From a62242f824be474e0811c620812f0fa4822fffc9 Mon Sep 17 00:00:00 2001 From: Francesco Murdaca Date: Fri, 12 Feb 2021 16:02:53 +0100 Subject: [PATCH] Add notebook dependencies in notebooks and overlays matchin notebook kernels and dependencies using jupyterlab-requirements (#68) * Add notebook dependencies and overlays created Signed-off-by: Francesco Murdaca * Add overlyas Signed-off-by: Francesco Murdaca * Update .thoth.yaml Signed-off-by: Francesco Murdaca --- .thoth.yaml | 4 +- Pipfile | 1 + Pipfile.lock | 1233 ++++++++++++++++++++++-- notebooks/download_dataset.ipynb | 11 +- notebooks/test_deployed_model.ipynb | 10 +- notebooks/training.ipynb | 10 +- overlays/download_dataset/Pipfile | 10 + overlays/download_dataset/Pipfile.lock | 220 +++++ overlays/test_model/Pipfile | 14 + overlays/test_model/Pipfile.lock | 553 +++++++++++ overlays/training/Pipfile | 15 + overlays/training/Pipfile.lock | 584 +++++++++++ 12 files changed, 2574 insertions(+), 91 deletions(-) create mode 100644 overlays/download_dataset/Pipfile create mode 100644 overlays/download_dataset/Pipfile.lock create mode 100644 overlays/test_model/Pipfile create mode 100644 overlays/test_model/Pipfile.lock create mode 100644 overlays/training/Pipfile create mode 100644 overlays/training/Pipfile.lock diff --git a/.thoth.yaml b/.thoth.yaml index 89d5c66..0a36b11 100644 --- a/.thoth.yaml +++ b/.thoth.yaml @@ -3,7 +3,7 @@ tls_verify: true requirements_format: pipenv runtime_environments: - - name: processing + - name: download_dataset operating_system: name: rhel version: "8" @@ -17,7 +17,7 @@ runtime_environments: python_version: "3.8" recommendation_type: performance - - name: inference + - name: test_model operating_system: name: rhel version: "8" diff --git a/Pipfile b/Pipfile index b348986..30acf41 100644 --- a/Pipfile +++ b/Pipfile @@ -14,6 +14,7 @@ prometheus-flask-exporter = "*" boto3 = "*" [dev-packages] +jupyterlab-requirements = ">=0.3.5" flake8 = "*" coverage = "*" Sphinx = "*" diff --git a/Pipfile.lock b/Pipfile.lock index 0b4aefe..50c1a8d 100644 --- a/Pipfile.lock +++ b/Pipfile.lock @@ -1,7 +1,7 @@ { "_meta": { "hash": { - "sha256": "85d4918854a1d4d44bfe1766445b09d807adb06dea8d09d3c66cf57a5756a440" + "sha256": "9c470f6ebf4dc2abd83b869ed47a6c98dad5096382ab54f93c165f35dd026e76" }, "pipfile-spec": 6, "requires": { @@ -32,23 +32,26 @@ }, "boto3": { "hashes": [ - "sha256:d6aafb804fca2b67c65dda78ad8b4afed901e004071208b84c804d345ad9ebba" + "sha256:bb2e16b0b8c13d47bc5d7b64a90bfa1310f4f2b524bdd3dcfe9237ddf243554d", + "sha256:f9d940f40c0302493466a20e716a23fa942b8e865dda4ebbca5e4fa3f5ca9635" ], "index": "pypi", - "version": "==1.17.5" + "version": "==1.17.6" }, "botocore": { "hashes": [ - "sha256:04a1df759681f5f171accb354d863bfed0774d64a4e8ee35ff49835755660a4e", - "sha256:3c55f0db5e08920727f4fa24a87aed60060643f4b0b5665c62ec762f79e82d6b" + "sha256:39832e4732fcdc897e1b1a50474251c7d3218029a902634a876364c223ca2432", + "sha256:7d04cd042ac01e08463dcbe520835d02f414ba431a43e4b4035bd2d0531b66a0" ], - "version": "==1.20.5" + "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3, 3.4, 3.5'", + "version": "==1.20.6" }, "cachetools": { "hashes": [ "sha256:1d9d5f567be80f7c07d765e21b814326d78c61eb0c3a637dffc0e5d1796cb2e2", "sha256:f469e29e7aa4cff64d8de4aad95ce76de8ea1125a16c68e0d93f65c3c3dc92e9" ], + "markers": "python_version ~= '3.5'", "version": "==4.2.1" }, "certifi": { @@ -63,6 +66,7 @@ "sha256:0d6f53a15db4120f2b08c94f11e7d93d2c911ee118b6b30a04ec3ee8310179fa", "sha256:f864054d66fd9118f2e67044ac8981a54775ec5b67aed0441892edb553d21da5" ], + "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3, 3.4'", "version": "==4.0.0" }, "click": { @@ -70,6 +74,7 @@ "sha256:d2b5255c7c6349bc1bd1e59e08cd12acbbd63ce649f2588755783aa94dfb6b1a", "sha256:dacca89f4bfadd5de3d7489b7c8a566eee0d3676333fbb50030263894c38c0dc" ], + "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3, 3.4'", "version": "==7.1.2" }, "cycler": { @@ -84,6 +89,7 @@ "sha256:4efa1ae2d7c9865af48986de8aeb8504bf32c7f3d6fdc9353d34b21f4b127060", "sha256:8a4fdd8936eba2512e9c85df320a37e694c93945b33ef33c89946a340a238557" ], + "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3, 3.4'", "version": "==1.1.2" }, "flask-cors": { @@ -106,20 +112,23 @@ "sha256:8f46f5be57ae6889a4e16e2ca113b1703ef17f2b0abceb83793eaba9e1351a45", "sha256:b881ef288a49aa81440d2c5eb8aeefd4c2bb8993d5f50edae7413a85bfdb3b57" ], + "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3'", "version": "==0.3.3" }, "google-auth": { "hashes": [ - "sha256:008e23ed080674f69f9d2d7d80db4c2591b9bb307d136cea7b3bc129771d211d", - "sha256:514e39f4190ca972200ba33876da5a8857c5665f2b4ccc36c8b8ee21228aae80" + "sha256:1b461d079b5650efe492a7814e95c536ffa9e7a96e39a6d16189c1604f18554f", + "sha256:8ce6862cf4e9252de10045f05fa80393fde831da9c2b45c39288edeee3cde7f2" ], - "version": "==1.25.0" + "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3, 3.4, 3.5'", + "version": "==1.26.1" }, "google-auth-oauthlib": { "hashes": [ "sha256:65b65bc39ad8cab15039b35e5898455d3d66296d0584d96fe0e79d67d04c51d9", "sha256:d4d98c831ea21d574699978827490a41b94f05d565c617fe1b420e88f1fc8d8d" ], + "markers": "python_version >= '3.6'", "version": "==0.4.2" }, "google-pasta": { @@ -221,21 +230,15 @@ "sha256:b307872f855b18632ce0c21c5e45be78c0ea7ae4c15c828c20788b26921eb3f6", "sha256:b97d804b1e9b523befed77c48dacec60e6dcb0b5391d57af6a65a312a90648c0" ], + "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3'", "version": "==2.10" }, - "importlib-metadata": { - "hashes": [ - "sha256:ace61d5fc652dc280e7b6b4ff732a9c2d40db2c0f92bc6cb74e07b73d53a1771", - "sha256:fa5daa4477a7414ae34e95942e4dd07f62adf589143c875c133c1e53c4eff38d" - ], - "markers": "python_version < '3.8'", - "version": "==3.4.0" - }, "itsdangerous": { "hashes": [ "sha256:321b033d07f2a4136d3ec762eac9f16a10ccd60f53c0c91af90217ace7ba1f19", "sha256:b12271b2047cb23eeb98c8b5622e2e5c5e9abd9784a153e9d8ef9cb4dd09d749" ], + "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3'", "version": "==1.1.0" }, "jinja2": { @@ -243,6 +246,7 @@ "sha256:03e47ad063331dd6a3f04a43eddca8a966a26ba0c5b7207a9a9e4e08f1b29419", "sha256:a6d58433de0ae800347cab1fa3043cebbabe8baa9d29e668f1c768cb87a333c6" ], + "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3, 3.4'", "version": "==2.11.3" }, "jmespath": { @@ -250,6 +254,7 @@ "sha256:b85d0567b8666149a93172712e68920734333c0ce7e89b78b3e987f71e5ed4f9", "sha256:cdf6525904cc597730141d61b36f2e4b8ecc257c420fa2f4549bac2c2d0cb72f" ], + "markers": "python_version >= '2.6' and python_version not in '3.0, 3.1, 3.2, 3.3'", "version": "==0.10.0" }, "keras-preprocessing": { @@ -294,6 +299,7 @@ "sha256:f8d6f8db88049a699817fd9178782867bf22283e3813064302ac59f61d95be05", "sha256:fd34fbbfbc40628200730bc1febe30631347103fc8d3d4fa012c21ab9c11eca9" ], + "markers": "python_version >= '3.6'", "version": "==1.3.1" }, "markdown": { @@ -301,6 +307,7 @@ "sha256:5d9f2b5ca24bc4c7a390d22323ca4bad200368612b5aaa7796babf971d2b2f18", "sha256:c109c15b7dc20a9ac454c9e6025927d44460b85bd039da028d85e2b6d0bcc328" ], + "markers": "python_version >= '3.6'", "version": "==3.3.3" }, "markupsafe": { @@ -358,6 +365,7 @@ "sha256:e8313f01ba26fbbe36c7be1966a7b7424942f670f38e666995b88d012765b9be", "sha256:feb7b34d6325451ef96bc0e36e1a6c0c1c64bc1fbec4b854f4529e51887b1621" ], + "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3'", "version": "==1.1.1" }, "matplotlib": { @@ -428,6 +436,7 @@ "sha256:dbd18bcf4889b720ba13a27ec2f2aac1981bd41203b3a3b27ba7a33f88ae4827", "sha256:df609c82f18c5b9f6cb97271f03315ff0dbe481a2a02e56aeb1b1a985ce38e60" ], + "markers": "python_version >= '3.6'", "version": "==1.19.5" }, "oauthlib": { @@ -435,6 +444,7 @@ "sha256:bee41cc35fcca6e988463cacc3bcb8a96224f470ca547e697b604cc697b2f889", "sha256:df884cd6cbe20e32633f1db1072e9356f53638e4361bef4e8b03c9127c9328ea" ], + "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3'", "version": "==3.1.0" }, "opt-einsum": { @@ -442,37 +452,32 @@ "sha256:2455e59e3947d3c275477df7f5205b30635e266fe6dc300e3d9f9646bfcea147", "sha256:59f6475f77bbc37dcf7cd748519c0ec60722e91e63ca114e68821c0c54a46549" ], + "markers": "python_version >= '3.5'", "version": "==3.3.0" }, "pandas": { "hashes": [ - "sha256:0a643bae4283a37732ddfcecab3f62dd082996021b980f580903f4e8e01b3c5b", - "sha256:0de3ddb414d30798cbf56e642d82cac30a80223ad6fe484d66c0ce01a84d6f2f", - "sha256:19a2148a1d02791352e9fa637899a78e371a3516ac6da5c4edc718f60cbae648", - "sha256:21b5a2b033380adbdd36b3116faaf9a4663e375325831dac1b519a44f9e439bb", - "sha256:24c7f8d4aee71bfa6401faeba367dd654f696a77151a8a28bc2013f7ced4af98", - 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"sha256:69a70d79a791fa1fd5f6e84b8b6dec2ec92369bde4ab2e18d43fc8a1825f51d1", + "sha256:8ac028cd9a6e1efe43f3dc36f708263838283535cc45430a98b9803f44f4c84b", + "sha256:a50cf3110a1914442e7b7b9cef394ef6bed0d801b8a34d56f4c4e927bbbcc7d0", + "sha256:c43d1beb098a1da15934262009a7120aac8dafa20d042b31dab48c28868eb5a4", + "sha256:c76a108272a4de63189b8f64086bbaf8348841d7e610b52f50959fbbf401524f", + "sha256:cbad4155028b8ca66aa19a8b13f593ebbf51bfb6c3f2685fe64f04d695a81864", + "sha256:e3c250faaf9979d0ec836d25e420428db37783fa5fed218da49c9fc06f80f51c", + "sha256:e61a089151f1ed78682aa77a3bcae0495cf8e585546c26924857d7e8a9960568", + "sha256:e9bbcc7b5c432600797981706f5b54611990c6a86b2e424329c995eea5f9c42b", + "sha256:fbddbb20f30308ba2546193d64e18c23b69f59d48cdef73676cbed803495c8dc", + "sha256:fc351cd2df318674669481eb978a7799f24fd14ef26987a1aa75105b0531d1a1" ], "index": "pypi", - "version": "==1.1.5" + "version": "==1.2.2" }, "pillow": { "hashes": [ @@ -509,6 +514,7 @@ "sha256:dd9eef866c70d2cbbea1ae58134eaffda0d4bfea403025f4db6859724b18ab3d", "sha256:f50e7a98b0453f39000619d845be8b06e611e56ee6e8186f7f60c3b1e2f0feae" ], + "markers": "python_version >= '3.6'", "version": "==8.1.0" }, "prometheus-client": { @@ -551,15 +557,37 @@ }, "pyasn1": { "hashes": [ + "sha256:014c0e9976956a08139dc0712ae195324a75e142284d5f87f1a87ee1b068a359", + "sha256:03840c999ba71680a131cfaee6fab142e1ed9bbd9c693e285cc6aca0d555e576", + "sha256:0458773cfe65b153891ac249bcf1b5f8f320b7c2ce462151f8fa74de8934becf", + "sha256:08c3c53b75eaa48d71cf8c710312316392ed40899cb34710d092e96745a358b7", "sha256:39c7e2ec30515947ff4e87fb6f456dfc6e84857d34be479c9d4a4ba4bf46aa5d", - "sha256:aef77c9fb94a3ac588e87841208bdec464471d9871bd5050a287cc9a475cd0ba" + "sha256:5c9414dcfede6e441f7e8f81b43b34e834731003427e5b09e4e00e3172a10f00", + "sha256:6e7545f1a61025a4e58bb336952c5061697da694db1cae97b116e9c46abcf7c8", + "sha256:78fa6da68ed2727915c4767bb386ab32cdba863caa7dbe473eaae45f9959da86", + "sha256:7ab8a544af125fb704feadb008c99a88805126fb525280b2270bb25cc1d78a12", + "sha256:99fcc3c8d804d1bc6d9a099921e39d827026409a58f2a720dcdb89374ea0c776", + "sha256:aef77c9fb94a3ac588e87841208bdec464471d9871bd5050a287cc9a475cd0ba", + "sha256:e89bf84b5437b532b0803ba5c9a5e054d21fec423a89952a74f87fa2c9b7bce2", + "sha256:fec3e9d8e36808a28efb59b489e4528c10ad0f480e57dcc32b4de5c9d8c9fdf3" ], "version": "==0.4.8" }, "pyasn1-modules": { "hashes": [ + "sha256:0845a5582f6a02bb3e1bde9ecfc4bfcae6ec3210dd270522fee602365430c3f8", + "sha256:0fe1b68d1e486a1ed5473f1302bd991c1611d319bba158e98b106ff86e1d7199", + "sha256:15b7c67fabc7fc240d87fb9aabf999cf82311a6d6fb2c70d00d3d0604878c811", + "sha256:426edb7a5e8879f1ec54a1864f16b882c2837bfd06eee62f2c982315ee2473ed", + "sha256:65cebbaffc913f4fe9e4808735c95ea22d7a7775646ab690518c056784bc21b4", "sha256:905f84c712230b2c592c19470d3ca8d552de726050d1d1716282a1f6146be65e", - "sha256:a50b808ffeb97cb3601dd25981f6b016cbb3d31fbf57a8b8a87428e6158d0c74" + 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