Merge pull request #9 from ASaiM/fix_data_manager

Fixing data manager

Dockerfile

@@ -1,5 +1,5 @@
 # Galaxy - ASaiM
-FROM bgruening/galaxy-stable:17.09
+FROM quay.io/bgruening/galaxy:17.09
 
 MAINTAINER Bérénice Batut, [email protected]
 

config/data_managers.yaml

@@ -12,7 +12,7 @@ data_managers:
         - qiime_taxonomy
         - qiime_trees
 
-    - id: toolshed.g2.bx.psu.edu/repos/rnateam/data_manager_sortmerna_database_downloader/data_manager_sortmerna_download/2.1b.0
+    - id: toolshed.g2.bx.psu.edu/repos/rnateam/data_manager_sortmerna_database_downloader/data_manager_sortmerna_download/2.1b.1
       params:
         - '': '{{ item }}'
       items:
@@ -29,7 +29,7 @@ data_managers:
       data_table_reload:
         - metaphlan2_database
 
-    - id: toolshed.g2.bx.psu.edu/repos/iuc/data_manager_humann2_database_downloader/data_manager_humann2_download/0.9.9
+    - id: toolshed.g2.bx.psu.edu/repos/iuc/data_manager_humann2_database_downloader/data_manager_humann2_download/0.11.1.0
       # HUMAnN2 database: Nucleotide database: full chocophlan
       params:
         - 'db|database': 'chocophlan'
@@ -39,7 +39,7 @@ data_managers:
       data_table_reload:
         - humann2_nucleotide_database
 
-    - id: toolshed.g2.bx.psu.edu/repos/iuc/data_manager_humann2_database_downloader/data_manager_humann2_download/0.9.9
+    - id: toolshed.g2.bx.psu.edu/repos/iuc/data_manager_humann2_database_downloader/data_manager_humann2_download/0.11.1.0
       # HUMAnN2 database: Protein database: full uniref50
       params:
         - 'db|database': 'uniref'
@@ -49,7 +49,7 @@ data_managers:
       data_table_reload:
         - humann2_protein_database
 
-    #- id: toolshed.g2.bx.psu.edu/repos/iuc/data_manager_humann2_database_downloader/data_manager_humann2_download/0.9.9
+    #- id: toolshed.g2.bx.psu.edu/repos/iuc/data_manager_humann2_database_downloader/data_manager_humann2_download/0.11.1.0
     #  # HUMAnN2 database: Protein database: full uniref90
     #  params:
     #    - 'db|database': 'uniref'