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The Returns and Example
for load_toposats.py do not reflect what is returned by the function which is image, pixel_to_nm_scaling, data.
I.e. the data is not included.
This looks like a change in the .topostats file specification and the way things are structured perhaps and has had a knock-on effect when working on Expand usage of AFMReader for all file formats.... The changes are in refactor(io): Load .spm with AFMReader but as of writing the tests/test_run_modules.py::test_run_topostats_process_all() and tests/test_run_modules.py::test_run_topostats_process_debug() are failing because process_scan() is now being passed a np.ndarray() rather than the expected dictionary.
What should be returned, image, pixel_to_nm_scaling or should it it include data? 🤔
The text was updated successfully, but these errors were encountered:
The
Returns
andExample
for
load_toposats.py
do not reflect what is returned by the function which isimage, pixel_to_nm_scaling, data
.I.e. the
data
is not included.This looks like a change in the
.topostats
file specification and the way things are structured perhaps and has had a knock-on effect when working on Expand usage of AFMReader for all file formats.... The changes are in refactor(io): Load .spm with AFMReader but as of writing thetests/test_run_modules.py::test_run_topostats_process_all()
andtests/test_run_modules.py::test_run_topostats_process_debug()
are failing becauseprocess_scan()
is now being passed anp.ndarray()
rather than the expected dictionary.What should be returned,
image
,pixel_to_nm_scaling
or should it it includedata
? 🤔The text was updated successfully, but these errors were encountered: