build.yaml

name: Python package

on: [push]

jobs:
  build:
    runs-on: ubuntu-latest
    timeout-minutes: 60
    strategy:
      matrix:
        python-version: ["3.11"]
    concurrency:
      group: ci-${{ github.ref }}
      cancel-in-progress: true
    
    defaults:
      run:
        shell: bash -l {0}

    steps:
    - uses: actions/checkout@v2
    
    - uses: conda-incubator/setup-miniconda@v2
      with:
        miniconda-version: "latest"
        mamba-version: "*"
        environment-file: conda/dev.yaml
        channels: conda-forge,nodefaults
        activate-environment: pyreaddbc
        use-mamba: true
        miniforge-variant: Mambaforge
    
    - name: Install dependencies
      run: |
        # poetry config experimental.new-installer false
        poetry config virtualenvs.create false
        poetry build
        poetry install

    - name: Lint with flake8
      run: |
        # stop the build if there are Python syntax errors or undefined names
        flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics
        # exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide
        flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics

    - name: Test with pytest
      run: |
        poetry run pytest -vv -k "ZIKABR21 or STPI2206 or sids" tests/