</a></li>
<li><a href="http://www.jaist.ac.jp/ks/english/">Japan Advanced Institute of Science and Technology (JAIST)</a></li>
<li><a href="http://www.jhuapl.edu/">Johns Hopkins University Applied Physics Lab</a></li>
<li><a href="https://kadsci.com/">KadSci</a></li>
<li><a href="http://www.med.kobe-u.ac.jp/">Kobe University, Graduate School of Medicine, Department of Sociomedical Informatics</a></li>
<li><a href="https://www.data-tactics.com/">L3 Data Tactics Corporation</a> (see also <a href="http://ceur-ws.org/Vol-808/STIDS2011_CR_T1_SalmenEtAl.pdf">here</a>)</li>
<li><a href="http://www.landcglobal.com/">Language and Computing</a> Bought by <a href="http://www.nuance.com/index.htm">Nuance</a></li>
<li><a href="https://libryo.com/">libryo</a></li>
<li><a href="http://user.medunigraz.at/stefan.schulz">Medical University Graz - Institute of Medical Informatics, Statistics and Documentation</a></li>
<li><a href="http://www.infofusion.buffalo.edu/">National Center for Multi-Source Information Fusion</a></li>
<li><a href="http://www.ontocat.org/">OntoCAT</a></li>
<li><a href="http://ontobat.hegroup.org/">OntoCOG</a></li>
<li><a href="http://www.referent-tracking.com/RTU/"> University at Buffalo Referent Tracking Unit</a></li>
<li><a href="http://www.openphacts.org/">Open PHACTS</a></li>
<li><a href="http://www.openehr.org/wiki/display/ontol/Ontologies+Home">openEHR</a></li>
<li><a href="https://www.youtube.com/watch?v=WKuK2G-NUk8">OSTHUS</a></li>
<li><a href="https://www.sciencedirect.com/science/article/abs/pii/S092180092300339">Patagonia Purpose Trust</a></li>
<li><a href="https://petrobras.com.br/en/home-petrobras">Petrobras</a></li>
<li><a href="http://www.infor-med.com/downloads/articles_downloads/Praxis_EMR_SUNY_Interoperability_Project.pdf">Praxis</a>: EMR research on interoperability and query of clinical records</li>
<li><a href="https://teamraft.com/">Raft</a></li>
<li><a href="https://www.rtx.com/who-we-are/what-we-do/flight">Raytheon Technologies (RTX)</a></li>
<li><a href="https://www.roche.com/">Roche</a></li>
<li><a href="https://www.rocketurbiz.com/">RocketUrBiz</a></li>
<li><a href="https://pubmed.ncbi.nlm.nih.gov/21057717/">REMINE</a></li>
<li><a href="http://www.saitama-u.ac.jp/">Saitama University - Faculty of Liberal Arts</a> (see also <a href="http://www.kyy.saitama-u.ac.jp/~kachi/RealOnt.pdf">here</a>)</li>
<li><a href="https://www.saic.com/">Science Applications International Corporation (SAIC)</a></li>
<li><a href="https://www.sciencecast.org/">ScienceCast</a></li>
<li><a href="http://www.securboration.com/">Securboration</a></li>
<li><a href="https://www.semanticarts.com/a-bfo-ready-version-of-gist/">Semantic Arts</a></li>
<li><a href="https://www.scania.com/">Scania</a></li>
<li><a href="http://www.sciencecommons.org/">Science Commons</a></li>
<li><a href="https://sks.ai/">Summit Knowledge Solutions</a></li>
<li><a href="http://www.sciencecommons.org/projects/data/">Neurocommons</a></li>
<li><a href="http://www.swat4ls.org/wp-content/uploads/2015/10/SWAT4LS_2015_paper_15.pdf">SMART Protocols</a></li>
<li><a href="https://www.thermofisher.com/us/en/home.html">Thermo Fisher Scientific</a></li>
<li><a href="http://basic-formal-ontology.org/www.tradoc.army.mil/g2/oetsc/videoTBOC_flv.aspx">TRADOC Operational Environment Center</a></li>
<li><a href="https://www.usgs.gov/search?keywords=ontology">U.S. Geological Survey (USGS) - Center of Excellence for Geospatial Information Science (CEGIS)</a></li>
<li><a href="https://iafastro.directory/iac/paper/id/88366/abstract-pdf/IAC-24,D5,2,8,x88366.brief.pdf?2024-03-27.10:50:16">University of Arizona Stack (UOAS)</a></li>
<li><a href="http://biomedical.cis.usouthal.edu/">University of South Alabama - School of Computing - South Biomedical Informatics (SBI) Research Group</a> (see also <a href="http://www.cis.usouthal.edu/~huang/papers/BIBM-13-1.pdf">here</a> )</li>
<li><a href="http://www.utsouthwestern.edu/">University of Texas Southwestern Medical Center</a> (see also <a href="http://profiles.utsouthwestern.edu/profile/120432/lindsay-cowell.html">here</a> )</li>
<li><a href="http://sig.biostr.washington.edu/">University of Washington - Structural Informatics Group (SIG)</a></li>
<li><a href="https://www.viprbrc.org/brc/home.spg?decorator=vipr">Virus Pathogen Resource (ViPR)</a></li>
<li><a href="http://vivoweb.org/">VIVO</a>: An interdisciplinary national network enabling collaboration and discovery between scientists</li>
<li><a href="http://volley.com/">Volley: AI-powered learning hub</a></li>
<li><a href="https://www.wti-solutions.com/data-fusion/">WTI Solutions</a></li>
</ol>
</ul>
<h3>
Good Ontology Design (GoodOD)
</h3>
<ul>
<li><a href="Groups and Projects">Department of Defence and Intelligence Community Ontology Working Group (DIOWG)</a></li>
<li><a href="https://www.nga.mil/">National Geospatial-Intelligence Agency (NGA)</a></li>
</ul>
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